mRNA_M-pyrifera_M_contig84064.19613.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig84064.19613.1
Unique NamemRNA_M-pyrifera_M_contig84064.19613.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig84064.19613.1 vs. uniprot
Match: A0A813CNA6_9DINO (USP9X protein n=2 Tax=Symbiodinium TaxID=2949 RepID=A0A813CNA6_9DINO)

HSP 1 Score: 258 bits (658), Expect = 1.900e-74
Identity = 137/286 (47.90%), Postives = 178/286 (62.24%), Query Frame = 1
Query:   13 EDSLLWQLQLMFANLQESQQQAYNPAGYTRAFKDWDGNPINTSEQRDASEYLTELFQKIEAGTQGTPQEDMLRRTLGGTVANELIAGDGMQYRANIEDFYFMSVPVKGHQSLQEGLKAA-ATGDVIEGYSGWEDADGNGLPPMDTTKRTSIKSAAPHLILHLRRFDFDFDVGMQVKLNDFFSFPRKLDLWPYTVEGRPDAVVAGEGGGGEGSAGTGARRIRSPEEAEEAADLGVGHTGNPYADTDMEREDWHYELVGMVIHSGTAQAGHYYSYSQERDDTGPTNRW 867
            EDS+  Q+Q M ANLQE+Q++AYNP G   A +DWDGNPIN  EQRDASEYLT+LF K+E    G+ Q  +++  LGG  A+E IA     YRA    FY++S  V+ ++SL+E L+     GD++EGY   +D     L   DT +RTS++    HLI+H +R D D + G+ VKLN  F FP +L+LWPYTV+GR DAV   EG          +RR+  PE+       G     N YA TD   ED+ Y+LVGMVIH+GTA +GHY+SY QER   GPT RW
Sbjct: 2437 EDSVTHQVQRMLANLQETQRRAYNPRGLCMALRDWDGNPINVMEQRDASEYLTQLFDKLETEMAGSKQASIIKDVLGGETASEFIADGARMYRARTTPFYYLSATVRHYKSLEESLRREFGAGDMMEGYRWEDDKTEADLGRFDTIRRTSLRKGPKHLIVHFKRLDIDVERGIPVKLNSRFEFPHRLNLWPYTVQGRADAVKGREG----------SRRVVDPEDPATHVAPGSEDDCNDYA-TDEGPEDFEYQLVGMVIHTGTATSGHYFSYVQERGADGPTGRW 2711          
BLAST of mRNA_M-pyrifera_M_contig84064.19613.1 vs. uniprot
Match: A0A7S1UJ59_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UJ59_9STRA)

HSP 1 Score: 210 bits (535), Expect = 9.700e-62
Identity = 124/298 (41.61%), Postives = 177/298 (59.40%), Query Frame = 1
Query:    1 EDEREDSLLWQLQLMFANLQESQQQAYNPAGYTRAFKDWDGNPINTSEQRDASEYLTELFQKIEAGTQGTPQEDMLRRTLGGTVANELIAGDGMQYRANIEDFYFMSVPVKGHQSLQEGLKAAATGDVIEGYSGWED----ADGNG-----LPPMDTTKRTSIKSAAPHLILHLRRFDFDFDVGMQVKLNDFFSFPRKLDLWPYTVEGRPDAVVAGEGGGGEGSAGTGARRIRSPEEAEEAADLGVGHTGNPYADTDMEREDWHYELVGMVIHSGTAQAGHYYSYSQERDDTGPTNRW 867
            ED  ED L++QLQ MFA+LQ S++ +YNP  +T AF+DWD  PI+   Q+DASE+ + L  K+E    GT  E++LR T+ GTV+ EL+A    +YRA  + FY + VP++  +SL+E +     G+ +E Y+ WE+    AD NG        ++TTKR S+K   PHL++HL+RFDFD++   QVKLND+F FP  +D+  +T +GR DA    + G G+   G G              + G G     YA   +  + + YEL G+VIH GTA +GHYYSY +ERD     N+W
Sbjct:  101 EDAAED-LIFQLQNMFAHLQNSEKASYNPRAFTNAFRDWDNMPIDVLVQQDASEFFSNLLTKLEGKLMGTEFENLLRDTVQGTVSQELLA-QPEKYRAREDVFYLIEVPIQNLRSLEESMHKFIEGETVE-YT-WEEESGEADENGEKVVRKETLNTTKRLSLKKLPPHLVIHLKRFDFDYETFQQVKLNDYFEFPTDMDMREFTQDGRADATPLDQRGKGDKDGGEG--------------EGGAGSDAEEYAA--LPDDYFQYELTGIVIHMGTANSGHYYSYIRERDSD---NKW 375          
BLAST of mRNA_M-pyrifera_M_contig84064.19613.1 vs. uniprot
Match: I2CRD3_NANGC (Ubiquitin carboxyl-terminal hydrolase 7 n=2 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CRD3_NANGC)

HSP 1 Score: 205 bits (522), Expect = 2.730e-56
Identity = 118/284 (41.55%), Postives = 170/284 (59.86%), Query Frame = 1
Query:    1 EDEREDSLLWQLQLMFANLQESQQQAYNPAGYTRAFKDWDGNPINTSEQRDASEYLTELFQKIEAGTQGTPQEDMLRRTLGGTVANELIAGDGMQYRANIEDFYFMSVPVKGHQSLQEGLKAAATGDVIEGYSGWEDAD---GNGLPPMD-TTKRTSIKSAAPHLILHLRRFDFDFDVGMQVKLNDFFSFPRKLDLWPYTVEGRPDAVVAGEGGGGEGSAGTGARRIRSPEEAEEAADLGVGHTGNPYADTDMEREDWHYELVGMVIHSGTAQAGHYYSYSQER 840
            E+++E+SL++QLQ +FA+LQES +  YNP G+  A KDWDG P +   Q+D S++L   FQ++E  TQGT  E++LR   GGT+ +ELIA +G +Y + +E  YF+SV V+  Q+L + L+A  + +++  Y+ WE  D   G  +     T KR S+ +   HLILHL+RF+FD++   Q+K+ND   FP  LD++PYT+EGR       +GG G  +AG         E  + AA    GH    Y           Y L G+VIH GTA +GHYYSY +ER
Sbjct:  235 EEDKEESLMYQLQRVFAHLQESDKAYYNPQGFCHALKDWDGEPTDVFVQQDVSDFLLMFFQQVEGMTQGTKCEEVLRHAFGGTLVHELIA-EGGRYSSRLEPCYFLSVMVQNIQTLDQALEAYISEEILSDYT-WETKDPLTGKAVKEATPTVKRASLAALPRHLILHLKRFEFDYETMQQIKINDRLEFPVDLDMYPYTLEGR---TAVRKGGTGIAAAGNAEDSAELRERTQSAA----GHPPEYYL----------YRLAGVVIHMGTANSGHYYSYIRER 499          
BLAST of mRNA_M-pyrifera_M_contig84064.19613.1 vs. uniprot
Match: A0A7S4D6W9_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D6W9_HETAK)

HSP 1 Score: 195 bits (496), Expect = 1.410e-55
Identity = 114/294 (38.78%), Postives = 167/294 (56.80%), Query Frame = 1
Query:    1 EDEREDSLLWQLQLMFANLQESQQQAYNPAGYTRAFKDWDGNPINTSEQRDASEYLTELFQKIEAGTQGTPQEDMLRRTLGGTVANELIAGDGMQYRANIEDFYFMSVPVKGHQSLQEGLKAAATGDVIEGYSGWE---DADGNGLPP--MDTTKRTSIKSAAPHLILHLRRFDFDFDVGMQVKLNDFFSFPRKLDLWPYTVEGRPDAVVAGEGGGGEGSAGTGARRIRSPEEAEEAADLGVGHTGNPYADTDMEREDWHYELVGMVIHSGTAQAGHYYSYSQERDDTGPTNRW 867
            +++ ++SL+ QLQL+FA LQES++  YNPA + RAFK+W+G P +   Q+DASE+LT  FQ +E G  G+  E ML+ + GG + NEL+A +  +     E FY++SV V+ +++L+  L A   G+ +E Y+ WE   + +G  +    + T KR S+K    HL++HL+RF+FDF+   Q K+N  F F   LD+ PYTVEGR D     EGGG                    AA+ G               + ++Y L G V+H GTA +GHYYSY +ER     T+RW
Sbjct:   72 DEDPDESLMHQLQLLFAQLQESEKAYYNPAPFCRAFKNWEGEPTDVLVQQDASEFLTMFFQHVEGGIMGSASEGMLKHSFGGEICNELLAKEQGKRSERAEPFYYLSVDVRNNKTLEAALGAYVAGESVE-YT-WESEPEEEGGEVRKELLPTEKRASLKRLPRHLVVHLKRFEFDFETMQQAKINARFEFGMDLDMLPYTVEGREDGSGPAEGGGA-------------------AAERGPA-------------DYYNYTLCGAVVHVGTANSGHYYSYVRERG----TDRW 327          
BLAST of mRNA_M-pyrifera_M_contig84064.19613.1 vs. uniprot
Match: A0A4D9CLS1_9STRA (USP domain-containing protein n=5 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CLS1_9STRA)

HSP 1 Score: 203 bits (517), Expect = 1.450e-55
Identity = 117/284 (41.20%), Postives = 173/284 (60.92%), Query Frame = 1
Query:    1 EDEREDSLLWQLQLMFANLQESQQQAYNPAGYTRAFKDWDGNPINTSEQRDASEYLTELFQKIEAGTQGTPQEDMLRRTLGGTVANELIAGDGMQYRANIEDFYFMSVPVKGHQSLQEGLKAAATGDVIEGYSGWEDAD---GNGLPPMD-TTKRTSIKSAAPHLILHLRRFDFDFDVGMQVKLNDFFSFPRKLDLWPYTVEGRPDAVVAGEGGGGEGSAGTGARRIRSPEEAEEAADLGVGHTGNPYADTDMEREDWHYELVGMVIHSGTAQAGHYYSYSQER 840
            E+++E+SL++QLQ +FA+LQES +  +NP G+  A K+WDG P +   Q+D S++L   FQ++E  TQGT  E++LR   GGT+ +ELIA +G +Y + +E  YF+SV V+  Q+L + L+A  + +++  Y+ WE  D   G  +     T KR S+ +   HLILHL+RF+FD++   Q+K+ND   FP  LD++PYT+EGR  AV  G         GTG     + E+A E  +      G+P        E + Y L G+VIH GTA +GHYYSY +ER
Sbjct: 2269 EEDKEESLMYQLQRVFAHLQESDKAYFNPQGFCHALKNWDGEPTDVFVQQDVSDFLLMFFQQVEGMTQGTKCEEVLRHAFGGTLVHELIA-EGGRYSSRLEPCYFLSVMVQNIQTLDQALEAYISEEILSDYT-WETKDPLTGKAMKEATPTVKRASLAALPRHLILHLKRFEFDYETMQQIKINDRLEFPVDLDMYPYTLEGRT-AVRKG---------GTGISAAGNAEDAAELRERTQSAAGHP-------PEYYLYRLAGVVIHMGTANSGHYYSYIRER 2533          
BLAST of mRNA_M-pyrifera_M_contig84064.19613.1 vs. uniprot
Match: A0A6H5KLT8_9PHAE (USP domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLT8_9PHAE)

HSP 1 Score: 198 bits (503), Expect = 1.020e-53
Identity = 111/288 (38.54%), Postives = 166/288 (57.64%), Query Frame = 1
Query:   13 EDSLLWQLQLMFANLQESQQQAYNPAGYTRAFKDWDGNPINTSEQRDASEYLTELFQKIEAGTQGTPQEDMLRRTLGGTVANELIAGDGMQYRANIEDFYFMSVPVKGHQSLQEGLKAAATGDVIEGYSGWE-----DADGNGLPPMDTTKRTSIKSAAPHLILHLRRFDFDFDVGMQVKLNDFFSFPRKLDLWPYTVEGRP-DAVVAGEGGGGE--GSAGTGARRIRSPEEAEEAADLGVGHTGNPYADTDMEREDWHYELVGMVIHSGTAQAGHYYSYSQERDDTG 852
            +DSL+WQLQ MF++LQES++  +NP G  R+ +DW+G  ++   Q+DASE++T+ FQ++E    G+  E++L++  GG  +NEL+A  G+ Y    E F ++SV VK  ++L E L+     +V+     W+     +        ++T KR SIKS   +L++HL+RFDFDFD   Q K+ND   FP +L+++PYT EGR      AG+ GG E  G+ G GA   +  E A+                     E +HY L G+V+H GTA +GHYYSY + RD  G
Sbjct:  742 DDSLMWQLQNMFSHLQESEKAHFNPVGLVRSLRDWEGQALDVMVQQDASEFITQFFQQVEGQVMGSASENILKQCFGGVYSNELLAEGGLLYSERPEPFSYISVEVKNMKTLAEALEVFTAEEVVSFK--WDKEINAETGERQAVTLNTKKRCSIKSLPNYLLIHLKRFDFDFDTMQQTKINDRLEFPIELNMYPYTKEGRAATTTAAGKEGGHEEVGTKGAGAEVEKEEEPAK-------------------PEEYYHYHLAGVVVHMGTANSGHYYSYIRPRDGGG 1008          
BLAST of mRNA_M-pyrifera_M_contig84064.19613.1 vs. uniprot
Match: D7FN62_ECTSI (USP domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FN62_ECTSI)

HSP 1 Score: 197 bits (501), Expect = 1.970e-53
Identity = 112/296 (37.84%), Postives = 163/296 (55.07%), Query Frame = 1
Query:   13 EDSLLWQLQLMFANLQ-----------ESQQQAYNPAGYTRAFKDWDGNPINTSEQRDASEYLTELFQKIEAGTQGTPQEDMLRRTLGGTVANELIAGDGMQYRANIEDFYFMSVPVKGHQSLQEGLKAAATGDVIEGYSGWE-----DADGNGLPPMDTTKRTSIKSAAPHLILHLRRFDFDFDVGMQVKLNDFFSFPRKLDLWPYTVEGRPDAVVAGEGGGGEGSAGTGARRIRSPEEAEEAADLGVGHTGNPYADTDMEREDWHYELVGMVIHSGTAQAGHYYSYSQERDDTG 852
            +DSL+WQLQ MF++LQ           ES++  +NP G  R+ +DW+G  ++   Q+DASE++T+ FQ++E    G+P E++L+++ GG  +NEL+A  G+ Y    E F ++SV VK  ++L E L+     +V+     W+     +        ++T KR SIKS   HL++HL+RFDFDFD   Q K+ND   FP +L+++PYT EGR     A    GG    GT            E AD  V     P        E +HY L G+V+H GTA +GHYYSY + RD  G
Sbjct: 1487 DDSLMWQLQNMFSHLQDATRCSLLVNQESEKAHFNPVGLVRSLRDWEGQALDVMVQQDASEFITQFFQQVEGQVMGSPSENILKQSFGGLYSNELLAEGGLLYSERPEPFSYISVEVKNMKTLAEALEVFTAEEVVSFK--WDKEINAETGERQAVTLNTKKRCSIKSLPNHLLIHLKRFDFDFDTMQQTKINDRLEFPIELNMYPYTKEGRAATTAAASKEGGHEEVGT------------EGADAEVEKEEEPA----KPEEYYHYHLAGVVVHMGTANSGHYYSYIRPRDGGG 1764          
BLAST of mRNA_M-pyrifera_M_contig84064.19613.1 vs. uniprot
Match: A0A836CHU2_9STRA (USP domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHU2_9STRA)

HSP 1 Score: 179 bits (453), Expect = 1.590e-50
Identity = 107/283 (37.81%), Postives = 153/283 (54.06%), Query Frame = 1
Query:    7 EREDSLLWQLQLMFANLQESQQQAYNPAGYTRAFKDWDGNPINTSEQRDASEYLTELFQKIEAGTQGTPQEDMLRRTLGGTVANELIAGDGMQYRANIEDFYFMSVPVKGHQSLQEGLKAAATGDVIEGYSGWEDADGNGLPPMDTTKRTSIKSAAPHLILHLRRFDFDFDVGMQVKLNDFFSFPRKLDLWPYTVEG---RPDAVVAGEGGGGEGSAGTGARRIRSPEEAEEAADLGVGHTGNPYADTDMERED--WHYELVGMVIHSGTAQAGHYYSYSQER 840
            +RED+ +WQLQ +FA+LQES++  YNP G+ +A +DW+G P++   Q+DASE++  L Q++E    GTP E  LR   GG  +NEL+A  G +     E F ++SV VK  ++L   L+A   G+ +E Y   E A    LP   T KR +I+   PHL++HL+RF+FDF    QVK+ND F FP +LD+ PYT E    R  A                                         +D   +R D  + Y+L G+V+H GTA +GHYYS+ +ER
Sbjct:   32 QREDAFMWQLQSLFAHLQESEKAHYNPLGFCQALRDWEGEPVDVLMQQDASEFVAMLLQQLEGRVMGTPAEAPLREAFGGVFSNELLAQGGRRSERP-EPFSYVSVGVKDTRTLAGALRAFVAGETVE-YRWGEGAAAATLP---TLKRLAIRELPPHLLIHLKRFEFDFATMQQVKINDRFEFPLELDMRPYTTEALAERDAAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKESDETPKRPDSYYRYQLAGVVVHMGTANSGHYYSFIRER 309          
BLAST of mRNA_M-pyrifera_M_contig84064.19613.1 vs. uniprot
Match: A0A7S3N941_9SPIT (Hypothetical protein (Fragment) n=1 Tax=Euplotes harpa TaxID=151035 RepID=A0A7S3N941_9SPIT)

HSP 1 Score: 182 bits (462), Expect = 1.830e-49
Identity = 107/296 (36.15%), Postives = 160/296 (54.05%), Query Frame = 1
Query:   10 REDSLLWQLQLMFANLQESQQQAYNPAGYTRAFKDWDGNPINTSEQRDASEYLTELFQKIEAGTQGTPQEDMLRRTLGGTVANELIAGDGMQYRANIEDFYFMSVPVKGHQSLQEGLKAAATGDVIEGYSGW--EDADGNGLPPMDTTKRTSIKSAAPHLILHLRRFDFDFDVGMQVKLNDFFSFPRKLDLWPYTVEGRPDAVVAGEGGGGEGSAGTGARRIRSPEEAEEAADLGVGHTGNPYADTDMERED--------WHYELVGMVIHSGTAQAGHYYSYSQERDDTGPTNRW 867
            +ED++L+QLQ +FA L +S+QQ YNP G+T AFKDWDGNP N   Q D  E+      ++E   +G+PQE M++   GGT ANELI      Y    E +  +++ VK  +S++E L A   G++++G + +  E  D      + T KRT IK    HLIL L+RF+FD+D+  ++K+N +  FP  L++ PYT EG                     RR +  EE E              AD + E ED        ++Y+L G+++HSG A+ GHYYS+ ++R+D    + W
Sbjct:  189 KEDNILYQLQCIFAFLNQSEQQYYNPQGFTNAFKDWDGNPTNVLIQMDVDEFFNMFMDRLEFAIKGSPQEKMIQDHFGGTYANELICKGCPHYSERSEPYLAVNLQVKNKKSIKESLDALIEGEMLDGDNSYYCEKCD----KKVPTLKRTCIKRLPKHLILVLKRFEFDYDMMQKMKVNAYCEFPEVLNMEPYTQEGLK-------------------RREKKSEEKE--------------ADDNEETEDKPKYPLELYNYKLSGVLVHSGYAEGGHYYSFIKDREDVEGNDTW 447          
BLAST of mRNA_M-pyrifera_M_contig84064.19613.1 vs. uniprot
Match: A0A078A933_STYLE (USP domain-containing protein n=1 Tax=Stylonychia lemnae TaxID=5949 RepID=A0A078A933_STYLE)

HSP 1 Score: 185 bits (470), Expect = 2.740e-49
Identity = 108/284 (38.03%), Postives = 159/284 (55.99%), Query Frame = 1
Query:    7 EREDSLLWQLQLMFANLQESQQQAYNPAGYTRAFKDWDGNPINTSEQRDASEYLTELFQKIEAGTQGTPQEDMLRRTLGGTVANELIAGDGMQYRANIEDFYFMSVPVKGHQSLQEGLKAAATGDVIEGYSGW--EDADGNGLPPMDTTKRTSIKSAAPHLILHLRRFDFDFDVGMQVKLNDFFSFPRKLDLWPYTVEGRPDAVVAGEGGGGEGSAGTGARRIRSPEEAEEAADLGVGHTGNPYADTDMER---EDWHYELVGMVIHSGTAQAGHYYSYSQERD 843
            E+ED++L+QLQL+FA L +S++Q  NP G+  AFKDWDGNP N  EQ D  E+   +  +IE   +G+P +  +++  GG  A+E+I         N E F  +S+PVK  +S+ EGL A   GD++EG + +  E  D      +D  KRT +K    HLI+ LRRF+FD+D  ++VK+ND+  FP +  + PYT EG                    ARR +  +  EE    G   +     + D  R   E + Y+L G+V+HSGTA +GHYYS+ ++RD
Sbjct: 1649 EKEDNMLYQLQLLFAGLLKSEKQYVNPKGFCHAFKDWDGNPTNVMEQMDVEEFFNMIMDRIETAIKGSPYQHTIQQHFGGKFASEMICKGCPHRYENSEPFLSISIPVKNKKSILEGLGAFIQGDMLEGDNAYMCEKCD----KKVDALKRTCVKKLPKHLIVALRRFEFDYDKMIRVKINDYCEFPMEFSMEPYTQEGL-------------------ARREKFQKMKEER---GEDDSNEQQIEMDPLRYPPEYYDYQLSGIVVHSGTADSGHYYSFIKDRD 1906          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig84064.19613.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A813CNA6_9DINO1.900e-7447.90USP9X protein n=2 Tax=Symbiodinium TaxID=2949 RepI... [more]
A0A7S1UJ59_9STRA9.700e-6241.61Hypothetical protein (Fragment) n=1 Tax=Phaeomonas... [more]
I2CRD3_NANGC2.730e-5641.55Ubiquitin carboxyl-terminal hydrolase 7 n=2 Tax=Na... [more]
A0A7S4D6W9_HETAK1.410e-5538.78Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A4D9CLS1_9STRA1.450e-5541.20USP domain-containing protein n=5 Tax=Monodopsidac... [more]
A0A6H5KLT8_9PHAE1.020e-5338.54USP domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7FN62_ECTSI1.970e-5337.84USP domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A836CHU2_9STRA1.590e-5037.81USP domain-containing protein (Fragment) n=1 Tax=T... [more]
A0A7S3N941_9SPIT1.830e-4936.15Hypothetical protein (Fragment) n=1 Tax=Euplotes h... [more]
A0A078A933_STYLE2.740e-4938.03USP domain-containing protein n=1 Tax=Stylonychia ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig84064contigM-pyrifera_M_contig84064:19..885 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score199.9
Seed ortholog evalue1.6e-48
Seed eggNOG ortholog2880.D7FN62
KEGG koko:K11840,ko:K11869
Hectar predicted targeting categoryother localisation
EggNOG free text desc.ubiquitinyl hydrolase activity
EggNOG OGsCOG5077@1,KOG1866@2759
EC3.4.19.12
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko01002,ko04121
Exons1
Model size867
Cds size867
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816747.9009461-CDS-M-pyrifera_M_contig84064:18..8851622816747.9009461-CDS-M-pyrifera_M_contig84064:18..885Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig84064 19..885 +
1692278154.6164234-CDS-M-pyrifera_M_contig84064:18..8851692278154.6164234-CDS-M-pyrifera_M_contig84064:18..885Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig84064 19..885 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig84064.19613.1prot_M-pyrifera_M_contig84064.19613.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig84064 19..885 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig84064.19613.1

>prot_M-pyrifera_M_contig84064.19613.1 ID=prot_M-pyrifera_M_contig84064.19613.1|Name=mRNA_M-pyrifera_M_contig84064.19613.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=289bp
EDEREDSLLWQLQLMFANLQESQQQAYNPAGYTRAFKDWDGNPINTSEQR
DASEYLTELFQKIEAGTQGTPQEDMLRRTLGGTVANELIAGDGMQYRANI
EDFYFMSVPVKGHQSLQEGLKAAATGDVIEGYSGWEDADGNGLPPMDTTK
RTSIKSAAPHLILHLRRFDFDFDVGMQVKLNDFFSFPRKLDLWPYTVEGR
PDAVVAGEGGGGEGSAGTGARRIRSPEEAEEAADLGVGHTGNPYADTDME
REDWHYELVGMVIHSGTAQAGHYYSYSQERDDTGPTNRW
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mRNA from alignment at M-pyrifera_M_contig84064:19..885+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig84064.19613.1 ID=mRNA_M-pyrifera_M_contig84064.19613.1|Name=mRNA_M-pyrifera_M_contig84064.19613.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=867bp|location=Sequence derived from alignment at M-pyrifera_M_contig84064:19..885+ (Macrocystis pyrifera P11B4 male)
GAAGATGAGCGTGAAGATAGTTTGTTATGGCAACTGCAACTCATGTTTGC AAACCTTCAAGAATCACAACAACAAGCGTACAATCCAGCGGGTTACACTC GTGCATTCAAGGATTGGGATGGTAATCCAATTAATACTTCGGAGCAACGT GATGCTTCAGAGTATTTGACTGAGCTGTTCCAAAAGATTGAAGCTGGGAC CCAAGGAACTCCACAAGAAGACATGCTACGTCGTACTTTGGGTGGAACTG TGGCGAACGAGTTGATTGCTGGAGATGGGATGCAATATCGTGCCAACATT GAAGACTTTTACTTCATGTCCGTGCCTGTCAAAGGACATCAATCATTACA AGAAGGTTTGAAAGCTGCAGCAACTGGTGATGTGATTGAAGGATATTCCG GTTGGGAAGATGCAGATGGGAATGGTTTGCCACCCATGGACACAACGAAG CGTACTTCCATCAAGAGTGCAGCACCCCACCTTATTCTTCACTTACGTCG TTTTGATTTTGATTTTGACGTTGGGATGCAAGTGAAGTTGAATGACTTCT TCTCCTTCCCACGGAAACTAGACCTGTGGCCGTACACAGTGGAAGGACGA CCAGATGCAGTTGTTGCTGGAGAAGGTGGTGGTGGTGAAGGGTCTGCAGG GACAGGCGCACGTCGTATTCGTTCTCCAGAAGAAGCAGAAGAAGCTGCTG ATTTGGGAGTTGGCCACACTGGAAACCCGTATGCTGACACCGACATGGAG CGTGAAGATTGGCATTATGAGTTAGTGGGAATGGTGATTCATTCTGGGAC TGCACAAGCTGGTCACTATTATTCATACAGCCAAGAGCGTGATGACACTG GACCAACGAACCGTTGG
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig84064:19..885+

>mRNA_M-pyrifera_M_contig84064.19613.1 ID=mRNA_M-pyrifera_M_contig84064.19613.1|Name=mRNA_M-pyrifera_M_contig84064.19613.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1734bp|location=Sequence derived from alignment at M-pyrifera_M_contig84064:19..885+ (Macrocystis pyrifera P11B4 male)
GAAGATGAGCGTGAAGATAGTTTGTTATGGCAACTGCAACTCATGTTTGC
AAACCTTCAAGAATCACAACAACAAGCGTACAATCCAGCGGGTTACACTC
GTGCATTCAAGGATTGGGATGGTAATCCAATTAATACTTCGGAGCAACGT
GATGCTTCAGAGTATTTGACTGAGCTGTTCCAAAAGATTGAAGCTGGGAC
CCAAGGAACTCCACAAGAAGACATGCTACGTCGTACTTTGGGTGGAACTG
TGGCGAACGAGTTGATTGCTGGAGATGGGATGCAATATCGTGCCAACATT
GAAGACTTTTACTTCATGTCCGTGCCTGTCAAAGGACATCAATCATTACA
AGAAGGTTTGAAAGCTGCAGCAACTGGTGATGTGATTGAAGGATATTCCG
GTTGGGAAGATGCAGATGGGAATGGTTTGCCACCCATGGACACAACGAAG
CGTACTTCCATCAAGAGTGCAGCACCCCACCTTATTCTTCACTTACGTCG
TTTTGATTTTGATTTTGACGTTGGGATGCAAGTGAAGTTGAATGACTTCT
TCTCCTTCCCACGGAAACTAGACCTGTGGCCGTACACAGTGGAAGGACGA
CCAGATGCAGTTGTTGCTGGAGAAGGTGGTGGTGGTGAAGGGTCTGCAGG
GACAGGCGCACGTCGTATTCGTTCTCCAGAAGAAGCAGAAGAAGCTGCTG
ATTTGGGAGTTGGCCACACTGGAAACCCGTATGCTGACACCGACATGGAG
CGTGAAGATTGGCATTATGAGTTAGTGGGAATGGTGATTCATTCTGGGAC
TGCACAAGCTGGTCACTATTATTCATACAGCCAAGAGCGTGATGACACTG
GACCAACGAACCGTTGGGAAGATGAGCGTGAAGATAGTTTGTTATGGCAA
CTGCAACTCATGTTTGCAAACCTTCAAGAATCACAACAACAAGCGTACAA
TCCAGCGGGTTACACTCGTGCATTCAAGGATTGGGATGGTAATCCAATTA
ATACTTCGGAGCAACGTGATGCTTCAGAGTATTTGACTGAGCTGTTCCAA
AAGATTGAAGCTGGGACCCAAGGAACTCCACAAGAAGACATGCTACGTCG
TACTTTGGGTGGAACTGTGGCGAACGAGTTGATTGCTGGAGATGGGATGC
AATATCGTGCCAACATTGAAGACTTTTACTTCATGTCCGTGCCTGTCAAA
GGACATCAATCATTACAAGAAGGTTTGAAAGCTGCAGCAACTGGTGATGT
GATTGAAGGATATTCCGGTTGGGAAGATGCAGATGGGAATGGTTTGCCAC
CCATGGACACAACGAAGCGTACTTCCATCAAGAGTGCAGCACCCCACCTT
ATTCTTCACTTACGTCGTTTTGATTTTGATTTTGACGTTGGGATGCAAGT
GAAGTTGAATGACTTCTTCTCCTTCCCACGGAAACTAGACCTGTGGCCGT
ACACAGTGGAAGGACGACCAGATGCAGTTGTTGCTGGAGAAGGTGGTGGT
GGTGAAGGGTCTGCAGGGACAGGCGCACGTCGTATTCGTTCTCCAGAAGA
AGCAGAAGAAGCTGCTGATTTGGGAGTTGGCCACACTGGAAACCCGTATG
CTGACACCGACATGGAGCGTGAAGATTGGCATTATGAGTTAGTGGGAATG
GTGATTCATTCTGGGACTGCACAAGCTGGTCACTATTATTCATACAGCCA
AGAGCGTGATGACACTGGACCAACGAACCGTTGG
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