mRNA_M-pyrifera_M_contig83428.19480.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig83428.19480.1
Unique NamemRNA_M-pyrifera_M_contig83428.19480.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig83428.19480.1 vs. uniprot
Match: A0A7Y2IDE0_9ACTN (Uncharacterized protein n=1 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A7Y2IDE0_9ACTN)

HSP 1 Score: 335 bits (859), Expect = 6.240e-105
Identity = 167/266 (62.78%), Postives = 200/266 (75.19%), Query Frame = 1
Query:    1 WTDGCIGSMEGLYFESSATTPFHFLNQSVLSENPSRAQRDLPYRGFDINTGIAQLRVMGVRYYMAQTDSAIAAARTRNDLVEVATSQPWVIFEITDNQLVEGLDTMPVVASGPAG--MGELAGRFETGWVSQAVAFYNQPQNFEAIPAEDGPDDWDRVDVLLPSDGEAVSTPAVVSDIVVENDRISFSVDQIGVPVLVKASYFPNWKASGADGPYRAGPNLMVVVPTDTEVEVHYGRTLIDMLGYALTFLGLVGLAGLVVADHRRR 792
            WTDGCIGSMEGLYFESSATTPFHFLNQS LS +PSRAQRDLPY+ F+I+ GIAQL+  GVRYYMAQ+D AIAAA     L +VA SQP++I+E++D  LVE L   PVVA+GP+   + E++GRF+ GW SQAVAFYN PQ F+A+PAE GP DWD V  L+PSDG  V T A VSD+ V    +SF+VDQ+G PVLVK SYFPNW  SGADGPYRAGPN+MVVVPT+T V + YG T ++ + + L  LGL  +A L     R R
Sbjct:  610 WTDGCIGSMEGLYFESSATTPFHFLNQSTLSTSPSRAQRDLPYQDFNIDRGIAQLQTTGVRYYMAQSDEAIAAAAVHPSLTQVAESQPFIIYEVSDAPLVEALAFEPVVATGPSADAITEISGRFDVGWESQAVAFYNDPQTFQALPAESGPSDWDEVSTLIPSDGTPVPT-ATVSDVSVGQSSVSFTVDQVGTPVLVKMSYFPNWDVSGADGPYRAGPNMMVVVPTETTVRLSYGNTWVEYMSFLLFALGLGAVAVLAYEGARPR 874          
BLAST of mRNA_M-pyrifera_M_contig83428.19480.1 vs. uniprot
Match: A0A6N7FLK8_9ACTN (PTPS_related domain-containing protein n=1 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A6N7FLK8_9ACTN)

HSP 1 Score: 294 bits (753), Expect = 1.230e-88
Identity = 143/257 (55.64%), Postives = 181/257 (70.43%), Query Frame = 1
Query:    1 WTDGCIGSMEGLYFESSATTPFHFLNQSVLSENPSRAQRDLPYRGFDINTGIAQLRVMGVRYYMAQTDSAIAAARTRNDLVEVATSQPWVIFEITDNQLVEGLDTMPVVASGPAGMGELAGRFETGWVSQAVAFYNQPQNFEAIPAEDGPDDWDRVDVLLPSDGEAVSTPAVVSDIVVENDRISFSVDQIGVPVLVKASYFPNWKASGADGPYRAGPNLMVVVPTDTEVEVHYGRTLIDMLGYALTFLGLVGLAGLV 771
            WTDGCIGSMEGL+FESSATTP+HFL QSVLS  PSR QR++PY+ FDI+TG+ QL+ MGVRYY+A +++A AAA  + +L  ++ S PWV++E+ D++LV GLD  PVV            +++  W+  A A YN P ++E + A  GPD+W RV                VSDI  +ND ISFSVDQ+G PVLVKASYFPNWKA GADGPYR  PNLMVVVPT  +V + YG+T +D+L +ALTFLG+ GLA LV
Sbjct:  551 WTDGCIGSMEGLFFESSATTPYHFLTQSVLSAQPSRPQREIPYQNFDIDTGVRQLQEMGVRYYLAYSETAKAAANAKPELTRISESGPWVVYEVADSELVAGLDNQPVVLDD-------IHQYQKDWLPVAAALYNDPDSWEVLRAAGGPDEWQRVSSTQQQPPTTAVANVAVSDIRTDNDSISFSVDQVGQPVLVKASYFPNWKADGADGPYRVMPNLMVVVPTSQDVTLSYGQTPVDVLAWALTFLGMAGLALLV 800          
BLAST of mRNA_M-pyrifera_M_contig83428.19480.1 vs. uniprot
Match: A0A7V9EYA9_9ACTN (Uncharacterized protein n=2 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A7V9EYA9_9ACTN)

HSP 1 Score: 273 bits (699), Expect = 9.850e-83
Identity = 148/282 (52.48%), Postives = 184/282 (65.25%), Query Frame = 1
Query:    1 WTDGCIGSMEGLYFESSATTPFHFLNQSVLSENPSRAQRDLPYRGFDINTGIAQLRVMGVRYYMAQTDSAIAAARTRNDLVEVATSQPWVIFEITDNQLVEGLDTMPVVASGPAGMGELAGRFETGWVSQAVAFYNQPQNFEAIPAEDGPDDWDRVDVLLPSDG---EAVSTPAVVSDIVVENDRISFSVDQIGVPVLVKASYFPNWKASGADGPYRAGPNLMVVVPTDTEVEVHYGRTLIDMLGYALTFLGLVGLAGLVV------ADHRRRNDSTDPGAP 819
            +TDGCIGSMEGL+FE+S TTP+HFLNQS LS +PSRAQRDLPY   D+  G+  L+++GVRYYMA +  A+A A+T ++L EVA+ + W ++E+ D +LV  LD  PVV  G A  GE        W+  AV +Y  P   +   A DGP  W R    +P +G   E    P  VSDI    D ISF VD+ G PVLVK SYFPNW+ASGADGP+R  PNLMVVVPT  EVE+ YG T ID++G+AL+ LG+ GLAGLVV      +D RRR   TD   P
Sbjct:  495 FTDGCIGSMEGLFFEASTTTPYHFLNQSELSASPSRAQRDLPYGPLDVERGVEHLQLLGVRYYMAFSPEAVAQAQTVSELTEVASVEGWHVYEVADTELVAPLDAEPVVLEGVAKGGEE-------WLDVAVDWYMDPAAQDVFLAADGPSSWAR----MPPEGRPEEEPVAPVEVSDINAGTDSISFRVDRPGTPVLVKTSYFPNWQASGADGPWRVAPNLMVVVPTTNEVELRYGTTPIDVMGWALSLLGMAGLAGLVVKGPVAFSDRRRRTVETDGTTP 765          
BLAST of mRNA_M-pyrifera_M_contig83428.19480.1 vs. uniprot
Match: A0A6G0A3B4_9ACTN (Uncharacterized protein n=2 Tax=Bacteria TaxID=2 RepID=A0A6G0A3B4_9ACTN)

HSP 1 Score: 270 bits (691), Expect = 8.200e-81
Identity = 141/260 (54.23%), Postives = 177/260 (68.08%), Query Frame = 1
Query:    1 WTDGCIGSMEGLYFESSATTPFHFLNQSVLSENPSRAQRDLPYRGFDINTGIAQLRVMGVRYYMAQTDSAIAAARTRNDLVEVATSQPWVIFEITDNQLVEGLDTMPVVASGPAGMGELAGRFETGWVSQAVAFYNQPQNFEAIPAEDGPDDWDRVDVLLPSDGEAVST-PAVVSDIVVENDRISFSVDQIGVPVLVKASYFPNWKASGADGPYRAGPNLMVVVPTDTEVEVHYGRTLIDMLGYALTFLGLVGLAGLVVA 777
            WTDGCIGSMEGLYFE+S+TTP+HFLNQS LS  PSRAQRDLPYRGFDI+ GI  L+++GV+YY+A ++ AI  AR    L EVATS PWV+FE+ D++LVE L  +P V +         G     W+  +V +Y     ++   A DGPD+W  ++V    D E V   P  VS I    D ISF VD++G PVLVKASYFPNWK  GADGPYR  PNLMVVVPT+  VE++YGRT +D++   L+  GLV L GL++A
Sbjct:  620 WTDGCIGSMEGLYFEASSTTPYHFLNQSELSTQPSRAQRDLPYRGFDIDKGIEHLQLLGVKYYLATSERAIEDARGHPALSEVATSGPWVVFEVADSELVEPLANLPAVWTD-------VGHSIHEWLDPSVDWYQDSDEWDVFRAVDGPDEWQEIEVG--EDPERVPVAPTEVSGIDATGDTISFDVDEVGTPVLVKASYFPNWKVRGADGPYRVTPNLMVVVPTERHVELYYGRTPVDIVSILLSVAGLV-LVGLLLA 869          
BLAST of mRNA_M-pyrifera_M_contig83428.19480.1 vs. uniprot
Match: A0A6J7UVB0_9ZZZZ (Unannotated protein n=1 Tax=freshwater metagenome TaxID=449393 RepID=A0A6J7UVB0_9ZZZZ)

HSP 1 Score: 254 bits (650), Expect = 1.240e-80
Identity = 139/307 (45.28%), Postives = 180/307 (58.63%), Query Frame = 1
Query:    1 WTDGCIGSMEGLYFESSATTPFHFLNQSVLSENPSRAQRDLPYRGFDINTGIAQLRVMGVRYYMAQTDSAIAAARTRNDLVEVAT-------------SQPWVIFEITDNQLVEGLDTMPVVASGPAGMGELAGRFETGWV-----------------------SQAVAFYNQPQNFEAIPAEDGPDDWDRVDVLLPSDGEAVSTPAVVSDIVVENDRISFSVDQIGVPVLVKASYFPNWKASGADGPYRAGPNLMVVVPTDTEVEVHYGRTLIDMLGYALTFLGLVGLAGLVVADHRRR-NDSTDP 810
            +TDGC+GSMEGLYFE+S+TTPFHFL QS LS  PSRAQR+LPY  F+I  G++ L+++GV+YYMA T SAI AA+T   L +VA              +  W +FE+ D++LV  L+  PVV +        A     GWV                         AV ++N P  ++ + A  GP+DW R      S  +  + P+ VS+IV   D I F VD++GVPVLVK SYFPNW ASGA+GPYR  PN MVVVPT+  V + YG +  D+LG+  T +GLVGL GL V DH RR  D  +P
Sbjct:    9 YTDGCVGSMEGLYFEASSTTPFHFLTQSELSTAPSRAQRELPYNSFNIQQGVSHLQLLGVKYYMATTASAIEAAKTEPRLTQVANETFTYSDTAGTPQTTNWAVFEVADSELVVPLENDPVVVTD-------ADDHIDGWVYSKERLPPTEAQIEASIQGSKTAGPAVTWFNDPTKWDVLLATSGPEDWPRATAADASSEKQPNPPSKVSNIVTTQDSIEFDVDKVGVPVLVKISYFPNWHASGAEGPYRVSPNFMVVVPTEKHVSMSYGYSKYDILGWLATIIGLVGLGGLAVLDHGRRLRDEGEP 308          
BLAST of mRNA_M-pyrifera_M_contig83428.19480.1 vs. uniprot
Match: A0A3N5KDW9_9ACTN (Uncharacterized protein n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A3N5KDW9_9ACTN)

HSP 1 Score: 253 bits (647), Expect = 8.300e-80
Identity = 130/258 (50.39%), Postives = 168/258 (65.12%), Query Frame = 1
Query:    1 WTDGCIGSMEGLYFESSATTPFHFLNQSVLSENPSRAQRDLPYRGFDINTGIAQLRVMGVRYYMAQTDSAIAAARTRNDLVEVATSQPWVIFEITDNQLVEGLDTMPVVASGPAGMGELAGRFETGWVSQAVAFYNQPQNFEAIPAEDGPDDWDRVDV-LLPSDGEAVSTPAVVSDIVVENDRISFSVDQIGVPVLVKASYFPNWKASGADGPYRAGPNLMVVVPTDTEVEVHYGRTLIDMLGYALTFLGLVGLAGLV 771
            WTDGCIGSMEGL+FESSATTP+HFL  S LS  PSR  R+L Y   D+  G+  ++++GVRYYMA + +A+  AR    L E+A+S PWVIFE+ D+++V  L+  P V  G       A +    W+     F+  P+ +    A  GPD W R++V  +P   E    P  V++I  ++DRISF VD++GVPVLVKASYFPNW+ASGADGP+R  PNLMVVVPT   V +HYGRT ID+ G  LT LG  GL  L+
Sbjct:   36 WTDGCIGSMEGLFFESSATTPYHFLASSALSAAPSRPVRNLRYDPLDVPKGVQYMQLLGVRYYMAFSPAAVKMAREDQGLTEIASSGPWVIFEVADSEIVAPLENEPAVVEG-------ADKNSKSWLRVGEDFFLDPETWNVELAASGPDAWQRIEVGQVPE--ERPLQPVEVTNITTDDDRISFDVDRVGVPVLVKASYFPNWQASGADGPWRVTPNLMVVVPTSEHVSLHYGRTPIDIAGILLTLLGFAGLFWLI 284          
BLAST of mRNA_M-pyrifera_M_contig83428.19480.1 vs. uniprot
Match: A0A538J8U1_9ACTN (PTPS_related domain-containing protein n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A538J8U1_9ACTN)

HSP 1 Score: 264 bits (675), Expect = 2.210e-79
Identity = 144/285 (50.53%), Postives = 180/285 (63.16%), Query Frame = 1
Query:    1 WTDGCIGSMEGLYFESSATTPFHFLNQSVLSENPSRAQRDLPYRGFDINTGIAQLRVMGVRYYMAQTDSAIAAARTRNDLVEVATSQPWVIFEITDNQLVEGLDTMPVVASGPAGMGELAGRFETGWVSQAVAFYNQPQNFEAIPAEDGPDDWDRVDVL---LPSDGEAVS------------TPAVVSDIVVENDRISFSVDQIGVPVLVKASYFPNWKASGADGPYRAGPNLMVVVPTDTEVEVHYGRTLIDMLGYALTFLGLVGLAGLVVADHRRRNDSTDP 810
            WT GCIGSMEGL+FES+ TTP+HFLNQS LS+ PSRA R LPYRG D+ +G+  L+++GVRYY+A T +A+A A    DL  +A S PW ++E+  +  V GL   P V  G A  G   GR+ T W+  AVAFY  PQ+++   A DGP  W RV V    + +DG A S             PA VS I   +DRISF VD+ G PVLVKASYFPNWKASGA GP+R  PNLMVV+PT   V +HYG T++D +G+ +T   L GLA +VV   R   D   P
Sbjct:  490 WTKGCIGSMEGLFFESAGTTPYHFLNQSELSQTPSRAMRSLPYRGLDVTSGVQHLQLLGVRYYLAFTSAAVAQADADPDLRLIARSNPWKVYEVAGSAEVVGLRNEPAVVEGIAKSG---GRYRTDWLDLAVAFYQNPQSWDVPLAIDGPKSWPRVGVRRTGVETDGTAGSDIRIDRPARRPVAPAKVSAIRTTDDRISFDVDRPGTPVLVKASYFPNWKASGAKGPWRVTPNLMVVIPTQKHVSLHYGWTVVDGVGWLIT---LGGLAAVVVLVRRGSLDFPQP 768          
BLAST of mRNA_M-pyrifera_M_contig83428.19480.1 vs. uniprot
Match: A0A7W0LSJ0_9ACTN (PTPS_related domain-containing protein (Fragment) n=1 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A7W0LSJ0_9ACTN)

HSP 1 Score: 264 bits (674), Expect = 3.040e-79
Identity = 142/274 (51.82%), Postives = 174/274 (63.50%), Query Frame = 1
Query:    1 WTDGCIGSMEGLYFESSATTPFHFLNQSVLSENPSRAQRDLPYRGFDINTGIAQLRVMGVRYYMAQTDSAIAAARTRNDLVEVATSQPWVIFEITDNQLVEGLDTMPVVASGPAGMGELAGRFETGWVSQAVAFYNQPQNFEAIPAEDGPDDWDRVDVLLPSDGEAVSTPAVVSDIVVENDRISFSVDQIGVPVLVKASYFPNWKASGADGPYRAGPNLMVVVPTDTEVEVHYGRTLIDMLGYALTFLGLVGLAGLVVADHRRRNDSTDPGAPD 822
            WTDGCIGSMEGLYFE+SATTP+HFLNQ+ LS  PS AQR LPY   D+  G+  L+++GVRYYMA + +A+ AA    DL  VA S PW ++E+  + LVE LD  PVV  G     +  GR    W+  A+ +Y   ++ +   A DGP  W R+D      G     P VVSD+    DRISF VDQIG PVLVK+SYFPNW+ASGADGP+R  PN MVVVPT+ +VE+ YG T +D   +ALT LGLVGL  LV     RR     P  PD
Sbjct:  499 WTDGCIGSMEGLYFEASATTPYHFLNQAELSAKPSSAQRALPYGTLDVERGVEHLKLLGVRYYMAFSSTAVDAANADPDLTLVADSGPWQVYEVAGSDLVEPLDAEPVVVRGV----DEGGR---NWLDPAIDWYLDEESQDVFLAADGPGSWARIDEG-DDPGRRPVAPVVVSDVRTATDRISFDVDQIGTPVLVKSSYFPNWEASGADGPWRVAPNFMVVVPTERQVELSYGTTFVDSGAWALTVLGLVGLVLLV-----RRGPVPMPAPPD 759          
BLAST of mRNA_M-pyrifera_M_contig83428.19480.1 vs. uniprot
Match: A0A2N5JWS6_9ACTN (PTPS_related domain-containing protein n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A2N5JWS6_9ACTN)

HSP 1 Score: 260 bits (665), Expect = 1.180e-77
Identity = 143/287 (49.83%), Postives = 174/287 (60.63%), Query Frame = 1
Query:    1 WTDGCIGSMEGLYFESSATTPFHFLNQSVLSENPSRAQRDLPYRGFDINTGIAQLRVMGVRYYMAQTDSAIAAARTRNDLVEVATSQP-------------WVIFEITDNQLVEGLDTMPVVASGPAGMGELAGRFETGWVSQAVAFYNQPQNFEAIPAEDGPDDWDRVDVLLPSDGEAVSTPAVVSDIVVENDRISFSVDQIGVPVLVKASYFPNWKASGADGPYRAGPNLMVVVPTDTEVEVHYGRTLIDMLGYALTFLGLVGLAGLVVADHRRRNDSTDPGAPD 822
            WT+GCI SMEGLYFESSATTPFHFL  S L++ PS  QR LPYRG D+ TG+  L ++GVRYYMA +  A   AR   DL  VA++ P             W I+E+  + +V  L+  PVV +G        GR E  W+  AV +Y     +    A DGPD+W RV   + +       PAVV+ +   +DRISF VD+ G PVLVKASYFPNWKASGA GP+R  PNLMVVVPT+  VE+HYG  L D +GY LT  GLV LA LVV   RRR+    PG  D
Sbjct:  473 WTNGCIASMEGLYFESSATTPFHFLAASELTKRPSNPQRGLPYRGLDVATGVEHLELLGVRYYMAISPDAQQQARQHPDLRMVASTGPHTVNYPEGPAERRWEIYEVRGSGIVAPLENEPVVMTG-------VGRGEKAWLDAAVGWYQDSSRWSVPLAADGPDEWRRVSGAVANPPRRAVRPAVVAGVRSGDDRISFDVDRPGSPVLVKASYFPNWKASGAKGPWRVTPNLMVVVPTERHVELHYGYALADKVGYVLTGFGLVALAALVVQARRRRDVDQVPGDRD 752          
BLAST of mRNA_M-pyrifera_M_contig83428.19480.1 vs. uniprot
Match: A0A7K0WLX4_9ACTN (Uncharacterized protein n=3 Tax=root TaxID=1 RepID=A0A7K0WLX4_9ACTN)

HSP 1 Score: 260 bits (665), Expect = 2.080e-76
Identity = 138/301 (45.85%), Postives = 182/301 (60.47%), Query Frame = 1
Query:    1 WTDGCIGSMEGLYFESSATTPFHFLNQSVLSENPSRAQRDLPYRGFDINTGIAQLRVMGVRYYMAQTDSAIAAARTRNDLVEVAT-------------SQPWVIFEITDNQLVEGLDTMPVVASG---------------PAGMGELAGRFETGWV-SQAVAFYNQPQNFEAIPAEDGPDDWDRVDVLLPSDGEAVSTPAVVSDIVVENDRISFSVDQIGVPVLVKASYFPNWKASGADGPYRAGPNLMVVVPTDTEVEVHYGRTLIDMLGYALTFLGLVGLAGLVVADHRRRNDSTDPGA 816
            +TDGC+GSMEGLYFE+S+TTPFHFL QS LS  PSRAQR+LPY  F+I+ G++ L+++GV+YYMA T +AIAAA+T + L +VA              +  W +FE+ D++LV  L+  PVV +                PA   ++    +       AV ++N P  ++ + A  GP+DW R      S  +  + P  VS+IV   D I F VD++G PVLVK SYFPNW ASGA+GPYR  PN MVVVPT+  V + YG +  D+LGY  TF GL+ LAGL V DHRRR    D  A
Sbjct:  720 YTDGCVGSMEGLYFEASSTTPFHFLTQSELSTAPSRAQRELPYNSFNISEGVSHLQLLGVKYYMATTPAAIAAAKTESRLTQVANETFTYSDTAGTPQTTNWAVFEVADSELVVPLENDPVVVTDADDHIDGWVYSKERLPATAAQIEAAVQGSKAPGPAVTWFNDPTKWDVLLATSGPEDWPRATAAEASSQKQPNPPIKVSNIVTTQDSIEFDVDKVGEPVLVKISYFPNWHASGAEGPYRVSPNFMVVVPTEKHVSMGYGYSKFDILGYLATFFGLIALAGLAVLDHRRRIRDEDDSA 1020          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig83428.19480.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7Y2IDE0_9ACTN6.240e-10562.78Uncharacterized protein n=1 Tax=Acidimicrobiales b... [more]
A0A6N7FLK8_9ACTN1.230e-8855.64PTPS_related domain-containing protein n=1 Tax=Aci... [more]
A0A7V9EYA9_9ACTN9.850e-8352.48Uncharacterized protein n=2 Tax=Acidimicrobiia bac... [more]
A0A6G0A3B4_9ACTN8.200e-8154.23Uncharacterized protein n=2 Tax=Bacteria TaxID=2 R... [more]
A0A6J7UVB0_9ZZZZ1.240e-8045.28Unannotated protein n=1 Tax=freshwater metagenome ... [more]
A0A3N5KDW9_9ACTN8.300e-8050.39Uncharacterized protein n=1 Tax=Actinomycetia bact... [more]
A0A538J8U1_9ACTN2.210e-7950.53PTPS_related domain-containing protein n=1 Tax=Act... [more]
A0A7W0LSJ0_9ACTN3.040e-7951.82PTPS_related domain-containing protein (Fragment) ... [more]
A0A2N5JWS6_9ACTN1.180e-7749.83PTPS_related domain-containing protein n=1 Tax=Act... [more]
A0A7K0WLX4_9ACTN2.080e-7645.85Uncharacterized protein n=3 Tax=root TaxID=1 RepID... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig83428contigM-pyrifera_M_contig83428:72..893 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score224.6
Seed ortholog evalue5.6e-56
Seed eggNOG ortholog1229780.BN381_10199
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Psort location CytoplasmicMembrane, score
EggNOG OGs2H32H@201174,COG5617@1,COG5617@2
COG Functional cat.S
Best tax levelActinobacteria
Best eggNOG OGNA|NA|NA
Exons1
Model size822
Cds size798
Stop0
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816741.1379833-CDS-M-pyrifera_M_contig83428:71..8691622816741.1379833-CDS-M-pyrifera_M_contig83428:71..869Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig83428 72..869 -
1692278150.6779552-CDS-M-pyrifera_M_contig83428:71..8691692278150.6779552-CDS-M-pyrifera_M_contig83428:71..869Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig83428 72..869 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816741.1525025-UTR-M-pyrifera_M_contig83428:869..8931622816741.1525025-UTR-M-pyrifera_M_contig83428:869..893Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig83428 870..893 -
1692278150.6892006-UTR-M-pyrifera_M_contig83428:869..8931692278150.6892006-UTR-M-pyrifera_M_contig83428:869..893Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig83428 870..893 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig83428.19480.1prot_M-pyrifera_M_contig83428.19480.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig83428 72..869 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig83428.19480.1

>prot_M-pyrifera_M_contig83428.19480.1 ID=prot_M-pyrifera_M_contig83428.19480.1|Name=mRNA_M-pyrifera_M_contig83428.19480.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=266bp
MEGLYFESSATTPFHFLNQSVLSENPSRAQRDLPYRGFDINTGIAQLRVM
GVRYYMAQTDSAIAAARTRNDLVEVATSQPWVIFEITDNQLVEGLDTMPV
VASGPAGMGELAGRFETGWVSQAVAFYNQPQNFEAIPAEDGPDDWDRVDV
LLPSDGEAVSTPAVVSDIVVENDRISFSVDQIGVPVLVKASYFPNWKASG
ADGPYRAGPNLMVVVPTDTEVEVHYGRTLIDMLGYALTFLGLVGLAGLVV
ADHRRRNDSTDPGAPD
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mRNA from alignment at M-pyrifera_M_contig83428:72..893-

Legend: UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig83428.19480.1 ID=mRNA_M-pyrifera_M_contig83428.19480.1|Name=mRNA_M-pyrifera_M_contig83428.19480.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=822bp|location=Sequence derived from alignment at M-pyrifera_M_contig83428:72..893- (Macrocystis pyrifera P11B4 male)
TGGACCGACGGGTGTATCGGTTCGATGGAGGGCCTCTACTTCGAGTCGTC GGCCACCACGCCGTTCCACTTCCTCAACCAGTCGGTGTTGTCCGAGAACC CATCCCGAGCGCAGCGCGATCTGCCGTACCGAGGCTTCGACATCAACACT GGTATCGCCCAGCTGCGGGTGATGGGCGTTCGCTACTACATGGCCCAGAC CGACTCCGCCATCGCCGCAGCCCGTACTCGCAACGACCTGGTCGAGGTGG CGACATCTCAACCGTGGGTCATCTTCGAGATCACCGACAACCAGTTGGTC GAAGGGCTCGACACCATGCCGGTCGTGGCCTCGGGGCCGGCCGGCATGGG CGAACTCGCCGGACGCTTCGAGACCGGTTGGGTCAGCCAGGCGGTTGCCT TCTACAACCAGCCCCAGAACTTCGAGGCGATCCCGGCAGAAGACGGCCCC GACGACTGGGACCGGGTCGATGTCCTGCTGCCGAGTGATGGTGAAGCGGT CTCCACTCCGGCGGTCGTCTCCGACATCGTCGTCGAGAACGATCGCATCT CGTTCTCGGTCGACCAGATCGGGGTGCCCGTCCTGGTCAAGGCCTCGTAC TTCCCGAACTGGAAGGCCAGCGGGGCCGACGGTCCGTATCGGGCAGGCCC GAACCTGATGGTGGTCGTCCCGACCGACACCGAGGTCGAGGTCCACTACG GTCGCACGCTCATCGACATGCTCGGCTACGCCCTGACGTTCCTCGGTCTC GTCGGTCTCGCCGGACTCGTCGTCGCCGACCACCGCCGAAGGAACGATTC GACCGACCCGGGCGCTCCCGAT
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig83428:72..893-

>mRNA_M-pyrifera_M_contig83428.19480.1 ID=mRNA_M-pyrifera_M_contig83428.19480.1|Name=mRNA_M-pyrifera_M_contig83428.19480.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1596bp|location=Sequence derived from alignment at M-pyrifera_M_contig83428:72..893- (Macrocystis pyrifera P11B4 male)
ATGGAGGGCCTCTACTTCGAGTCGTCGGCCACCACGCCGTTCCACTTCCT
CAACCAGTCGGTGTTGTCCGAGAACCCATCCCGAGCGCAGCGCGATCTGC
CGTACCGAGGCTTCGACATCAACACTGGTATCGCCCAGCTGCGGGTGATG
GGCGTTCGCTACTACATGGCCCAGACCGACTCCGCCATCGCCGCAGCCCG
TACTCGCAACGACCTGGTCGAGGTGGCGACATCTCAACCGTGGGTCATCT
TCGAGATCACCGACAACCAGTTGGTCGAAGGGCTCGACACCATGCCGGTC
GTGGCCTCGGGGCCGGCCGGCATGGGCGAACTCGCCGGACGCTTCGAGAC
CGGTTGGGTCAGCCAGGCGGTTGCCTTCTACAACCAGCCCCAGAACTTCG
AGGCGATCCCGGCAGAAGACGGCCCCGACGACTGGGACCGGGTCGATGTC
CTGCTGCCGAGTGATGGTGAAGCGGTCTCCACTCCGGCGGTCGTCTCCGA
CATCGTCGTCGAGAACGATCGCATCTCGTTCTCGGTCGACCAGATCGGGG
TGCCCGTCCTGGTCAAGGCCTCGTACTTCCCGAACTGGAAGGCCAGCGGG
GCCGACGGTCCGTATCGGGCAGGCCCGAACCTGATGGTGGTCGTCCCGAC
CGACACCGAGGTCGAGGTCCACTACGGTCGCACGCTCATCGACATGCTCG
GCTACGCCCTGACGTTCCTCGGTCTCGTCGGTCTCGCCGGACTCGTCGTC
GCCGACCACCGCCGAAGGAACGATTCGACCGACCCGGGCGCTCCCGATAT
GGAGGGCCTCTACTTCGAGTCGTCGGCCACCACGCCGTTCCACTTCCTCA
ACCAGTCGGTGTTGTCCGAGAACCCATCCCGAGCGCAGCGCGATCTGCCG
TACCGAGGCTTCGACATCAACACTGGTATCGCCCAGCTGCGGGTGATGGG
CGTTCGCTACTACATGGCCCAGACCGACTCCGCCATCGCCGCAGCCCGTA
CTCGCAACGACCTGGTCGAGGTGGCGACATCTCAACCGTGGGTCATCTTC
GAGATCACCGACAACCAGTTGGTCGAAGGGCTCGACACCATGCCGGTCGT
GGCCTCGGGGCCGGCCGGCATGGGCGAACTCGCCGGACGCTTCGAGACCG
GTTGGGTCAGCCAGGCGGTTGCCTTCTACAACCAGCCCCAGAACTTCGAG
GCGATCCCGGCAGAAGACGGCCCCGACGACTGGGACCGGGTCGATGTCCT
GCTGCCGAGTGATGGTGAAGCGGTCTCCACTCCGGCGGTCGTCTCCGACA
TCGTCGTCGAGAACGATCGCATCTCGTTCTCGGTCGACCAGATCGGGGTG
CCCGTCCTGGTCAAGGCCTCGTACTTCCCGAACTGGAAGGCCAGCGGGGC
CGACGGTCCGTATCGGGCAGGCCCGAACCTGATGGTGGTCGTCCCGACCG
ACACCGAGGTCGAGGTCCACTACGGTCGCACGCTCATCGACATGCTCGGC
TACGCCCTGACGTTCCTCGGTCTCGTCGGTCTCGCCGGACTCGTCGTCGC
CGACCACCGCCGAAGGAACGATTCGACCGACCCGGGCGCTCCCGAT
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