mRNA_M-pyrifera_M_contig84112.19623.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig84112.19623.1 vs. uniprot
Match: A0A7S4I8D0_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Vannella sp. CB-2014 TaxID=1487602 RepID=A0A7S4I8D0_9EUKA) HSP 1 Score: 110 bits (274), Expect = 5.530e-27 Identity = 64/168 (38.10%), Postives = 100/168 (59.52%), Query Frame = 1 Query: 100 LPLSSFRNLQANQSTARQLVTKLCNHAMKAKPPLGVVEWKGVIEALLILRKKVFTFISEQYCYSYFLEALLQVGQVELASEFVAKTNKGQSIVMKTAKEYFNSSASLGDPALLQARRCLALLPE----KAALAEVQLLDAVELVRRHFPSTQLLPVQVRLADKQELIE 591 +PL+SF NL +N +A QL+ ++C A K L +W ++ +L LR+K+F FIS +CYS F EALL +LA E++ KT K +I++K +KEYFNS+ D + A +C+ +L + A E L A +++ F + + +P+Q+RLADK ELI+ Sbjct: 1 MPLNSFLNLNSN--SASQLIQRICAQAGKTSAELTDKDWLEILSVILDLREKIFDFISVDFCYSCFCEALLYQQNFKLAREYLVKTAKAPTILLKVSKEYFNSATGPNDESFKYAEKCMEMLKKFDESPKAREERNLHKATKILYEQF-NYKKVPIQIRLADKYELIK 165
BLAST of mRNA_M-pyrifera_M_contig84112.19623.1 vs. uniprot
Match: A0A4W4GSC5_ELEEL (NBAS subunit of NRZ tethering complex n=1 Tax=Electrophorus electricus TaxID=8005 RepID=A0A4W4GSC5_ELEEL) HSP 1 Score: 106 bits (265), Expect = 3.430e-23 Identity = 69/207 (33.33%), Postives = 110/207 (53.14%), Query Frame = 1 Query: 28 LQDQVDELEVHLEANELLARYNLALPLSSFRNLQANQSTARQLVTKLCNHAMKAKPPLGVVEWKGVIEALLILRKKVFTFISEQYCYSYFLEALLQVGQVE---LASEFVAKTN-----------KGQSI-----------VMKTAKEYFNSSASLGDPALLQARRCLALLPEKAALAEVQLLDAVELVRRHFPSTQLLPVQVRLAD 573 L DQVD LE HL E+L ++ L P+ R+ Q+ + A QL+ KL HA + PPLG W+G++ LL +++ V+T + C+ F+E+LL G+ E LA + + + +G+++ V+ +A+EYFNS+A+L DP + AR CL L+ + L + +L L R ++LP+QVRL D Sbjct: 917 LHDQVDSLEKHLSVAEILEKHGLQKPIWYVRSSQSCREEAHQLLVKLTRHAARKSPPLGEAAWRGLLHDLLDMQRNVYTCLDPATCHQIFVESLLCSGREETVCLAGQLMQSSAAAPDAPAGPAFRGKALPRLGYACSVELVLASAREYFNSAATLSDPCIGLARSCLRLISDCPPLIQEELDLITALSRLEDFGVKVLPLQVRLRD 1123
BLAST of mRNA_M-pyrifera_M_contig84112.19623.1 vs. uniprot
Match: A0A4W4GV09_ELEEL (NBAS subunit of NRZ tethering complex n=4 Tax=Electrophorus electricus TaxID=8005 RepID=A0A4W4GV09_ELEEL) HSP 1 Score: 106 bits (265), Expect = 3.430e-23 Identity = 69/207 (33.33%), Postives = 110/207 (53.14%), Query Frame = 1 Query: 28 LQDQVDELEVHLEANELLARYNLALPLSSFRNLQANQSTARQLVTKLCNHAMKAKPPLGVVEWKGVIEALLILRKKVFTFISEQYCYSYFLEALLQVGQVE---LASEFVAKTN-----------KGQSI-----------VMKTAKEYFNSSASLGDPALLQARRCLALLPEKAALAEVQLLDAVELVRRHFPSTQLLPVQVRLAD 573 L DQVD LE HL E+L ++ L P+ R+ Q+ + A QL+ KL HA + PPLG W+G++ LL +++ V+T + C+ F+E+LL G+ E LA + + + +G+++ V+ +A+EYFNS+A+L DP + AR CL L+ + L + +L L R ++LP+QVRL D Sbjct: 917 LHDQVDSLEKHLSVAEILEKHGLQKPIWYVRSSQSCREEAHQLLVKLTRHAARKSPPLGEAAWRGLLHDLLDMQRNVYTCLDPATCHQIFVESLLCSGREETVCLAGQLMQSSAAAPDAPAGPAFRGKALPRLGYACSVELVLASAREYFNSAATLSDPCIGLARSCLRLISDCPPLIQEELDLITALSRLEDFGVKVLPLQVRLRD 1123
BLAST of mRNA_M-pyrifera_M_contig84112.19623.1 vs. uniprot
Match: A0A4W4GYP0_ELEEL (NBAS subunit of NRZ tethering complex n=1 Tax=Electrophorus electricus TaxID=8005 RepID=A0A4W4GYP0_ELEEL) HSP 1 Score: 106 bits (265), Expect = 3.430e-23 Identity = 69/207 (33.33%), Postives = 110/207 (53.14%), Query Frame = 1 Query: 28 LQDQVDELEVHLEANELLARYNLALPLSSFRNLQANQSTARQLVTKLCNHAMKAKPPLGVVEWKGVIEALLILRKKVFTFISEQYCYSYFLEALLQVGQVE---LASEFVAKTN-----------KGQSI-----------VMKTAKEYFNSSASLGDPALLQARRCLALLPEKAALAEVQLLDAVELVRRHFPSTQLLPVQVRLAD 573 L DQVD LE HL E+L ++ L P+ R+ Q+ + A QL+ KL HA + PPLG W+G++ LL +++ V+T + C+ F+E+LL G+ E LA + + + +G+++ V+ +A+EYFNS+A+L DP + AR CL L+ + L + +L L R ++LP+QVRL D Sbjct: 931 LHDQVDSLEKHLSVAEILEKHGLQKPIWYVRSSQSCREEAHQLLVKLTRHAARKSPPLGEAAWRGLLHDLLDMQRNVYTCLDPATCHQIFVESLLCSGREETVCLAGQLMQSSAAAPDAPAGPAFRGKALPRLGYACSVELVLASAREYFNSAATLSDPCIGLARSCLRLISDCPPLIQEELDLITALSRLEDFGVKVLPLQVRLRD 1137
BLAST of mRNA_M-pyrifera_M_contig84112.19623.1 vs. uniprot
Match: UPI0015D01DF6 (neuroblastoma-amplified sequence isoform X2 n=1 Tax=Electrophorus electricus TaxID=8005 RepID=UPI0015D01DF6) HSP 1 Score: 106 bits (265), Expect = 3.440e-23 Identity = 69/207 (33.33%), Postives = 110/207 (53.14%), Query Frame = 1 Query: 28 LQDQVDELEVHLEANELLARYNLALPLSSFRNLQANQSTARQLVTKLCNHAMKAKPPLGVVEWKGVIEALLILRKKVFTFISEQYCYSYFLEALLQVGQVE---LASEFVAKTN-----------KGQSI-----------VMKTAKEYFNSSASLGDPALLQARRCLALLPEKAALAEVQLLDAVELVRRHFPSTQLLPVQVRLAD 573 L DQVD LE HL E+L ++ L P+ R+ Q+ + A QL+ KL HA + PPLG W+G++ LL +++ V+T + C+ F+E+LL G+ E LA + + + +G+++ V+ +A+EYFNS+A+L DP + AR CL L+ + L + +L L R ++LP+QVRL D Sbjct: 1024 LHDQVDSLEKHLSVAEILEKHGLQKPIWYVRSSQSCREEAHQLLVKLTRHAARKSPPLGEAAWRGLLHDLLDMQRNVYTCLDPATCHQIFVESLLCSGREETVCLAGQLMQSSAAAPDAPAGPAFRGKALPRLGYACSVELVLASAREYFNSAATLSDPCIGLARSCLRLISDCPPLIQEELDLITALSRLEDFGVKVLPLQVRLQD 1230
BLAST of mRNA_M-pyrifera_M_contig84112.19623.1 vs. uniprot
Match: UPI00189115F6 (neuroblastoma-amplified sequence n=1 Tax=Pygocentrus nattereri TaxID=42514 RepID=UPI00189115F6) HSP 1 Score: 104 bits (259), Expect = 2.180e-22 Identity = 68/209 (32.54%), Postives = 113/209 (54.07%), Query Frame = 1 Query: 28 LQDQVDELEVHLEANELLARYNLALPLSSFRNLQANQSTARQLVTKLCNHAMKAKPPLGVVEWKGVIEALLILRKKVFTFISEQYCYSYFLEALLQVGQ---VELASEFVAKTNKGQSI----------------------VMKTAKEYFNSSASLGDPALLQARRCLALLPEKAALAEVQLLDAVELVRR--HFPSTQLLPVQVRLAD 573 L DQVD LE HL E+L ++ L P++ R+ Q+++ A QL+ KL H + PP+ W+ +++ LL +++ V+T + C+ F+E+LL G+ V+LA + + ++ Q + V+ +A+EYFNSSA+L DP + AR CL L+ + L + +L D + + R HF ++LP+QVRL D Sbjct: 1023 LHDQVDSLEKHLSVVEVLEKHGLQKPIAFIRSSQSSKEEAHQLMVKLTRHTGRKIPPVSESVWRDLLQDLLDMQRNVYTCLEPATCHEVFVESLLCSGREENVKLAGQLMQRSAVSQDVPVSAAFRGKATPRVAYTRSVELVLASAREYFNSSATLTDPCINLARSCLQLITDCPPLIQEEL-DLINTLSRLEHF-GVKVLPLQVRLRD 1229
BLAST of mRNA_M-pyrifera_M_contig84112.19623.1 vs. uniprot
Match: W5K3H8_ASTMX (NBAS subunit of NRZ tethering complex n=1 Tax=Astyanax mexicanus TaxID=7994 RepID=W5K3H8_ASTMX) HSP 1 Score: 103 bits (257), Expect = 4.030e-22 Identity = 67/209 (32.06%), Postives = 113/209 (54.07%), Query Frame = 1 Query: 28 LQDQVDELEVHLEANELLARYNLALPLSSFRNLQANQSTARQLVTKLCNHAMKAKPPLGVVEWKGVIEALLILRKKVFTFISEQYCYSYFLEALLQVGQ---VELASEFVAKTNKGQSI----------------------VMKTAKEYFNSSASLGDPALLQARRCLALLPE--KAALAEVQLLDAVELVRRHFPSTQLLPVQVRLAD 573 L DQVD LE HL E+L ++ L P+S R+ Q+++ A QL+ KL H + PP+ W+ +++ LL +++ V++ + C+ F+E+LL G+ V+LA + + +++ Q + V+ +A+EYFNSSA+L DP + AR CL L+ + E+ L+ A+ + HF ++LP+QVRL D Sbjct: 940 LHDQVDSLEKHLSVAEVLEKHGLQKPISYVRSSQSSKEEAYQLMVKLTRHTGRKNPPVSESVWRDLLQDLLDMQQNVYSCLEPATCHQVFVESLLCSGREENVKLAGQLMQRSSMSQDVPGSTAFRGKAPPRVAYARSVELVLASAREYFNSSATLNDPCINLARSCLQLITDCPPPIQEELDLISALSQLE-HF-GVKVLPLQVRLRD 1146
BLAST of mRNA_M-pyrifera_M_contig84112.19623.1 vs. uniprot
Match: UPI000BBD6970 (neuroblastoma-amplified sequence n=1 Tax=Astyanax mexicanus TaxID=7994 RepID=UPI000BBD6970) HSP 1 Score: 103 bits (257), Expect = 4.050e-22 Identity = 67/209 (32.06%), Postives = 113/209 (54.07%), Query Frame = 1 Query: 28 LQDQVDELEVHLEANELLARYNLALPLSSFRNLQANQSTARQLVTKLCNHAMKAKPPLGVVEWKGVIEALLILRKKVFTFISEQYCYSYFLEALLQVGQ---VELASEFVAKTNKGQSI----------------------VMKTAKEYFNSSASLGDPALLQARRCLALLPE--KAALAEVQLLDAVELVRRHFPSTQLLPVQVRLAD 573 L DQVD LE HL E+L ++ L P+S R+ Q+++ A QL+ KL H + PP+ W+ +++ LL +++ V++ + C+ F+E+LL G+ V+LA + + +++ Q + V+ +A+EYFNSSA+L DP + AR CL L+ + E+ L+ A+ + HF ++LP+QVRL D Sbjct: 1027 LHDQVDSLEKHLSVAEVLEKHGLQKPISYVRSSQSSKEEAYQLMVKLTRHTGRKNPPVSESVWRDLLQDLLDMQQNVYSCLEPATCHQVFVESLLCSGREENVKLAGQLMQRSSMSQDVPGSTAFRGKAPPRVAYARSVELVLASAREYFNSSATLNDPCINLARSCLQLITDCPPPIQEELDLISALSQLE-HF-GVKVLPLQVRLRD 1233
BLAST of mRNA_M-pyrifera_M_contig84112.19623.1 vs. uniprot
Match: UPI001FEE3E3F (NBAS subunit of NRZ tethering complex isoform X1 n=2 Tax=Tachysurus fulvidraco TaxID=1234273 RepID=UPI001FEE3E3F) HSP 1 Score: 102 bits (254), Expect = 1.020e-21 Identity = 68/208 (32.69%), Postives = 108/208 (51.92%), Query Frame = 1 Query: 28 LQDQVDELEVHLEANELLARYNLALPLSSFRNLQANQSTARQLVTKLCNHAMKAKPPLGVVEWKGVIEALLILRKKVFTFISEQYCYSYFLEALLQVGQVE-------------------LASEFVAKTNK-----GQSIVMKTAKEYFNSSASLGDPALLQARRCLALLPE--KAALAEVQLLDAVELVRRHFPSTQLLPVQVRLAD 573 L DQVD LE HL E+L ++ L P+S R+ Q+++ A QL+ KL H + KPP W+ +++ LL +++ V+T + C+ F+E+LL G+ E + S F KT + + + +A+EYFNSSA+L DP + AR CL L+ + + E+ L+ A+ R ++LP+QVRL D Sbjct: 1025 LHDQVDSLEKHLSVAEVLEKHCLQKPISYIRSSQSSKEEAHQLMVKLTRHVGRKKPPASESVWRDLLQDLLDMQQNVYTCLQPATCHQVFVESLLCSGREENVLLAGQLMQRGSSGPLTPVGSAFRVKTTRVPYTHSVELALASAREYFNSSATLSDPCINLARSCLQLITDCPPSIQEELDLISALS--RLEDFGVKVLPLQVRLRD 1230
BLAST of mRNA_M-pyrifera_M_contig84112.19623.1 vs. uniprot
Match: A0A2D0T1M5_ICTPU (neuroblastoma-amplified sequence n=6 Tax=Siluroidei TaxID=1489793 RepID=A0A2D0T1M5_ICTPU) HSP 1 Score: 102 bits (253), Expect = 1.390e-21 Identity = 65/208 (31.25%), Postives = 109/208 (52.40%), Query Frame = 1 Query: 28 LQDQVDELEVHLEANELLARYNLALPLSSFRNLQANQSTARQLVTKLCNHAMKAKPPLGVVEWKGVIEALLILRKKVFTFISEQYCYSYFLEALLQVGQVE---LASEFVAKTNK---------------------GQSIVMKTAKEYFNSSASLGDPALLQARRCLALLPE--KAALAEVQLLDAVELVRRHFPSTQLLPVQVRLAD 573 L DQVD LE HL E+L ++ L P++ RN Q+++ A QL+ KL H + PP+ W+ +++ LL +++ V+T + C+ F+E+LL G+ E LA + + +++ + + +A+EYFNSSA+L DP + AR CL L+ + + E+ L+ A+ R ++LP+QVRL D Sbjct: 1024 LHDQVDSLEKHLSVAEVLEKHGLQKPIAFIRNSQSSREEAHQLMVKLTRHTGRKNPPVSESVWRALLQDLLDMQQNVYTCLQPATCHQVFVESLLCSGREENVLLAGQLMQRSSSVPVPPVGPASRVKAACVPYAHSVDLALASAREYFNSSATLSDPCISLARSCLQLITDCPPSVQDELDLISALS--RLEDFGVKVLPLQVRLRD 1229 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig84112.19623.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig84112.19623.1 >prot_M-pyrifera_M_contig84112.19623.1 ID=prot_M-pyrifera_M_contig84112.19623.1|Name=mRNA_M-pyrifera_M_contig84112.19623.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=197bp MIRSARYQQLQDQVDELEVHLEANELLARYNLALPLSSFRNLQANQSTARback to top mRNA from alignment at M-pyrifera_M_contig84112:12..602- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig84112.19623.1 ID=mRNA_M-pyrifera_M_contig84112.19623.1|Name=mRNA_M-pyrifera_M_contig84112.19623.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=591bp|location=Sequence derived from alignment at M-pyrifera_M_contig84112:12..602- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig84112:12..602- >mRNA_M-pyrifera_M_contig84112.19623.1 ID=mRNA_M-pyrifera_M_contig84112.19623.1|Name=mRNA_M-pyrifera_M_contig84112.19623.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1182bp|location=Sequence derived from alignment at M-pyrifera_M_contig84112:12..602- (Macrocystis pyrifera P11B4 male)back to top |