mRNA_M-pyrifera_M_contig84064.19613.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig84064.19613.1 vs. uniprot
Match: A0A813CNA6_9DINO (USP9X protein n=2 Tax=Symbiodinium TaxID=2949 RepID=A0A813CNA6_9DINO) HSP 1 Score: 258 bits (658), Expect = 1.900e-74 Identity = 137/286 (47.90%), Postives = 178/286 (62.24%), Query Frame = 1 Query: 13 EDSLLWQLQLMFANLQESQQQAYNPAGYTRAFKDWDGNPINTSEQRDASEYLTELFQKIEAGTQGTPQEDMLRRTLGGTVANELIAGDGMQYRANIEDFYFMSVPVKGHQSLQEGLKAA-ATGDVIEGYSGWEDADGNGLPPMDTTKRTSIKSAAPHLILHLRRFDFDFDVGMQVKLNDFFSFPRKLDLWPYTVEGRPDAVVAGEGGGGEGSAGTGARRIRSPEEAEEAADLGVGHTGNPYADTDMEREDWHYELVGMVIHSGTAQAGHYYSYSQERDDTGPTNRW 867 EDS+ Q+Q M ANLQE+Q++AYNP G A +DWDGNPIN EQRDASEYLT+LF K+E G+ Q +++ LGG A+E IA YRA FY++S V+ ++SL+E L+ GD++EGY +D L DT +RTS++ HLI+H +R D D + G+ VKLN F FP +L+LWPYTV+GR DAV EG +RR+ PE+ G N YA TD ED+ Y+LVGMVIH+GTA +GHY+SY QER GPT RW Sbjct: 2437 EDSVTHQVQRMLANLQETQRRAYNPRGLCMALRDWDGNPINVMEQRDASEYLTQLFDKLETEMAGSKQASIIKDVLGGETASEFIADGARMYRARTTPFYYLSATVRHYKSLEESLRREFGAGDMMEGYRWEDDKTEADLGRFDTIRRTSLRKGPKHLIVHFKRLDIDVERGIPVKLNSRFEFPHRLNLWPYTVQGRADAVKGREG----------SRRVVDPEDPATHVAPGSEDDCNDYA-TDEGPEDFEYQLVGMVIHTGTATSGHYFSYVQERGADGPTGRW 2711
BLAST of mRNA_M-pyrifera_M_contig84064.19613.1 vs. uniprot
Match: A0A7S1UJ59_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UJ59_9STRA) HSP 1 Score: 210 bits (535), Expect = 9.700e-62 Identity = 124/298 (41.61%), Postives = 177/298 (59.40%), Query Frame = 1 Query: 1 EDEREDSLLWQLQLMFANLQESQQQAYNPAGYTRAFKDWDGNPINTSEQRDASEYLTELFQKIEAGTQGTPQEDMLRRTLGGTVANELIAGDGMQYRANIEDFYFMSVPVKGHQSLQEGLKAAATGDVIEGYSGWED----ADGNG-----LPPMDTTKRTSIKSAAPHLILHLRRFDFDFDVGMQVKLNDFFSFPRKLDLWPYTVEGRPDAVVAGEGGGGEGSAGTGARRIRSPEEAEEAADLGVGHTGNPYADTDMEREDWHYELVGMVIHSGTAQAGHYYSYSQERDDTGPTNRW 867 ED ED L++QLQ MFA+LQ S++ +YNP +T AF+DWD PI+ Q+DASE+ + L K+E GT E++LR T+ GTV+ EL+A +YRA + FY + VP++ +SL+E + G+ +E Y+ WE+ AD NG ++TTKR S+K PHL++HL+RFDFD++ QVKLND+F FP +D+ +T +GR DA + G G+ G G + G G YA + + + YEL G+VIH GTA +GHYYSY +ERD N+W Sbjct: 101 EDAAED-LIFQLQNMFAHLQNSEKASYNPRAFTNAFRDWDNMPIDVLVQQDASEFFSNLLTKLEGKLMGTEFENLLRDTVQGTVSQELLA-QPEKYRAREDVFYLIEVPIQNLRSLEESMHKFIEGETVE-YT-WEEESGEADENGEKVVRKETLNTTKRLSLKKLPPHLVIHLKRFDFDYETFQQVKLNDYFEFPTDMDMREFTQDGRADATPLDQRGKGDKDGGEG--------------EGGAGSDAEEYAA--LPDDYFQYELTGIVIHMGTANSGHYYSYIRERDSD---NKW 375
BLAST of mRNA_M-pyrifera_M_contig84064.19613.1 vs. uniprot
Match: I2CRD3_NANGC (Ubiquitin carboxyl-terminal hydrolase 7 n=2 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CRD3_NANGC) HSP 1 Score: 205 bits (522), Expect = 2.730e-56 Identity = 118/284 (41.55%), Postives = 170/284 (59.86%), Query Frame = 1 Query: 1 EDEREDSLLWQLQLMFANLQESQQQAYNPAGYTRAFKDWDGNPINTSEQRDASEYLTELFQKIEAGTQGTPQEDMLRRTLGGTVANELIAGDGMQYRANIEDFYFMSVPVKGHQSLQEGLKAAATGDVIEGYSGWEDAD---GNGLPPMD-TTKRTSIKSAAPHLILHLRRFDFDFDVGMQVKLNDFFSFPRKLDLWPYTVEGRPDAVVAGEGGGGEGSAGTGARRIRSPEEAEEAADLGVGHTGNPYADTDMEREDWHYELVGMVIHSGTAQAGHYYSYSQER 840 E+++E+SL++QLQ +FA+LQES + YNP G+ A KDWDG P + Q+D S++L FQ++E TQGT E++LR GGT+ +ELIA +G +Y + +E YF+SV V+ Q+L + L+A + +++ Y+ WE D G + T KR S+ + HLILHL+RF+FD++ Q+K+ND FP LD++PYT+EGR +GG G +AG E + AA GH Y Y L G+VIH GTA +GHYYSY +ER Sbjct: 235 EEDKEESLMYQLQRVFAHLQESDKAYYNPQGFCHALKDWDGEPTDVFVQQDVSDFLLMFFQQVEGMTQGTKCEEVLRHAFGGTLVHELIA-EGGRYSSRLEPCYFLSVMVQNIQTLDQALEAYISEEILSDYT-WETKDPLTGKAVKEATPTVKRASLAALPRHLILHLKRFEFDYETMQQIKINDRLEFPVDLDMYPYTLEGR---TAVRKGGTGIAAAGNAEDSAELRERTQSAA----GHPPEYYL----------YRLAGVVIHMGTANSGHYYSYIRER 499
BLAST of mRNA_M-pyrifera_M_contig84064.19613.1 vs. uniprot
Match: A0A7S4D6W9_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D6W9_HETAK) HSP 1 Score: 195 bits (496), Expect = 1.410e-55 Identity = 114/294 (38.78%), Postives = 167/294 (56.80%), Query Frame = 1 Query: 1 EDEREDSLLWQLQLMFANLQESQQQAYNPAGYTRAFKDWDGNPINTSEQRDASEYLTELFQKIEAGTQGTPQEDMLRRTLGGTVANELIAGDGMQYRANIEDFYFMSVPVKGHQSLQEGLKAAATGDVIEGYSGWE---DADGNGLPP--MDTTKRTSIKSAAPHLILHLRRFDFDFDVGMQVKLNDFFSFPRKLDLWPYTVEGRPDAVVAGEGGGGEGSAGTGARRIRSPEEAEEAADLGVGHTGNPYADTDMEREDWHYELVGMVIHSGTAQAGHYYSYSQERDDTGPTNRW 867 +++ ++SL+ QLQL+FA LQES++ YNPA + RAFK+W+G P + Q+DASE+LT FQ +E G G+ E ML+ + GG + NEL+A + + E FY++SV V+ +++L+ L A G+ +E Y+ WE + +G + + T KR S+K HL++HL+RF+FDF+ Q K+N F F LD+ PYTVEGR D EGGG AA+ G + ++Y L G V+H GTA +GHYYSY +ER T+RW Sbjct: 72 DEDPDESLMHQLQLLFAQLQESEKAYYNPAPFCRAFKNWEGEPTDVLVQQDASEFLTMFFQHVEGGIMGSASEGMLKHSFGGEICNELLAKEQGKRSERAEPFYYLSVDVRNNKTLEAALGAYVAGESVE-YT-WESEPEEEGGEVRKELLPTEKRASLKRLPRHLVVHLKRFEFDFETMQQAKINARFEFGMDLDMLPYTVEGREDGSGPAEGGGA-------------------AAERGPA-------------DYYNYTLCGAVVHVGTANSGHYYSYVRERG----TDRW 327
BLAST of mRNA_M-pyrifera_M_contig84064.19613.1 vs. uniprot
Match: A0A4D9CLS1_9STRA (USP domain-containing protein n=5 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CLS1_9STRA) HSP 1 Score: 203 bits (517), Expect = 1.450e-55 Identity = 117/284 (41.20%), Postives = 173/284 (60.92%), Query Frame = 1 Query: 1 EDEREDSLLWQLQLMFANLQESQQQAYNPAGYTRAFKDWDGNPINTSEQRDASEYLTELFQKIEAGTQGTPQEDMLRRTLGGTVANELIAGDGMQYRANIEDFYFMSVPVKGHQSLQEGLKAAATGDVIEGYSGWEDAD---GNGLPPMD-TTKRTSIKSAAPHLILHLRRFDFDFDVGMQVKLNDFFSFPRKLDLWPYTVEGRPDAVVAGEGGGGEGSAGTGARRIRSPEEAEEAADLGVGHTGNPYADTDMEREDWHYELVGMVIHSGTAQAGHYYSYSQER 840 E+++E+SL++QLQ +FA+LQES + +NP G+ A K+WDG P + Q+D S++L FQ++E TQGT E++LR GGT+ +ELIA +G +Y + +E YF+SV V+ Q+L + L+A + +++ Y+ WE D G + T KR S+ + HLILHL+RF+FD++ Q+K+ND FP LD++PYT+EGR AV G GTG + E+A E + G+P E + Y L G+VIH GTA +GHYYSY +ER Sbjct: 2269 EEDKEESLMYQLQRVFAHLQESDKAYFNPQGFCHALKNWDGEPTDVFVQQDVSDFLLMFFQQVEGMTQGTKCEEVLRHAFGGTLVHELIA-EGGRYSSRLEPCYFLSVMVQNIQTLDQALEAYISEEILSDYT-WETKDPLTGKAMKEATPTVKRASLAALPRHLILHLKRFEFDYETMQQIKINDRLEFPVDLDMYPYTLEGRT-AVRKG---------GTGISAAGNAEDAAELRERTQSAAGHP-------PEYYLYRLAGVVIHMGTANSGHYYSYIRER 2533
BLAST of mRNA_M-pyrifera_M_contig84064.19613.1 vs. uniprot
Match: A0A6H5KLT8_9PHAE (USP domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLT8_9PHAE) HSP 1 Score: 198 bits (503), Expect = 1.020e-53 Identity = 111/288 (38.54%), Postives = 166/288 (57.64%), Query Frame = 1 Query: 13 EDSLLWQLQLMFANLQESQQQAYNPAGYTRAFKDWDGNPINTSEQRDASEYLTELFQKIEAGTQGTPQEDMLRRTLGGTVANELIAGDGMQYRANIEDFYFMSVPVKGHQSLQEGLKAAATGDVIEGYSGWE-----DADGNGLPPMDTTKRTSIKSAAPHLILHLRRFDFDFDVGMQVKLNDFFSFPRKLDLWPYTVEGRP-DAVVAGEGGGGE--GSAGTGARRIRSPEEAEEAADLGVGHTGNPYADTDMEREDWHYELVGMVIHSGTAQAGHYYSYSQERDDTG 852 +DSL+WQLQ MF++LQES++ +NP G R+ +DW+G ++ Q+DASE++T+ FQ++E G+ E++L++ GG +NEL+A G+ Y E F ++SV VK ++L E L+ +V+ W+ + ++T KR SIKS +L++HL+RFDFDFD Q K+ND FP +L+++PYT EGR AG+ GG E G+ G GA + E A+ E +HY L G+V+H GTA +GHYYSY + RD G Sbjct: 742 DDSLMWQLQNMFSHLQESEKAHFNPVGLVRSLRDWEGQALDVMVQQDASEFITQFFQQVEGQVMGSASENILKQCFGGVYSNELLAEGGLLYSERPEPFSYISVEVKNMKTLAEALEVFTAEEVVSFK--WDKEINAETGERQAVTLNTKKRCSIKSLPNYLLIHLKRFDFDFDTMQQTKINDRLEFPIELNMYPYTKEGRAATTTAAGKEGGHEEVGTKGAGAEVEKEEEPAK-------------------PEEYYHYHLAGVVVHMGTANSGHYYSYIRPRDGGG 1008
BLAST of mRNA_M-pyrifera_M_contig84064.19613.1 vs. uniprot
Match: D7FN62_ECTSI (USP domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FN62_ECTSI) HSP 1 Score: 197 bits (501), Expect = 1.970e-53 Identity = 112/296 (37.84%), Postives = 163/296 (55.07%), Query Frame = 1 Query: 13 EDSLLWQLQLMFANLQ-----------ESQQQAYNPAGYTRAFKDWDGNPINTSEQRDASEYLTELFQKIEAGTQGTPQEDMLRRTLGGTVANELIAGDGMQYRANIEDFYFMSVPVKGHQSLQEGLKAAATGDVIEGYSGWE-----DADGNGLPPMDTTKRTSIKSAAPHLILHLRRFDFDFDVGMQVKLNDFFSFPRKLDLWPYTVEGRPDAVVAGEGGGGEGSAGTGARRIRSPEEAEEAADLGVGHTGNPYADTDMEREDWHYELVGMVIHSGTAQAGHYYSYSQERDDTG 852 +DSL+WQLQ MF++LQ ES++ +NP G R+ +DW+G ++ Q+DASE++T+ FQ++E G+P E++L+++ GG +NEL+A G+ Y E F ++SV VK ++L E L+ +V+ W+ + ++T KR SIKS HL++HL+RFDFDFD Q K+ND FP +L+++PYT EGR A GG GT E AD V P E +HY L G+V+H GTA +GHYYSY + RD G Sbjct: 1487 DDSLMWQLQNMFSHLQDATRCSLLVNQESEKAHFNPVGLVRSLRDWEGQALDVMVQQDASEFITQFFQQVEGQVMGSPSENILKQSFGGLYSNELLAEGGLLYSERPEPFSYISVEVKNMKTLAEALEVFTAEEVVSFK--WDKEINAETGERQAVTLNTKKRCSIKSLPNHLLIHLKRFDFDFDTMQQTKINDRLEFPIELNMYPYTKEGRAATTAAASKEGGHEEVGT------------EGADAEVEKEEEPA----KPEEYYHYHLAGVVVHMGTANSGHYYSYIRPRDGGG 1764
BLAST of mRNA_M-pyrifera_M_contig84064.19613.1 vs. uniprot
Match: A0A836CHU2_9STRA (USP domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHU2_9STRA) HSP 1 Score: 179 bits (453), Expect = 1.590e-50 Identity = 107/283 (37.81%), Postives = 153/283 (54.06%), Query Frame = 1 Query: 7 EREDSLLWQLQLMFANLQESQQQAYNPAGYTRAFKDWDGNPINTSEQRDASEYLTELFQKIEAGTQGTPQEDMLRRTLGGTVANELIAGDGMQYRANIEDFYFMSVPVKGHQSLQEGLKAAATGDVIEGYSGWEDADGNGLPPMDTTKRTSIKSAAPHLILHLRRFDFDFDVGMQVKLNDFFSFPRKLDLWPYTVEG---RPDAVVAGEGGGGEGSAGTGARRIRSPEEAEEAADLGVGHTGNPYADTDMERED--WHYELVGMVIHSGTAQAGHYYSYSQER 840 +RED+ +WQLQ +FA+LQES++ YNP G+ +A +DW+G P++ Q+DASE++ L Q++E GTP E LR GG +NEL+A G + E F ++SV VK ++L L+A G+ +E Y E A LP T KR +I+ PHL++HL+RF+FDF QVK+ND F FP +LD+ PYT E R A +D +R D + Y+L G+V+H GTA +GHYYS+ +ER Sbjct: 32 QREDAFMWQLQSLFAHLQESEKAHYNPLGFCQALRDWEGEPVDVLMQQDASEFVAMLLQQLEGRVMGTPAEAPLREAFGGVFSNELLAQGGRRSERP-EPFSYVSVGVKDTRTLAGALRAFVAGETVE-YRWGEGAAAATLP---TLKRLAIRELPPHLLIHLKRFEFDFATMQQVKINDRFEFPLELDMRPYTTEALAERDAAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKESDETPKRPDSYYRYQLAGVVVHMGTANSGHYYSFIRER 309
BLAST of mRNA_M-pyrifera_M_contig84064.19613.1 vs. uniprot
Match: A0A7S3N941_9SPIT (Hypothetical protein (Fragment) n=1 Tax=Euplotes harpa TaxID=151035 RepID=A0A7S3N941_9SPIT) HSP 1 Score: 182 bits (462), Expect = 1.830e-49 Identity = 107/296 (36.15%), Postives = 160/296 (54.05%), Query Frame = 1 Query: 10 REDSLLWQLQLMFANLQESQQQAYNPAGYTRAFKDWDGNPINTSEQRDASEYLTELFQKIEAGTQGTPQEDMLRRTLGGTVANELIAGDGMQYRANIEDFYFMSVPVKGHQSLQEGLKAAATGDVIEGYSGW--EDADGNGLPPMDTTKRTSIKSAAPHLILHLRRFDFDFDVGMQVKLNDFFSFPRKLDLWPYTVEGRPDAVVAGEGGGGEGSAGTGARRIRSPEEAEEAADLGVGHTGNPYADTDMERED--------WHYELVGMVIHSGTAQAGHYYSYSQERDDTGPTNRW 867 +ED++L+QLQ +FA L +S+QQ YNP G+T AFKDWDGNP N Q D E+ ++E +G+PQE M++ GGT ANELI Y E + +++ VK +S++E L A G++++G + + E D + T KRT IK HLIL L+RF+FD+D+ ++K+N + FP L++ PYT EG RR + EE E AD + E ED ++Y+L G+++HSG A+ GHYYS+ ++R+D + W Sbjct: 189 KEDNILYQLQCIFAFLNQSEQQYYNPQGFTNAFKDWDGNPTNVLIQMDVDEFFNMFMDRLEFAIKGSPQEKMIQDHFGGTYANELICKGCPHYSERSEPYLAVNLQVKNKKSIKESLDALIEGEMLDGDNSYYCEKCD----KKVPTLKRTCIKRLPKHLILVLKRFEFDYDMMQKMKVNAYCEFPEVLNMEPYTQEGLK-------------------RREKKSEEKE--------------ADDNEETEDKPKYPLELYNYKLSGVLVHSGYAEGGHYYSFIKDREDVEGNDTW 447
BLAST of mRNA_M-pyrifera_M_contig84064.19613.1 vs. uniprot
Match: A0A078A933_STYLE (USP domain-containing protein n=1 Tax=Stylonychia lemnae TaxID=5949 RepID=A0A078A933_STYLE) HSP 1 Score: 185 bits (470), Expect = 2.740e-49 Identity = 108/284 (38.03%), Postives = 159/284 (55.99%), Query Frame = 1 Query: 7 EREDSLLWQLQLMFANLQESQQQAYNPAGYTRAFKDWDGNPINTSEQRDASEYLTELFQKIEAGTQGTPQEDMLRRTLGGTVANELIAGDGMQYRANIEDFYFMSVPVKGHQSLQEGLKAAATGDVIEGYSGW--EDADGNGLPPMDTTKRTSIKSAAPHLILHLRRFDFDFDVGMQVKLNDFFSFPRKLDLWPYTVEGRPDAVVAGEGGGGEGSAGTGARRIRSPEEAEEAADLGVGHTGNPYADTDMER---EDWHYELVGMVIHSGTAQAGHYYSYSQERD 843 E+ED++L+QLQL+FA L +S++Q NP G+ AFKDWDGNP N EQ D E+ + +IE +G+P + +++ GG A+E+I N E F +S+PVK +S+ EGL A GD++EG + + E D +D KRT +K HLI+ LRRF+FD+D ++VK+ND+ FP + + PYT EG ARR + + EE G + + D R E + Y+L G+V+HSGTA +GHYYS+ ++RD Sbjct: 1649 EKEDNMLYQLQLLFAGLLKSEKQYVNPKGFCHAFKDWDGNPTNVMEQMDVEEFFNMIMDRIETAIKGSPYQHTIQQHFGGKFASEMICKGCPHRYENSEPFLSISIPVKNKKSILEGLGAFIQGDMLEGDNAYMCEKCD----KKVDALKRTCVKKLPKHLIVALRRFEFDYDKMIRVKINDYCEFPMEFSMEPYTQEGL-------------------ARREKFQKMKEER---GEDDSNEQQIEMDPLRYPPEYYDYQLSGIVVHSGTADSGHYYSFIKDRD 1906 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig84064.19613.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig84064.19613.1 >prot_M-pyrifera_M_contig84064.19613.1 ID=prot_M-pyrifera_M_contig84064.19613.1|Name=mRNA_M-pyrifera_M_contig84064.19613.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=289bp EDEREDSLLWQLQLMFANLQESQQQAYNPAGYTRAFKDWDGNPINTSEQRback to top mRNA from alignment at M-pyrifera_M_contig84064:19..885+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig84064.19613.1 ID=mRNA_M-pyrifera_M_contig84064.19613.1|Name=mRNA_M-pyrifera_M_contig84064.19613.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=867bp|location=Sequence derived from alignment at M-pyrifera_M_contig84064:19..885+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig84064:19..885+ >mRNA_M-pyrifera_M_contig84064.19613.1 ID=mRNA_M-pyrifera_M_contig84064.19613.1|Name=mRNA_M-pyrifera_M_contig84064.19613.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1734bp|location=Sequence derived from alignment at M-pyrifera_M_contig84064:19..885+ (Macrocystis pyrifera P11B4 male)back to top |