mRNA_M-pyrifera_M_contig83869.19582.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig83869.19582.1
Unique NamemRNA_M-pyrifera_M_contig83869.19582.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
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BLAST of mRNA_M-pyrifera_M_contig83869.19582.1 vs. uniprot
Match: A0A3D5D9Q7_9GAMM (tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A3D5D9Q7_9GAMM)

HSP 1 Score: 470 bits (1209), Expect = 1.380e-160
Identity = 231/295 (78.31%), Postives = 255/295 (86.44%), Query Frame = 1 
Query:    1 SLPFDVQYELVRTIRGFENAHITRPGYAIEYDYFDPRDLNPWLETRQVRGLYFAGQINGTTGYEEAAAQGLLAGVNAALRIRDQAPWYPRRDEAYLGVLVDDLVTRGTSEPYRMFTSRAEYRLLLREDNADLRLTPIGRELGLVDDRRWQAFSTKREALEREQQRLAANWMTPQRVPEEIATRVLGKPLRKEQSLADLLRRPEVDYAALMQLPGAGPGVGDPEVIEQIEIAARYSGYLERQRDEIEKHERYENAPIPADLDYADVHGLSNEIRQKLADHRPATLGQAARIAGVTP 885
            SLPFDVQY+LVR+IRGFE AHITRPGYAIEYDYFDPRD+ PWLET+Q+ GL+FAGQINGTTGYEEAAAQGLLAG+NAALR RD  PWYPRRDEAYLGVLVDDLVTRGT+EPYRMFTSRAEYRLLLREDNADLRLT IGR LGLVDDRRWQ F TKRE LE E+ RL A W++P +V +  A  V GKPLRKEQSLADLLRRPEVDYA LM LPGAGPG+   +VIEQ+EI ARYSGYLERQ +EIEKH R EN  +P  +DY DV GLS+EI+QKL  HRP T+GQA+RI+GVTP
Sbjct:  315 SLPFDVQYDLVRSIRGFEKAHITRPGYAIEYDYFDPRDIYPWLETKQISGLFFAGQINGTTGYEEAAAQGLLAGLNAALRARDSDPWYPRRDEAYLGVLVDDLVTRGTTEPYRMFTSRAEYRLLLREDNADLRLTAIGRTLGLVDDRRWQTFETKRELLEAERSRLRATWISPAKVADVDACAVFGKPLRKEQSLADLLRRPEVDYAGLMVLPGAGPGIDAADVIEQLEIEARYSGYLERQENEIEKHTRNENTLLPTHIDYFDVRGLSHEIQQKLMQHRPTTIGQASRISGVTP 609
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BLAST of mRNA_M-pyrifera_M_contig83869.19582.1 vs. uniprot
Match: A0A523PF38_9PROT (tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG n=2 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A523PF38_9PROT)

HSP 1 Score: 468 bits (1204), Expect = 7.870e-160
Identity = 229/295 (77.63%), Postives = 257/295 (87.12%), Query Frame = 1 
Query:    1 SLPFDVQYELVRTIRGFENAHITRPGYAIEYDYFDPRDLNPWLETRQVRGLYFAGQINGTTGYEEAAAQGLLAGVNAALRIRDQAPWYPRRDEAYLGVLVDDLVTRGTSEPYRMFTSRAEYRLLLREDNADLRLTPIGRELGLVDDRRWQAFSTKREALEREQQRLAANWMTPQRVPEEIATRVLGKPLRKEQSLADLLRRPEVDYAALMQLPGAGPGVGDPEVIEQIEIAARYSGYLERQRDEIEKHERYENAPIPADLDYADVHGLSNEIRQKLADHRPATLGQAARIAGVTP 885
            SLPFDVQY LVR+IRGFE AHITRPGYAIEYDYFDPR+LNPWLET++V GLYFAGQINGTTGYEEAAAQGLLAG+NAALR+RD  PWYPRRDEAY+GVLVDDLVTRGT+EPYRMFTSRAEYRLLLREDNAD RLT  GRELGLV D+RW++F  KRE  + EQ RLA+ W+TP  V E+ A   LG+PLRKEQSLADLLRRP+VDYAA+M LPGAGPG+  PEVIEQ+EI A YSGYL+RQRDEI++H R EN  IP  +DYA V GLSNEI+QKLA +RP T+GQA+RIAGVTP
Sbjct:  315 SLPFDVQYALVRSIRGFEKAHITRPGYAIEYDYFDPRELNPWLETKEVSGLYFAGQINGTTGYEEAAAQGLLAGLNAALRVRDADPWYPRRDEAYIGVLVDDLVTRGTTEPYRMFTSRAEYRLLLREDNADFRLTAKGRELGLVGDKRWRSFVAKRELFQAEQTRLASTWVTPSGVGEDAARAALGQPLRKEQSLADLLRRPDVDYAAIMTLPGAGPGITAPEVIEQLEINACYSGYLDRQRDEIDRHRRNENTSIPLSIDYAQVRGLSNEIQQKLAAYRPRTIGQASRIAGVTP 609
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BLAST of mRNA_M-pyrifera_M_contig83869.19582.1 vs. uniprot
Match: MNMG_THISH (tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG n=2 Tax=Thioalkalivibrio TaxID=106633 RepID=MNMG_THISH)

HSP 1 Score: 442 bits (1138), Expect = 9.860e-150
Identity = 217/295 (73.56%), Postives = 251/295 (85.08%), Query Frame = 1 
Query:    1 SLPFDVQYELVRTIRGFENAHITRPGYAIEYDYFDPRDLNPWLETRQVRGLYFAGQINGTTGYEEAAAQGLLAGVNAALRIRDQAPWYPRRDEAYLGVLVDDLVTRGTSEPYRMFTSRAEYRLLLREDNADLRLTPIGRELGLVDDRRWQAFSTKREALEREQQRLAANWMTPQRVPEEIATRVLGKPLRKEQSLADLLRRPEVDYAALMQLPGAGPGVGDPEVIEQIEIAARYSGYLERQRDEIEKHERYENAPIPADLDYADVHGLSNEIRQKLADHRPATLGQAARIAGVTP 885
            SLPFDVQ+ELVR+I GFE AHITRPGYAIEYDYFDPRDL P LETR + GL+FAGQINGTTGYEEAAAQGL+AG+NAA  +RD APW PRRDEAY+GVL+DDL+TRGT+EPYRMFTSRAEYRL+LREDNADLRLTP+GR++GLVDD RW AF TKREA+ERE QRLAA  + P+RV  E A RV+G    +EQ+L DLLRRPEVDYAALM L GAGPGV DP V EQ+EI A+Y+GY++RQ+DE+ + +R+EN  +P  LDYA + GLS E+RQKLA HRP TLGQAARI GVTP
Sbjct:  315 SLPFDVQFELVRSIPGFEQAHITRPGYAIEYDYFDPRDLKPSLETRCLAGLFFAGQINGTTGYEEAAAQGLVAGLNAARSVRDLAPWCPRRDEAYIGVLIDDLITRGTAEPYRMFTSRAEYRLMLREDNADLRLTPLGRDMGLVDDARWAAFCTKREAVERETQRLAATRLDPERVDREAAERVIGGAFSREQNLLDLLRRPEVDYAALMGLEGAGPGVEDPRVAEQVEIGAKYAGYIQRQQDEVARQQRHENLALPEGLDYAAITGLSMEVRQKLAAHRPHTLGQAARIPGVTP 609
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BLAST of mRNA_M-pyrifera_M_contig83869.19582.1 vs. uniprot
Match: MNMG_ALKEH (tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG n=2 Tax=Ectothiorhodospiraceae TaxID=72276 RepID=MNMG_ALKEH)

HSP 1 Score: 431 bits (1107), Expect = 3.490e-145
Identity = 214/295 (72.54%), Postives = 248/295 (84.07%), Query Frame = 1 
Query:    1 SLPFDVQYELVRTIRGFENAHITRPGYAIEYDYFDPRDLNPWLETRQVRGLYFAGQINGTTGYEEAAAQGLLAGVNAALRIRDQAPWYPRRDEAYLGVLVDDLVTRGTSEPYRMFTSRAEYRLLLREDNADLRLTPIGRELGLVDDRRWQAFSTKREALEREQQRLAANWMTPQRVPEEIATRVLGKPLRKEQSLADLLRRPEVDYAALMQLPGAGPGVGDPEVIEQIEIAARYSGYLERQRDEIEKHERYENAPIPADLDYADVHGLSNEIRQKLADHRPATLGQAARIAGVTP 885
            SLPFDVQYELVR+I G E A I RPGYAIEYD+FDPR L+P LETR + GL+FAGQINGTTGYEEAAAQGLLAG+NAALR++ + PWYPRRD+AYLGVLVDDL+TRGT EPYRMFTSRAEYRL+LREDNADLRLTPIGR+LGLVDD RW+ F+ KREALEREQ RLAA  + P  +P+ +A +VLG PLRKEQ L +LLRRP+V YA LM+LPGAG  V D EV+EQ+EI ARY+GYLERQ DE+ +  R+E  P+P  L Y  V GLS+E+R+KLA HRPAT+GQAARI GVTP
Sbjct:  315 SLPFDVQYELVRSIPGLEQARIVRPGYAIEYDFFDPRGLHPTLETRHLEGLWFAGQINGTTGYEEAAAQGLLAGLNAALRVQGREPWYPRRDQAYLGVLVDDLITRGTREPYRMFTSRAEYRLMLREDNADLRLTPIGRDLGLVDDERWRRFNAKREALEREQARLAATLIRPGDLPDALARQVLGGPLRKEQRLEELLRRPDVGYADLMRLPGAGDPVPDAEVVEQLEIQARYAGYLERQHDEVARARRHEQLPLPEGLAYDRVAGLSSEVREKLAAHRPATVGQAARIPGVTP 609
[Close]
BLAST of mRNA_M-pyrifera_M_contig83869.19582.1 vs. uniprot
Match: A0A3A4W7I4_9GAMM (tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A3A4W7I4_9GAMM)

HSP 1 Score: 430 bits (1105), Expect = 6.010e-145
Identity = 208/295 (70.51%), Postives = 248/295 (84.07%), Query Frame = 1 
Query:    1 SLPFDVQYELVRTIRGFENAHITRPGYAIEYDYFDPRDLNPWLETRQVRGLYFAGQINGTTGYEEAAAQGLLAGVNAALRIRDQAPWYPRRDEAYLGVLVDDLVTRGTSEPYRMFTSRAEYRLLLREDNADLRLTPIGRELGLVDDRRWQAFSTKREALEREQQRLAANWMTPQRVPEEIATRVLGKPLRKEQSLADLLRRPEVDYAALMQLPGAGPGVGDPEVIEQIEIAARYSGYLERQRDEIEKHERYENAPIPADLDYADVHGLSNEIRQKLADHRPATLGQAARIAGVTP 885
            SLPFDVQ ELVR+I+GFENAH+TRPGYAIEYDYFDPRDL P LET+ +  L+FAGQINGTTGYEEAAAQG++AG+NAA R RDQAPW+PRRDEAY+GVL+DDL+TRGTSEPYRMFTSRAEYRLLLREDNADLRLTP GRELG+VDD RW+ F T+REA+E+EQ+RL A  + P ++P+E A RVLG+ L +E +L DLLRRP+V Y ALM LPGAG  V D +V EQ+EI A+Y GY+ERQ+DEIE++ R+E   +P D DY +V GLS E + KL  H+PATLGQA RI+GVTP
Sbjct:  315 SLPFDVQIELVRSIKGFENAHLTRPGYAIEYDYFDPRDLQPSLETKVISNLFFAGQINGTTGYEEAAAQGIVAGINAARRARDQAPWHPRRDEAYIGVLIDDLITRGTSEPYRMFTSRAEYRLLLREDNADLRLTPRGRELGVVDDARWRIFETRREAVEKEQRRLRATRLHPDKLPQEDAGRVLGQALTREYTLMDLLRRPDVTYGALMTLPGAGDAVADEKVAEQVEIQAKYHGYIERQQDEIERNRRHEETSLPLDFDYGNVRGLSKEAQLKLNAHKPATLGQAGRISGVTP 609
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BLAST of mRNA_M-pyrifera_M_contig83869.19582.1 vs. uniprot
Match: A0A3D0ST27_9GAMM (tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A3D0ST27_9GAMM)

HSP 1 Score: 428 bits (1101), Expect = 2.900e-144
Identity = 207/295 (70.17%), Postives = 245/295 (83.05%), Query Frame = 1 
Query:    1 SLPFDVQYELVRTIRGFENAHITRPGYAIEYDYFDPRDLNPWLETRQVRGLYFAGQINGTTGYEEAAAQGLLAGVNAALRIRDQAPWYPRRDEAYLGVLVDDLVTRGTSEPYRMFTSRAEYRLLLREDNADLRLTPIGRELGLVDDRRWQAFSTKREALEREQQRLAANWMTPQRVPEEIATRVLGKPLRKEQSLADLLRRPEVDYAALMQLPGAGPGVGDPEVIEQIEIAARYSGYLERQRDEIEKHERYENAPIPADLDYADVHGLSNEIRQKLADHRPATLGQAARIAGVTP 885
            SLPFD+QY+LVR+++G ENAHITRPGYAIEYD+FDPRDL+  L+TR V+GL+FAGQINGTTGYEEAAAQGLLAG+NA   +R +APW+P RDEAYLGVL+DDLVTRG +EPYRMFTSRAE+RLLLREDNADLRLT IGR LGLVDD RWQAF TKREA+E+E QRL A W+ P ++ E    +VL  PL +E   A+LLRRPEV YA LM+LPG GP V DP+V EQ+EI A+Y+GY+ERQR+EIE+  R+E   +PADLDY  VHGLS E+R+KL  HRP TLGQA R+ GVTP
Sbjct:  315 SLPFDIQYQLVRSMKGLENAHITRPGYAIEYDFFDPRDLDYSLQTRSVQGLFFAGQINGTTGYEEAAAQGLLAGINAGRYVRAEAPWWPNRDEAYLGVLIDDLVTRGATEPYRMFTSRAEHRLLLREDNADLRLTEIGRRLGLVDDERWQAFETKREAIEQENQRLRALWVRPGQLTENDIQQVLQGPLARESRAAELLRRPEVSYAGLMRLPGIGPSVADPQVAEQVEIQAKYAGYIERQREEIERQRRHEELVLPADLDYTAVHGLSREVREKLDRHRPQTLGQAGRVPGVTP 609
[Close]
BLAST of mRNA_M-pyrifera_M_contig83869.19582.1 vs. uniprot
Match: A0A450V8M1_9GAMM (tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG n=1 Tax=Candidatus Kentron sp. H TaxID=2126337 RepID=A0A450V8M1_9GAMM)

HSP 1 Score: 427 bits (1097), Expect = 8.600e-144
Identity = 211/295 (71.53%), Postives = 240/295 (81.36%), Query Frame = 1 
Query:    1 SLPFDVQYELVRTIRGFENAHITRPGYAIEYDYFDPRDLNPWLETRQVRGLYFAGQINGTTGYEEAAAQGLLAGVNAALRIRDQAPWYPRRDEAYLGVLVDDLVTRGTSEPYRMFTSRAEYRLLLREDNADLRLTPIGRELGLVDDRRWQAFSTKREALEREQQRLAANWMTPQRVPEEIATRVLGKPLRKEQSLADLLRRPEVDYAALMQLPGAGPGVGDPEVIEQIEIAARYSGYLERQRDEIEKHERYENAPIPADLDYADVHGLSNEIRQKLADHRPATLGQAARIAGVTP 885
            SLPFD QY  VR IRG ENAHITRPGYAIEYD+FDPRDL P LETR + GL+FAGQINGTTGYEEAAAQGLLAG+NA    RD+ PW+PRRDEAYLGV+VDDL+T+G +EPYRMFTSRAEYRLLLREDNAD RLT  GR LGLVDD RW+AF  KREA+ERE+ RL A W+TP R+P E ATRVLG+P+ +E +L DLLRRPEV Y ALM LPG G GV DP V+EQ+EIAA+Y GY++RQ DEI +   +E   IP DLDY  V GLS E+RQ+LA+ RPATLGQA RI GVTP
Sbjct:  315 SLPFDTQYAYVRAIRGLENAHITRPGYAIEYDFFDPRDLKPGLETRAIAGLFFAGQINGTTGYEEAAAQGLLAGLNAVRYARDEDPWWPRRDEAYLGVMVDDLITKGLTEPYRMFTSRAEYRLLLREDNADRRLTETGRRLGLVDDGRWRAFQEKREAIEREEARLRATWVTPARLPPEEATRVLGQPIGREYNLFDLLRRPEVGYRALMSLPGVGEGVHDPVVMEQLEIAAKYQGYIQRQTDEIARMALFEERAIPPDLDYEAVPGLSTEVRQRLAETRPATLGQAGRIPGVTP 609
[Close]
BLAST of mRNA_M-pyrifera_M_contig83869.19582.1 vs. uniprot
Match: A0A6N1DND8_9GAMM (tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG n=1 Tax=Ectothiorhodospiraceae bacterium 2226 TaxID=2740164 RepID=A0A6N1DND8_9GAMM)

HSP 1 Score: 426 bits (1096), Expect = 2.750e-143
Identity = 212/295 (71.86%), Postives = 241/295 (81.69%), Query Frame = 1 
Query:    1 SLPFDVQYELVRTIRGFENAHITRPGYAIEYDYFDPRDLNPWLETRQVRGLYFAGQINGTTGYEEAAAQGLLAGVNAALRIRDQAPWYPRRDEAYLGVLVDDLVTRGTSEPYRMFTSRAEYRLLLREDNADLRLTPIGRELGLVDDRRWQAFSTKREALEREQQRLAANWMTPQRVPEEIATRVLGKPLRKEQSLADLLRRPEVDYAALMQLPGAGPGVGDPEVIEQIEIAARYSGYLERQRDEIEKHERYENAPIPADLDYADVHGLSNEIRQKLADHRPATLGQAARIAGVTP 885
            SLPFDVQ+ LVR+I GFE AHITRPGYAIEYDYFDPRDL P LETR + GL+FAGQINGTTGYEEAAAQGLLAG+NAA    D+APW+PRRD+AY+GVLVDDL+TRGTSEPYRMFTSRAEYRLLLREDNADLRLT IGRELGLVDD RW AF  KR+A+EREQ RL   W+ P     + A R+LG PL +EQ  A+LLRRP V YA L  LPG GP V DP+V EQIEI A+Y+GY+ERQ DEI +  R+++  +PADLDYA V GLS E+R+KLA  RPATLGQAAR+ GVTP
Sbjct:  333 SLPFDVQHALVRSIPGFERAHITRPGYAIEYDYFDPRDLQPTLETRALAGLFFAGQINGTTGYEEAAAQGLLAGLNAARVAADEAPWWPRRDQAYIGVLVDDLITRGTSEPYRMFTSRAEYRLLLREDNADLRLTAIGRELGLVDDARWSAFCAKRDAIEREQARLHDIWLRPSDAAADQAARLLGAPLAREQRAAELLRRPNVRYAELTALPGVGPAVTDPQVAEQIEIQAKYAGYIERQHDEIARQRRHDDLALPADLDYAAVRGLSAEVREKLAHQRPATLGQAARVPGVTP 627
[Close]
BLAST of mRNA_M-pyrifera_M_contig83869.19582.1 vs. uniprot
Match: A0A450YNG7_9GAMM (tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG n=2 Tax=Candidatus Kentron sp. SD TaxID=2126332 RepID=A0A450YNG7_9GAMM)

HSP 1 Score: 425 bits (1093), Expect = 1.080e-142
Identity = 211/295 (71.53%), Postives = 243/295 (82.37%), Query Frame = 1 
Query:    1 SLPFDVQYELVRTIRGFENAHITRPGYAIEYDYFDPRDLNPWLETRQVRGLYFAGQINGTTGYEEAAAQGLLAGVNAALRIRDQAPWYPRRDEAYLGVLVDDLVTRGTSEPYRMFTSRAEYRLLLREDNADLRLTPIGRELGLVDDRRWQAFSTKREALEREQQRLAANWMTPQRVPEEIATRVLGKPLRKEQSLADLLRRPEVDYAALMQLPGAGPGVGDPEVIEQIEIAARYSGYLERQRDEIEKHERYENAPIPADLDYADVHGLSNEIRQKLADHRPATLGQAARIAGVTP 885
            SLPFD QY LVR+IRGFENAHITRPGYAIEYD+FDPRDL P LET+ + GL+FAGQINGTTGYEEAAAQGLLAG+NAA     Q PW+PRRDEAYLGVL+DDL+T+GT+EPYRMFTSRAEYRLLLREDNADLRLT   R LGLVDDRRW+AF  KREA+ERE+QRL    +TP R+P E A RVLG+P+ +E +L DLLRRPEV Y  LM LP  GPGV D EVI+Q+E+ A+Y GY+ERQ DEI +  +YE   IP+ LDYA V GLS E+RQ+LA+ RPATLGQAAR+ GVTP
Sbjct:  315 SLPFDTQYALVRSIRGFENAHITRPGYAIEYDFFDPRDLKPSLETKAIPGLFFAGQINGTTGYEEAAAQGLLAGLNAARHAGGQEPWWPRRDEAYLGVLIDDLITKGTTEPYRMFTSRAEYRLLLREDNADLRLTAQARALGLVDDRRWRAFQEKREAIEREEQRLRNTRITPTRLPPEEAKRVLGQPITREYTLFDLLRRPEVGYRELMSLPEVGPGVRDGEVIQQLEVVAKYQGYIERQTDEITRMRQYEEHAIPSHLDYAKVPGLSTEVRQRLAEVRPATLGQAARVPGVTP 609
[Close]
BLAST of mRNA_M-pyrifera_M_contig83869.19582.1 vs. uniprot
Match: A0A3M1DHZ3_9GAMM (tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A3M1DHZ3_9GAMM)

HSP 1 Score: 423 bits (1087), Expect = 3.340e-142
Identity = 209/295 (70.85%), Postives = 242/295 (82.03%), Query Frame = 1 
Query:    1 SLPFDVQYELVRTIRGFENAHITRPGYAIEYDYFDPRDLNPWLETRQVRGLYFAGQINGTTGYEEAAAQGLLAGVNAALRIRDQAPWYPRRDEAYLGVLVDDLVTRGTSEPYRMFTSRAEYRLLLREDNADLRLTPIGRELGLVDDRRWQAFSTKREALEREQQRLAANWMTPQRVPEEIATRVLGKPLRKEQSLADLLRRPEVDYAALMQLPGAGPGVGDPEVIEQIEIAARYSGYLERQRDEIEKHERYENAPIPADLDYADVHGLSNEIRQKLADHRPATLGQAARIAGVTP 885
            SLPF+VQ ELVRT+ GF  AH+TRPGYAIEYD+FDPR LN  LETR + GL+FAGQINGTTGYEEAAAQGLLAGVNA L +R +APW PRRDEAYLGVLVDDLVTRGT EPYRMFTSRAEYRL LREDNADLRLTP  RELGL+D+ RW+AF  KREA+ RE +RL   W+ P  +PE +   VLG PL +EQ L++LL RP V Y ALM+LPGAGPGV DPEV EQ+ I ARY+GY+ERQR EIE++ R+E  P+P DLDY  V GLS E+ QKL+++RPATLGQAARI+G+TP
Sbjct:  315 SLPFEVQVELVRTLPGFGRAHLTRPGYAIEYDFFDPRGLNATLETRPLAGLFFAGQINGTTGYEEAAAQGLLAGVNAVLAVRGEAPWTPRRDEAYLGVLVDDLVTRGTREPYRMFTSRAEYRLQLREDNADLRLTPKARELGLIDEARWEAFERKREAIAREGERLRDTWVRPADLPEAVQLEVLGGPLAREQRLSELLARPGVAYEALMRLPGAGPGVTDPEVAEQVAIQARYAGYIERQRAEIERNRRHEETPLPPDLDYRRVRGLSAEVVQKLSEYRPATLGQAARISGITP 609
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig83869.19582.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A3D5D9Q7_9GAMM1.380e-16078.31tRNA uridine 5-carboxymethylaminomethyl modificati... [more]
A0A523PF38_9PROT7.870e-16077.63tRNA uridine 5-carboxymethylaminomethyl modificati... [more]
MNMG_THISH9.860e-15073.56tRNA uridine 5-carboxymethylaminomethyl modificati... [more]
MNMG_ALKEH3.490e-14572.54tRNA uridine 5-carboxymethylaminomethyl modificati... [more]
A0A3A4W7I4_9GAMM6.010e-14570.51tRNA uridine 5-carboxymethylaminomethyl modificati... [more]
A0A3D0ST27_9GAMM2.900e-14470.17tRNA uridine 5-carboxymethylaminomethyl modificati... [more]
A0A450V8M1_9GAMM8.600e-14471.53tRNA uridine 5-carboxymethylaminomethyl modificati... [more]
A0A6N1DND8_9GAMM2.750e-14371.86tRNA uridine 5-carboxymethylaminomethyl modificati... [more]
A0A450YNG7_9GAMM1.080e-14271.53tRNA uridine 5-carboxymethylaminomethyl modificati... [more]
A0A3M1DHZ3_9GAMM3.340e-14270.85tRNA uridine 5-carboxymethylaminomethyl modificati... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig83869contigM-pyrifera_M_contig83869:2..886 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score443.4
Seed ortholog evalue8.6e-122
Seed eggNOG ortholog396588.Tgr7_3316
Preferred namegidA
KEGG rclassRC00053,RC00209,RC00870
KEGG koko:K03495
KEGG ReactionR08701
Hectar predicted targeting categoryother localisation
GOsGO:0000166,GO:0001510,GO:0002097,GO:0002098,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009314,GO:0009411,GO:0009416,GO:0009451,GO:0009628,GO:0009987,GO:0010467,GO:0016070,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0036094,GO:0043167,GO:0043168,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0048037,GO:0050660,GO:0050662,GO:0050896,GO:0071704,GO:0090304,GO:0097159,GO:1901265,GO:1901360,GO:1901363
EggNOG free text desc.NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34
EggNOG OGs1MU6F@1224,1RMM1@1236,1WXBH@135613,COG0445@1,COG0445@2
COG Functional cat.D
Best tax levelChromatiales
Best eggNOG OGNA|NA|NA
BRITEko00000,ko03016,ko03036
Exons1
Model size885
Cds size885
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816746.5493495-CDS-M-pyrifera_M_contig83869:1..8861622816746.5493495-CDS-M-pyrifera_M_contig83869:1..886Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig83869 2..886 +
1692278153.731655-CDS-M-pyrifera_M_contig83869:1..8861692278153.731655-CDS-M-pyrifera_M_contig83869:1..886Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig83869 2..886 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig83869.19582.1prot_M-pyrifera_M_contig83869.19582.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig83869 2..886 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig83869.19582.1

>prot_M-pyrifera_M_contig83869.19582.1 ID=prot_M-pyrifera_M_contig83869.19582.1|Name=mRNA_M-pyrifera_M_contig83869.19582.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=295bp
SLPFDVQYELVRTIRGFENAHITRPGYAIEYDYFDPRDLNPWLETRQVRG
LYFAGQINGTTGYEEAAAQGLLAGVNAALRIRDQAPWYPRRDEAYLGVLV
DDLVTRGTSEPYRMFTSRAEYRLLLREDNADLRLTPIGRELGLVDDRRWQ
AFSTKREALEREQQRLAANWMTPQRVPEEIATRVLGKPLRKEQSLADLLR
RPEVDYAALMQLPGAGPGVGDPEVIEQIEIAARYSGYLERQRDEIEKHER
YENAPIPADLDYADVHGLSNEIRQKLADHRPATLGQAARIAGVTP
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mRNA from alignment at M-pyrifera_M_contig83869:2..886+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig83869.19582.1 ID=mRNA_M-pyrifera_M_contig83869.19582.1|Name=mRNA_M-pyrifera_M_contig83869.19582.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=885bp|location=Sequence derived from alignment at M-pyrifera_M_contig83869:2..886+ (Macrocystis pyrifera P11B4 male)
AGTCTGCCGTTCGACGTACAGTACGAGCTTGTGCGCACGATCCGCGGGTT
TGAAAATGCGCACATTACCCGACCCGGATACGCGATCGAATACGATTATT
TCGATCCGCGCGACCTGAATCCCTGGCTCGAGACGCGGCAGGTTCGCGGG
CTGTATTTCGCCGGACAGATCAACGGCACAACGGGTTATGAGGAAGCCGC
GGCCCAGGGCCTGCTCGCCGGGGTCAACGCGGCGCTGCGGATCCGGGATC
AGGCGCCGTGGTACCCGCGACGCGACGAAGCCTACCTCGGTGTGCTCGTC
GACGATCTCGTTACGCGCGGAACGAGCGAACCCTACCGGATGTTCACGAG
CCGCGCGGAATACCGGCTGTTGCTGCGCGAGGACAACGCGGATCTGCGCC
TGACCCCGATCGGCAGAGAGCTCGGGCTCGTAGACGATCGCCGCTGGCAG
GCATTCTCGACGAAGCGGGAAGCGCTGGAACGCGAACAACAGCGGCTTGC
CGCGAACTGGATGACCCCGCAACGGGTACCCGAGGAGATCGCCACACGGG
TCCTCGGCAAGCCCCTGCGCAAGGAGCAGAGCCTCGCGGATCTGCTGCGG
CGTCCCGAGGTGGATTACGCGGCGCTGATGCAGCTGCCGGGCGCAGGGCC
GGGCGTGGGTGACCCGGAGGTCATCGAACAAATTGAAATCGCCGCGCGCT
ACAGCGGTTATCTCGAACGTCAGCGGGATGAAATCGAAAAGCACGAGCGG
TACGAGAATGCCCCGATCCCGGCCGACCTCGACTATGCCGACGTCCACGG
ACTGTCGAACGAGATCCGCCAGAAGCTCGCGGACCACCGGCCGGCGACGC
TCGGGCAGGCCGCACGGATTGCCGGGGTGACGCCG
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig83869:2..886+

>mRNA_M-pyrifera_M_contig83869.19582.1 ID=mRNA_M-pyrifera_M_contig83869.19582.1|Name=mRNA_M-pyrifera_M_contig83869.19582.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1770bp|location=Sequence derived from alignment at M-pyrifera_M_contig83869:2..886+ (Macrocystis pyrifera P11B4 male)
AGTCTGCCGTTCGACGTACAGTACGAGCTTGTGCGCACGATCCGCGGGTT
TGAAAATGCGCACATTACCCGACCCGGATACGCGATCGAATACGATTATT
TCGATCCGCGCGACCTGAATCCCTGGCTCGAGACGCGGCAGGTTCGCGGG
CTGTATTTCGCCGGACAGATCAACGGCACAACGGGTTATGAGGAAGCCGC
GGCCCAGGGCCTGCTCGCCGGGGTCAACGCGGCGCTGCGGATCCGGGATC
AGGCGCCGTGGTACCCGCGACGCGACGAAGCCTACCTCGGTGTGCTCGTC
GACGATCTCGTTACGCGCGGAACGAGCGAACCCTACCGGATGTTCACGAG
CCGCGCGGAATACCGGCTGTTGCTGCGCGAGGACAACGCGGATCTGCGCC
TGACCCCGATCGGCAGAGAGCTCGGGCTCGTAGACGATCGCCGCTGGCAG
GCATTCTCGACGAAGCGGGAAGCGCTGGAACGCGAACAACAGCGGCTTGC
CGCGAACTGGATGACCCCGCAACGGGTACCCGAGGAGATCGCCACACGGG
TCCTCGGCAAGCCCCTGCGCAAGGAGCAGAGCCTCGCGGATCTGCTGCGG
CGTCCCGAGGTGGATTACGCGGCGCTGATGCAGCTGCCGGGCGCAGGGCC
GGGCGTGGGTGACCCGGAGGTCATCGAACAAATTGAAATCGCCGCGCGCT
ACAGCGGTTATCTCGAACGTCAGCGGGATGAAATCGAAAAGCACGAGCGG
TACGAGAATGCCCCGATCCCGGCCGACCTCGACTATGCCGACGTCCACGG
ACTGTCGAACGAGATCCGCCAGAAGCTCGCGGACCACCGGCCGGCGACGC
TCGGGCAGGCCGCACGGATTGCCGGGGTGACGCCGAGTCTGCCGTTCGAC
GTACAGTACGAGCTTGTGCGCACGATCCGCGGGTTTGAAAATGCGCACAT
TACCCGACCCGGATACGCGATCGAATACGATTATTTCGATCCGCGCGACC
TGAATCCCTGGCTCGAGACGCGGCAGGTTCGCGGGCTGTATTTCGCCGGA
CAGATCAACGGCACAACGGGTTATGAGGAAGCCGCGGCCCAGGGCCTGCT
CGCCGGGGTCAACGCGGCGCTGCGGATCCGGGATCAGGCGCCGTGGTACC
CGCGACGCGACGAAGCCTACCTCGGTGTGCTCGTCGACGATCTCGTTACG
CGCGGAACGAGCGAACCCTACCGGATGTTCACGAGCCGCGCGGAATACCG
GCTGTTGCTGCGCGAGGACAACGCGGATCTGCGCCTGACCCCGATCGGCA
GAGAGCTCGGGCTCGTAGACGATCGCCGCTGGCAGGCATTCTCGACGAAG
CGGGAAGCGCTGGAACGCGAACAACAGCGGCTTGCCGCGAACTGGATGAC
CCCGCAACGGGTACCCGAGGAGATCGCCACACGGGTCCTCGGCAAGCCCC
TGCGCAAGGAGCAGAGCCTCGCGGATCTGCTGCGGCGTCCCGAGGTGGAT
TACGCGGCGCTGATGCAGCTGCCGGGCGCAGGGCCGGGCGTGGGTGACCC
GGAGGTCATCGAACAAATTGAAATCGCCGCGCGCTACAGCGGTTATCTCG
AACGTCAGCGGGATGAAATCGAAAAGCACGAGCGGTACGAGAATGCCCCG
ATCCCGGCCGACCTCGACTATGCCGACGTCCACGGACTGTCGAACGAGAT
CCGCCAGAAGCTCGCGGACCACCGGCCGGCGACGCTCGGGCAGGCCGCAC
GGATTGCCGGGGTGACGCCG
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