mRNA_M-pyrifera_M_contig83841.19580.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig83841.19580.1 vs. uniprot
Match: A0A7R9ZAI7_9STRA (Eukaryotic translation initiation factor 6 n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9ZAI7_9STRA) HSP 1 Score: 248 bits (632), Expect = 7.290e-81 Identity = 121/147 (82.31%), Postives = 139/147 (94.56%), Query Frame = 1 Query: 4 ELQHLRDALPESVKVQRVEERLTALGNCVATNDHVALVHPDLDRETEEIVADTLGVEVFRQTVAGNALVGSYSVLSNLGGIVHPRTSLEDQEELSTLLQVPLVAGTVNRGSDVLGAGMVVNDWAAFTGIDSTSTELSVIEAIFRLNE 444 EL H+R++LP+SVKV+RVEERL+ALGNC+A NDHVALVHPDLDRETEEIVADTLGVEVFRQT+A NALVGSY V SN GG+VHPRT+LEDQEELS+LLQVPLVAGTVNRGSDVLGAG+VVNDW+AF G+D+TSTELSVIE+IF+L + Sbjct: 86 ELLHIRNSLPDSVKVRRVEERLSALGNCIACNDHVALVHPDLDRETEEIVADTLGVEVFRQTIASNALVGSYCVFSNTGGMVHPRTTLEDQEELSSLLQVPLVAGTVNRGSDVLGAGLVVNDWSAFCGLDTTSTELSVIESIFKLQD 232
BLAST of mRNA_M-pyrifera_M_contig83841.19580.1 vs. uniprot
Match: H3G8Q6_PHYRM (Eukaryotic translation initiation factor 6 n=27 Tax=Oomycota TaxID=4762 RepID=H3G8Q6_PHYRM) HSP 1 Score: 246 bits (629), Expect = 1.710e-80 Identity = 121/151 (80.13%), Postives = 140/151 (92.72%), Query Frame = 1 Query: 4 ELQHLRDALPESVKVQRVEERLTALGNCVATNDHVALVHPDLDRETEEIVADTLGVEVFRQTVAGNALVGSYSVLSNLGGIVHPRTSLEDQEELSTLLQVPLVAGTVNRGSDVLGAGMVVNDWAAFTGIDSTSTELSVIEAIFRLNEKKKT 456 E+QH+R+ALP+SV VQRVEERL+ALGNC+ATNDHVALVH DLDRETEEIVADTLGVEVFRQTVAGNALVGSYS LSN G +VHPRTS+EDQEELS+LLQVP+VAGTVNRGSDV+GAG+VVNDW AF G+D+TSTE+SV+E+IF+L + T Sbjct: 80 EMQHIRNALPDSVVVQRVEERLSALGNCIATNDHVALVHTDLDRETEEIVADTLGVEVFRQTVAGNALVGSYSALSNQGCLVHPRTSVEDQEELSSLLQVPVVAGTVNRGSDVIGAGLVVNDWTAFCGLDTTSTEISVVESIFKLQNAQPT 230
BLAST of mRNA_M-pyrifera_M_contig83841.19580.1 vs. uniprot
Match: A0A6H5KDJ3_9PHAE (Eukaryotic translation initiation factor 6 n=2 Tax=PX clade TaxID=569578 RepID=A0A6H5KDJ3_9PHAE) HSP 1 Score: 243 bits (620), Expect = 4.000e-79 Identity = 115/148 (77.70%), Postives = 139/148 (93.92%), Query Frame = 1 Query: 4 ELQHLRDALPESVKVQRVEERLTALGNCVATNDHVALVHPDLDRETEEIVADTLGVEVFRQTVAGNALVGSYSVLSNLGGIVHPRTSLEDQEELSTLLQVPLVAGTVNRGSDVLGAGMVVNDWAAFTGIDSTSTELSVIEAIFRLNEK 447 ELQHLR+ALP+SV +QRVEERL+ALGNC+ TNDHVALVH DLDRETE+++AD LGVEVFRQT+AGNALVGSY+V++N GG+VHPRTS+ED EELS+LLQ+PLVAGTVNRGSDVLGAG+V NDW AF G+D+TSTE+SV+E+IF+LNE+ Sbjct: 80 ELQHLRNALPDSVVIQRVEERLSALGNCIVTNDHVALVHTDLDRETEDLLADVLGVEVFRQTIAGNALVGSYAVITNQGGMVHPRTSIEDIEELSSLLQIPLVAGTVNRGSDVLGAGVVANDWTAFCGLDTTSTEISVVESIFKLNEQ 227
BLAST of mRNA_M-pyrifera_M_contig83841.19580.1 vs. uniprot
Match: A0A7S2R9W4_9STRA (Eukaryotic translation initiation factor 6 n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2R9W4_9STRA) HSP 1 Score: 245 bits (625), Expect = 8.990e-79 Identity = 121/147 (82.31%), Postives = 135/147 (91.84%), Query Frame = 1 Query: 4 ELQHLRDALPESVKVQRVEERLTALGNCVATNDHVALVHPDLDRETEEIVADTLGVEVFRQTVAGNALVGSYSVLSNLGGIVHPRTSLEDQEELSTLLQVPLVAGTVNRGSDVLGAGMVVNDWAAFTGIDSTSTELSVIEAIFRLNE 444 ELQHLR++LP+ V +QRVEERL+ALGNC+ NDHVALVH DLDRETE+IVAD LGVEVFRQTVAGNALVGSY +SN GGIVHPRTS+ED EELS LLQVPLVAGTVNRGSDVLGAGMVVNDW+AF G+D+TSTE+SV+EAIFRLNE Sbjct: 161 ELQHLRNSLPDGVVIQRVEERLSALGNCIVANDHVALVHTDLDRETEDIVADVLGVEVFRQTVAGNALVGSYCRISNQGGIVHPRTSVEDMEELSALLQVPLVAGTVNRGSDVLGAGMVVNDWSAFCGLDTTSTEISVMEAIFRLNE 307
BLAST of mRNA_M-pyrifera_M_contig83841.19580.1 vs. uniprot
Match: A0A482RUG4_9ARCH (Translation initiation factor 6 n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RUG4_9ARCH) HSP 1 Score: 242 bits (617), Expect = 1.140e-78 Identity = 117/146 (80.14%), Postives = 136/146 (93.15%), Query Frame = 1 Query: 1 SELQHLRDALPESVKVQRVEERLTALGNCVATNDHVALVHPDLDRETEEIVADTLGVEVFRQTVAGNALVGSYSVLSNLGGIVHPRTSLEDQEELSTLLQVPLVAGTVNRGSDVLGAGMVVNDWAAFTGIDSTSTELSVIEAIFRL 438 +ELQHLR+ALPES+ +QRVEERL+ALGNC+ TNDHVALVH D+DRETE+I+AD LGVEVFRQTVAGNALVGSY +SN GG+VHPRT++ED EELS+LLQVPLVAGTVNRGSDV+GAG+VVNDWAAF G+D+TSTELSV+E IFRL Sbjct: 79 TELQHLRNALPESIVIQRVEERLSALGNCIVTNDHVALVHTDIDRETEDIIADVLGVEVFRQTVAGNALVGSYCKISNQGGLVHPRTTVEDLEELSSLLQVPLVAGTVNRGSDVVGAGLVVNDWAAFCGMDTTSTELSVVEGIFRL 224
BLAST of mRNA_M-pyrifera_M_contig83841.19580.1 vs. uniprot
Match: V5GGI5_ANOGL (Eukaryotic translation initiation factor 6 n=4 Tax=Cucujiformia TaxID=41088 RepID=V5GGI5_ANOGL) HSP 1 Score: 239 bits (611), Expect = 9.320e-78 Identity = 117/148 (79.05%), Postives = 137/148 (92.57%), Query Frame = 1 Query: 1 SELQHLRDALPESVKVQRVEERLTALGNCVATNDHVALVHPDLDRETEEIVADTLGVEVFRQTVAGNALVGSYSVLSNLGGIVHPRTSLEDQEELSTLLQVPLVAGTVNRGSDVLGAGMVVNDWAAFTGIDSTSTELSVIEAIFRLNE 444 +ELQH+R+ALP+SVKVQRVEERL+ALGN +A ND+VALVHPDLDRETEEI+ADTL VEVFRQT+A N LVGSY VLSN GG+VHP TS+ DQEELS+LLQVPLVAGTVNRGS+V+GAG+VVNDW AF G+D+TSTEL+VIE++FRLNE Sbjct: 79 TELQHIRNALPDSVKVQRVEERLSALGNVIACNDYVALVHPDLDRETEEIIADTLKVEVFRQTIASNVLVGSYCVLSNQGGLVHPNTSIVDQEELSSLLQVPLVAGTVNRGSEVVGAGLVVNDWCAFAGMDTTSTELTVIESVFRLNE 226
BLAST of mRNA_M-pyrifera_M_contig83841.19580.1 vs. uniprot
Match: A0A0D5MF97_CLOEH (IF6 (Fragment) n=1 Tax=Closterium ehrenbergii TaxID=102165 RepID=A0A0D5MF97_CLOEH) HSP 1 Score: 238 bits (607), Expect = 1.050e-77 Identity = 112/147 (76.19%), Postives = 136/147 (92.52%), Query Frame = 1 Query: 4 ELQHLRDALPESVKVQRVEERLTALGNCVATNDHVALVHPDLDRETEEIVADTLGVEVFRQTVAGNALVGSYSVLSNLGGIVHPRTSLEDQEELSTLLQVPLVAGTVNRGSDVLGAGMVVNDWAAFTGIDSTSTELSVIEAIFRLNE 444 E+ H+R+ LPES++VQRVEERL+ALGN + ND+VALVHP+LDRETEEI+AD LGVEVFRQT+AGN LVGSYS LSN G +VHPRTS+EDQ ELS+LLQVPLVAGT+NRGSDV+GAG++VNDWAAF+G+D+TSTE+SV+E+IFRLNE Sbjct: 42 EMMHIRNILPESIRVQRVEERLSALGNVIVCNDYVALVHPELDRETEEIIADVLGVEVFRQTIAGNTLVGSYSALSNKGCLVHPRTSVEDQNELSSLLQVPLVAGTINRGSDVIGAGLIVNDWAAFSGVDTTSTEISVVESIFRLNE 188
BLAST of mRNA_M-pyrifera_M_contig83841.19580.1 vs. uniprot
Match: H6C6N3_EXODN (Eukaryotic translation initiation factor 6 n=21 Tax=Herpotrichiellaceae TaxID=43219 RepID=H6C6N3_EXODN) HSP 1 Score: 239 bits (611), Expect = 1.060e-77 Identity = 113/147 (76.87%), Postives = 137/147 (93.20%), Query Frame = 1 Query: 4 ELQHLRDALPESVKVQRVEERLTALGNCVATNDHVALVHPDLDRETEEIVADTLGVEVFRQTVAGNALVGSYSVLSNLGGIVHPRTSLEDQEELSTLLQVPLVAGTVNRGSDVLGAGMVVNDWAAFTGIDSTSTELSVIEAIFRLNE 444 ELQHLR++LP++VK+QR+EERL+ALGNC+A NDHVALVHPD++RETEEI+ADTLGVEVFRQT+AGN L GSY LSN GGIVHP+TS++DQ+ELS+LLQVPLVAG+VNRGS V+GAGMVVNDW A TG+D+T+TELSVIE++FRL E Sbjct: 80 ELQHLRNSLPDNVKIQRIEERLSALGNCIAANDHVALVHPDIERETEEIIADTLGVEVFRQTIAGNVLTGSYMSLSNQGGIVHPKTSIQDQDELSSLLQVPLVAGSVNRGSPVVGAGMVVNDWLAVTGMDTTATELSVIESVFRLGE 226
BLAST of mRNA_M-pyrifera_M_contig83841.19580.1 vs. uniprot
Match: A0A5A8CW45_CAFRO (Eukaryotic translation initiation factor 6 n=2 Tax=Sar TaxID=2698737 RepID=A0A5A8CW45_CAFRO) HSP 1 Score: 239 bits (610), Expect = 1.320e-77 Identity = 114/146 (78.08%), Postives = 136/146 (93.15%), Query Frame = 1 Query: 1 SELQHLRDALPESVKVQRVEERLTALGNCVATNDHVALVHPDLDRETEEIVADTLGVEVFRQTVAGNALVGSYSVLSNLGGIVHPRTSLEDQEELSTLLQVPLVAGTVNRGSDVLGAGMVVNDWAAFTGIDSTSTELSVIEAIFRL 438 +E+ H+R+ALPE VKV+RVEERL+ALGNC+A NDHVALVHPD+D+ETEEI+AD L VEVFRQTVAGNALVGSY V SN GG+VHPRTS++DQEELS L+QVPLVAGTVNRGSDV+GAG+VVNDWA+F G+D+TSTELSV+E+IF+L Sbjct: 79 AEMLHIRNALPEEVKVRRVEERLSALGNCIACNDHVALVHPDIDKETEEIIADVLDVEVFRQTVAGNALVGSYCVFSNQGGMVHPRTSVDDQEELSALMQVPLVAGTVNRGSDVIGAGLVVNDWASFCGLDTTSTELSVVESIFKL 224
BLAST of mRNA_M-pyrifera_M_contig83841.19580.1 vs. uniprot
Match: A0A8J5QZ27_9HYME (Eukaryotic translation initiation factor 6 n=6 Tax=Hymenoptera TaxID=7399 RepID=A0A8J5QZ27_9HYME) HSP 1 Score: 239 bits (610), Expect = 1.320e-77 Identity = 115/148 (77.70%), Postives = 139/148 (93.92%), Query Frame = 1 Query: 1 SELQHLRDALPESVKVQRVEERLTALGNCVATNDHVALVHPDLDRETEEIVADTLGVEVFRQTVAGNALVGSYSVLSNLGGIVHPRTSLEDQEELSTLLQVPLVAGTVNRGSDVLGAGMVVNDWAAFTGIDSTSTELSVIEAIFRLNE 444 +ELQH+R++LP+SVKVQRVEERL+ALGN VA ND+VALVHPDLDRETEEI+ADTL VEVFRQT+A N LVGSYS+LSN GGIVHP+TS++DQ+ELS+LLQVPLVAGTVNRGS+V+ AGMVVNDWA+F G+D+T TE+SVIE++F+LNE Sbjct: 79 NELQHIRNSLPDSVKVQRVEERLSALGNVVACNDYVALVHPDLDRETEEILADTLNVEVFRQTIASNVLVGSYSILSNQGGIVHPKTSIQDQDELSSLLQVPLVAGTVNRGSEVIAAGMVVNDWASFCGMDTTGTEISVIESVFKLNE 226 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig83841.19580.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig83841.19580.1 >prot_M-pyrifera_M_contig83841.19580.1 ID=prot_M-pyrifera_M_contig83841.19580.1|Name=mRNA_M-pyrifera_M_contig83841.19580.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=152bp SELQHLRDALPESVKVQRVEERLTALGNCVATNDHVALVHPDLDRETEEIback to top mRNA from alignment at M-pyrifera_M_contig83841:3..458+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig83841.19580.1 ID=mRNA_M-pyrifera_M_contig83841.19580.1|Name=mRNA_M-pyrifera_M_contig83841.19580.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=456bp|location=Sequence derived from alignment at M-pyrifera_M_contig83841:3..458+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig83841:3..458+ >mRNA_M-pyrifera_M_contig83841.19580.1 ID=mRNA_M-pyrifera_M_contig83841.19580.1|Name=mRNA_M-pyrifera_M_contig83841.19580.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=912bp|location=Sequence derived from alignment at M-pyrifera_M_contig83841:3..458+ (Macrocystis pyrifera P11B4 male)back to top |