mRNA_M-pyrifera_M_contig83932.19591.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig83932.19591.1
Unique NamemRNA_M-pyrifera_M_contig83932.19591.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig83932.19591.1 vs. uniprot
Match: A0A7S4HWT0_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Vannella sp. CB-2014 TaxID=1487602 RepID=A0A7S4HWT0_9EUKA)

HSP 1 Score: 271 bits (693), Expect = 3.330e-81
Identity = 137/231 (59.31%), Postives = 178/231 (77.06%), Query Frame = 1
Query:    1 ELPLLDNVSGYVQPGMVVAFMGPSGAGKTTLLDVLSLRKTAGRMTGTIKINGQPMDTDMFPRYSGYVEQMNLHVETETVKEALELAAKLRLDYSSEFRAEGMKLTWAQRHAHIAWVMEVLGLWQVRHAMIQELNLEQKKRVTIGVELAANPSLLWLDEPTTGLDGLAALRIMQAVQDIAKSGVAVVCTLHQPSKQIFSMCSDLLLLRPGGKVGYFGSIADGGAEAAGFFEK 693
            +L L++NV GYV+PGM+VAFMGPSGAGKTTLLDVL+ RK+ G++TG I++NG P+D ++  R SGYVEQ N+HVETETV+EAL ++A LRL +  +       +T   R  H+AWVM VL L  +R A+I EL+LEQKKR+TIGVELAANPSLLWLDEPT+GLD +AAL +M+AV+ I++ GVAV+CTLHQPS+ +FS  + LLLL PGGK+ +FG  +D    A  FF +
Sbjct:  757 DLVLVNNVYGYVKPGMLVAFMGPSGAGKTTLLDVLAQRKSVGKITGEIRMNGAPIDPEILARVSGYVEQQNIHVETETVEEALVMSASLRLSFPVDSDNSTHTITRRDRLEHVAWVMNVLSLSSIRGALISELSLEQKKRLTIGVELAANPSLLWLDEPTSGLDSMAALSVMRAVKRISEQGVAVICTLHQPSELLFSWSTHLLLLAPGGKMVFFGESSDNNHSAKLFFSQ 987          
BLAST of mRNA_M-pyrifera_M_contig83932.19591.1 vs. uniprot
Match: A0A084G7R5_PSEDA (Uncharacterized protein n=1 Tax=Pseudallescheria apiosperma TaxID=563466 RepID=A0A084G7R5_PSEDA)

HSP 1 Score: 211 bits (538), Expect = 2.880e-59
Identity = 107/230 (46.52%), Postives = 159/230 (69.13%), Query Frame = 1
Query:   10 LLDNVSGYVQPGMVVAFMGPSGAGKTTLLDVLSLRKTAGRMTGTIKINGQPMDTDMFPRYSGYVEQMNLHVETETVKEALELAAKLRLDYSSEFRAEGMKLTWAQRHAHIAWVMEVLGLWQVRHAMIQELNLEQKKRVTIGVELAANPSLLWLDEPTTGLDGLAALRIMQAVQDIAKSGVAVVCTLHQPSKQIFSMCSDLLLLRPGGKVGYFGSIADGGAEAAGFFEKQG 699
            +L+ VSGY +PG+++A MG SGAGKTTLL+VLS RKT+G ++G + ++G+P+  D F R +GYVEQM+LH ET T++EALE +A LR  ++   R         ++  ++  ++ +LGLW ++ A+I+ L+++QKKRVTIGVELAA+PSL++LDEPT+GLD  +A  I+Q ++ +  SG A+VCT+HQPS  +      +L L P G V YFG + D G     +F  +G
Sbjct:  817 ILNQVSGYAKPGVMIALMGASGAGKTTLLNVLSQRKTSGTVSGEVLLDGRPLGRD-FQRTTGYVEQMDLHEETATIREALEFSAVLRQSHTIHHR---------KKKEYVEKILNLLGLWDIQDAIIRSLSVDQKKRVTIGVELAASPSLIFLDEPTSGLDSQSAFSIVQFLRQLCNSGHAIVCTIHQPSMDLIQQFDMILALDPSGAVFYFGPVGDNGTAVTTYFRDRG 1036          
BLAST of mRNA_M-pyrifera_M_contig83932.19591.1 vs. uniprot
Match: A0A2D4CC60_PYTIN (Pleiotropic drug resistance transporter n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CC60_PYTIN)

HSP 1 Score: 207 bits (526), Expect = 2.330e-58
Identity = 112/232 (48.28%), Postives = 154/232 (66.38%), Query Frame = 1
Query:    1 ELPLLDNVSGYVQPGMVVAFMGPSGAGKTTLLDVLSLRKTAGRMTGTIKINGQPMDTDMFPRYSGYVEQMNLHVETETVKEALELAAKLRLD--YSSEFRAEGMKLTWAQRHAHIAWVMEVLGLWQVRHAMIQELNLEQKKRVTIGVELAANPSLLWLDEPTTGLDGLAALRIMQAVQDIAKSGVAVVCTLHQPSKQIFSMCSDLLLLRPGGKVGYFGSIADGGAEAAGFFE 690
            EL LL NVS +  PG + A MG SGAGKTTL+DVL+ RKT GR+TG I +NG+P +   F R +GYVEQM++H    T++EAL  +A+LRL    S E R E +K            VM++L L  + H +++  ++EQKKR+TIGVE+ ANPS+L+LDEPT+GLD  +A  +M+ VQ IA++G  V+CT+HQPS QIF +   LLLL+ GG V +FG +  G      +F+
Sbjct:  223 ELQLLHNVSVHFTPGKMTALMGSSGAGKTTLMDVLAGRKTGGRITGDILVNGEPKNPMTFSRIAGYVEQMDIHSGGATIEEALHFSARLRLPSGISEEGRNEAVKN-----------VMDLLELHPIAHDLVRNCSIEQKKRITIGVEVVANPSILFLDEPTSGLDARSASLVMKGVQSIARTGRTVLCTIHQPSTQIFEVFDALLLLQKGGFVAFFGDLGTGSERLVDYFQ 443          
BLAST of mRNA_M-pyrifera_M_contig83932.19591.1 vs. uniprot
Match: A0A1J3K5B1_NOCCA (Pleiotropic drug resistance protein 12 (Fragment) n=1 Tax=Noccaea caerulescens TaxID=107243 RepID=A0A1J3K5B1_NOCCA)

HSP 1 Score: 202 bits (515), Expect = 2.840e-58
Identity = 114/232 (49.14%), Postives = 156/232 (67.24%), Query Frame = 1
Query:   10 LLDNVSGYVQPGMVVAFMGPSGAGKTTLLDVLSLRKTAGRMTGTIKINGQPMDTDMFPRYSGYVEQMNLHVETETVKEALELAAKLRLDYSSEFRAEGMKLTWAQRHAHIAWVMEVLGLWQVRHAMIQE-----LNLEQKKRVTIGVELAANPSLLWLDEPTTGLDGLAALRIMQAVQDIAKSGVAVVCTLHQPSKQIFSMCSDLLLLRPGGKVGYFGSIADGGAEAAGFFE 690
            LL++VSGY +PG + A MG SGAGKTTL+DV++ RKTAG++ G I +NG P     F R +GYVEQ ++H  T+TV+EAL  +A+LRL  +         +T  QR A +  V+ +L L Q+   MI +     L+  Q KRVTIGVEL ANPS+L+LDEPT+GLD  AAL +M+ ++ IA +G +VVCT+HQPS ++F M   LLLL+ GGK  +FG I + G+E   +FE
Sbjct:  196 LLEDVSGYAKPGTLTALMGSSGAGKTTLMDVIAGRKTAGKIEGAILVNGYPKHDATFSRVAGYVEQTDVHTPTDTVREALTFSARLRLPDT---------VTQEQRIAFVDEVLHILELDQLADRMIGDEITPGLSNGQLKRVTIGVELVANPSILFLDEPTSGLDSRAALVVMRVIKRIASTGRSVVCTIHQPSAELFYMFDRLLLLKSGGKEVFFGDIGEEGSELVHYFE 418          
BLAST of mRNA_M-pyrifera_M_contig83932.19591.1 vs. uniprot
Match: A0A7S0BS14_9RHOD (Probable ATP-dependent transporter ycf16 (Fragment) n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0BS14_9RHOD)

HSP 1 Score: 202 bits (514), Expect = 5.870e-57
Identity = 110/236 (46.61%), Postives = 158/236 (66.95%), Query Frame = 1
Query:   10 LLDNVSGYVQPGMVVAFMGPSGAGKTTLLDVLSLRKTAGRMTGTIKINGQPMDTDMFPRYSGYVEQMNLHVETETVKEALELAAKLRLDYSSEFRAEGMKLTWAQRHAHIAWVMEVLGLWQVRHAMIQ------ELNLEQKKRVTIGVELAANPSLLWLDEPTTGLDGLAALRIMQAVQDIAKSGVAVVCTLHQPSKQIFSMCSDLLLLRPGGKVGYFGSIADGGAEAAGFFEKQG 699
            LL +V GY  PG + A MG SGAGKTTL+DVL+ RKT G +TG + +NG P D  +F R SGYVEQM++HV   TV+EA+E +A+LRL        EG   T  +R   +   +++L L +++H ++        L+ EQ+KR+TI VEL   PS+L+LDEPT+GLD  AAL++  A++ ++ +GVAV+CT+HQPSK++FS    LLLL+ GG+V YFG + +  ++   +FEK G
Sbjct:  435 LLHDVCGYALPGRLCALMGSSGAGKTTLMDVLARRKTKGTITGEVLVNGYPQDA-LFGRVSGYVEQMDIHVSKTTVREAIEFSARLRLP-------EGT--TAEERQEQVEKTIDLLELRELQHELVGIPGAAISLSSEQRKRLTIAVELVVRPSILFLDEPTSGLDSRAALKVANAMRRVSDTGVAVLCTIHQPSKEVFSCFDSLLLLQRGGRVVYFGDLGEQASQMIDYFEKNG 660          
BLAST of mRNA_M-pyrifera_M_contig83932.19591.1 vs. uniprot
Match: A0A7S3EGH3_9RHOD (Probable ATP-dependent transporter ycf16 n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3EGH3_9RHOD)

HSP 1 Score: 204 bits (519), Expect = 8.110e-57
Identity = 109/236 (46.19%), Postives = 158/236 (66.95%), Query Frame = 1
Query:   10 LLDNVSGYVQPGMVVAFMGPSGAGKTTLLDVLSLRKTAGRMTGTIKINGQPMDTDMFPRYSGYVEQMNLHVETETVKEALELAAKLRLDYSSEFRAEGMKLTWAQRHAHIAWVMEVLGLWQVRHAMIQ------ELNLEQKKRVTIGVELAANPSLLWLDEPTTGLDGLAALRIMQAVQDIAKSGVAVVCTLHQPSKQIFSMCSDLLLLRPGGKVGYFGSIADGGAEAAGFFEKQG 699
            LL  V GY  PG + A MG SGAGKTTL+DVL+ RKT G +TG + +NG P D+ +F R SGYVEQM++HV   TV+EA+E +A+LRL            +T A+R   +   +++L L +++H ++        L+ EQ+KR+TI VEL   PS+L+LDEPT+GLD  AAL++  A++ ++ +GVAV+CT+HQPSK++FS    LLLL+ GG+V YFG + +  ++   +FEK G
Sbjct:  786 LLHEVCGYALPGRLCALMGSSGAGKTTLMDVLARRKTKGTITGDVLVNGYPQDS-LFGRVSGYVEQMDIHVSKTTVREAIEFSARLRLPED---------VTKAEREDQVEKTIDLLELREIQHELVGIPGAAIGLSSEQRKRLTIAVELVVRPSILFLDEPTSGLDSRAALKVANAMRRVSDTGVAVLCTIHQPSKEVFSCFDSLLLLQRGGRVVYFGDLGEQASQMLAYFEKNG 1011          
BLAST of mRNA_M-pyrifera_M_contig83932.19591.1 vs. uniprot
Match: A0A7S2ZVF9_9RHOD (Probable ATP-dependent transporter ycf16 n=5 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZVF9_9RHOD)

HSP 1 Score: 204 bits (519), Expect = 1.010e-56
Identity = 109/236 (46.19%), Postives = 158/236 (66.95%), Query Frame = 1
Query:   10 LLDNVSGYVQPGMVVAFMGPSGAGKTTLLDVLSLRKTAGRMTGTIKINGQPMDTDMFPRYSGYVEQMNLHVETETVKEALELAAKLRLDYSSEFRAEGMKLTWAQRHAHIAWVMEVLGLWQVRHAMIQ------ELNLEQKKRVTIGVELAANPSLLWLDEPTTGLDGLAALRIMQAVQDIAKSGVAVVCTLHQPSKQIFSMCSDLLLLRPGGKVGYFGSIADGGAEAAGFFEKQG 699
            LL  V GY  PG + A MG SGAGKTTL+DVL+ RKT G +TG + +NG P D+ +F R SGYVEQM++HV   TV+EA+E +A+LRL            +T A+R   +   +++L L +++H ++        L+ EQ+KR+TI VEL   PS+L+LDEPT+GLD  AAL++  A++ ++ +GVAV+CT+HQPSK++FS    LLLL+ GG+V YFG + +  ++   +FEK G
Sbjct:  786 LLHEVCGYALPGRLCALMGSSGAGKTTLMDVLARRKTKGTITGDVLVNGYPQDS-LFGRVSGYVEQMDIHVSKTTVREAIEFSARLRLPED---------VTKAEREDQVEKTIDLLELREIQHELVGIPGAAIGLSSEQRKRLTIAVELVVRPSILFLDEPTSGLDSRAALKVANAMRRVSDTGVAVLCTIHQPSKEVFSCFDSLLLLQRGGRVVYFGDLGEQASQMLAYFEKNG 1011          
BLAST of mRNA_M-pyrifera_M_contig83932.19591.1 vs. uniprot
Match: A0A6A5AIK5_9STRA (ABC transporter domain-containing protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A5AIK5_9STRA)

HSP 1 Score: 194 bits (493), Expect = 3.910e-55
Identity = 106/218 (48.62%), Postives = 142/218 (65.14%), Query Frame = 1
Query:    1 ELPLLDNVSGYVQPGMVVAFMGPSGAGKTTLLDVLSLRKTAGRMTGTIKINGQPMDTDMFPRYSGYVEQMNLHVETETVKEALELAAKLRLDYSSEFRAEGMKLTWAQRHAHIAWVMEVLGLWQVRHAMIQELNLEQKKRVTIGVELAANPSLLWLDEPTTGLDGLAALRIMQAVQDIAKSGVAVVCTLHQPSKQIFSMCSDLLLLRPGGKVGYFGSI 654
            E  LL  V+ + +PG + A MG SGAGKTT +DV++ RKT GR+ G I ING+  D  +F R + Y EQM++H E  T++EAL  +  LRL    E  +E  KL       H+      L L  + H +I  L++EQKKRVTIGVE+ ANPS+L+LDEPT+GLD  +A  +M+ VQ IA++G  VVCT+HQPS QIF +   LLLL+ GG+V YFG +
Sbjct:  304 ERQLLHQVTAFFEPGTMTALMGSSGAGKTTFMDVIAGRKTGGRIVGDIHINGELKDPTIFSRITAYCEQMDIHSERATIREALLFSTFLRLP---ETISEAAKLNLVNETLHL------LELHTIAHELILNLSVEQKKRVTIGVEVVANPSILFLDEPTSGLDARSAQVVMRGVQSIARTGRTVVCTIHQPSIQIFELFDALLLLQKGGRVAYFGEL 512          
BLAST of mRNA_M-pyrifera_M_contig83932.19591.1 vs. uniprot
Match: A0A8K1C2H9_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C2H9_PYTOL)

HSP 1 Score: 199 bits (505), Expect = 7.730e-55
Identity = 105/221 (47.51%), Postives = 148/221 (66.97%), Query Frame = 1
Query:    1 ELPLLDNVSGYVQPGMVVAFMGPSGAGKTTLLDVLSLRKTAGRMTGTIKINGQPMDTDMFPRYSGYVEQMNLHVETETVKEALELAAKLRLDYSSEFRAEGMKLTWAQRHAHIAWVMEVLGLWQVRHAMIQELNLEQKKRVTIGVELAANPSLLWLDEPTTGLDGLAALRIMQAVQDIAKSGVAVVCTLHQPSKQIFSMCSDLLLLRPGGKVGYFGSIADG 663
            EL LL  ++ +  PG + A MG SGAGKTTL+DVL+ RKT GR+ G I +NG+P D   F R +GY EQM++H    T++EALE +A+LRL  S+         T A+R A +   M++L L  +   +++  ++EQKKR+TIGVE+ ANPS+L+LDEPT+GLD  AA  +M+ V+ IA++G  V+CT+HQPS QIF +   LLLL+ GG   +FG +  G
Sbjct:  888 ELQLLHGITAHFTPGKMTALMGSSGAGKTTLMDVLAGRKTGGRIEGDILVNGEPKDPTTFSRIAGYCEQMDIHSGGATIQEALEFSARLRLPAST---------TPAERRAIVQNTMDLLELNGLALELVRNCSIEQKKRITIGVEVVANPSILFLDEPTSGLDARAASFVMKGVRSIARTGRTVLCTIHQPSVQIFELFDSLLLLQKGGYTAFFGDLGQG 1099          
BLAST of mRNA_M-pyrifera_M_contig83932.19591.1 vs. uniprot
Match: G0S0N2_CHATD (Putative ABC transporter PMR5 protein n=1 Tax=Chaetomium thermophilum (strain DSM 1495 / CBS 144.50 / IMI 039719) TaxID=759272 RepID=G0S0N2_CHATD)

HSP 1 Score: 198 bits (503), Expect = 1.440e-54
Identity = 108/231 (46.75%), Postives = 156/231 (67.53%), Query Frame = 1
Query:   10 LLDNVSGYVQPGMVVAFMGPSGAGKTTLLDVLSLRKTAGRMTGTIKINGQPMDTDMFPRYSGYVEQMNLHVETETVKEALELAAKLRLDYSSEFRAEGMKLTWAQRHAHIAWVMEVLGLWQVRHAMIQELNLEQKKRVTIGVELAANPSLL-WLDEPTTGLDGLAALRIMQAVQDIAKSGVAVVCTLHQPSKQIFSMCSDLLLLRPGGKVGYFGSIADGGAEAAGFFEKQG 699
            LL++VSGYV+PGM+VA MG SGAGKTTLL+ LS R+T G +TG + ++G  +  D F R +G+VEQM+LH ET TV+EA+E +A LR         +G  +    + A++  V+E+L L  ++ A+I  L +EQKKR+TIGVELAA PSLL +LDEPT+GLD  +A  I++ ++ +  +G  ++CT+HQPS  +      +L L PGGK  YFG + + GA   G+F ++G
Sbjct:  917 LLNDVSGYVKPGMMVALMGASGAGKTTLLNTLSQRQTVGVVTGEMLVDGHLLPAD-FQRSTGFVEQMDLHEETATVREAIEFSALLR---------QGRDVPREMKLAYVNKVLELLELTDIQDALISSLGVEQKKRLTIGVELAARPSLLLFLDEPTSGLDAQSAFSIVRFLRKLCAAGQVIICTIHQPSSDLIQQFDLILALNPGGKTIYFGPVGEDGAAVVGYFAQRG 1137          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig83932.19591.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S4HWT0_9EUKA3.330e-8159.31Hypothetical protein (Fragment) n=1 Tax=Vannella s... [more]
A0A084G7R5_PSEDA2.880e-5946.52Uncharacterized protein n=1 Tax=Pseudallescheria a... [more]
A0A2D4CC60_PYTIN2.330e-5848.28Pleiotropic drug resistance transporter n=1 Tax=Py... [more]
A0A1J3K5B1_NOCCA2.840e-5849.14Pleiotropic drug resistance protein 12 (Fragment) ... [more]
A0A7S0BS14_9RHOD5.870e-5746.61Probable ATP-dependent transporter ycf16 (Fragment... [more]
A0A7S3EGH3_9RHOD8.110e-5746.19Probable ATP-dependent transporter ycf16 n=1 Tax=R... [more]
A0A7S2ZVF9_9RHOD1.010e-5646.19Probable ATP-dependent transporter ycf16 n=5 Tax=R... [more]
A0A6A5AIK5_9STRA3.910e-5548.62ABC transporter domain-containing protein (Fragmen... [more]
A0A8K1C2H9_PYTOL7.730e-5547.51Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
G0S0N2_CHATD1.440e-5446.75Putative ABC transporter PMR5 protein n=1 Tax=Chae... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig83932contigM-pyrifera_M_contig83932:6..704 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score198.4
Seed ortholog evalue3.8e-48
Seed eggNOG ortholog44689.DDB0191229
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005768,GO:0005886,GO:0006810,GO:0006873,GO:0006885,GO:0006897,GO:0006950,GO:0006996,GO:0007032,GO:0007154,GO:0008150,GO:0009267,GO:0009605,GO:0009653,GO:0009987,GO:0009991,GO:0010256,GO:0012505,GO:0015399,GO:0015405,GO:0016020,GO:0016021,GO:0016043,GO:0016050,GO:0016192,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0019725,GO:0022804,GO:0022857,GO:0030003,GO:0030004,GO:0030154,GO:0030587,GO:0030641,GO:0031152,GO:0031154,GO:0031224,GO:0031288,GO:0031410,GO:0031667,GO:0031668,GO:0031669,GO:0031982,GO:0032502,GO:0033554,GO:0042592,GO:0042594,GO:0042623,GO:0042626,GO:0043226,GO:0043227,GO:0043229,GO:0043492,GO:0044424,GO:0044425,GO:0044444,GO:0044464,GO:0044764,GO:0045851,GO:0048388,GO:0048856,GO:0048869,GO:0048878,GO:0050801,GO:0050896,GO:0051179,GO:0051234,GO:0051452,GO:0051453,GO:0051703,GO:0051704,GO:0051716,GO:0055067,GO:0055080,GO:0055082,GO:0055085,GO:0065007,GO:0065008,GO:0071496,GO:0071840,GO:0071944,GO:0090702,GO:0097708,GO:0098630,GO:0098657,GO:0098743,GO:0098771,GO:0099120
EggNOG free text desc.Belongs to the ABC transporter superfamily. ABCG family. PDR (TC 3.A.1.205) subfamily
EggNOG OGs3XAI7@554915,COG1131@1,KOG0065@2759
COG Functional cat.Q
Best tax levelAmoebozoa
Best eggNOG OGNA|NA|NA
Exons1
Model size699
Cds size699
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816746.9851582-CDS-M-pyrifera_M_contig83932:5..7041622816746.9851582-CDS-M-pyrifera_M_contig83932:5..704Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig83932 6..704 -
1692278154.0242364-CDS-M-pyrifera_M_contig83932:5..7041692278154.0242364-CDS-M-pyrifera_M_contig83932:5..704Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig83932 6..704 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig83932.19591.1prot_M-pyrifera_M_contig83932.19591.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig83932 6..704 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig83932.19591.1

>prot_M-pyrifera_M_contig83932.19591.1 ID=prot_M-pyrifera_M_contig83932.19591.1|Name=mRNA_M-pyrifera_M_contig83932.19591.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=233bp
ELPLLDNVSGYVQPGMVVAFMGPSGAGKTTLLDVLSLRKTAGRMTGTIKI
NGQPMDTDMFPRYSGYVEQMNLHVETETVKEALELAAKLRLDYSSEFRAE
GMKLTWAQRHAHIAWVMEVLGLWQVRHAMIQELNLEQKKRVTIGVELAAN
PSLLWLDEPTTGLDGLAALRIMQAVQDIAKSGVAVVCTLHQPSKQIFSMC
SDLLLLRPGGKVGYFGSIADGGAEAAGFFEKQG
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mRNA from alignment at M-pyrifera_M_contig83932:6..704-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig83932.19591.1 ID=mRNA_M-pyrifera_M_contig83932.19591.1|Name=mRNA_M-pyrifera_M_contig83932.19591.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=699bp|location=Sequence derived from alignment at M-pyrifera_M_contig83932:6..704- (Macrocystis pyrifera P11B4 male)
GAGCTGCCTTTGCTCGACAACGTCTCCGGCTACGTGCAGCCTGGGATGGT GGTTGCTTTCATGGGCCCGTCTGGAGCAGGCAAGACGACACTGTTGGATG TGTTGTCGTTGCGCAAGACTGCTGGCAGGATGACAGGCACGATCAAGATC AACGGCCAGCCCATGGACACCGACATGTTCCCCCGCTACTCGGGATATGT CGAGCAGATGAACCTGCATGTGGAGACAGAGACAGTCAAGGAGGCTCTCG AGCTCGCAGCCAAGCTGCGCCTTGATTACTCCTCCGAGTTCAGGGCTGAG GGCATGAAGCTCACGTGGGCCCAGCGCCACGCCCACATTGCCTGGGTGAT GGAGGTGCTCGGCCTCTGGCAGGTTCGCCACGCCATGATCCAGGAGCTCA ACCTCGAGCAGAAGAAGCGCGTGACAATTGGAGTGGAGCTGGCTGCCAAC CCCAGCCTGCTGTGGCTCGACGAGCCCACCACTGGCCTCGACGGTCTCGC GGCCCTGCGCATCATGCAGGCCGTGCAGGACATCGCCAAGAGCGGCGTAG CCGTCGTGTGCACTCTGCATCAGCCTTCCAAGCAGATCTTCTCGATGTGC TCCGACCTGCTTCTCCTCCGACCCGGCGGCAAGGTGGGCTACTTTGGCTC CATTGCCGACGGCGGTGCTGAAGCCGCGGGCTTCTTCGAGAAGCAGGGC
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig83932:6..704-

>mRNA_M-pyrifera_M_contig83932.19591.1 ID=mRNA_M-pyrifera_M_contig83932.19591.1|Name=mRNA_M-pyrifera_M_contig83932.19591.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1398bp|location=Sequence derived from alignment at M-pyrifera_M_contig83932:6..704- (Macrocystis pyrifera P11B4 male)
GAGCTGCCTTTGCTCGACAACGTCTCCGGCTACGTGCAGCCTGGGATGGT
GGTTGCTTTCATGGGCCCGTCTGGAGCAGGCAAGACGACACTGTTGGATG
TGTTGTCGTTGCGCAAGACTGCTGGCAGGATGACAGGCACGATCAAGATC
AACGGCCAGCCCATGGACACCGACATGTTCCCCCGCTACTCGGGATATGT
CGAGCAGATGAACCTGCATGTGGAGACAGAGACAGTCAAGGAGGCTCTCG
AGCTCGCAGCCAAGCTGCGCCTTGATTACTCCTCCGAGTTCAGGGCTGAG
GGCATGAAGCTCACGTGGGCCCAGCGCCACGCCCACATTGCCTGGGTGAT
GGAGGTGCTCGGCCTCTGGCAGGTTCGCCACGCCATGATCCAGGAGCTCA
ACCTCGAGCAGAAGAAGCGCGTGACAATTGGAGTGGAGCTGGCTGCCAAC
CCCAGCCTGCTGTGGCTCGACGAGCCCACCACTGGCCTCGACGGTCTCGC
GGCCCTGCGCATCATGCAGGCCGTGCAGGACATCGCCAAGAGCGGCGTAG
CCGTCGTGTGCACTCTGCATCAGCCTTCCAAGCAGATCTTCTCGATGTGC
TCCGACCTGCTTCTCCTCCGACCCGGCGGCAAGGTGGGCTACTTTGGCTC
CATTGCCGACGGCGGTGCTGAAGCCGCGGGCTTCTTCGAGAAGCAGGGCG
AGCTGCCTTTGCTCGACAACGTCTCCGGCTACGTGCAGCCTGGGATGGTG
GTTGCTTTCATGGGCCCGTCTGGAGCAGGCAAGACGACACTGTTGGATGT
GTTGTCGTTGCGCAAGACTGCTGGCAGGATGACAGGCACGATCAAGATCA
ACGGCCAGCCCATGGACACCGACATGTTCCCCCGCTACTCGGGATATGTC
GAGCAGATGAACCTGCATGTGGAGACAGAGACAGTCAAGGAGGCTCTCGA
GCTCGCAGCCAAGCTGCGCCTTGATTACTCCTCCGAGTTCAGGGCTGAGG
GCATGAAGCTCACGTGGGCCCAGCGCCACGCCCACATTGCCTGGGTGATG
GAGGTGCTCGGCCTCTGGCAGGTTCGCCACGCCATGATCCAGGAGCTCAA
CCTCGAGCAGAAGAAGCGCGTGACAATTGGAGTGGAGCTGGCTGCCAACC
CCAGCCTGCTGTGGCTCGACGAGCCCACCACTGGCCTCGACGGTCTCGCG
GCCCTGCGCATCATGCAGGCCGTGCAGGACATCGCCAAGAGCGGCGTAGC
CGTCGTGTGCACTCTGCATCAGCCTTCCAAGCAGATCTTCTCGATGTGCT
CCGACCTGCTTCTCCTCCGACCCGGCGGCAAGGTGGGCTACTTTGGCTCC
ATTGCCGACGGCGGTGCTGAAGCCGCGGGCTTCTTCGAGAAGCAGGGC
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