mRNA_M-pyrifera_M_contig8408.19619.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig8408.19619.1 vs. uniprot
Match: D8LBZ1_ECTSI (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBZ1_ECTSI) HSP 1 Score: 425 bits (1092), Expect = 4.090e-132 Identity = 297/514 (57.78%), Postives = 344/514 (66.93%), Query Frame = 1
Query: 1 QGCSEPAKFLLRCFDAVGHFLELEGEEANSPIEEGGMFASDIGGSSRSXXXXXXXXXXXXXXXXXXXXXXXXXXXSRRALDWKSGRQAAVAMSIDDAEEKRGSGLGRGSGVAAGRGRMSQDVAEEKSPARGGVGMEAEEKSMLEKENDPRFSRATPHELSTLAVNAVVVGP----PSAKVQERFPRLASAVRIQQCLSVLGDNPVTQHLQSFAFSSSSSPSGGGVSSERVGGGQGETKSPXXXXXXXXXXXXXXXXXXFPSEEKKV--RGGGGRXXXXRGLNQVLFVGDTRILEVSTGVDCSCIKVMCKAVAGVPWAEVQADALVIANTADAILIPVLASPSLSRSFCAVKLLTDAAFAHLCLGNAEDALRAVRRFSAILKDFPGIMRRVFPPWRHCVHWMAGMLESAGLRNLYEGLREGLKLISMKSMPTLPDFGEGAHDIMCKCSHFRCQAVHRALAEHAARDPFGAFHVPDNCPHYGTTRRAAKTKGAAGV-FRSGNDSSKWAAKLRSVGS 1521
QGCSEPAKFLL+CFDA+ HFLELEGEE+NSPIE G+ A + + SXXXXXXXXXXXXXXXXXXXXXXXXXXX + GR A + E G EKEN+PR + +ELSTL A++ G PSA E FP L SAVR+Q+C+SVLGDNPV +HL +FA SS+++ G XXXXXXXXXXXXXXXXXX GGGG NQVLFVGDTRILEVS GVDCSCI VMCKAVAG PWAE++ DA ++ANTADAIL+PVLASPS+SRS CAVKLL ++AF+HLCLGNAE A+RAVRRFSAILK+FPGI+R FPPWRHC HWMAGMLESAGLR+LY+GLR+GL I+MKSM LP+FG+GAHDIMCKCSHFRCQA HRALAEHA DPFG FH+P +CP +G AA G FR+ ++S+WAAKL +V S
Sbjct: 334 QGCSEPAKFLLKCFDAMSHFLELEGEESNSPIE--GIIAPPLAHGASSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDEMGRTGGRARAGARIAEDNGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGCKEKENEPRM--LSQNELSTLKEKAILAGALRSNPSALAYEEFPGLKSAVRVQECISVLGDNPVAKHLGNFALSSAAAKEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSFEAGGGGLKFPPLKTNQVLFVGDTRILEVSMGVDCSCISVMCKAVAGKPWAEIKEDARIVANTADAILVPVLASPSISRSVCAVKLLANSAFSHLCLGNAEYAMRAVRRFSAILKEFPGIVR--FPPWRHCFHWMAGMLESAGLRDLYDGLRDGLATINMKSMRNLPEFGKGAHDIMCKCSHFRCQATHRALAEHAKLDPFGFFHIPHHCPQFGPAAEAAAASGGKSTTFRAVREASEWAAKLSTVDS 841
BLAST of mRNA_M-pyrifera_M_contig8408.19619.1 vs. uniprot
Match: A0A6H5JQB9_9PHAE (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQB9_9PHAE) HSP 1 Score: 423 bits (1087), Expect = 1.240e-131 Identity = 302/522 (57.85%), Postives = 352/522 (67.43%), Query Frame = 1
Query: 1 QGCSEPAKFLLRCFDAVGHFLELEGEEANSPIEEGGMFASDI--GGSSRSXXXXXXXXXXXXXXXXXXXXXXXXXXXSRRALDWKSGRQAAVAMSIDDAEEKRGSGLGRGSGVAAGRGRMSQDVAEEKSPARGGV------GMEAEEKSMLEKENDPRFSRATPHELSTLAVNAVVVGP----PSAKVQERFPRLASAVRIQQCLSVLGDNPVTQHLQSFAFSSSSSPSG-GGVSSERVGGGQGETKSPXXXXXXXXXXXXXXXXXXFPSEEKKVRGGGGRXXXXRGLNQVLFVGDTRILEVSTGVDCSCIKVMCKAVAGVPWAEVQADALVIANTADAILIPVLASPSLSRSFCAVKLLTDAAFAHLCLGNAEDALRAVRRFSAILKDFPGIMRRV-FPPWRHCVHWMAGMLESAGLRNLYEGLREGLKLISMKSMPTLPDFGEGAHDIMCKCSHFRCQAVHRALAEHAARDPFGAFHVPDNCPHYGTTRRAAKTKGAAGV-FRSGNDSSKWAAKLRSVGS 1521
QGCSEPAKFLL+CFDA+ HFLELEGEE+NSPI G+ A + G SS XXXXXXXXXXXXXXXXXXXXXXXXXXX D + G+ A + E GS SGV Q + G A EKEN+PR + +ELSTL A++ G PSA E FP L SAV +Q+C+SVLGDNPV +HL +FA SS+++ G XXXXXXXXXXXXXXXXXX GG NQVLFVGDTRILEVS GVDCSCI VMCKAVAG PWAE++ DA +ANTADAIL+PVLASP++SRS CAVKLL ++AF+HLCLGNAE A+RAVRRFSAIL++FPGI+RR FPPWRHC HWMAGMLESAGLR+LY+GLR+GL I+MKSM LP+FG+GAHDIMCKCSHFRCQA HRALAEHA DPFG+FH+P +CP +G AA G FR+G ++S+WAAKL +V S
Sbjct: 297 QGCSEPAKFLLKCFDAMSHFLELEGEESNSPIT--GIVAPPLARGASSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDDEMGQTGGRARAGARIAEDNGS-----SGVXXXXXXXWQSRSXXXXXXXXXXXXXXSPGAAAAAAGCKEKENEPRM--LSQNELSTLKEKAILAGALRSNPSALAHEEFPGLKSAVLVQECISVLGDNPVAKHLGNFALSSAAAKKGQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDNSDGGLEFPPMKTNQVLFVGDTRILEVSMGVDCSCISVMCKAVAGKPWAEIKEDARDVANTADAILVPVLASPTISRSVCAVKLLANSAFSHLCLGNAEAAMRAVRRFSAILEEFPGIVRRTGFPPWRHCFHWMAGMLESAGLRDLYDGLRDGLATINMKSMRNLPEFGKGAHDIMCKCSHFRCQATHRALAEHAKLDPFGSFHIPHHCPQFGPAAEAAAASGGKSTTFRAGREASEWAAKLSTVDS 809
BLAST of mRNA_M-pyrifera_M_contig8408.19619.1 vs. uniprot
Match: A0A835ZDD0_9STRA (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDD0_9STRA) HSP 1 Score: 59.7 bits (143), Expect = 1.470e-5 Identity = 45/130 (34.62%), Postives = 60/130 (46.15%), Query Frame = 1
Query: 1009 LSRSFCAVKLLTDAAFAHLCLGNAEDALRAVRRFSAILKDFPGIMRRVFPPWRHCVHWMAGMLESAGLRNLYEGLREGLKLISMKS-MPTLPDFGEGAHDI-MCKCSHFRCQAVHRALAEHAARDPFGAF 1392
L R C ++ AA A L L + L + R +L PG++ P RH VHW+ +L SAGL Y L +S+ S + TLP+ MC CSH RC AV R LA+ +R F
Sbjct: 512 LLRLVCGDEVGGAAAAASLSLSAEDACLALLLRMKRMLCHTPGLLHT--PSRRHNVHWLGALLLSAGLIADYSDLARTYNELSLASGLDTLPEAPTAEDKTRMCLCSHPRCAAVQRLLADQLSRGTARVF 639 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig8408.19619.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 3
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig8408.19619.1 >prot_M-pyrifera_M_contig8408.19619.1 ID=prot_M-pyrifera_M_contig8408.19619.1|Name=mRNA_M-pyrifera_M_contig8408.19619.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=591bp QGCSEPAKFLLRCFDAVGHFLELEGEEANSPIEEGGMFASDIGGSSRSNSback to top mRNA from alignment at M-pyrifera_M_contig8408:530..11080+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig8408.19619.1 ID=mRNA_M-pyrifera_M_contig8408.19619.1|Name=mRNA_M-pyrifera_M_contig8408.19619.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=10551bp|location=Sequence derived from alignment at M-pyrifera_M_contig8408:530..11080+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig8408:530..11080+ >mRNA_M-pyrifera_M_contig8408.19619.1 ID=mRNA_M-pyrifera_M_contig8408.19619.1|Name=mRNA_M-pyrifera_M_contig8408.19619.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=3546bp|location=Sequence derived from alignment at M-pyrifera_M_contig8408:530..11080+ (Macrocystis pyrifera P11B4 male)back to top |