mRNA_M-pyrifera_M_contig83085.19409.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig83085.19409.1
Unique NamemRNA_M-pyrifera_M_contig83085.19409.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig83085.19409.1 vs. uniprot
Match: A0A2E5K8V1_9PLAN (Aldo/keto reductase n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A2E5K8V1_9PLAN)

HSP 1 Score: 139 bits (349), Expect = 1.480e-38
Identity = 62/79 (78.48%), Postives = 69/79 (87.34%), Query Frame = 1
Query:    1 EHCQKHDINIAQLALQFSVANEDMTTCITGSANPTRVRQWAEWIEQPLDEQLLKDVQEILASIHNWFYIEGRPGNNDPR 237
            EHC +  I+IAQLALQFS+ANEDMTTCITGSAN  R+RQWAEW EQPLD+ LL +VQEILA IHNWFYIEGRP NNDP+
Sbjct:  234 EHCMEAGIDIAQLALQFSIANEDMTTCITGSANQQRIRQWAEWAEQPLDQTLLTEVQEILAPIHNWFYIEGRPENNDPQ 312          
BLAST of mRNA_M-pyrifera_M_contig83085.19409.1 vs. uniprot
Match: A0A3E0PTS2_9BACT (Aldo/keto reductase n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A3E0PTS2_9BACT)

HSP 1 Score: 134 bits (337), Expect = 8.770e-37
Identity = 58/79 (73.42%), Postives = 70/79 (88.61%), Query Frame = 1
Query:    1 EHCQKHDINIAQLALQFSVANEDMTTCITGSANPTRVRQWAEWIEQPLDEQLLKDVQEILASIHNWFYIEGRPGNNDPR 237
            EHC K+  +IA+LALQFS+AN DMTTC+ GSAN  RVRQWAEWI++P+DEQLL++V+EILA IHNWFYIEGRP NNDP+
Sbjct:  234 EHCTKNGSDIAKLALQFSIANPDMTTCVAGSANAGRVRQWAEWIKEPIDEQLLREVREILAPIHNWFYIEGRPENNDPQ 312          
BLAST of mRNA_M-pyrifera_M_contig83085.19409.1 vs. uniprot
Match: A0A836VT53_9PLAN (Aldo/keto reductase n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A836VT53_9PLAN)

HSP 1 Score: 128 bits (322), Expect = 1.140e-36
Identity = 55/77 (71.43%), Postives = 65/77 (84.42%), Query Frame = 1
Query:    1 EHCQKHDINIAQLALQFSVANEDMTTCITGSANPTRVRQWAEWIEQPLDEQLLKDVQEILASIHNWFYIEGRPGNND 231
            EHC+   I+IAQLALQFS+A+ DM TC+TGSANP RVRQWAEW EQPLD+QL+ ++Q IL  IHNWFY+EGRP NND
Sbjct:   41 EHCRSKGIDIAQLALQFSIAHPDMATCVTGSANPDRVRQWAEWAEQPLDQQLVAELQAILKPIHNWFYVEGRPENND 117          
BLAST of mRNA_M-pyrifera_M_contig83085.19409.1 vs. uniprot
Match: A0A517Z546_9PLAN (D-threo-aldose 1-dehydrogenase n=1 Tax=Maioricimonas rarisocia TaxID=2528026 RepID=A0A517Z546_9PLAN)

HSP 1 Score: 132 bits (331), Expect = 6.590e-36
Identity = 57/77 (74.03%), Postives = 68/77 (88.31%), Query Frame = 1
Query:    1 EHCQKHDINIAQLALQFSVANEDMTTCITGSANPTRVRQWAEWIEQPLDEQLLKDVQEILASIHNWFYIEGRPGNND 231
            E C++   ++A+LALQFSVANE+MTTC+TGSANP RVRQWAEWIE+P+DEQLL DVQ+IL  IHNWFY+EGRP NND
Sbjct:  234 ERCKEAGSDLAKLALQFSVANEEMTTCVTGSANPNRVRQWAEWIEEPIDEQLLADVQKILEPIHNWFYVEGRPENND 310          
BLAST of mRNA_M-pyrifera_M_contig83085.19409.1 vs. uniprot
Match: A0A2E7CYB6_9PLAN (Aldo/keto reductase n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A2E7CYB6_9PLAN)

HSP 1 Score: 131 bits (330), Expect = 9.700e-36
Identity = 59/78 (75.64%), Postives = 66/78 (84.62%), Query Frame = 1
Query:    1 EHCQKHDINIAQLALQFSVANEDMTTCITGSANPTRVRQWAEWIEQPLDEQLLKDVQEILASIHNWFYIEGRPGNNDP 234
            +HC+    +IAQLALQFSVAN DMTTC+TGSANP RVRQWAEWI +P+DE LL +VQEIL  IHNWFYIEGRP NNDP
Sbjct:  234 KHCEAAGGDIAQLALQFSVANPDMTTCVTGSANPDRVRQWAEWIGEPMDETLLAEVQEILKPIHNWFYIEGRPENNDP 311          
BLAST of mRNA_M-pyrifera_M_contig83085.19409.1 vs. uniprot
Match: UPI00029B2CC1 (aldo/keto reductase n=1 Tax=Schlesneria paludicola TaxID=360056 RepID=UPI00029B2CC1)

HSP 1 Score: 131 bits (329), Expect = 1.370e-35
Identity = 54/78 (69.23%), Postives = 66/78 (84.62%), Query Frame = 1
Query:    1 EHCQKHDINIAQLALQFSVANEDMTTCITGSANPTRVRQWAEWIEQPLDEQLLKDVQEILASIHNWFYIEGRPGNNDP 234
            +HC KH  ++A+LALQFS+AN DMTTC+TGSA P R+R+WA+W  +PLD+QLLKDVQ IL  IHNWFY+EGRP NNDP
Sbjct:  234 DHCAKHGSDLAKLALQFSIANPDMTTCVTGSARPERIREWAKWAAEPLDQQLLKDVQAILQPIHNWFYVEGRPENNDP 311          
BLAST of mRNA_M-pyrifera_M_contig83085.19409.1 vs. uniprot
Match: A0A7Z9GZ66_9PLAN (Aldo/keto reductase n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A7Z9GZ66_9PLAN)

HSP 1 Score: 129 bits (324), Expect = 7.590e-35
Identity = 57/79 (72.15%), Postives = 65/79 (82.28%), Query Frame = 1
Query:    1 EHCQKHDINIAQLALQFSVANEDMTTCITGSANPTRVRQWAEWIEQPLDEQLLKDVQEILASIHNWFYIEGRPGNNDPR 237
            +HCQ   ++IAQLA+QFSVAN DMTTCITGSANP RV QW +WIE+PLDE LL +VQ IL  IHNWFY EGRP NNDP+
Sbjct:  234 KHCQDQGVDIAQLAVQFSVANTDMTTCITGSANPKRVAQWVQWIEEPLDETLLAEVQTILQPIHNWFYHEGRPENNDPQ 312          
BLAST of mRNA_M-pyrifera_M_contig83085.19409.1 vs. uniprot
Match: A0A2E6MX45_9PLAN (Aldo/keto reductase n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A2E6MX45_9PLAN)

HSP 1 Score: 129 bits (323), Expect = 1.120e-34
Identity = 57/78 (73.08%), Postives = 65/78 (83.33%), Query Frame = 1
Query:    4 HCQKHDINIAQLALQFSVANEDMTTCITGSANPTRVRQWAEWIEQPLDEQLLKDVQEILASIHNWFYIEGRPGNNDPR 237
            HC    I+IAQLALQFS+ANE+M TCITGSAN  R+RQWAEW E P+DE L+ +VQEILA IHNWFYIEGRP NNDP+
Sbjct:  235 HCTAAGIDIAQLALQFSIANENMATCITGSANQNRIRQWAEWAELPIDETLVAEVQEILAPIHNWFYIEGRPENNDPQ 312          
BLAST of mRNA_M-pyrifera_M_contig83085.19409.1 vs. uniprot
Match: A0A3D4A379_9PLAN (Aldo/keto reductase n=2 Tax=Planctomycetia TaxID=203683 RepID=A0A3D4A379_9PLAN)

HSP 1 Score: 127 bits (320), Expect = 2.990e-34
Identity = 54/77 (70.13%), Postives = 66/77 (85.71%), Query Frame = 1
Query:    1 EHCQKHDINIAQLALQFSVANEDMTTCITGSANPTRVRQWAEWIEQPLDEQLLKDVQEILASIHNWFYIEGRPGNND 231
            +HC +  I+IAQLALQ+S+AN+DMTTC+TGSANP R+RQWA+WI +PLD QL+ +VQEIL  IHNWFYIEGR  NND
Sbjct:  234 DHCSQAGIDIAQLALQYSIANQDMTTCVTGSANPGRIRQWADWINEPLDTQLVSEVQEILKPIHNWFYIEGREENND 310          
BLAST of mRNA_M-pyrifera_M_contig83085.19409.1 vs. uniprot
Match: A0A3L7Q5M1_9BACT (Aldo/keto reductase n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A3L7Q5M1_9BACT)

HSP 1 Score: 127 bits (320), Expect = 3.120e-34
Identity = 53/78 (67.95%), Postives = 67/78 (85.90%), Query Frame = 1
Query:    1 EHCQKHDINIAQLALQFSVANEDMTTCITGSANPTRVRQWAEWIEQPLDEQLLKDVQEILASIHNWFYIEGRPGNNDP 234
            + C++H ++IAQLALQFSVA+ ++TTC+TGSANP R+RQWAEW++QPLD QL+ DVQ IL  IHNW+Y EGRP NNDP
Sbjct:  234 DFCRQHGVDIAQLALQFSVAHPEITTCVTGSANPHRIRQWAEWVQQPLDTQLVADVQAILKPIHNWYYTEGRPENNDP 311          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig83085.19409.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2E5K8V1_9PLAN1.480e-3878.48Aldo/keto reductase n=1 Tax=Planctomycetaceae bact... [more]
A0A3E0PTS2_9BACT8.770e-3773.42Aldo/keto reductase n=1 Tax=Planctomycetes bacteri... [more]
A0A836VT53_9PLAN1.140e-3671.43Aldo/keto reductase n=1 Tax=Planctomycetaceae bact... [more]
A0A517Z546_9PLAN6.590e-3674.03D-threo-aldose 1-dehydrogenase n=1 Tax=Maioricimon... [more]
A0A2E7CYB6_9PLAN9.700e-3675.64Aldo/keto reductase n=1 Tax=Planctomycetaceae bact... [more]
UPI00029B2CC11.370e-3569.23aldo/keto reductase n=1 Tax=Schlesneria paludicola... [more]
A0A7Z9GZ66_9PLAN7.590e-3572.15Aldo/keto reductase n=1 Tax=Planctomycetaceae bact... [more]
A0A2E6MX45_9PLAN1.120e-3473.08Aldo/keto reductase n=1 Tax=Planctomycetaceae bact... [more]
A0A3D4A379_9PLAN2.990e-3470.13Aldo/keto reductase n=2 Tax=Planctomycetia TaxID=2... [more]
A0A3L7Q5M1_9BACT3.120e-3467.95Aldo/keto reductase n=1 Tax=Planctomycetes bacteri... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig83085contigM-pyrifera_M_contig83085:3..245 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score130.2
Seed ortholog evalue4.4e-28
Seed eggNOG ortholog1123242.JH636434_gene5408
Preferred namefdh
KEGG rclassRC00161
KEGG koko:K17744
KEGG ReactionR07675
KEGG Pathwayko00053,ko01100,ko01110,map00053,map01100,map01110
KEGG ModuleM00114
Hectar predicted targeting categoryother localisation
EggNOG free text desc.aldo keto reductase
EggNOG OGs2IX9J@203682,COG0667@1,COG0667@2
EC1.1.1.316
COG Functional cat.C
Best tax levelPlanctomycetes
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000
Exons1
Model size243
Cds size243
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816737.8390362-CDS-M-pyrifera_M_contig83085:2..2451622816737.8390362-CDS-M-pyrifera_M_contig83085:2..245Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig83085 3..245 +
1692278149.0286622-CDS-M-pyrifera_M_contig83085:2..2451692278149.0286622-CDS-M-pyrifera_M_contig83085:2..245Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig83085 3..245 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig83085.19409.1prot_M-pyrifera_M_contig83085.19409.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig83085 3..245 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig83085.19409.1

>prot_M-pyrifera_M_contig83085.19409.1 ID=prot_M-pyrifera_M_contig83085.19409.1|Name=mRNA_M-pyrifera_M_contig83085.19409.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=81bp
EHCQKHDINIAQLALQFSVANEDMTTCITGSANPTRVRQWAEWIEQPLDE
QLLKDVQEILASIHNWFYIEGRPGNNDPRG*
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mRNA from alignment at M-pyrifera_M_contig83085:3..245+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig83085.19409.1 ID=mRNA_M-pyrifera_M_contig83085.19409.1|Name=mRNA_M-pyrifera_M_contig83085.19409.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=243bp|location=Sequence derived from alignment at M-pyrifera_M_contig83085:3..245+ (Macrocystis pyrifera P11B4 male)
GAGCACTGCCAGAAGCACGACATCAACATCGCTCAACTCGCCCTCCAGTT CTCAGTCGCCAACGAAGACATGACCACGTGCATCACTGGCAGCGCTAACC CGACCCGCGTTCGTCAATGGGCCGAGTGGATCGAACAACCCCTCGACGAG CAGTTGCTCAAAGACGTCCAGGAGATCCTCGCCTCGATCCACAACTGGTT TTACATCGAGGGCCGACCTGGGAATAATGATCCCCGTGGCTAG
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig83085:3..245+

>mRNA_M-pyrifera_M_contig83085.19409.1 ID=mRNA_M-pyrifera_M_contig83085.19409.1|Name=mRNA_M-pyrifera_M_contig83085.19409.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=486bp|location=Sequence derived from alignment at M-pyrifera_M_contig83085:3..245+ (Macrocystis pyrifera P11B4 male)
GAGCACTGCCAGAAGCACGACATCAACATCGCTCAACTCGCCCTCCAGTT
CTCAGTCGCCAACGAAGACATGACCACGTGCATCACTGGCAGCGCTAACC
CGACCCGCGTTCGTCAATGGGCCGAGTGGATCGAACAACCCCTCGACGAG
CAGTTGCTCAAAGACGTCCAGGAGATCCTCGCCTCGATCCACAACTGGTT
TTACATCGAGGGCCGACCTGGGAATAATGATCCCCGTGGCTAGGAGCACT
GCCAGAAGCACGACATCAACATCGCTCAACTCGCCCTCCAGTTCTCAGTC
GCCAACGAAGACATGACCACGTGCATCACTGGCAGCGCTAACCCGACCCG
CGTTCGTCAATGGGCCGAGTGGATCGAACAACCCCTCGACGAGCAGTTGC
TCAAAGACGTCCAGGAGATCCTCGCCTCGATCCACAACTGGTTTTACATC
GAGGGCCGACCTGGGAATAATGATCCCCGTGGCTAG
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