mRNA_M-pyrifera_M_contig83872.19585.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig83872.19585.1
Unique NamemRNA_M-pyrifera_M_contig83872.19585.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
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BLAST of mRNA_M-pyrifera_M_contig83872.19585.1 vs. uniprot
Match: A0A2E7C4D9_9GAMM (Diaminopimelate decarboxylase n=9 Tax=Halieaceae TaxID=1706372 RepID=A0A2E7C4D9_9GAMM)

HSP 1 Score: 533 bits (1372), Expect = 1.230e-188
Identity = 265/285 (92.98%), Postives = 273/285 (95.79%), Query Frame = 1 
Query:    1 PAKTVFSGGAKTAEEVGRALEVGIHCFNVESAAELEVLNRVAAQMNVQAPVSIRVNPDVDARTHPYISTGLRENKFGLGVDEALPLYRRAVALPHIDVRGLDCHIGSQLTELSPFIDALRRLLLLVDTLAAEGIEIRHLDLGGGLGVRYRDEQPPAIGDYIAAIREELGERRLPLIFEPGRSIAAEAGLLLTRVEYLKQTPEHNFALVDAGMNDMIRPALYQAWLDIQPSHAAAEGVTATWDIVGPVCETGDFLGKQRTLCLREGSLLAMFGAGAYGFSMSSNYN 855
            PAKTVFSG AKTA E+ RALE+GIHCFNVESAAEL+VLNRVA QM  QAPVSIRVNPDVDARTHPYISTGLRENKFGLGVDEALPLYRRAVALPHIDV+GLDCHIGSQLTELSPFIDALRRLLLLVDTLA EGI IRHLDLGGGLGVRYRDEQPPAI DYIAAIR ELGERRLPL+FEPGRSIAA AG+LLTRVEYLKQTPEHNFALVDAGMNDMIRPALYQAWLDIQPSHAAA+G+ ATWDIVGPVCETGDFLGKQRTLCLREGSLLAMFGAGAYGFSMSSNYN
Sbjct:   96 PAKTVFSGVAKTAAEMARALELGIHCFNVESAAELDVLNRVAGQMGRQAPVSIRVNPDVDARTHPYISTGLRENKFGLGVDEALPLYRRAVALPHIDVQGLDCHIGSQLTELSPFIDALRRLLLLVDTLADEGIAIRHLDLGGGLGVRYRDEQPPAIADYIAAIRRELGERRLPLVFEPGRSIAANAGVLLTRVEYLKQTPEHNFALVDAGMNDMIRPALYQAWLDIQPSHAAADGINATWDIVGPVCETGDFLGKQRTLCLREGSLLAMFGAGAYGFSMSSNYN 380
[Close]
BLAST of mRNA_M-pyrifera_M_contig83872.19585.1 vs. uniprot
Match: A0A2N5Y6Y7_9GAMM (Diaminopimelate decarboxylase n=1 Tax=Kineobactrum sediminis TaxID=1905677 RepID=A0A2N5Y6Y7_9GAMM)

HSP 1 Score: 483 bits (1243), Expect = 5.210e-169
Identity = 238/285 (83.51%), Postives = 255/285 (89.47%), Query Frame = 1 
Query:    1 PAKTVFSGGAKTAEEVGRALEVGIHCFNVESAAELEVLNRVAAQMNVQAPVSIRVNPDVDARTHPYISTGLRENKFGLGVDEALPLYRRAVALPHIDVRGLDCHIGSQLTELSPFIDALRRLLLLVDTLAAEGIEIRHLDLGGGLGVRYRDEQPPAIGDYIAAIREELGERRLPLIFEPGRSIAAEAGLLLTRVEYLKQTPEHNFALVDAGMNDMIRPALYQAWLDIQPSHAAAEGVTATWDIVGPVCETGDFLGKQRTLCLREGSLLAMFGAGAYGFSMSSNYN 855
            PAK VFSG AKT  E+ RALE+GIHCFNVESAAEL+VLNRVA  MN+ APVSIRVNPDVDARTHPYISTGLRENKFGLGVDEA+ LYRRA  LPH+++RGLDCHIGSQLTELSPFIDALR LL+L+D L AEGI IRHLDLGGGLGVRYRDEQPPAI DYI AIR ELG R+LPL+FEPGRSIAA AGLLLTRVEY+KQTPEHNFALVDAGMNDMIRPALYQAWLDIQP+    EG+ A WDIVGPVCETGDFLGK R L L +G+LLAMFGAGAYGFSMSSNYN
Sbjct:   96 PAKIVFSGVAKTPAEMARALELGIHCFNVESAAELDVLNRVAGNMNLLAPVSIRVNPDVDARTHPYISTGLRENKFGLGVDEAIALYRRAAQLPHLEIRGLDCHIGSQLTELSPFIDALRHLLVLIDRLEAEGIIIRHLDLGGGLGVRYRDEQPPAIADYIGAIRAELGTRQLPLVFEPGRSIAANAGLLLTRVEYVKQTPEHNFALVDAGMNDMIRPALYQAWLDIQPTRRQEEGINAHWDIVGPVCETGDFLGKNRPLTLADGTLLAMFGAGAYGFSMSSNYN 380
[Close]
BLAST of mRNA_M-pyrifera_M_contig83872.19585.1 vs. uniprot
Match: A0A6C0U117_9GAMM (Diaminopimelate decarboxylase n=1 Tax=Kineobactrum salinum TaxID=2708301 RepID=A0A6C0U117_9GAMM)

HSP 1 Score: 482 bits (1240), Expect = 1.490e-168
Identity = 244/285 (85.61%), Postives = 254/285 (89.12%), Query Frame = 1 
Query:    1 PAKTVFSGGAKTAEEVGRALEVGIHCFNVESAAELEVLNRVAAQMNVQAPVSIRVNPDVDARTHPYISTGLRENKFGLGVDEALPLYRRAVALPHIDVRGLDCHIGSQLTELSPFIDALRRLLLLVDTLAAEGIEIRHLDLGGGLGVRYRDEQPPAIGDYIAAIREELGERRLPLIFEPGRSIAAEAGLLLTRVEYLKQTPEHNFALVDAGMNDMIRPALYQAWLDIQPSHAAAEGVTATWDIVGPVCETGDFLGKQRTLCLREGSLLAMFGAGAYGFSMSSNYN 855
            PA+TVFSG AKT  E+ RALEVGIHCFNVESAAELEVLNRVA   N  APVSIRVNPDVDARTHPYISTGLRENKFGLGV EALPLYR+A  LPHI+V GLDCHIGSQLTELSPFIDALRRLL LVD LAAEGI IRHLDLGGGLGVRYRDE PPAI DYIAAIR ELGER LPL+FEPGRSIAA AGLLLTRVEYLKQTPEH+FALVDAGMNDMIRPALYQAWLDIQP+    EG  A WDIVGPVCETGDFLGKQR L L++G LLA+FGAGAYGFSMSSNYN
Sbjct:   96 PARTVFSGVAKTPAEMARALEVGIHCFNVESAAELEVLNRVAGSRNQCAPVSIRVNPDVDARTHPYISTGLRENKFGLGVAEALPLYRQAAMLPHIEVLGLDCHIGSQLTELSPFIDALRRLLRLVDELAAEGIAIRHLDLGGGLGVRYRDETPPAIEDYIAAIRAELGERELPLVFEPGRSIAANAGLLLTRVEYLKQTPEHHFALVDAGMNDMIRPALYQAWLDIQPTRRHREGRQALWDIVGPVCETGDFLGKQRELSLQQGELLAIFGAGAYGFSMSSNYN 380
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BLAST of mRNA_M-pyrifera_M_contig83872.19585.1 vs. uniprot
Match: A0A5C9A4V6_9GAMM (Diaminopimelate decarboxylase n=1 Tax=Parahaliea maris TaxID=2716870 RepID=A0A5C9A4V6_9GAMM)

HSP 1 Score: 452 bits (1164), Expect = 5.700e-157
Identity = 224/285 (78.60%), Postives = 249/285 (87.37%), Query Frame = 1 
Query:    1 PAKTVFSGGAKTAEEVGRALEVGIHCFNVESAAELEVLNRVAAQMNVQAPVSIRVNPDVDARTHPYISTGLRENKFGLGVDEALPLYRRAVALPHIDVRGLDCHIGSQLTELSPFIDALRRLLLLVDTLAAEGIEIRHLDLGGGLGVRYRDEQPPAIGDYIAAIREELGERRLPLIFEPGRSIAAEAGLLLTRVEYLKQTPEHNFALVDAGMNDMIRPALYQAWLDIQPSHAAAEGVTATWDIVGPVCETGDFLGKQRTLCLREGSLLAMFGAGAYGFSMSSNYN 855
            PAKTVFSG  KTA E+ RALE+GIHCFN+ESAAELEVLNRVA ++++ APVS+RVNPDVDARTHPYISTGLRENKFG+ +DEAL +YRRA  LP+I+V+GLDCHIGSQLT+LSPFIDAL RLL LVD LAAEGIEIRHLDLGGGLGVRYRDE+PPAI DY+AAIR ELG+R L L+ EPGRSIAA AGLLLT VEY K TPEHNFAL+DAGMNDMIRPALYQAWLDIQP+   A     TWDIVGPVCET DFLGK R L + +G LLA+FGAGAYGF+MSSNYN
Sbjct:   96 PAKTVFSGVGKTAGEMRRALELGIHCFNLESAAELEVLNRVAGELSLVAPVSVRVNPDVDARTHPYISTGLRENKFGVTMDEALRVYRRAAELPNINVQGLDCHIGSQLTDLSPFIDALHRLLGLVDQLAAEGIEIRHLDLGGGLGVRYRDEEPPAIADYVAAIRAELGDRELTLVLEPGRSIAANAGLLLTAVEYTKPTPEHNFALIDAGMNDMIRPALYQAWLDIQPARHVAGREAKTWDIVGPVCETADFLGKGRELAITDGDLLAVFGAGAYGFTMSSNYN 380
[Close]
BLAST of mRNA_M-pyrifera_M_contig83872.19585.1 vs. uniprot
Match: A0A355SRF8_9GAMM (Diaminopimelate decarboxylase (Fragment) n=1 Tax=Halieaceae bacterium TaxID=2026743 RepID=A0A355SRF8_9GAMM)

HSP 1 Score: 446 bits (1148), Expect = 5.740e-156
Identity = 225/229 (98.25%), Postives = 227/229 (99.13%), Query Frame = 1 
Query:    1 PAKTVFSGGAKTAEEVGRALEVGIHCFNVESAAELEVLNRVAAQMNVQAPVSIRVNPDVDARTHPYISTGLRENKFGLGVDEALPLYRRAVALPHIDVRGLDCHIGSQLTELSPFIDALRRLLLLVDTLAAEGIEIRHLDLGGGLGVRYRDEQPPAIGDYIAAIREELGERRLPLIFEPGRSIAAEAGLLLTRVEYLKQTPEHNFALVDAGMNDMIRPALYQAWLDIQP 687
            PAKTVFSG AKTAEE+ RALE+GIHCFNVESAAELEVLNRVAAQMNVQAPVSIRVNPDVDARTHPYISTGLRENKFGLGVDEALPLYRRAVALPHIDVRGLDCHIGSQLTELSPFIDALRRLLLLVDTLAAEGIEIRHLDLGGGLGVRYRDEQPPAIGDYIAAIREELGERRLPLIFEPGRSIAAEAGLLLTRVEYLKQTPEHNFALVDAGMNDMIRPALYQAWLDIQP
Sbjct:   96 PAKTVFSGVAKTAEEMARALELGIHCFNVESAAELEVLNRVAAQMNVQAPVSIRVNPDVDARTHPYISTGLRENKFGLGVDEALPLYRRAVALPHIDVRGLDCHIGSQLTELSPFIDALRRLLLLVDTLAAEGIEIRHLDLGGGLGVRYRDEQPPAIGDYIAAIREELGERRLPLIFEPGRSIAAEAGLLLTRVEYLKQTPEHNFALVDAGMNDMIRPALYQAWLDIQP 324
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BLAST of mRNA_M-pyrifera_M_contig83872.19585.1 vs. uniprot
Match: UPI0019D32C4E (diaminopimelate decarboxylase n=1 Tax=Parahaliea mediterranea TaxID=651086 RepID=UPI0019D32C4E)

HSP 1 Score: 450 bits (1157), Expect = 6.610e-156
Identity = 221/285 (77.54%), Postives = 244/285 (85.61%), Query Frame = 1 
Query:    1 PAKTVFSGGAKTAEEVGRALEVGIHCFNVESAAELEVLNRVAAQMNVQAPVSIRVNPDVDARTHPYISTGLRENKFGLGVDEALPLYRRAVALPHIDVRGLDCHIGSQLTELSPFIDALRRLLLLVDTLAAEGIEIRHLDLGGGLGVRYRDEQPPAIGDYIAAIREELGERRLPLIFEPGRSIAAEAGLLLTRVEYLKQTPEHNFALVDAGMNDMIRPALYQAWLDIQPSHAAAEGVTATWDIVGPVCETGDFLGKQRTLCLREGSLLAMFGAGAYGFSMSSNYN 855
            PAKTVFSG  KTA E+ RALE GI CFN+ESAAELEVLNRVA ++  QAPVS+RVNPDVDARTHPYISTGL+ENKFG+ VDEAL +YRRA  LPHI V+GLDCHIGSQLTELSPF+DALRRLL LVD LAAEGI +RHLDLGGGLGVRYRDEQPP++ DYI AIRE+LG R L L+ EPGRSIAA AG+LLTRVEY KQTP+HNFALVDAGMND+IRPALYQAW+DI+P     +  T  WD+VGPVCET DFLGKQR L L  G LLA+FGAGAYGF MSSNYN
Sbjct:   96 PAKTVFSGVGKTAAEMARALEHGIRCFNLESAAELEVLNRVAGELGRQAPVSVRVNPDVDARTHPYISTGLKENKFGVTVDEALRVYRRAAQLPHISVQGLDCHIGSQLTELSPFVDALRRLLALVDQLAAEGIALRHLDLGGGLGVRYRDEQPPSVADYIGAIREQLGSRELELVLEPGRSIAANAGILLTRVEYTKQTPDHNFALVDAGMNDLIRPALYQAWMDIRPVVPRTDTETQAWDVVGPVCETADFLGKQRELALAAGDLLAVFGAGAYGFVMSSNYN 380
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BLAST of mRNA_M-pyrifera_M_contig83872.19585.1 vs. uniprot
Match: A0A5C8ZTB1_9GAMM (Diaminopimelate decarboxylase n=2 Tax=Parahaliea TaxID=1857932 RepID=A0A5C8ZTB1_9GAMM)

HSP 1 Score: 448 bits (1153), Expect = 2.680e-155
Identity = 221/285 (77.54%), Postives = 245/285 (85.96%), Query Frame = 1 
Query:    1 PAKTVFSGGAKTAEEVGRALEVGIHCFNVESAAELEVLNRVAAQMNVQAPVSIRVNPDVDARTHPYISTGLRENKFGLGVDEALPLYRRAVALPHIDVRGLDCHIGSQLTELSPFIDALRRLLLLVDTLAAEGIEIRHLDLGGGLGVRYRDEQPPAIGDYIAAIREELGERRLPLIFEPGRSIAAEAGLLLTRVEYLKQTPEHNFALVDAGMNDMIRPALYQAWLDIQPSHAAAEGVTATWDIVGPVCETGDFLGKQRTLCLREGSLLAMFGAGAYGFSMSSNYN 855
            PAKTVFSG  KTA E+ RALE+GIHCFN+ESAAELEVLNRVAA+  V APVS+RVNPDVDARTHPYISTGL+ENKFG+ ++EAL +YRRA  LPH+ VRGLDCHIGSQLTEL+PFIDALRRLL LVD LA+EGI I HLDLGGGLGVRYRDE+PP+I  Y+AAIR ELGER++ L+ EPGRSIAA AGLLLT VEY K TP HNFALVDAGMNDMIRPALYQAWLDIQP  A  E    TWDIVGPVCET DFLGK R L + +G +LA+FGAGAYGF+MSSNYN
Sbjct:   96 PAKTVFSGVGKTAAEMARALELGIHCFNLESAAELEVLNRVAAERGVVAPVSVRVNPDVDARTHPYISTGLKENKFGVTMEEALRVYRRAAELPHVAVRGLDCHIGSQLTELTPFIDALRRLLTLVDQLASEGISIEHLDLGGGLGVRYRDEEPPSIASYVAAIRAELGERQVQLVLEPGRSIAANAGLLLTTVEYTKPTPAHNFALVDAGMNDMIRPALYQAWLDIQPIEARTEVQPRTWDIVGPVCETADFLGKGRELAIADGDVLALFGAGAYGFTMSSNYN 380
[Close]
BLAST of mRNA_M-pyrifera_M_contig83872.19585.1 vs. uniprot
Match: A0A2D5FBV4_9GAMM (Diaminopimelate decarboxylase n=2 Tax=Haliea sp. TaxID=1932666 RepID=A0A2D5FBV4_9GAMM)

HSP 1 Score: 446 bits (1146), Expect = 2.890e-154
Identity = 220/285 (77.19%), Postives = 244/285 (85.61%), Query Frame = 1 
Query:    1 PAKTVFSGGAKTAEEVGRALEVGIHCFNVESAAELEVLNRVAAQMNVQAPVSIRVNPDVDARTHPYISTGLRENKFGLGVDEALPLYRRAVALPHIDVRGLDCHIGSQLTELSPFIDALRRLLLLVDTLAAEGIEIRHLDLGGGLGVRYRDEQPPAIGDYIAAIREELGERRLPLIFEPGRSIAAEAGLLLTRVEYLKQTPEHNFALVDAGMNDMIRPALYQAWLDIQPSHAAAEGVTATWDIVGPVCETGDFLGKQRTLCLREGSLLAMFGAGAYGFSMSSNYN 855
            PAKTVFSG AKT  E+ RALE+GI CFNVES AEL+VLNRVA +    APVS+RVNPDVDARTHPYISTGLRENKFGL +DEAL  YRRA  LP++ +RGLDCHIGSQLTE++PFIDALRRLL LVD LAAEGI I HLDLGGGLGVRYRDE PPA+ DYIAA++ ELGERRLPL FEPGRSIAA AG+LLTRVEYLKQTP+H+FALVDAGMND+IRP+LYQAW+DI+       G  A WD+VGPVCETGDFLGKQR L L  G LLA+FGAGAYGF+MSSNYN
Sbjct:   96 PAKTVFSGVAKTPGEMARALELGIRCFNVESPAELDVLNRVAGEQGCVAPVSLRVNPDVDARTHPYISTGLRENKFGLSMDEALATYRRARDLPNLAIRGLDCHIGSQLTEIAPFIDALRRLLGLVDQLAAEGIAIEHLDLGGGLGVRYRDESPPAVADYIAAVKAELGERRLPLFFEPGRSIAANAGILLTRVEYLKQTPDHHFALVDAGMNDLIRPSLYQAWMDIRKVDDKQRGERAPWDVVGPVCETGDFLGKQRDLSLEAGDLLAVFGAGAYGFTMSSNYN 380
[Close]
BLAST of mRNA_M-pyrifera_M_contig83872.19585.1 vs. uniprot
Match: A0A2E0YS70_9GAMM (Diaminopimelate decarboxylase n=1 Tax=Halioglobus sp. TaxID=2024834 RepID=A0A2E0YS70_9GAMM)

HSP 1 Score: 428 bits (1100), Expect = 3.450e-147
Identity = 211/285 (74.04%), Postives = 238/285 (83.51%), Query Frame = 1 
Query:    1 PAKTVFSGGAKTAEEVGRALEVGIHCFNVESAAELEVLNRVAAQMNVQAPVSIRVNPDVDARTHPYISTGLRENKFGLGVDEALPLYRRAVALPHIDVRGLDCHIGSQLTELSPFIDALRRLLLLVDTLAAEGIEIRHLDLGGGLGVRYRDEQPPAIGDYIAAIREELGERRLPLIFEPGRSIAAEAGLLLTRVEYLKQTPEHNFALVDAGMNDMIRPALYQAWLDIQPSHAAAEGVTATWDIVGPVCETGDFLGKQRTLCLREGSLLAMFGAGAYGFSMSSNYN 855
            PAKTVFSG  KTA E+ RAL+VGI CFN+ESAAELE L +VAA     APVS+RVNPDVDARTHPYISTGLRENKFG+ +DEAL +YRRA  L H+ V G+DCHIGSQLT+  PFIDAL+RLL L+D L A+GI +RHLDLGGGLGVRYRDE+PP++  YI A+R+ LG R+L L+ EPGRSIAA AGLL+TRVEYLK TPEH+FALVDA MNDMIRPALYQAWLDIQP  A  EG+ A WDIVGPVCET DFLG+QR L L +G LLAMFGAGAYGF MSSNYN
Sbjct:   96 PAKTVFSGVGKTAAEMARALQVGIRCFNLESAAELEALEQVAAAAGQVAPVSVRVNPDVDARTHPYISTGLRENKFGVTMDEALAMYRRAAELEHVQVVGMDCHIGSQLTDTGPFIDALQRLLGLLDELQAQGISVRHLDLGGGLGVRYRDEEPPSVAQYIGALRQALGGRKLTLMLEPGRSIAANAGLLVTRVEYLKPTPEHHFALVDAAMNDMIRPALYQAWLDIQPVRADGEGLQADWDIVGPVCETADFLGRQRPLRLAQGDLLAMFGAGAYGFVMSSNYN 380
[Close]
BLAST of mRNA_M-pyrifera_M_contig83872.19585.1 vs. uniprot
Match: A0A661GWR2_9GAMM (Diaminopimelate decarboxylase n=4 Tax=Gammaproteobacteria TaxID=1236 RepID=A0A661GWR2_9GAMM)

HSP 1 Score: 422 bits (1086), Expect = 3.640e-145
Identity = 208/285 (72.98%), Postives = 236/285 (82.81%), Query Frame = 1 
Query:    1 PAKTVFSGGAKTAEEVGRALEVGIHCFNVESAAELEVLNRVAAQMNVQAPVSIRVNPDVDARTHPYISTGLRENKFGLGVDEALPLYRRAVALPHIDVRGLDCHIGSQLTELSPFIDALRRLLLLVDTLAAEGIEIRHLDLGGGLGVRYRDEQPPAIGDYIAAIREELGERRLPLIFEPGRSIAAEAGLLLTRVEYLKQTPEHNFALVDAGMNDMIRPALYQAWLDIQPSHAAAEGVTATWDIVGPVCETGDFLGKQRTLCLREGSLLAMFGAGAYGFSMSSNYN 855
            PAK VFSG  K  EE+ RALE+GI+CFN+ESAAELEVLNRVA +M   AP+S+RVNPDVDA+THPYISTGLRENKFG+  DEAL +Y+RA  L  + + G+DCHIGSQLT++SPF+DAL+RLL LVDTL   GI IRHLDLGGGLGV YRDEQPP+I  +I  IR EL ER + L+FEPGRSIAA AGLL+T+VEYLK TPEHNFALVDA MNDMIRPALYQAWLDIQP    A G  A WD+VGPVCETGDFLGK R L L +G LLA+FGAGAYGF+MSSNYN
Sbjct:   96 PAKIVFSGVGKKPEEMARALELGIYCFNLESAAELEVLNRVAGEMGAIAPISVRVNPDVDAKTHPYISTGLRENKFGVTADEALRVYQRAARLSSVQIVGMDCHIGSQLTQISPFVDALQRLLALVDTLTELGIAIRHLDLGGGLGVCYRDEQPPSIAKFIETIRHELDERDIKLLFEPGRSIAANAGLLVTQVEYLKPTPEHNFALVDAAMNDMIRPALYQAWLDIQPVQYNAVGKAARWDVVGPVCETGDFLGKDRELTLAQGDLLAIFGAGAYGFTMSSNYN 380
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig83872.19585.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2E7C4D9_9GAMM1.230e-18892.98Diaminopimelate decarboxylase n=9 Tax=Halieaceae T... [more]
A0A2N5Y6Y7_9GAMM5.210e-16983.51Diaminopimelate decarboxylase n=1 Tax=Kineobactrum... [more]
A0A6C0U117_9GAMM1.490e-16885.61Diaminopimelate decarboxylase n=1 Tax=Kineobactrum... [more]
A0A5C9A4V6_9GAMM5.700e-15778.60Diaminopimelate decarboxylase n=1 Tax=Parahaliea m... [more]
A0A355SRF8_9GAMM5.740e-15698.25Diaminopimelate decarboxylase (Fragment) n=1 Tax=H... [more]
UPI0019D32C4E6.610e-15677.54diaminopimelate decarboxylase n=1 Tax=Parahaliea m... [more]
A0A5C8ZTB1_9GAMM2.680e-15577.54Diaminopimelate decarboxylase n=2 Tax=Parahaliea T... [more]
A0A2D5FBV4_9GAMM2.890e-15477.19Diaminopimelate decarboxylase n=2 Tax=Haliea sp. T... [more]
A0A2E0YS70_9GAMM3.450e-14774.04Diaminopimelate decarboxylase n=1 Tax=Halioglobus ... [more]
A0A661GWR2_9GAMM3.640e-14572.98Diaminopimelate decarboxylase n=4 Tax=Gammaproteob... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig83872contigM-pyrifera_M_contig83872:3..857 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score553.5
Seed ortholog evalue5.7e-155
Seed eggNOG ortholog1121937.AUHJ01000007_gene1805
Preferred namelysA
KEGG rclassRC00299
KEGG koko:K01586,ko:K05366
KEGG ReactionR00451
KEGG Pathwayko00300,ko00550,ko01100,ko01110,ko01120,ko01130,ko01230,ko01501,map00300,map00550,map01100,map01110,map01120,map01130,map01230,map01501
KEGG ModuleM00016,M00525,M00526,M00527
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0006082,GO:0006520,GO:0006553,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0008836,GO:0009058,GO:0009066,GO:0009067,GO:0009085,GO:0009089,GO:0009987,GO:0016053,GO:0016829,GO:0016830,GO:0016831,GO:0019752,GO:0043436,GO:0043648,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046451,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607
EggNOG free text desc.Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine
EggNOG OGs1MUA6@1224,1RMI2@1236,4641G@72275,COG0019@1,COG0019@2
EC2.4.1.129,3.4.16.4,4.1.1.20
COG Functional cat.E
CAZyGT51
BiGG ReactioniLJ478.TM1517
Best tax levelAlteromonadaceae
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01003,ko01011
Exons1
Model size855
Cds size855
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816746.6570318-CDS-M-pyrifera_M_contig83872:2..8571622816746.6570318-CDS-M-pyrifera_M_contig83872:2..857Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig83872 3..857 -
1692278153.7857847-CDS-M-pyrifera_M_contig83872:2..8571692278153.7857847-CDS-M-pyrifera_M_contig83872:2..857Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig83872 3..857 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig83872.19585.1prot_M-pyrifera_M_contig83872.19585.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig83872 3..857 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig83872.19585.1

>prot_M-pyrifera_M_contig83872.19585.1 ID=prot_M-pyrifera_M_contig83872.19585.1|Name=mRNA_M-pyrifera_M_contig83872.19585.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=285bp
PAKTVFSGGAKTAEEVGRALEVGIHCFNVESAAELEVLNRVAAQMNVQAP
VSIRVNPDVDARTHPYISTGLRENKFGLGVDEALPLYRRAVALPHIDVRG
LDCHIGSQLTELSPFIDALRRLLLLVDTLAAEGIEIRHLDLGGGLGVRYR
DEQPPAIGDYIAAIREELGERRLPLIFEPGRSIAAEAGLLLTRVEYLKQT
PEHNFALVDAGMNDMIRPALYQAWLDIQPSHAAAEGVTATWDIVGPVCET
GDFLGKQRTLCLREGSLLAMFGAGAYGFSMSSNYN
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mRNA from alignment at M-pyrifera_M_contig83872:3..857-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig83872.19585.1 ID=mRNA_M-pyrifera_M_contig83872.19585.1|Name=mRNA_M-pyrifera_M_contig83872.19585.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=855bp|location=Sequence derived from alignment at M-pyrifera_M_contig83872:3..857- (Macrocystis pyrifera P11B4 male)
CCGGCGAAAACCGTGTTTTCCGGCGGGGCCAAAACGGCCGAGGAGGTGGG
AAGGGCGCTGGAGGTGGGCATCCACTGTTTCAACGTGGAATCCGCGGCGG
AGCTCGAGGTGCTCAACCGTGTCGCCGCACAGATGAACGTGCAGGCGCCG
GTATCCATTCGGGTCAACCCCGACGTGGATGCGCGCACCCATCCCTACAT
TTCCACCGGGTTGCGCGAAAACAAATTCGGGCTGGGTGTCGACGAAGCAC
TGCCGCTCTATCGTCGCGCTGTGGCGCTGCCGCACATCGACGTGCGCGGC
CTGGACTGCCATATCGGCTCTCAGCTGACCGAGCTCAGCCCTTTCATTGA
TGCACTGCGGCGCCTGCTGCTACTGGTCGATACGCTCGCAGCCGAAGGTA
TCGAGATCCGCCACCTCGACCTCGGTGGCGGCCTCGGGGTGCGCTACCGC
GATGAGCAACCACCCGCTATCGGCGACTATATCGCCGCCATACGCGAAGA
GCTGGGCGAACGCCGGTTGCCGCTGATATTCGAGCCGGGGCGTTCGATTG
CCGCGGAAGCCGGCCTGCTGTTGACCCGGGTGGAGTACCTCAAGCAAACC
CCCGAACACAATTTCGCCCTGGTCGATGCGGGCATGAATGACATGATTCG
CCCGGCGCTTTACCAGGCGTGGCTGGATATCCAGCCCAGTCATGCGGCGG
CTGAAGGCGTCACTGCCACCTGGGATATTGTCGGGCCCGTGTGCGAAACC
GGGGACTTCCTCGGCAAGCAGCGCACCCTGTGCTTGCGTGAAGGCAGCCT
GTTGGCCATGTTCGGTGCGGGCGCCTATGGCTTCAGCATGAGCTCCAATT
ACAAC
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig83872:3..857-

>mRNA_M-pyrifera_M_contig83872.19585.1 ID=mRNA_M-pyrifera_M_contig83872.19585.1|Name=mRNA_M-pyrifera_M_contig83872.19585.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1710bp|location=Sequence derived from alignment at M-pyrifera_M_contig83872:3..857- (Macrocystis pyrifera P11B4 male)
CCGGCGAAAACCGTGTTTTCCGGCGGGGCCAAAACGGCCGAGGAGGTGGG
AAGGGCGCTGGAGGTGGGCATCCACTGTTTCAACGTGGAATCCGCGGCGG
AGCTCGAGGTGCTCAACCGTGTCGCCGCACAGATGAACGTGCAGGCGCCG
GTATCCATTCGGGTCAACCCCGACGTGGATGCGCGCACCCATCCCTACAT
TTCCACCGGGTTGCGCGAAAACAAATTCGGGCTGGGTGTCGACGAAGCAC
TGCCGCTCTATCGTCGCGCTGTGGCGCTGCCGCACATCGACGTGCGCGGC
CTGGACTGCCATATCGGCTCTCAGCTGACCGAGCTCAGCCCTTTCATTGA
TGCACTGCGGCGCCTGCTGCTACTGGTCGATACGCTCGCAGCCGAAGGTA
TCGAGATCCGCCACCTCGACCTCGGTGGCGGCCTCGGGGTGCGCTACCGC
GATGAGCAACCACCCGCTATCGGCGACTATATCGCCGCCATACGCGAAGA
GCTGGGCGAACGCCGGTTGCCGCTGATATTCGAGCCGGGGCGTTCGATTG
CCGCGGAAGCCGGCCTGCTGTTGACCCGGGTGGAGTACCTCAAGCAAACC
CCCGAACACAATTTCGCCCTGGTCGATGCGGGCATGAATGACATGATTCG
CCCGGCGCTTTACCAGGCGTGGCTGGATATCCAGCCCAGTCATGCGGCGG
CTGAAGGCGTCACTGCCACCTGGGATATTGTCGGGCCCGTGTGCGAAACC
GGGGACTTCCTCGGCAAGCAGCGCACCCTGTGCTTGCGTGAAGGCAGCCT
GTTGGCCATGTTCGGTGCGGGCGCCTATGGCTTCAGCATGAGCTCCAATT
ACAACCCGGCGAAAACCGTGTTTTCCGGCGGGGCCAAAACGGCCGAGGAG
GTGGGAAGGGCGCTGGAGGTGGGCATCCACTGTTTCAACGTGGAATCCGC
GGCGGAGCTCGAGGTGCTCAACCGTGTCGCCGCACAGATGAACGTGCAGG
CGCCGGTATCCATTCGGGTCAACCCCGACGTGGATGCGCGCACCCATCCC
TACATTTCCACCGGGTTGCGCGAAAACAAATTCGGGCTGGGTGTCGACGA
AGCACTGCCGCTCTATCGTCGCGCTGTGGCGCTGCCGCACATCGACGTGC
GCGGCCTGGACTGCCATATCGGCTCTCAGCTGACCGAGCTCAGCCCTTTC
ATTGATGCACTGCGGCGCCTGCTGCTACTGGTCGATACGCTCGCAGCCGA
AGGTATCGAGATCCGCCACCTCGACCTCGGTGGCGGCCTCGGGGTGCGCT
ACCGCGATGAGCAACCACCCGCTATCGGCGACTATATCGCCGCCATACGC
GAAGAGCTGGGCGAACGCCGGTTGCCGCTGATATTCGAGCCGGGGCGTTC
GATTGCCGCGGAAGCCGGCCTGCTGTTGACCCGGGTGGAGTACCTCAAGC
AAACCCCCGAACACAATTTCGCCCTGGTCGATGCGGGCATGAATGACATG
ATTCGCCCGGCGCTTTACCAGGCGTGGCTGGATATCCAGCCCAGTCATGC
GGCGGCTGAAGGCGTCACTGCCACCTGGGATATTGTCGGGCCCGTGTGCG
AAACCGGGGACTTCCTCGGCAAGCAGCGCACCCTGTGCTTGCGTGAAGGC
AGCCTGTTGGCCATGTTCGGTGCGGGCGCCTATGGCTTCAGCATGAGCTC
CAATTACAAC
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