mRNA_M-pyrifera_M_contig84038.19606.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig84038.19606.1 vs. uniprot
Match: A0A7Y2DK64_9ACTN (DNA helicase n=1 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A7Y2DK64_9ACTN) HSP 1 Score: 265 bits (678), Expect = 8.420e-81 Identity = 150/283 (53.00%), Postives = 180/283 (63.60%), Query Frame = 1 Query: 4 GNAGLLTPHRHDAAVPTITAHPSEELEALGIADAIRAARSVGEPWSHQAVLVRTNAQLIPIEQALVKSGIPVRVRGGGGPLASQEVKSKLRELSRPGVDLARSVADLERSVAMPDDELGGVSEDLDADEASDRHLVPPVVIDLTERSAPLTPAEIDRRQNLAALANLVRDYLAVDPMPNGPGLAAWVATIQAGEVATNNDAVELATFHSAKGLEWPVVHLAGIEAGFVPISYAKTGGQLAEEQRLLYVAVTRAERELHITWAASRIFGTRSRKRTVSPYLEQI 852 G G LTP D VPT+TAH E EA IA+ +R R E W+ QAVLVRTNAQL+ IEQAL +GIPVR+RGG GPLA+ EVK +R L RPG+D A++V D ADE D PP L+P E +R N AL LVRDYLA D P+GP AW+AT+Q+ EV + DAV+L+TFH AKGLEW VVH+AG+E GFVPISYA+TG QLAEE+RLLYVAVTRA RELH+++A R F T+ R SPYL +I Sbjct: 297 GKGGDLTPQTSDGPVPTVTAHDDENEEATAIAERVRQTRDPAEGWNGQAVLVRTNAQLVVIEQALAAAGIPVRMRGGKGPLATPEVKEIIRRLGRPGIDFAQAV-------------------DAFADELED----PP---------DDLSPNEAERHANRQALLRLVRDYLAEDSQPSGPNFLAWLATVQSNEVHRDADAVDLSTFHGAKGLEWSVVHIAGLEQGFVPISYAETGAQLAEERRLLYVAVTRARRELHLSFAEQRTFRTKPAARRPSPYLAEI 547
BLAST of mRNA_M-pyrifera_M_contig84038.19606.1 vs. uniprot
Match: A0A7Y2N9M1_9ACTN (DNA helicase n=1 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A7Y2N9M1_9ACTN) HSP 1 Score: 261 bits (668), Expect = 2.640e-79 Identity = 140/287 (48.78%), Postives = 185/287 (64.46%), Query Frame = 1 Query: 4 GNAGLLTPHRHDAAVPTITAHPSEELEALGIADAIRAARSVGEPWSHQAVLVRTNAQLIPIEQALVKSGIPVRVRGGGGPLASQEVKSKLRELSRPGVDLARSV----ADLERSVAMPDDELGGVSEDLDADEASDRHLVPPVVIDLTERSAPLTPAEIDRRQNLAALANLVRDYLAVDPMPNGPGLAAWVATIQAGEVATNNDAVELATFHSAKGLEWPVVHLAGIEAGFVPISYAKTGGQLAEEQRLLYVAVTRAERELHITWAASRIFGTRSRKRTVSPYLEQI 852 G L ++ D VPT+ ++ E EA+GIADA+R +R+ E W+ QAVLVRTNAQL+PIEQAL +GIPVR+RGG GPLA+ EV+ ++ + RPG+D +++V A+LE + P +P E +R N AL ++R+Y VDP P+GP AW+ATIQA EV ++DAV+L+TFH +KGLEWPVVHLAG+E GFVPISYA+TG QLAEE+RLLYVA+TRAERELH+++A R F T+ R SPYL +I Sbjct: 297 GKGNDLIANQGDGPVPTVESYEDETAEAIGIADAVRQSRAPSEGWNGQAVLVRTNAQLVPIEQALAGAGIPVRIRGGKGPLATPEVREVIKRIGRPGIDFSQAVETFAAELEEPLEDP------------------------------------SPNEAERYANKQALLQVIRNYTVVDPRPSGPDFLAWLATIQANEVHRDSDAVDLSTFHGSKGLEWPVVHLAGLEQGFVPISYAETGAQLAEERRLLYVAITRAERELHLSYAEERTFRTKPTSRRPSPYLGEI 547
BLAST of mRNA_M-pyrifera_M_contig84038.19606.1 vs. uniprot
Match: UPI0020176A22 (ATP-dependent DNA helicase UvrD2 n=2 Tax=Rhabdothermincola sp. EGI L10124 TaxID=2903142 RepID=UPI0020176A22) HSP 1 Score: 238 bits (607), Expect = 6.350e-70 Identity = 138/281 (49.11%), Postives = 169/281 (60.14%), Query Frame = 1 Query: 13 GLLTPHRHDAAVPTITAHPSEELEALGIADAIRAARSVGEPWSHQAVLVRTNAQLIPIEQALVKSGIPVRVRGGGGPLASQEVKSKLRELSRPGVDLARSVADLERSVAMPDDELGGVSEDLDADEASDRHLVPPVVIDLTERSAPLTPAEIDRRQNLAALANLVRDYLAVDPMPNGPGLAAWV-ATIQAGEVATNNDAVELATFHSAKGLEWPVVHLAGIEAGFVPISYAKTGGQLAEEQRLLYVAVTRAERELHITWAASRIFGTRSRKRTVSPYLEQI 852 G L R + VPT+TAH + EA GIA A+R G PWS QAVLVRTNAQ+ +E+AL + GIP RVRGG L EVK+ LR + R ++ADLE +VA PD G +E +RR NL AL L DY AV+P+P+ PG W+ AT +A + + DAVE+ATFH+AKGLEWPVVHLAG+E G VPI +A+TG LAEE RL YVA+TRAEREL +TWAA R FGTR+ KR SPYLE + Sbjct: 325 GALVATRPEGPVPTVTAHDDDRAEARGIARAVRDQHRPGSPWSAQAVLVRTNAQITLLEEALHEVGIPFRVRGGAALLDQPEVKAALRTVQRATGGFPEALADLEAAVADPDGTEGDRAE--------------------------------ERRANLEALVRLAHDYTAVEPVPSVPGFLTWLRATTRADQPDRHGDAVEIATFHAAKGLEWPVVHLAGLEQGLVPIGHARTGEALAEELRLFYVALTRAERELCLTWAAERTFGTRAMKRDRSPYLETV 573
BLAST of mRNA_M-pyrifera_M_contig84038.19606.1 vs. uniprot
Match: UPI001F3B463F (ATP-dependent DNA helicase UvrD2 n=1 Tax=Rhabdothermincola sediminis TaxID=2751370 RepID=UPI001F3B463F) HSP 1 Score: 213 bits (542), Expect = 6.320e-61 Identity = 126/284 (44.37%), Postives = 165/284 (58.10%), Query Frame = 1 Query: 4 GNAGLLTPHRHDAAVPTITAHPSEELEALGIADAIRAARSVGEPWSHQAVLVRTNAQLIPIEQALVKSGIPVRVRGGGGPLASQEVKSKLRELSRPGVDLARSVADLERSVAMPDDELGGVSEDLDADEASDRHLVPPVVIDLTERSAPLTPAEIDRRQNLAALANLVRDYLAVDPMPNGPGLAAWV-ATIQAGEVATNNDAVELATFHSAKGLEWPVVHLAGIEAGFVPISYAKTGGQLAEEQRLLYVAVTRAERELHITWAASRIFGTRSRKRTVSPYLEQI 852 G AG L HR D VP + + P E EA GIA A+R G W+ QAVLVRTNAQ+ +E+A + +P RVRG G L +VK++LREL + +LA ++ADLE + A EL +D A +R N+ AL L RDY A+DP + G AW+ T +A + DAVE+ATFH+AKGLEWP+VH+AG+E G VPI++A+T LAEE+RLLYVAVTRAE++L +WA R +G R+ R SPYLE I Sbjct: 277 GQAGALRAHRPDGPVPLVRSFPHERAEAAGIARAVRDHHHPGARWASQAVLVRTNAQIALLEEAFRAARVPFRVRGNGALLDQPDVKARLRELHQTARELATAIADLEVAAA----ELRAADDD----------------------------ASAERAGNVEALVQLARDYAALDPAGSVEGFLAWLRTTTRADQPDVVGDAVEIATFHAAKGLEWPIVHIAGLEQGLVPIAHARTPAALAEERRLLYVAVTRAEQQLLCSWAEHRTYGERTVPREASPYLEAI 528
BLAST of mRNA_M-pyrifera_M_contig84038.19606.1 vs. uniprot
Match: A0A6J6JLY4_9ZZZZ (DNA helicase n=1 Tax=freshwater metagenome TaxID=449393 RepID=A0A6J6JLY4_9ZZZZ) HSP 1 Score: 197 bits (500), Expect = 4.890e-57 Identity = 124/279 (44.44%), Postives = 159/279 (56.99%), Query Frame = 1 Query: 13 GLLTPHRHDAAVPTITAHPSEELEALGIADAIRAARSVGEPWSHQAVLVRTNAQLIPIEQALVKSGIPVRVRGGGGPLASQEVKSKLRELSRPGVDLARSVADLERSVAMPDDELGGVSEDLDADEASDRHLVPPVVIDLTERSAPLTPAEIDRRQNLAALANLVRDYLAVDPMPNGPGLAAWV-ATIQAGEVATNNDAVELATFHSAKGLEWPVVHLAGIEAGFVPISYAKTGGQLAEEQRLLYVAVTRAERELHITWAASRIFGTRSRKRTVSPYLE 846 G + R D VP++ P E EA IA A R G WS+QAVLVRTNAQL IE+A+ +GIP RVRG L EVK+ L +L R + ++ DL SV + D+ SE ++R+A +RR NL AL + RDY+A++ P G W+ AT +A + N +A+EL TFH+AKGLEWP+VHLAGIE G+VPI +AKT G AEE+RL YVA TRAEREL TWA SR FG R+ R S +L+ Sbjct: 12 GTQSATRPDGGVPSVRELPDERAEAAAIARAARDRHGPGARWSNQAVLVRTNAQLPIIEEAMKSAGIPFRVRGATPLLDQPEVKAALGDLRRTPRPFSDAIHDLALSVVVDDE-----SE--------------------SDRAA-------ERRANLDALVQMARDYMAIESPPTANGFFLWLTATTRADQPDPNGEAIELLTFHAAKGLEWPIVHLAGIEQGYVPIGHAKTPGAWAEERRLFYVAATRAERELLCTWAKSRTFGERAIPRDRSEFLD 258
BLAST of mRNA_M-pyrifera_M_contig84038.19606.1 vs. uniprot
Match: A0A538GW74_9ACTN (DNA helicase n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A538GW74_9ACTN) HSP 1 Score: 203 bits (517), Expect = 8.920e-57 Identity = 127/281 (45.20%), Postives = 156/281 (55.52%), Query Frame = 1 Query: 19 LTPHRHDAAVPTITAHPSEELEALGIADAIRAARSVGEPWSHQAVLVRTNAQLIPIEQALVKSGIPVRVRGGGGPLASQEVKSKLRELSRPG--VDLARSVADLERSVAMPDDELGGVSEDLDADEASDRHLVPPVVIDLTERSAPLTPAEIDRRQNLAALANLVRDYLAVDPMPNGPGLAAWVA-TIQAGEVATNNDAVELATFHSAKGLEWPVVHLAGIEAGFVPISYAKTGGQLAEEQRLLYVAVTRAERELHITWAASRIFGTRSRKRTVSPYLEQI 852 L P+R D VPT+T HP++ EA +A A+R G PWS AVL RTNAQ + E+A + +P RVRGGG L EVK L +L R V A +ADLE AM DE GG E RR ++ AL L R+Y A DP + G W+A T++A E DAV+L TFH AKGLEWPVV LAG+E G VPI +A T AEE+RLLYVA+TRAERELH +WA R FG+R++ RT SPYL + Sbjct: 372 LRPNRGDGPVPTVTCHPTDVDEARAVARALRDRHGPGRPWSQLAVLTRTNAQSVLFEEAFRAARVPYRVRGGGAFLDQPEVKDALADLRRSPARVPFASQLADLE---AMAVDE-GGTDE---------------------------------RRLHIDALVRLGREYTAADPAASASGFLGWLAATVRADEPEQAGDAVQLVTFHRAKGLEWPVVFLAGLERGLVPIGHATTPEDRAEERRLLYVAITRAERELHCSWAERRTFGSRTQTRTASPYLSAV 615
BLAST of mRNA_M-pyrifera_M_contig84038.19606.1 vs. uniprot
Match: A0A5Q2RNP1_9ACTN (DNA helicase n=1 Tax=Actinomarinicola tropica TaxID=2789776 RepID=A0A5Q2RNP1_9ACTN) HSP 1 Score: 202 bits (513), Expect = 1.670e-56 Identity = 127/284 (44.72%), Postives = 159/284 (55.99%), Query Frame = 1 Query: 19 LTPHRHDAAVPTITAHPSEELEALGIADAIRAARSVGEPWSHQAVLVRTNAQLIPIEQALVKSGIPVRVRGGGGPLASQEVKSKLRELSRPGVDLARSVADLERSV-----AMPDDELGGVSEDLDADEASDRHLVPPVVIDLTERSAPLTPAEIDRRQNLAALANLVRDYLAVDPMPNGPGLAAWV-ATIQAGEVATNNDAVELATFHSAKGLEWPVVHLAGIEAGFVPISYAKTGGQLAEEQRLLYVAVTRAERELHITWAASRIFGTRSRKRTVSPYLEQI 852 L +R D P I + PS+ EA GIA A+R AR+ WS QAVLVRTNAQ + +AL +GIP RVRGG G L EV++ L L R ++ADLE ++ A PDDE D + A +RR NL L L RDY +D P G AW+ AT+ G A + DAV++ TFH+AKGLEWPVVHLAG+E G+VPI +A T LAEE+RL YVAVTRAE L +WA +R FG R+ +R SPYL Q+ Sbjct: 301 LRANRPDGPAPLIRSFPSDAAEARGIARAVRDARAPNARWSTQAVLVRTNAQTALLSEALQAAGIPHRVRGGTGLLEQAEVRTALAGLRRHHGAFDVAIADLEATIEPEPTADPDDEAAAAPTDT-------------------------SDAVAERRANLEMLVRLARDYQRIDLAPTSDGFLAWLRATV--GSDAPDRDAVDVTTFHAAKGLEWPVVHLAGLEQGYVPIGHATTPAALAEERRLFYVAVTRAEERLLCSWAETRTFGQRTAQREPSPYLVQV 557
BLAST of mRNA_M-pyrifera_M_contig84038.19606.1 vs. uniprot
Match: A0A538LRF8_9ACTN (DNA helicase n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A538LRF8_9ACTN) HSP 1 Score: 202 bits (514), Expect = 1.760e-56 Identity = 129/285 (45.26%), Postives = 159/285 (55.79%), Query Frame = 1 Query: 7 NAGLLTPHRHDAAVPTITAHPSEELEALGIADAIRAARSVGEPWSHQAVLVRTNAQLIPIEQALVKSGIPVRVRGGGGPLASQEVKSKLRELSRPGV--DLARSVADLERSVAMPDDELGGVSEDLDADEASDRHLVPPVVIDLTERSAPLTPAEIDRRQNLAALANLVRDYLAVDPMPNGPGLAAWVATIQAGEVATNN-DAVELATFHSAKGLEWPVVHLAGIEAGFVPISYAKTGGQLAEEQRLLYVAVTRAERELHITWAASRIFGTRSRKRTVSPYLEQI 852 NA LL + D VPT+TA S+ EA IA +R R G PW+H AVL RTNAQL+ +E+AL + IP RV GG L EV+ L +L R V +ADLE VA G+ + + P P E DRR +L L L R+Y A+DP + G +AW+A E A + DAVEL TFH AKGLEWPVV LAG+E G VPI A T AEE+RLLYVA+TRAERELH +WA R FG+R+ RT SPYL+ + Sbjct: 305 NADLLRATQADGPVPTVTASDSDVSEARTIASRLRRTRRPGMPWAHLAVLTRTNAQLVLLEEALRSARIPYRVSGGEAFLERPEVRDALDDLRRAPVRTPFGARLADLEARVA-------GIGTAGPGGRPEETXXXXXXXXXXXXTAGPGRPDEDDRRSHLEGLVRLGREYEAMDPAASAEGFSAWLAATVRSEGAEDGADAVELTTFHRAKGLEWPVVFLAGLERGLVPIGRAATPAAEAEERRLLYVALTRAERELHCSWAERRTFGSRTVTRTRSPYLDAV 582
BLAST of mRNA_M-pyrifera_M_contig84038.19606.1 vs. uniprot
Match: A0A7K1BKC4_9ACTN (DNA helicase n=15 Tax=root TaxID=1 RepID=A0A7K1BKC4_9ACTN) HSP 1 Score: 197 bits (502), Expect = 7.080e-55 Identity = 124/279 (44.44%), Postives = 159/279 (56.99%), Query Frame = 1 Query: 13 GLLTPHRHDAAVPTITAHPSEELEALGIADAIRAARSVGEPWSHQAVLVRTNAQLIPIEQALVKSGIPVRVRGGGGPLASQEVKSKLRELSRPGVDLARSVADLERSVAMPDDELGGVSEDLDADEASDRHLVPPVVIDLTERSAPLTPAEIDRRQNLAALANLVRDYLAVDPMPNGPGLAAWV-ATIQAGEVATNNDAVELATFHSAKGLEWPVVHLAGIEAGFVPISYAKTGGQLAEEQRLLYVAVTRAERELHITWAASRIFGTRSRKRTVSPYLE 846 G + R D VP++ P E EA IA A R G WS+QAVLVRTNAQL IE+A+ +GIP RVRG L E+K+ L +L R + ++ DL SV + D+ SE ++R+A +RR NL AL + RDY+A++ P G W+ AT +A + N +A+EL TFH+AKGLEWP+VHLAGIE G+VPI +AKT G AEE+RL YVA TRAEREL TWA SR FG RS R S +L+ Sbjct: 306 GTQSATRPDGGVPSVRELPDERAEAAAIARAARDRHGPGARWSNQAVLVRTNAQLPIIEEAMKSAGIPFRVRGATPLLDQPEIKAALGDLRRTPRPFSDAIHDLALSVVVDDE-----SE--------------------SDRAA-------ERRANLDALVQMARDYMAIESPPTANGFFLWLTATTRADQPDPNGEAIELLTFHAAKGLEWPIVHLAGIEQGYVPIGHAKTPGAWAEERRLFYVAATRAERELLCTWAKSRTFGERSIPRDRSEFLD 552
BLAST of mRNA_M-pyrifera_M_contig84038.19606.1 vs. uniprot
Match: A0A6J7IRY6_9ZZZZ (DNA helicase n=1 Tax=freshwater metagenome TaxID=449393 RepID=A0A6J7IRY6_9ZZZZ) HSP 1 Score: 197 bits (501), Expect = 1.060e-54 Identity = 124/279 (44.44%), Postives = 160/279 (57.35%), Query Frame = 1 Query: 13 GLLTPHRHDAAVPTITAHPSEELEALGIADAIRAARSVGEPWSHQAVLVRTNAQLIPIEQALVKSGIPVRVRGGGGPLASQEVKSKLRELSRPGVDLARSVADLERSVAMPDDELGGVSEDLDADEASDRHLVPPVVIDLTERSAPLTPAEIDRRQNLAALANLVRDYLAVDPMPNGPGLAAWV-ATIQAGEVATNNDAVELATFHSAKGLEWPVVHLAGIEAGFVPISYAKTGGQLAEEQRLLYVAVTRAERELHITWAASRIFGTRSRKRTVSPYLE 846 G + R D VP++ P E EA IA A R G WS+QAVLVRTNAQL IE+A+ +GIP RVRG L EVK+ L +L R + ++ DL SV + D+ SE ++R+A +RR NL AL + RDY+A++ P+ G W+ AT +A + N +A+EL TFH+AKGLEWP+VHLAGIE G+VPI +AKT G AEE+RL YVA TRAEREL TWA SR FG R+ R S +L+ Sbjct: 312 GTQSATRPDGGVPSVRELPDERAEAAAIARAARDRHGPGARWSNQAVLVRTNAQLPIIEEAMKSAGIPFRVRGATPLLDQPEVKAALGDLRRTPRPFSDAIHDLALSVVVDDE-----SE--------------------SDRAA-------ERRANLDALVQMARDYMAIESPPSANGFFLWLTATTRADQPDPNGEAIELLTFHAAKGLEWPIVHLAGIEQGYVPIGHAKTPGAWAEERRLFYVAATRAERELLCTWAKSRTFGERAIPRDRSEFLD 558 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig84038.19606.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig84038.19606.1 >prot_M-pyrifera_M_contig84038.19606.1 ID=prot_M-pyrifera_M_contig84038.19606.1|Name=mRNA_M-pyrifera_M_contig84038.19606.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=284bp DGNAGLLTPHRHDAAVPTITAHPSEELEALGIADAIRAARSVGEPWSHQAback to top mRNA from alignment at M-pyrifera_M_contig84038:29..880+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig84038.19606.1 ID=mRNA_M-pyrifera_M_contig84038.19606.1|Name=mRNA_M-pyrifera_M_contig84038.19606.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=852bp|location=Sequence derived from alignment at M-pyrifera_M_contig84038:29..880+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig84038:29..880+ >mRNA_M-pyrifera_M_contig84038.19606.1 ID=mRNA_M-pyrifera_M_contig84038.19606.1|Name=mRNA_M-pyrifera_M_contig84038.19606.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1704bp|location=Sequence derived from alignment at M-pyrifera_M_contig84038:29..880+ (Macrocystis pyrifera P11B4 male)back to top |