mRNA_M-pyrifera_M_contig82877.19365.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig82877.19365.1
Unique NamemRNA_M-pyrifera_M_contig82877.19365.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig82877.19365.1 vs. uniprot
Match: A0A349B0P6_9ACTN (Glyoxalase/bleomycin resistance/extradiol dioxygenase family protein n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A349B0P6_9ACTN)

HSP 1 Score: 164 bits (414), Expect = 3.630e-50
Identity = 77/101 (76.24%), Postives = 84/101 (83.17%), Query Frame = 1
Query:    1 IEQPPLKLVLFENAAG--GGTLNHLGVEVESADQVTAAEARLSDDGLETTGIDDTVCCYAEKTETWVMGPDDTRWEWYVKNGDAEQLENEVVTSGGPACCG 297
            I  PPLKLVLFE AAG  GGT+NHLGVE +SA +V AAEARL+DDGLETTGIDDT+CCYA K ETWV  PD  RWEWYVK GD EQ+ NEVVT+GGPACCG
Sbjct:   40 IADPPLKLVLFEVAAGALGGTINHLGVETDSAAEVEAAEARLADDGLETTGIDDTICCYASKVETWVTDPDGARWEWYVKTGDTEQMANEVVTAGGPACCG 140          
BLAST of mRNA_M-pyrifera_M_contig82877.19365.1 vs. uniprot
Match: A0A7W1R647_9ACTN (VOC family protein n=1 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A7W1R647_9ACTN)

HSP 1 Score: 154 bits (388), Expect = 3.410e-46
Identity = 71/101 (70.30%), Postives = 84/101 (83.17%), Query Frame = 1
Query:    1 IEQPPLKLVLFENAAGGGTLNHLGVEVESADQVTAAEARLSDDGLETTGIDDTVCCYAEKTETWVMGPDDTRWEWYVKNGDAEQLENEVVTSG---GPACC 294
            IEQPPLKLVLFE+ A  G++NHLGVE +S  +VTAAE+RL+D GL+TTG+DDTVCCYAEKTETWV GPD TRWEWYVK+GDAEQ +NE++ S    G  CC
Sbjct:   39 IEQPPLKLVLFESDATPGSINHLGVETDSTAEVTAAESRLADSGLDTTGVDDTVCCYAEKTETWVSGPDGTRWEWYVKHGDAEQADNEILASHAATGATCC 139          
BLAST of mRNA_M-pyrifera_M_contig82877.19365.1 vs. uniprot
Match: A0A7Y2DMG2_9ACTN (Glyoxalase/bleomycin resistance/extradiol dioxygenase family protein n=1 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A7Y2DMG2_9ACTN)

HSP 1 Score: 151 bits (381), Expect = 3.390e-45
Identity = 69/98 (70.41%), Postives = 80/98 (81.63%), Query Frame = 1
Query:    1 IEQPPLKLVLFENAAGGGTLNHLGVEVESADQVTAAEARLSDDGLETTGIDDTVCCYAEKTETWVMGPDDTRWEWYVKNGDAEQLENEVVTSGGPACC 294
            +  PPLKLVLFE+   GGTLNHLGVEVE A+QV AAE R+++ GL+TTG+DDT+CCYA KTETWV GPD TRWEWYVKN DAEQ EN V++SG   CC
Sbjct:   39 VANPPLKLVLFESPGAGGTLNHLGVEVEQAEQVEAAERRIAESGLDTTGVDDTLCCYAAKTETWVHGPD-TRWEWYVKNADAEQFENVVLSSGESTCC 135          
BLAST of mRNA_M-pyrifera_M_contig82877.19365.1 vs. uniprot
Match: A0A7W1USW3_9ACTN (VOC family protein n=2 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A7W1USW3_9ACTN)

HSP 1 Score: 151 bits (381), Expect = 3.500e-45
Identity = 69/97 (71.13%), Postives = 76/97 (78.35%), Query Frame = 1
Query:    1 IEQPPLKLVLFENAAGGGTLNHLGVEVESADQVTAAEARLSDDGLETTGIDDTVCCYAEKTETWVMGPDDTRWEWYVKNGDAEQLENEVVTSGGPAC 291
            I+ PPLKLVLFENA   G++NHLGVE E+AD+V AAEARL   GLETTG+DDTVCCYAEKTETWV GPD  RWEWYVK GD EQ  N V+  GG  C
Sbjct:   39 IDDPPLKLVLFENAGEPGSINHLGVETETADEVVAAEARLERAGLETTGVDDTVCCYAEKTETWVAGPDGARWEWYVKQGDTEQFANAVIGDGGTCC 135          
BLAST of mRNA_M-pyrifera_M_contig82877.19365.1 vs. uniprot
Match: UPI00034BC15E (VOC family protein n=1 Tax=Ilumatobacter nonamiensis TaxID=467093 RepID=UPI00034BC15E)

HSP 1 Score: 148 bits (374), Expect = 4.610e-44
Identity = 74/102 (72.55%), Postives = 79/102 (77.45%), Query Frame = 1
Query:    1 IEQPPLKLVLFENA-AGGGT----LNHLGVEVESADQVTAAEARLSDDGLETTGIDDTVCCYAEKTETWVMGPDDTRWEWYVKNGDAEQLENEVVTSGGPAC 291
            I  PPLKLVLFENA AG G     LNHLGVE E A QV AAEAR+S  GLETTGIDDT+CC+AEK ETWV  PDD RWEWYVK GDAEQLENE+VT+G   C
Sbjct:   39 IVDPPLKLVLFENADAGAGADFLHLNHLGVETEEAAQVVAAEARISGAGLETTGIDDTICCFAEKVETWVKSPDDARWEWYVKTGDAEQLENEIVTAGTTCC 140          
BLAST of mRNA_M-pyrifera_M_contig82877.19365.1 vs. uniprot
Match: A0A7Y2N852_9ACTN (Glyoxalase/bleomycin resistance/extradiol dioxygenase family protein n=1 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A7Y2N852_9ACTN)

HSP 1 Score: 147 bits (370), Expect = 1.650e-43
Identity = 70/98 (71.43%), Postives = 79/98 (80.61%), Query Frame = 1
Query:    1 IEQPPLKLVLFENAAGGGTLNHLGVEVESADQVTAAEARLSDDGLETTGIDDTVCCYAEKTETWVMGPDDTRWEWYVKNGDAEQLENEVVTSGGPACC 294
            +  PPLKLVLFE A  GGTLNHLGVEVE A+QVTAAE R++  GLETTG+DDT+CC+A KTETWV GPD+ +WEWYVK GDAEQLENEVV     A C
Sbjct:   39 VANPPLKLVLFETADAGGTLNHLGVEVEQAEQVTAAEQRIATAGLETTGVDDTICCFAHKTETWVEGPDN-KWEWYVKTGDAEQLENEVVAKVDVAGC 135          
BLAST of mRNA_M-pyrifera_M_contig82877.19365.1 vs. uniprot
Match: A0A382HE71_9ZZZZ (VOC domain-containing protein n=1 Tax=marine metagenome TaxID=408172 RepID=A0A382HE71_9ZZZZ)

HSP 1 Score: 145 bits (365), Expect = 9.840e-43
Identity = 64/98 (65.31%), Postives = 79/98 (80.61%), Query Frame = 1
Query:    1 IEQPPLKLVLFENAAGGGTLNHLGVEVESADQVTAAEARLSDDGLETTGIDDTVCCYAEKTETWVMGPDDTRWEWYVKNGDAEQLENEVVTSGGPACC 294
            I  PPLKLVLFE+  GGGT+NHLGVE E+ ++V AAEARL++  L+TTG++DT+CCYAEKTETWV+GPD  RWE+YVK+GD+EQ EN VV      CC
Sbjct:   40 ISDPPLKLVLFEDTEGGGTINHLGVEAETTEEVVAAEARLTESDLDTTGVEDTMCCYAEKTETWVIGPDGVRWEFYVKHGDSEQFENLVVADSTSDCC 137          
BLAST of mRNA_M-pyrifera_M_contig82877.19365.1 vs. uniprot
Match: A0A2D6KIN4_9ACTN (Glyoxalase/bleomycin resistance/extradiol dioxygenase family protein n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A2D6KIN4_9ACTN)

HSP 1 Score: 144 bits (363), Expect = 2.040e-42
Identity = 67/99 (67.68%), Postives = 77/99 (77.78%), Query Frame = 1
Query:    1 IEQPPLKLVLFENAAGGGTLNHLGVEVESADQVTAAEARLSDDGLETTGIDDTVCCYAEKTETWVMGPDDTRWEWYVKNGDAEQLEN-EVVTSGGPACC 294
            I  PPLKLVLFE+ +GGGTLNHLGVE E+  +V AAEARLS  GLETTG+ D +CCYA+KTETW+ GPDDTRWEWYVK GD EQ EN +V      +CC
Sbjct:   40 IADPPLKLVLFEDTSGGGTLNHLGVETETGAEVVAAEARLSAAGLETTGVGDAMCCYADKTETWLSGPDDTRWEWYVKTGDNEQFENIDVDMDASTSCC 138          
BLAST of mRNA_M-pyrifera_M_contig82877.19365.1 vs. uniprot
Match: A0A351ERU3_9ACTN (Glyoxalase/bleomycin resistance/extradiol dioxygenase family protein n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A351ERU3_9ACTN)

HSP 1 Score: 144 bits (364), Expect = 2.570e-42
Identity = 66/98 (67.35%), Postives = 79/98 (80.61%), Query Frame = 1
Query:    1 IEQPPLKLVLFENAAGGGTLNHLGVEVESADQVTAAEARLSDDGLETTGIDDTVCCYAEKTETWVMGPDDTRWEWYVKNGDAEQLENEVVTSGGPACC 294
            I  PPLKLVLFE    G T+NHLGVEV ++D+V AAE RL   GLETTGIDDTVCCYAEKTETW+ GPD+TRWEWYV+ GD+EQ++NE++ + GP  C
Sbjct:   46 IANPPLKLVLFEGTEDG-TINHLGVEVTTSDEVIAAEQRLIQAGLETTGIDDTVCCYAEKTETWLHGPDNTRWEWYVRTGDSEQMQNEIIGTDGPTIC 142          
BLAST of mRNA_M-pyrifera_M_contig82877.19365.1 vs. uniprot
Match: A0A2E4GPP4_9ACTN (Glyoxalase/bleomycin resistance/extradiol dioxygenase family protein n=4 Tax=Acidimicrobiales TaxID=84993 RepID=A0A2E4GPP4_9ACTN)

HSP 1 Score: 143 bits (361), Expect = 4.000e-42
Identity = 64/97 (65.98%), Postives = 78/97 (80.41%), Query Frame = 1
Query:    1 IEQPPLKLVLFENAAGGGTLNHLGVEVESADQVTAAEARLSDDGLETTGIDDTVCCYAEKTETWVMGPDDTRWEWYVKNGDAEQLENEVVTSGGPAC 291
            IE+PPLKLVLFE+   GG++NHLGVEV+    V  A+AR++D+GL TTGID+T+CCYA+KTETW+ GPDD RWEWYVK GD EQLEN VV+S    C
Sbjct:   40 IEEPPLKLVLFEDIXNGGSINHLGVEVDDVKMVHEADARMTDEGLTTTGIDETMCCYADKTETWIDGPDDIRWEWYVKRGDNEQLENVVVSSEANCC 136          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig82877.19365.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A349B0P6_9ACTN3.630e-5076.24Glyoxalase/bleomycin resistance/extradiol dioxygen... [more]
A0A7W1R647_9ACTN3.410e-4670.30VOC family protein n=1 Tax=Acidimicrobiia bacteriu... [more]
A0A7Y2DMG2_9ACTN3.390e-4570.41Glyoxalase/bleomycin resistance/extradiol dioxygen... [more]
A0A7W1USW3_9ACTN3.500e-4571.13VOC family protein n=2 Tax=Acidimicrobiia bacteriu... [more]
UPI00034BC15E4.610e-4472.55VOC family protein n=1 Tax=Ilumatobacter nonamiens... [more]
A0A7Y2N852_9ACTN1.650e-4371.43Glyoxalase/bleomycin resistance/extradiol dioxygen... [more]
A0A382HE71_9ZZZZ9.840e-4365.31VOC domain-containing protein n=1 Tax=marine metag... [more]
A0A2D6KIN4_9ACTN2.040e-4267.68Glyoxalase/bleomycin resistance/extradiol dioxygen... [more]
A0A351ERU3_9ACTN2.570e-4267.35Glyoxalase/bleomycin resistance/extradiol dioxygen... [more]
A0A2E4GPP4_9ACTN4.000e-4265.98Glyoxalase/bleomycin resistance/extradiol dioxygen... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig82877contigM-pyrifera_M_contig82877:3..302 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score132.5
Seed ortholog evalue1.1e-28
Seed eggNOG ortholog1229780.BN381_130095
Preferred namecadI
KEGG rclassRC00004,RC00740
KEGG koko:K01759
KEGG ReactionR02530
KEGG Pathwayko00620,map00620
Hectar predicted targeting categoryother localisation
GOsGO:0008150,GO:0010035,GO:0010038,GO:0042221,GO:0046686,GO:0050896
EggNOG free text desc.glyoxalase bleomycin resistance protein dioxygenase
EggNOG OGs2IFUM@201174,COG0346@1,COG0346@2
EC4.4.1.5
COG Functional cat.E
Best tax levelActinobacteria
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000
Exons1
Model size300
Cds size300
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816735.635783-CDS-M-pyrifera_M_contig82877:2..3021622816735.635783-CDS-M-pyrifera_M_contig82877:2..302Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig82877 3..302 +
1692278147.6919718-CDS-M-pyrifera_M_contig82877:2..3021692278147.6919718-CDS-M-pyrifera_M_contig82877:2..302Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig82877 3..302 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig82877.19365.1prot_M-pyrifera_M_contig82877.19365.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig82877 3..302 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig82877.19365.1

>prot_M-pyrifera_M_contig82877.19365.1 ID=prot_M-pyrifera_M_contig82877.19365.1|Name=mRNA_M-pyrifera_M_contig82877.19365.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=100bp
IEQPPLKLVLFENAAGGGTLNHLGVEVESADQVTAAEARLSDDGLETTGI
DDTVCCYAEKTETWVMGPDDTRWEWYVKNGDAEQLENEVVTSGGPACCG*
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mRNA from alignment at M-pyrifera_M_contig82877:3..302+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig82877.19365.1 ID=mRNA_M-pyrifera_M_contig82877.19365.1|Name=mRNA_M-pyrifera_M_contig82877.19365.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=300bp|location=Sequence derived from alignment at M-pyrifera_M_contig82877:3..302+ (Macrocystis pyrifera P11B4 male)
ATCGAGCAGCCCCCGCTCAAGCTGGTGCTCTTCGAGAACGCGGCCGGTGG CGGCACGCTCAACCATCTCGGTGTCGAGGTCGAGTCGGCCGATCAGGTCA CCGCGGCCGAAGCCCGTCTCTCAGACGACGGTCTCGAGACCACCGGTATC GACGACACCGTCTGCTGCTACGCCGAGAAGACCGAGACCTGGGTGATGGG TCCCGACGACACCCGCTGGGAGTGGTACGTCAAGAACGGCGACGCCGAGC AGCTCGAGAACGAGGTCGTCACCAGCGGTGGGCCCGCCTGCTGCGGCTGA
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig82877:3..302+

>mRNA_M-pyrifera_M_contig82877.19365.1 ID=mRNA_M-pyrifera_M_contig82877.19365.1|Name=mRNA_M-pyrifera_M_contig82877.19365.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=600bp|location=Sequence derived from alignment at M-pyrifera_M_contig82877:3..302+ (Macrocystis pyrifera P11B4 male)
ATCGAGCAGCCCCCGCTCAAGCTGGTGCTCTTCGAGAACGCGGCCGGTGG
CGGCACGCTCAACCATCTCGGTGTCGAGGTCGAGTCGGCCGATCAGGTCA
CCGCGGCCGAAGCCCGTCTCTCAGACGACGGTCTCGAGACCACCGGTATC
GACGACACCGTCTGCTGCTACGCCGAGAAGACCGAGACCTGGGTGATGGG
TCCCGACGACACCCGCTGGGAGTGGTACGTCAAGAACGGCGACGCCGAGC
AGCTCGAGAACGAGGTCGTCACCAGCGGTGGGCCCGCCTGCTGCGGCTGA
ATCGAGCAGCCCCCGCTCAAGCTGGTGCTCTTCGAGAACGCGGCCGGTGG
CGGCACGCTCAACCATCTCGGTGTCGAGGTCGAGTCGGCCGATCAGGTCA
CCGCGGCCGAAGCCCGTCTCTCAGACGACGGTCTCGAGACCACCGGTATC
GACGACACCGTCTGCTGCTACGCCGAGAAGACCGAGACCTGGGTGATGGG
TCCCGACGACACCCGCTGGGAGTGGTACGTCAAGAACGGCGACGCCGAGC
AGCTCGAGAACGAGGTCGTCACCAGCGGTGGGCCCGCCTGCTGCGGCTGA
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