mRNA_M-pyrifera_M_contig84111.19622.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig84111.19622.1 vs. uniprot
Match: A0A7S4MFY2_9EUKA (Hypothetical protein n=1 Tax=Vannella sp. CB-2014 TaxID=1487602 RepID=A0A7S4MFY2_9EUKA) HSP 1 Score: 100 bits (248), Expect = 1.110e-22 Identity = 51/118 (43.22%), Postives = 67/118 (56.78%), Query Frame = 1 Query: 4 TIGRLWAQLSLYEKTKGVVLLSWAMLTGLSATEEDIEDLKKSDFLEEAIAEVTRIFPSVAEAILAERDLFLADSIRQCPGNTIVAVVGKGHAAGIEQQWGTAVDRAALLHVPKSEPGL 357 T R WA LS YEK K + + ++ G + E++E LK D + E + E+ + FP E I+ ERD FL SIR CPG+ +V VVG GH GIE W +DRA LL +P GL Sbjct: 155 TFKRTWANLSSYEKLKIFCAIVYVLVMGPTIDAEEVEKLKNGDIMTEMMEEMAQKFPGTLETIVYERDRFLTGSIRDCPGDIVVGVVGLGHLKGIEANWEKEIDRAKLLVIPSKSKGL 272
BLAST of mRNA_M-pyrifera_M_contig84111.19622.1 vs. uniprot
Match: A0A7X6XBN9_9FIRM (TraB family protein (Fragment) n=1 Tax=Erysipelothrix sp. TaxID=38403 RepID=A0A7X6XBN9_9FIRM) HSP 1 Score: 90.5 bits (223), Expect = 3.380e-19 Identity = 50/132 (37.88%), Postives = 79/132 (59.85%), Query Frame = 1 Query: 4 TIGRLWAQLSLYEKTKGVVLLSWAMLTGLSATEEDIEDLKKSDFLEEAIAEVTRIFPSVAEAILAERDLFLADSIRQCPGNTIVAVVGKGHAAGI-EQQWGTAVDRAALLHVPKSEPGLVARAVSWCFSTTI 396 T R+W+ LS +EK K + L+ ++ +EE IE++K+ D L+ A+ EV+ FP+VAE ++ ERD ++A SI+ PGN IV V+G HA GI + G +D +AL + EP +++ V W +I Sbjct: 123 TFKRIWSLLSFWEKLKLIALVIGSLFENEEISEETIEEMKQQDILDSALKEVSTEFPTVAEVLIFERDRYMAQSIKNSPGNKIVVVIGAAHAPGIIKHLHGEDIDISALEVI--KEPSWLSKQVKWLLPVSI 252
BLAST of mRNA_M-pyrifera_M_contig84111.19622.1 vs. uniprot
Match: A0A1V5X6N5_9DELT (TraB family protein n=1 Tax=Deltaproteobacteria bacterium ADurb.Bin207 TaxID=1852869 RepID=A0A1V5X6N5_9DELT) HSP 1 Score: 89.7 bits (221), Expect = 2.380e-18 Identity = 50/113 (44.25%), Postives = 64/113 (56.64%), Query Frame = 1 Query: 1 ATIGRLWAQLSLYEKTKGVVLLSWAMLTGLSATEEDIEDLKKSDFLEEAIAEVTRIFPSVAEAILAERDLFLADSIRQCPGNTIVAVVGKGHAAGIEQQWGTAVDRAALLHVP 339 AT+ R WA LSL+ K + LL A+ + TEE IE+LK+ D L E + E P V E ++ ERD FL SIR+ PG T+VAVVG H G+ VDR AL +P Sbjct: 128 ATLKRTWAALSLWNKARVAALLMVALTSKEEITEERIEELKERDTLNETLQEFAEALPQVKEPLIDERDRFLISSIREAPGETVVAVVGAAHVQGMVSNLEATVDRDALSVIP 240
BLAST of mRNA_M-pyrifera_M_contig84111.19622.1 vs. uniprot
Match: A0A848Z7N2_9DELT (TraB/GumN family protein n=1 Tax=Desulfobacteraceae bacterium TaxID=2049433 RepID=A0A848Z7N2_9DELT) HSP 1 Score: 87.4 bits (215), Expect = 1.680e-17 Identity = 49/135 (36.30%), Postives = 75/135 (55.56%), Query Frame = 1 Query: 4 TIGRLWAQLSLYEKTKGVVLLSWAMLTGLSATEEDIEDLKKSDFLEEAIAEVTRIFPSVAEAILAERDLFLADSIRQCPGNTIVAVVGKGHAAGIEQQWGTAVDRAALLHVP-KSEPGLVARAVSWCFSTTIGAL 405 T+ R W + ++EK K + L ++ E D+E +K+ D L+ +AEV + P++ A++ ERD +LA+ IR PG+TIVA VG GH GI++ W +D + L P K + GL + W IGAL Sbjct: 132 TLSRAWGIMGIWEKIKLIFQLVLSLGDATDIDEADVEKMKEQDMLDSVLAEVGKSHPAIRNALIDERDKYLAEKIRTAPGDTIVAAVGAGHVPGIKRYWNDEIDISELDQRPRKKKSGLFFK---WFIPLFIGAL 263
BLAST of mRNA_M-pyrifera_M_contig84111.19622.1 vs. uniprot
Match: A0A2N2A8E9_9FIRM (TraB family protein (Fragment) n=1 Tax=Firmicutes bacterium HGW-Firmicutes-6 TaxID=2013787 RepID=A0A2N2A8E9_9FIRM) HSP 1 Score: 86.7 bits (213), Expect = 2.130e-17 Identity = 48/131 (36.64%), Postives = 75/131 (57.25%), Query Frame = 1 Query: 4 TIGRLWAQLSLYEKTKGVVLLSWAMLTGLSATEEDIEDLKKSDFLEEAIAEVTRIFPSVAEAILAERDLFLADSIRQCPGNTIVAVVGKGHAAGIEQQWGTAVDRAALLHVPKSEPGLVARAVSWCFSTTI 396 T R+W L L+EK K + L +M + TE +E+LK+SD +E A+ EV FPS+ + ++ ERD ++A SI+Q PG+T+VA++G HA GI ++ L +P E +++A W T I Sbjct: 140 TFMRIWRSLGLWEKVKLLTALISSMFSEEEITEAKLEELKQSDMIELALKEVGGKFPSIKKGLVDERDQYMAQSIKQAPGDTVVAIIGAAHAPGIIRELNNTNSLVELDKIP--EQSWLSKASGWLIPTMI 268
BLAST of mRNA_M-pyrifera_M_contig84111.19622.1 vs. uniprot
Match: A0A847PFW1_9BACT (TraB/GumN family protein n=1 Tax=Candidatus Atribacteria bacterium TaxID=2053509 RepID=A0A847PFW1_9BACT) HSP 1 Score: 86.7 bits (213), Expect = 3.240e-17 Identity = 47/118 (39.83%), Postives = 67/118 (56.78%), Query Frame = 1 Query: 4 TIGRLWAQLSLYEKTKGVVLLSWAMLTGLSATEEDIEDLKKSDFLEEAIAEVTRIFPSVAEAILAERDLFLADSIRQCPGNTIVAVVGKGHAAGIEQQWGTAVDRAALLHVPKSEPGL 357 T R+W +L + K K +L ++ + TEE+IE LK D L A+ E+ FP + ++ ERD +LA+ I+ PGN IVAVVG GH GI+++ D AL +PKS P L Sbjct: 130 TFTRIWKKLGFFGKLKLFFMLILSIFSNEEITEEEIEKLKSEDVLTAALNELAVSFPRLKSTLIDERDQYLAEKIKNAPGNRIVAVVGAGHIPGIKEEIHKEHDLTALTFIPKSSPWL 247
BLAST of mRNA_M-pyrifera_M_contig84111.19622.1 vs. uniprot
Match: A0A7V5XBE5_9GAMM (TraB/GumN family protein n=1 Tax=Chromatiales bacterium TaxID=2026725 RepID=A0A7V5XBE5_9GAMM) HSP 1 Score: 86.3 bits (212), Expect = 4.420e-17 Identity = 49/134 (36.57%), Postives = 73/134 (54.48%), Query Frame = 1 Query: 4 TIGRLWAQLSLYEKTKGVVLLSWAMLTGLSATEEDIEDLKKSDFLEEAIAEVTRIFPSVAEAILAERDLFLADSIRQCPGNTIVAVVGKGHAAGIEQQWGTAVDRAALLHVPKSEPGLVARAVSWCFSTTIGAL 405 T+ R WA + + L+ ++ T +E++IE LK SD L + E + PSV +A++ ERD +LA+ I PG T+VAVVG GH GI + +GTA+D AAL +P P + R + W + L Sbjct: 130 TLKRAWAGAGFGALLRMIWSLTLSLFTSEEISEQEIEKLKGSDELAVMLDEFSGALPSVKQALIDERDAYLAEKIHAAPGQTVVAVVGAGHVPGIRRLFGTAIDMAALEQIPP--PRRLFRIIGWAVPVLLAGL 261
BLAST of mRNA_M-pyrifera_M_contig84111.19622.1 vs. uniprot
Match: A0A1W1H7C1_9DELT (TraB n=2 Tax=Desulfamplus magnetovallimortis TaxID=1246637 RepID=A0A1W1H7C1_9DELT) HSP 1 Score: 84.7 bits (208), Expect = 1.940e-16 Identity = 48/133 (36.09%), Postives = 77/133 (57.89%), Query Frame = 1 Query: 4 TIGRLWAQLSLYEKTKGVVLLSWAMLTGLSATEEDIEDLKKSDFLEEAIAEVTRIFPSVAEAILAERDLFLADSIRQCPGNTIVAVVGKGHAAGIEQQWGTA--VDRAALLHVPKSEPGLVARAVSWCFSTTI 396 T+ R+W + L+EK K + L ++ + TEEDIE++KK D L+ +A+V + P + + ++ ERD +L+ IR PGNTIVAVVG GH AGI++ + + + L +P G + + + W T I Sbjct: 170 TLARVWRSMGLWEKLKLMFQLLMSVGSSEEITEEDIEEMKKEDILQTLLADVKKSHPIMEKVLIDERDQYLSAKIRNAPGNTIVAVVGAGHLAGIKRYMASEKEISTSELDALPPG--GNLGKMLKWAIPTLI 300
BLAST of mRNA_M-pyrifera_M_contig84111.19622.1 vs. uniprot
Match: A0A1W9PWM9_9DELT (Conjugal transfer protein TraB n=1 Tax=Desulfococcus sp. 4484_241 TaxID=1968522 RepID=A0A1W9PWM9_9DELT) HSP 1 Score: 84.0 bits (206), Expect = 3.020e-16 Identity = 50/134 (37.31%), Postives = 73/134 (54.48%), Query Frame = 1 Query: 4 TIGRLWAQLSLYEKTKGVVLLSWAMLTGLSATEEDIEDLKKSDFLEEAIAEVTRIFPSVAEAILAERDLFLADSIRQCPGNTIVAVVGKGHAAGIEQQWGTAVDRAALLHVPKSEPGLVARAVSWCFSTTIGAL 405 T+ R W + L+ K K +V ++L TEED+E LK+ D L+ +AE P + + ++ ERD +LA SIR PG +VAVVG GH AGI + W +++D +L +P G V V W I A+ Sbjct: 130 TLARAWRSMGLWGKLKLMVHAIASILGADDITEEDVEKLKQEDMLQAVLAEFEASHPVLRKILIDERDQYLAHSIRNAPGQRVVAVVGAGHMAGICRYWDSSIDVESLKALPPRGIGHV--MVKWSIPALIVAV 261
BLAST of mRNA_M-pyrifera_M_contig84111.19622.1 vs. uniprot
Match: A0A6J4Y8D8_9DELT (Pheromone shutdown protein n=1 Tax=Olavius algarvensis Delta 1 endosymbiont TaxID=334747 RepID=A0A6J4Y8D8_9DELT) HSP 1 Score: 82.0 bits (201), Expect = 3.450e-16 Identity = 44/112 (39.29%), Postives = 64/112 (57.14%), Query Frame = 1 Query: 4 TIGRLWAQLSLYEKTKGVVLLSWAMLTGLSATEEDIEDLKKSDFLEEAIAEVTRIFPSVAEAILAERDLFLADSIRQCPGNTIVAVVGKGHAAGIEQQWGTAVDRAALLHVP 339 T+ R W + + K K V L ++ EEDIE +K+ D LE +AEV + P + + ++ ERD +LA+ IR PGN IVAVVG GH GI++ W +D +L +P Sbjct: 132 TLSRTWRAMGFWGKIKLVFQLVLSLGEVDDIKEEDIEKMKQEDVLESLLAEVGKSLPVLRDILIDERDQYLAEKIRNAPGNKIVAVVGAGHVPGIQKYWNKNIDIQSLEKLP 243 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig84111.19622.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig84111.19622.1 >prot_M-pyrifera_M_contig84111.19622.1 ID=prot_M-pyrifera_M_contig84111.19622.1|Name=mRNA_M-pyrifera_M_contig84111.19622.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=146bp ATIGRLWAQLSLYEKTKGVVLLSWAMLTGLSATEEDIEDLKKSDFLEEAIback to top mRNA from alignment at M-pyrifera_M_contig84111:3..601+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig84111.19622.1 ID=mRNA_M-pyrifera_M_contig84111.19622.1|Name=mRNA_M-pyrifera_M_contig84111.19622.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=599bp|location=Sequence derived from alignment at M-pyrifera_M_contig84111:3..601+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig84111:3..601+ >mRNA_M-pyrifera_M_contig84111.19622.1 ID=mRNA_M-pyrifera_M_contig84111.19622.1|Name=mRNA_M-pyrifera_M_contig84111.19622.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=876bp|location=Sequence derived from alignment at M-pyrifera_M_contig84111:3..601+ (Macrocystis pyrifera P11B4 male)back to top |