mRNA_M-pyrifera_M_contig84043.19609.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig84043.19609.1
Unique NamemRNA_M-pyrifera_M_contig84043.19609.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig84043.19609.1 vs. uniprot
Match: A0A351EYI4_9ACTN (DNA helicase n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A351EYI4_9ACTN)

HSP 1 Score: 299 bits (765), Expect = 1.250e-94
Identity = 166/297 (55.89%), Postives = 215/297 (72.39%), Query Frame = 1
Query:    1 TEDGIRDLVDEDGEVDAAIRASLVRQSADRAMHAIRRTAELEAMGEALAFGYTRSSDGERLNVGRLTVIDDDSGEAVLVDWRAPASIPFYRATPIDRLGVERRRHLIYQGE-----DLVAYADEVFDIDELVDGVGLRGEAAILAAVDAPTRDQMRSVVATIQAEQDAVVRAPSAGALVVQGGPGTGKTVVALHRAAYLLYENRAALSDTGVLIVGPSSEFLTYISGVLPSLGESGVISMTASELFAGILRGRTEDPAVAEVKGRAVMADVLANAVHDRQRRPSEALHTYYGSRRVV 876
            TEDG+RD+ DED + DAA++A+ VR+ A  AM A +R  E++++G+A AFG     DGE L VG+ +VID ++   +LVDWRA A+IPFYRA P++ LGV  RRHL Y  E     +LV Y+DEVFD   L    GL+GEAA+LA+++     QM SVVATIQAEQDAV+RA S   L+VQGGPGTGKTVVALHRAAYLLY+ R AL++ GVLIVGPS+ FL YIS VLPSLGE+GV+S   ++L+ G+L+G  E   V+ +KG+  M  +LAN+V +RQ RP+E L  +YGS RV 
Sbjct:   70 TEDGLRDIFDEDDDPDAAVQATFVREGAMYAMAAAKRFHEVDSIGDAPAFGRITDEDGENLYVGKCSVIDSEA--VLLVDWRARAAIPFYRAAPLEPLGVVHRRHLHYSPESSPPQELVGYSDEVFDTALLGTTTGLQGEAALLASLETGRTGQMSSVVATIQAEQDAVIRADSNEPLLVQGGPGTGKTVVALHRAAYLLYDQRQALAENGVLIVGPSTHFLAYISEVLPSLGETGVVSAVPAQLYPGVLKGLDELTEVSAIKGQVEMIALLANSVRNRQIRPTEDLLAWYGSDRVT 364          
BLAST of mRNA_M-pyrifera_M_contig84043.19609.1 vs. uniprot
Match: A0A7Y2GTA4_9ACTN (DNA helicase n=1 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A7Y2GTA4_9ACTN)

HSP 1 Score: 305 bits (781), Expect = 2.290e-94
Identity = 167/294 (56.80%), Postives = 211/294 (71.77%), Query Frame = 1
Query:    7 DGIRDLVDEDGEVDAAIRASLVRQSADRAMHAIRRTAELEAMGEALAFGYTRSSDGERLNVGRLTVIDDDSGEAVLVDWRAPASIPFYRATPIDRLGVERRR--HLIYQGED--LVAYADEVFDIDELVDGVGLRGEAAILAAVDAPTRDQMRSVVATIQAEQDAVVRAPSAGALVVQGGPGTGKTVVALHRAAYLLYENRAALSDTGVLIVGPSSEFLTYISGVLPSLGESGVISMTASELFAGILRGRTEDPAVAEVKGRAVMADVLANAVHDRQRRPSEALHTYYGSRRVV 876
            +GIRD++DED E D A+RA+ VRQ+A RAMHA  R  ELE  G ALAFG   + D   + VGRL+V + D    +LVDWRA A++PFYRATP++R GV  RR  H    G D  LV+++D++ +++ L     LRGEAA+LA+V APT + M+ VVA IQ+EQDA++RA +   L+VQGGPGTGKTVVALHRAAYLLY+ R  LSD GVLIVGP+  FL YIS VLPSLGE+GV+S T +ELF   LRG TE P V ++KG   M D+L  AV DRQRRP++ L  +YG+RRV 
Sbjct:   45 EGIRDIIDEDSEADTAVRAAQVRQTAIRAMHAANRVRELEGQGTALAFGRFSTDDDRHVYVGRLSVFEGD--HTLLVDWRASAAVPFYRATPLERYGVSTRRQFHFGDGGADAELVSFSDDLLNLEALDHASSLRGEAAVLASVTAPTTEHMKPVVALIQSEQDAIIRASADTPLIVQGGPGTGKTVVALHRAAYLLYDQRDELSDRGVLIVGPTPRFLRYISNVLPSLGETGVLSATPAELFPA-LRGHTEPPEVTKLKGSNAMVDLLNKAVRDRQRRPAQGLRLFYGARRVT 335          
BLAST of mRNA_M-pyrifera_M_contig84043.19609.1 vs. uniprot
Match: A0A7Y2IG52_9ACTN (DNA helicase n=1 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A7Y2IG52_9ACTN)

HSP 1 Score: 301 bits (772), Expect = 8.090e-93
Identity = 177/315 (56.19%), Postives = 213/315 (67.62%), Query Frame = 1
Query:    1 TEDGIRDLVDEDGEVDAAIRASLVRQSADRAMHAIRRTAELEAMGEALAFGY--TRSSDGERLN-VGRLTVIDDDSGEAVLVDWRAPASIPFYRATPIDRLGVERRRHLIYQGE-----------------DLVAYADEVFDIDELVDG---VGLRGEAAILAAVDAPTRDQMRSVVATIQAEQDAVVRAPSAGALVVQGGPGTGKTVVALHRAAYLLYENRAALSDTGVLIVGPSSEFLTYISGVLPSLGESGVISMTASELFAGILRGRTEDPAVAEVKGRAVMADVLANAVHDRQRRPSEALHTYYGSRRVV 876
            T +GIRD+VDED E D A+RA+ VR +A RAMHA  R  ELE  G ALAFG   T +++G   + VGRL+V D D  E +L+DWRAPA++PFYRATP+DR GV  RR   Y                    +LV Y+D+V +ID L D    + LRGEAA+LAAV +PT  QM+ VVA IQ+EQDAV+RAPS   L+VQGGPGTGKTVVALHRAAYLLY+ R  LSD G+LIVGP+  FL Y+S VLPSLGE+GV+S T +ELF    RG  E    A +KG+  M  +LA AV DR RRP E L  YYGSRRVV
Sbjct:   43 TAEGIRDIVDEDAEADTAVRAAEVRNAAIRAMHAANRVRELEGKGTALAFGRFTTDAANGSTKSYVGRLSVFDGD--ETLLIDWRAPAAVPFYRATPLDRHGVRTRRQFHYDNHLTQDRRSRASGQTGSSGELVGYSDDVLEIDALDDPAQTLNLRGEAAVLAAVSSPTTGQMKPVVAMIQSEQDAVIRAPSNVPLIVQGGPGTGKTVVALHRAAYLLYDQREELSDRGILIVGPTRRFLRYVSNVLPSLGETGVVSATPAELFPA-RRGGVEVDETARLKGQPEMVGLLARAVADRCRRPKEPLRLYYGSRRVV 354          
BLAST of mRNA_M-pyrifera_M_contig84043.19609.1 vs. uniprot
Match: A0A7Y3ET42_9ACTN (DNA helicase (Fragment) n=1 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A7Y3ET42_9ACTN)

HSP 1 Score: 274 bits (701), Expect = 5.420e-88
Identity = 159/270 (58.89%), Postives = 191/270 (70.74%), Query Frame = 1
Query:   28 DEDGEVDAAIRASLVRQSADRAMHAIRRTAELEAMGEALAFGYTRSSDGERLNVGRLTVIDDDSGEAVLVDWRAPASIPFYRATPIDRLGVERRRHLIYQGEDLVAYADEVFDIDELVDGVGLRGEAAILAAVDAPTRDQMRSVVATIQAEQDAVVRAPSAGALVVQGGPGTGKTVVALHRAAYLLYENRAALSDTGVLIVGPSSEFLTYISGVLPSLGESGVISMTASELFAGILRGRTEDPAVAEVKGRAVMADVLANAVHDRQRRPS 837
            DEDGE  +A  A+  R ++ RA+ A +R  ELEA G ALAFG     DG+ + VGR++VID D     L+DWRA A++PFYRATP++ LGV  RRHL Y   +L  Y+DEVFD D L+    LRGEAA+LA +   T  +M+SVVATIQAEQDAV+RA   G L+VQGGPGTGKTVVALHRAAYLLY +RAAL++TGVLIVGPS EFLTYIS VLPSLGESGV+SMT  +L  G+       P  A +KG A M   L  AV DRQR P+
Sbjct:   59 DEDGE--SAAEAATARAASARAVLAWKRVRELEAAGRALAFGRITGDDGD-MYVGRMSVIDGD--RVHLIDWRAAAAVPFYRATPLEPLGVAHRRHLHYTDGELTNYSDEVFDADALLTARQLRGEAALLADLARRTDGRMKSVVATIQAEQDAVIRASERGPLLVQGGPGTGKTVVALHRAAYLLYADRAALAETGVLIVGPSPEFLTYISDVLPSLGESGVVSMTVDQLHPGVRPVPDAAPERAALKGSAAMIKFLDAAVADRQRTPT 323          
BLAST of mRNA_M-pyrifera_M_contig84043.19609.1 vs. uniprot
Match: A0A520XYS0_9ACTN (DNA helicase n=1 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A520XYS0_9ACTN)

HSP 1 Score: 272 bits (695), Expect = 1.830e-84
Identity = 155/283 (54.77%), Postives = 201/283 (71.02%), Query Frame = 1
Query:   28 DEDGEVDAAIRASLVRQSADRAMHAIRRTAELEAMGEALAFGYTRSSDGERLN-VGRLTVIDDDSGEAVLVDWRAPASIPFYRATPIDRLGVERRRHLIYQGEDLVAYADEVFDIDELVDGVGLRGEAAILAAVDAPTRDQMRSVVATIQAEQDAVVRAPSAGALVVQGGPGTGKTVVALHRAAYLLYENRAALSDTGVLIVGPSSEFLTYISGVLPSLGESGVISMTASELFAGILRGRTEDPAVAEVKGRAVMADVLANAVHDRQRRPSEALHTYYGSRRV 873
            DEDGE  A       R +A   + A +R  +LE+ G+ALAFG  R +D E  N +GR +VI  D  + +L+DWRA A+ PFYRATP++ LG+  RRHL Y  ++L  Y+DE+F+ +++  G  LRGEAA+L  +   +  +M+SVVATIQAEQDAV+RA   G ++VQGGPGTGKTVVALHRAAYLLY +RAAL++TGVLIVGPS EFLTY+S VLPSLGESGV+S TA +L+ G+L        +A +KG  VM  +LA AV DRQR+P E L  +YGSRR+
Sbjct:   59 DEDGE--AXXXXXXXRTAAASVVKAWKRVRDLESGGDALAFG--RITDEEETNYIGRRSVIRGD--DVLLIDWRAAAATPFYRATPLEPLGLSHRRHLHYTNDELSNYSDEIFNPEDVPHGSHLRGEAALLTTLAGHSDGRMKSVVATIQAEQDAVIRASERGPVLVQGGPGTGKTVVALHRAAYLLYADRAALAETGVLIVGPSPEFLTYVSEVLPSLGESGVVSKTAEQLYIGVLVDPDPSIEMARLKGSDVMVKLLATAVRDRQRQPVEPLVVWYGSRRL 335          
BLAST of mRNA_M-pyrifera_M_contig84043.19609.1 vs. uniprot
Match: A0A2W4IPR5_9PSEU (DNA helicase (Fragment) n=1 Tax=Thermocrispum agreste TaxID=37925 RepID=A0A2W4IPR5_9PSEU)

HSP 1 Score: 244 bits (622), Expect = 1.130e-74
Identity = 133/245 (54.29%), Postives = 166/245 (67.76%), Query Frame = 1
Query:  109 RTAELEAMGEALAFGYTRSSDGERLNVGRLTVIDDDSG-EAVLVDWRAPASIPFYRATPIDRLGVERRRHLIYQGEDLVAYADEVFDIDELVDG--VGLRGEAAILAAVDAPTRDQMRSVVATIQAEQDAVVRAPSAGALVVQGGPGTGKTVVALHRAAYLLYENRAALSDTGVLIVGPSSEFLTYISGVLPSLGESGVISMTASELFAGILRGRTEDPAVAEVKGRAVMADVLANAVHDRQRRP 834
            R A+L  +   L FG   ++DG    +GR+ + D+D+  E +L+DWRAPA+ PFY AT     GV RRRH+  +  ++V Y DEV D+D    G  +GL GEAA+LAA++    DQMR +VATIQAEQD ++R+P  G LVVQGGPGTGKT VALHRAAYLLYE+R  LS  GVLIVGP+  FL YI  VLPSLGE+GV+  T  ELF G+     E P  AE+KGR VM +VL  AV DRQ+ P
Sbjct:   72 RLAQLNGVEAGLYFGRLDNTDGSITRIGRIGLFDEDADYEPLLIDWRAPAARPFYLATAASPQGVRRRRHVRLRLREVVGYDDEVLDLDSDEQGSDLGLAGEAALLAALNRQRGDQMRDIVATIQAEQDEIIRSPMGGVLVVQGGPGTGKTAVALHRAAYLLYEHRELLSSRGVLIVGPNRTFLHYIGQVLPSLGETGVLMATMGELFPGVRAQAQESPEAAEIKGRRVMVEVLRRAVADRQQVP 316          
BLAST of mRNA_M-pyrifera_M_contig84043.19609.1 vs. uniprot
Match: UPI00068D9961 (AAA family ATPase n=1 Tax=Cellulomonas sp. HZM TaxID=1454010 RepID=UPI00068D9961)

HSP 1 Score: 249 bits (637), Expect = 9.070e-74
Identity = 142/260 (54.62%), Postives = 176/260 (67.69%), Query Frame = 1
Query:  109 RTAELEAMGEALAFGYTRSSDGERLNVGRLTVIDDDSGEAVLVDWRAPASIPFYRATPIDRLGVERRRHLIYQGEDLVAYADEVFDIDELVDG----VGLRGEAAILAAVDAPTRDQMRSVVATIQAEQDAVVRAPSAGALVVQGGPGTGKTVVALHRAAYLLYENRAALSDTGVLIVGPSSEFLTYISGVLPSLGESGVISMTASELFAGILRGRTEDPAVAEVKGRAVMADVLANAVHDRQRRPSEALHTYYGSRRVV 876
            R A+LEA+ E LAFG     DG R  VGR+ + D +  + +L DWRAPA+  FYRAT     GV RRRHL+ +G  + A  DEV D+  +VDG     GL GE A+LAA+ A    +M  +VATIQAEQD ++R+   GALVVQGGPGTGKT VALHRAA+LLY +R  L  +GVL+VGPS  FL YI  VLPSLGE+GV++ T +EL  G+    TED AVAE+KGRAVMA V+A AV DR+R P+EA+      R VV
Sbjct:   61 RLAQLEAVEERLAFGRLDLEDGSRRYVGRIGLTDAEQSQ-LLTDWRAPAAQAFYRATAAHPDGVVRRRHLVTRGRSVTAVEDEVLDLTLVVDGDERLEGLSGEGALLAALGAGRTGRMGDIVATIQAEQDTIIRSELGGALVVQGGPGTGKTAVALHRAAFLLYAHRRTLERSGVLLVGPSRTFLRYIDQVLPSLGETGVVTTTVAELVPGVRATGTEDDAVAELKGRAVMARVIAKAVRDRERVPAEAVTVRIDGRTVV 319          
BLAST of mRNA_M-pyrifera_M_contig84043.19609.1 vs. uniprot
Match: UPI0018C1DED5 (AAA family ATPase n=1 Tax=Arthrobacter terrae TaxID=2935737 RepID=UPI0018C1DED5)

HSP 1 Score: 246 bits (629), Expect = 1.010e-72
Identity = 130/244 (53.28%), Postives = 169/244 (69.26%), Query Frame = 1
Query:  109 RTAELEAMGEALAFGYTRSSDGERLNVGRLTVIDDDSGEAVLVDWRAPASIPFYRATPIDRLGVERRRHLIYQGEDLVAYADEVFDIDELVDGVGLRGEAAILAAVDAPTRDQMRSVVATIQAEQDAVVRAPSAGALVVQGGPGTGKTVVALHRAAYLLYENRAALSDTGVLIVGPSSEFLTYISGVLPSLGESGVISMTASELFAGILRGRTEDPAVAEVKGRAVMADVLANAVHDRQRRPSE 840
            R A+L A+ + LAFG      GE   +GR+ +  +D  + ++VDWRAP +  FY+AT  +R GV RRRHLI  G D+ A  D+V D   LV+G  L+GE A+LAA+++    +M  +V TIQAEQD ++RAP +GALVVQGGPGTGKT VALHRAAYLLY +R  L   GVL+VGPSS F+ YI  VLPSLGE+GV+  +   L  GI+    EDP VAE+KGR +MADV+ NAV +RQR P++
Sbjct:   59 RLAQLNAVDDKLAFGRLDLDSGETRYIGRIGLSTEDL-QQLMVDWRAPEAGTFYQATAFERQGVRRRRHLILSGRDVKAIEDDVLDSQMLVEGTSLQGEGALLAALNSKRTGRMSDIVGTIQAEQDRIIRAPLSGALVVQGGPGTGKTAVALHRAAYLLYTHRDRLKSAGVLLVGPSSSFMKYIERVLPSLGETGVVMASVGRLMPGIVGAAGEDPEVAEIKGRLLMADVIRNAVANRQRIPAQ 301          
BLAST of mRNA_M-pyrifera_M_contig84043.19609.1 vs. uniprot
Match: A0A401UYA7_9CELL (DNA helicase n=1 Tax=Cellulomonas algicola TaxID=2071633 RepID=A0A401UYA7_9CELL)

HSP 1 Score: 246 bits (627), Expect = 2.070e-72
Identity = 140/261 (53.64%), Postives = 171/261 (65.52%), Query Frame = 1
Query:  109 RTAELEAMGEALAFGYTRSSDGERLNVGRLTVIDDDSGEAVLVDWRAPASIPFYRATPIDRLGVERRRHLIYQGEDLVAYADEVFDIDELVDG-----VGLRGEAAILAAVDAPTRDQMRSVVATIQAEQDAVVRAPSAGALVVQGGPGTGKTVVALHRAAYLLYENRAALSDTGVLIVGPSSEFLTYISGVLPSLGESGVISMTASELFAGILRGRTEDPAVAEVKGRAVMADVLANAVHDRQRRPSEALHTYYGSRRVV 876
            R A+LEA+ E L FG     DG R  VGR+ + D++    +L DWRAPA+ PFYRAT     GV RRRH++ +G  +    DEV D+D L DG      GL GE A+LA + A    +M  +VATIQAEQD ++R    GALVVQGGPGTGKT VALHRAAYLLY +R  L  +GVL+VGPS  FL YI  VLPSLGE+GV++ T +EL  GI+   TE  AVAE+KGRAVMA V+  AV DRQR P+EA       R +V
Sbjct:   61 RVAQLEAVEERLVFGRLDLEDGVRRYVGRIGLTDEEQSP-LLTDWRAPAAQPFYRATAAHPDGVVRRRHVVTRGRKVTGVEDEVLDLDLLTDGDDARLSGLSGEGALLAGLAAGRTGRMGDIVATIQAEQDRIIRDELTGALVVQGGPGTGKTAVALHRAAYLLYAHRRVLERSGVLLVGPSRTFLRYIDQVLPSLGETGVVTTTVAELVPGIVATGTEPEAVAELKGRAVMASVVGRAVRDRQRVPAEATTVRVDGRTIV 320          
BLAST of mRNA_M-pyrifera_M_contig84043.19609.1 vs. uniprot
Match: UPI001940BEEA (AAA family ATPase n=1 Tax=Actinoplanes cyaneus TaxID=52696 RepID=UPI001940BEEA)

HSP 1 Score: 245 bits (626), Expect = 3.150e-72
Identity = 135/246 (54.88%), Postives = 167/246 (67.89%), Query Frame = 1
Query:  109 RTAELEAMGEALAFGYTRSSDGERLNVGRLTVIDDDSGEAVLVDWRAPASIPFYRATPIDRLGVERRRHLIYQGEDLVAYADEVFDIDELVDGVGLRGEAAILAAVDAPTRDQMRSVVATIQAEQDAVVRAPSAGALVVQGGPGTGKTVVALHRAAYLLYENRAALSDTGVLIVGPSSEFLTYISGVLPSLGESGVISMTASELFAGILRGRTEDPAVAEVKGRAVMADVLANAVHDRQRRPSEAL 846
            R A+ EA+ E L FG     DG RL++GR+ +   D+GE +LVDWRAPA+ PFY AT I   GV  RRH+  +G  +VA  DE+ D+D    G  + GEAA++AA+ A    +MR +V TIQAEQD V+RA + G LVVQGGPGTGKT VALHRAAYLLY  R  LS  GVLIVGP++ FL YIS VLPSL E+GV+  T  +L+ GI     E P V E+KGRAVM  +LA AV DRQR P++ L
Sbjct:   55 RLAQYEAVEEGLCFGRLDLRDGGRLHIGRIGI--HDTGEPLLVDWRAPAARPFYVATAISPFGVTVRRHIRTKGRTVVALDDEILDLDAASPGASIVGEAALIAALSANRTGRMRDIVETIQAEQDRVIRAEAGGVLVVQGGPGTGKTAVALHRAAYLLYTYREQLSARGVLIVGPNATFLRYISQVLPSLAETGVLLATMGDLYPGITARHAEAPEVTEIKGRAVMTGLLAAAVRDRQRVPAQPL 298          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig84043.19609.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A351EYI4_9ACTN1.250e-9455.89DNA helicase n=1 Tax=Acidimicrobiaceae bacterium T... [more]
A0A7Y2GTA4_9ACTN2.290e-9456.80DNA helicase n=1 Tax=Acidimicrobiales bacterium Ta... [more]
A0A7Y2IG52_9ACTN8.090e-9356.19DNA helicase n=1 Tax=Acidimicrobiales bacterium Ta... [more]
A0A7Y3ET42_9ACTN5.420e-8858.89DNA helicase (Fragment) n=1 Tax=Acidimicrobiia bac... [more]
A0A520XYS0_9ACTN1.830e-8454.77DNA helicase n=1 Tax=Acidimicrobiales bacterium Ta... [more]
A0A2W4IPR5_9PSEU1.130e-7454.29DNA helicase (Fragment) n=1 Tax=Thermocrispum agre... [more]
UPI00068D99619.070e-7454.62AAA family ATPase n=1 Tax=Cellulomonas sp. HZM Tax... [more]
UPI0018C1DED51.010e-7253.28AAA family ATPase n=1 Tax=Arthrobacter terrae TaxI... [more]
A0A401UYA7_9CELL2.070e-7253.64DNA helicase n=1 Tax=Cellulomonas algicola TaxID=2... [more]
UPI001940BEEA3.150e-7254.88AAA family ATPase n=1 Tax=Actinoplanes cyaneus Tax... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig84043contigM-pyrifera_M_contig84043:3..878 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score252.3
Seed ortholog evalue2.8e-64
Seed eggNOG ortholog1454010.JEOE01000006_gene2134
Hectar predicted targeting categoryother localisation
EggNOG free text desc.AAA domain
EggNOG OGs2GK30@201174,4F0J5@85016,COG3973@1,COG3973@2
COG Functional cat.L
Best tax levelCellulomonadaceae
Best eggNOG OGNA|NA|NA
Exons1
Model size876
Cds size876
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816747.774268-CDS-M-pyrifera_M_contig84043:2..8781622816747.774268-CDS-M-pyrifera_M_contig84043:2..878Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig84043 3..878 -
1692278154.5449443-CDS-M-pyrifera_M_contig84043:2..8781692278154.5449443-CDS-M-pyrifera_M_contig84043:2..878Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig84043 3..878 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig84043.19609.1prot_M-pyrifera_M_contig84043.19609.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig84043 3..878 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig84043.19609.1

>prot_M-pyrifera_M_contig84043.19609.1 ID=prot_M-pyrifera_M_contig84043.19609.1|Name=mRNA_M-pyrifera_M_contig84043.19609.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=292bp
TEDGIRDLVDEDGEVDAAIRASLVRQSADRAMHAIRRTAELEAMGEALAF
GYTRSSDGERLNVGRLTVIDDDSGEAVLVDWRAPASIPFYRATPIDRLGV
ERRRHLIYQGEDLVAYADEVFDIDELVDGVGLRGEAAILAAVDAPTRDQM
RSVVATIQAEQDAVVRAPSAGALVVQGGPGTGKTVVALHRAAYLLYENRA
ALSDTGVLIVGPSSEFLTYISGVLPSLGESGVISMTASELFAGILRGRTE
DPAVAEVKGRAVMADVLANAVHDRQRRPSEALHTYYGSRRVV
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mRNA from alignment at M-pyrifera_M_contig84043:3..878-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig84043.19609.1 ID=mRNA_M-pyrifera_M_contig84043.19609.1|Name=mRNA_M-pyrifera_M_contig84043.19609.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=876bp|location=Sequence derived from alignment at M-pyrifera_M_contig84043:3..878- (Macrocystis pyrifera P11B4 male)
ACCGAAGACGGAATCCGCGACCTGGTCGACGAAGACGGCGAGGTCGATGC CGCGATCCGAGCCTCGCTCGTTCGCCAGTCGGCGGATCGGGCGATGCACG CCATCCGCCGCACCGCCGAACTCGAGGCGATGGGCGAGGCGCTCGCCTTC GGCTACACCCGTTCGTCCGACGGTGAACGACTGAACGTCGGCCGCCTCAC GGTGATCGACGACGACAGCGGGGAAGCGGTGCTGGTCGACTGGCGAGCGC CGGCCTCGATCCCGTTCTACCGAGCGACACCGATCGATCGGCTGGGCGTC GAACGCCGTCGACATCTGATCTATCAGGGGGAAGACCTGGTCGCCTACGC CGACGAGGTCTTCGACATCGACGAACTCGTCGACGGCGTCGGCCTGCGAG GCGAGGCCGCCATCCTCGCGGCGGTCGACGCCCCGACTCGCGACCAGATG CGCTCGGTCGTGGCCACCATCCAGGCCGAGCAGGATGCCGTCGTCCGGGC GCCGAGCGCCGGCGCGCTGGTCGTCCAGGGTGGCCCGGGCACCGGCAAGA CGGTGGTGGCGCTCCATCGTGCCGCCTACCTGCTGTACGAGAACCGAGCG GCACTGTCCGACACCGGTGTGTTGATCGTGGGTCCGAGCTCGGAGTTCCT CACCTACATCAGTGGTGTCCTTCCGTCTCTCGGCGAGTCCGGCGTTATCT CGATGACGGCGAGCGAACTCTTCGCCGGAATCCTCCGTGGACGAACCGAA GATCCCGCCGTCGCCGAGGTGAAGGGCAGGGCGGTGATGGCCGATGTGCT GGCCAACGCCGTGCACGATCGCCAGCGACGCCCATCGGAAGCTCTCCACA CCTACTACGGCTCTCGGCGGGTCGTG
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig84043:3..878-

>mRNA_M-pyrifera_M_contig84043.19609.1 ID=mRNA_M-pyrifera_M_contig84043.19609.1|Name=mRNA_M-pyrifera_M_contig84043.19609.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1752bp|location=Sequence derived from alignment at M-pyrifera_M_contig84043:3..878- (Macrocystis pyrifera P11B4 male)
ACCGAAGACGGAATCCGCGACCTGGTCGACGAAGACGGCGAGGTCGATGC
CGCGATCCGAGCCTCGCTCGTTCGCCAGTCGGCGGATCGGGCGATGCACG
CCATCCGCCGCACCGCCGAACTCGAGGCGATGGGCGAGGCGCTCGCCTTC
GGCTACACCCGTTCGTCCGACGGTGAACGACTGAACGTCGGCCGCCTCAC
GGTGATCGACGACGACAGCGGGGAAGCGGTGCTGGTCGACTGGCGAGCGC
CGGCCTCGATCCCGTTCTACCGAGCGACACCGATCGATCGGCTGGGCGTC
GAACGCCGTCGACATCTGATCTATCAGGGGGAAGACCTGGTCGCCTACGC
CGACGAGGTCTTCGACATCGACGAACTCGTCGACGGCGTCGGCCTGCGAG
GCGAGGCCGCCATCCTCGCGGCGGTCGACGCCCCGACTCGCGACCAGATG
CGCTCGGTCGTGGCCACCATCCAGGCCGAGCAGGATGCCGTCGTCCGGGC
GCCGAGCGCCGGCGCGCTGGTCGTCCAGGGTGGCCCGGGCACCGGCAAGA
CGGTGGTGGCGCTCCATCGTGCCGCCTACCTGCTGTACGAGAACCGAGCG
GCACTGTCCGACACCGGTGTGTTGATCGTGGGTCCGAGCTCGGAGTTCCT
CACCTACATCAGTGGTGTCCTTCCGTCTCTCGGCGAGTCCGGCGTTATCT
CGATGACGGCGAGCGAACTCTTCGCCGGAATCCTCCGTGGACGAACCGAA
GATCCCGCCGTCGCCGAGGTGAAGGGCAGGGCGGTGATGGCCGATGTGCT
GGCCAACGCCGTGCACGATCGCCAGCGACGCCCATCGGAAGCTCTCCACA
CCTACTACGGCTCTCGGCGGGTCGTGACCGAAGACGGAATCCGCGACCTG
GTCGACGAAGACGGCGAGGTCGATGCCGCGATCCGAGCCTCGCTCGTTCG
CCAGTCGGCGGATCGGGCGATGCACGCCATCCGCCGCACCGCCGAACTCG
AGGCGATGGGCGAGGCGCTCGCCTTCGGCTACACCCGTTCGTCCGACGGT
GAACGACTGAACGTCGGCCGCCTCACGGTGATCGACGACGACAGCGGGGA
AGCGGTGCTGGTCGACTGGCGAGCGCCGGCCTCGATCCCGTTCTACCGAG
CGACACCGATCGATCGGCTGGGCGTCGAACGCCGTCGACATCTGATCTAT
CAGGGGGAAGACCTGGTCGCCTACGCCGACGAGGTCTTCGACATCGACGA
ACTCGTCGACGGCGTCGGCCTGCGAGGCGAGGCCGCCATCCTCGCGGCGG
TCGACGCCCCGACTCGCGACCAGATGCGCTCGGTCGTGGCCACCATCCAG
GCCGAGCAGGATGCCGTCGTCCGGGCGCCGAGCGCCGGCGCGCTGGTCGT
CCAGGGTGGCCCGGGCACCGGCAAGACGGTGGTGGCGCTCCATCGTGCCG
CCTACCTGCTGTACGAGAACCGAGCGGCACTGTCCGACACCGGTGTGTTG
ATCGTGGGTCCGAGCTCGGAGTTCCTCACCTACATCAGTGGTGTCCTTCC
GTCTCTCGGCGAGTCCGGCGTTATCTCGATGACGGCGAGCGAACTCTTCG
CCGGAATCCTCCGTGGACGAACCGAAGATCCCGCCGTCGCCGAGGTGAAG
GGCAGGGCGGTGATGGCCGATGTGCTGGCCAACGCCGTGCACGATCGCCA
GCGACGCCCATCGGAAGCTCTCCACACCTACTACGGCTCTCGGCGGGTCG
TG
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