mRNA_M-pyrifera_M_contig82267.19242.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig82267.19242.1 vs. uniprot
Match: A0A6H5KR59_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KR59_9PHAE) HSP 1 Score: 261 bits (668), Expect = 6.980e-83 Identity = 122/210 (58.10%), Postives = 160/210 (76.19%), Query Frame = 1 Query: 4 AFPPEFWQLFLQSNLTALGGKCRPVCVGMTWRRLLAAGTMRQWRPRLEEINREARQFGVGVRGGVEQVALRARVHHEARNWLILTDCSNAFNTVKRTAVLAEAATCVPALTPFIAKCYGERPARTFFQMDSGERRKIDCSSGVQQGDAMGPALFCMTLLPILKRVREEFEPRGVEAFAYLDDISIGISEITPDTVRVVPFLQHELCEIGV 633 AFPPEFW L+ QS+L ALG KCRPVC+GMTWRRL+AAGT+R+W+P+LEEI REA QFGV V GGVEQVA+ A++ H+ +W++ TDCSNAFNT KRTA++A+AA VP L +IA+CY E PA+ + MDSG RR I+C GVQQGD MGP LFC L+PI+ ++R +++ GV AY+DDIS+ IT + ++V+P L EL +G+ Sbjct: 148 AFPPEFWTLWKQSSLIALGEKCRPVCIGMTWRRLIAAGTVREWKPKLEEIFREADQFGVAVAGGVEQVAMDAQLVHQTGHWVVQTDCSNAFNTGKRTAIMAQAAKSVPDLVGYIARCYDEIPAKAIYTMDSGARRTIECKGGVQQGDGMGPPLFCFILVPIILKLRAKYDHLGVCLKAYMDDISLHFKNITAENIQVIPDLVDELEAVGI 357
BLAST of mRNA_M-pyrifera_M_contig82267.19242.1 vs. uniprot
Match: A0A6H5L4Y4_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4Y4_9PHAE) HSP 1 Score: 254 bits (648), Expect = 3.220e-82 Identity = 117/196 (59.69%), Postives = 153/196 (78.06%), Query Frame = 1 Query: 4 AFPPEFWQLFLQSNLTALGGKCRPVCVGMTWRRLLAAGTMRQWRPRLEEINREARQFGVGVRGGVEQVALRARVHHEARNWLILTDCSNAFNTVKRTAVLAEAATCVPALTPFIAKCYGERPARTFFQMDSGERRKIDCSSGVQQGDAMGPALFCMTLLPILKRVREEFEPRGVEAFAYLDDISIGISEITPDTVR 591 AFPPEFW L+ +S+L ALG KCRPVC+GMTWRRL+AAGT+R+W+P+LEEI REA QFGV V GGVEQVA+ A++ H+ +W++ TDCSNAFNT KRTA++A+AA VP L +IA+CY E PA+ + MDSGERR I+C SGVQQGD MGP LFC L+PI+ ++R +++ GV AY+DDIS+ IT + ++ Sbjct: 58 AFPPEFWTLWKRSSLIALGEKCRPVCIGMTWRRLIAAGTVREWKPKLEEIFREADQFGVAVAGGVEQVAMDAQLVHQTGHWVVQTDCSNAFNTGKRTAIMAQAAKSVPDLVGYIARCYDEIPAKAIYTMDSGERRTIECKSGVQQGDGMGPPLFCFILVPIVLKLRAKYDHLGVSLKAYMDDISLHFKNITAENIQ 253
BLAST of mRNA_M-pyrifera_M_contig82267.19242.1 vs. uniprot
Match: A0A6H5KDD0_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDD0_9PHAE) HSP 1 Score: 259 bits (661), Expect = 1.710e-81 Identity = 122/210 (58.10%), Postives = 160/210 (76.19%), Query Frame = 1 Query: 4 AFPPEFWQLFLQSNLTALGGKCRPVCVGMTWRRLLAAGTMRQWRPRLEEINREARQFGVGVRGGVEQVALRARVHHEARNWLILTDCSNAFNTVKRTAVLAEAATCVPALTPFIAKCYGERPARTFFQMDSGERRKIDCSSGVQQGDAMGPALFCMTLLPILKRVREEFEPRGVEAFAYLDDISIGISEITPDTVRVVPFLQHELCEIGV 633 AFPPEFW L+ QS+L ALG KCRPVC+GMTWRRL+AAGT+R+W+P+LEEI REA QFGV V GGVEQVA+ A++ H+ +W++ TDCSNAFNT KRTA++A+AA VP L +IA+CY E A++ + MDSGERR I+C SGVQQGD MGP LF L PI+ ++R +++ GV AY+DDIS+ IT + ++V+P L EL +G+ Sbjct: 14 AFPPEFWTLWKQSSLIALGEKCRPVCIGMTWRRLIAAGTVREWKPKLEEIFREADQFGVAVAGGVEQVAMDAQLVHQTGHWVVQTDCSNAFNTGKRTAIMAKAAKSVPNLVGYIARCYDEISAKSIYAMDSGERRTIECKSGVQQGDGMGPPLFFFILFPIVLKLRAKYDHLGVSLKAYMDDISLHFKNITAENIQVIPDLVDELEAVGI 223
BLAST of mRNA_M-pyrifera_M_contig82267.19242.1 vs. uniprot
Match: A0A6H5LL14_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LL14_9PHAE) HSP 1 Score: 264 bits (675), Expect = 2.040e-81 Identity = 125/211 (59.24%), Postives = 163/211 (77.25%), Query Frame = 1 Query: 4 AFPPEFWQLFLQSNLTALGGKCRPVCVGMTWRRLLAAGTMRQWRPRLEEINREARQFGVGVRGGVEQVALRARVHHEARNWLILTDCSNAFNTVKRTAVLAEAATCVPALTPFIAKCYGERPARTFFQMDSGERRKIDCSSGVQQGDAMGPALFCMTLLPILKRVREEFEPRGVEAFAYLDDI-SIGISEITPDTVRVVPFLQHELCEIGV 633 AFPPEFW L+ QS+L ALG KCRPVC+GMTWRRL+AAGT+R+W+P+LEEI REA QFGV V GGVEQVA+ A++ H+ +W++ TDCSNAFNT KRTA++A+AA VP L +IA+CY E PA+ + MDSGERR I+C SGVQQGD MGP LFC TL+PI+ ++R +++ GV AY+DDI S+ IT + ++V+P L EL +G+ Sbjct: 57 AFPPEFWTLWKQSSLIALGEKCRPVCIGMTWRRLIAAGTVREWKPKLEEIFREADQFGVAVAGGVEQVAMDAQLVHQTGHWVVQTDCSNAFNTGKRTAIMAQAAKSVPDLVGYIARCYDEIPAKAIYTMDSGERRTIECKSGVQQGDGMGPPLFCFTLVPIVLKLRAKYDNLGVRLKAYMDDIISLHFKNITAENIQVIPDLVDELEAVGI 267
BLAST of mRNA_M-pyrifera_M_contig82267.19242.1 vs. uniprot
Match: A0A6H5KT19_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KT19_9PHAE) HSP 1 Score: 254 bits (648), Expect = 3.490e-81 Identity = 121/210 (57.62%), Postives = 159/210 (75.71%), Query Frame = 1 Query: 4 AFPPEFWQLFLQSNLTALGGKCRPVCVGMTWRRLLAAGTMRQWRPRLEEINREARQFGVGVRGGVEQVALRARVHHEARNWLILTDCSNAFNTVKRTAVLAEAATCVPALTPFIAKCYGERPARTFFQMDSGERRKIDCSSGVQQGDAMGPALFCMTLLPILKRVREEFEPRGVEAFAYLDDISIGISEITPDTVRVVPFLQHELCEIGV 633 AFPPEFW L+ QS+L ALG KCRPVC+GMTWRRL+AAGT+R+W+P+LEEI REA QFGV V GGVEQVA+ A++ + +W++ TDCSN NT KRTA++A+AA VP L IA+CY E PA+ + MDSGERR I+C SGVQQGD MGP LFC L+PI+ ++R +++ GV AY+DDIS+ IT ++++V+P L EL +G+ Sbjct: 103 AFPPEFWTLWKQSSLIALGEKCRPVCIGMTWRRLIAAGTVREWKPKLEEIFREADQFGVAVTGGVEQVAMDAQLVDQTGHWVVQTDCSNGLNTGKRTAIMAQAAKSVPDLVGCIARCY-ELPAKAIYAMDSGERRTIECKSGVQQGDGMGPPLFCFILVPIVLKLRAKYDHLGVSLKAYMDDISLHFKNITAESIQVIPDLVDELEAVGI 311
BLAST of mRNA_M-pyrifera_M_contig82267.19242.1 vs. uniprot
Match: A0A6H5KKQ2_9PHAE (Reverse transcriptase domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKQ2_9PHAE) HSP 1 Score: 263 bits (672), Expect = 4.760e-80 Identity = 123/210 (58.57%), Postives = 161/210 (76.67%), Query Frame = 1 Query: 4 AFPPEFWQLFLQSNLTALGGKCRPVCVGMTWRRLLAAGTMRQWRPRLEEINREARQFGVGVRGGVEQVALRARVHHEARNWLILTDCSNAFNTVKRTAVLAEAATCVPALTPFIAKCYGERPARTFFQMDSGERRKIDCSSGVQQGDAMGPALFCMTLLPILKRVREEFEPRGVEAFAYLDDISIGISEITPDTVRVVPFLQHELCEIGV 633 AFPPEFW L QS+L ALG KCRPVC+GMTWRRL+AAGT+R+W+P+LEEI REA QFGV V GGVEQVA+ A++ H+ +W++ TDCSNAFNT KRTA++A+A+ VP L +IA+CY E PA+ + MDSGERR I+C SGVQQGD MGP LFC L+PI+ ++R +++ GV AY+DDIS+ +IT + ++V P L EL +G+ Sbjct: 425 AFPPEFWTLLKQSSLIALGEKCRPVCIGMTWRRLIAAGTVREWKPKLEEIFREADQFGVAVAGGVEQVAIDAQLVHQTGHWVVQTDCSNAFNTGKRTAIMAQASKSVPDLVGYIARCYDEIPAKAIYTMDSGERRTIECKSGVQQGDGMGPPLFCFILVPIVLKLRAKYDHLGVCLKAYMDDISLHFKDITAENIQVTPDLVDELEAVGI 634
BLAST of mRNA_M-pyrifera_M_contig82267.19242.1 vs. uniprot
Match: A0A6H5JI32_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JI32_9PHAE) HSP 1 Score: 265 bits (677), Expect = 4.870e-80 Identity = 124/210 (59.05%), Postives = 162/210 (77.14%), Query Frame = 1 Query: 4 AFPPEFWQLFLQSNLTALGGKCRPVCVGMTWRRLLAAGTMRQWRPRLEEINREARQFGVGVRGGVEQVALRARVHHEARNWLILTDCSNAFNTVKRTAVLAEAATCVPALTPFIAKCYGERPARTFFQMDSGERRKIDCSSGVQQGDAMGPALFCMTLLPILKRVREEFEPRGVEAFAYLDDISIGISEITPDTVRVVPFLQHELCEIGV 633 AFPPEFW L+ QS+L ALG KCRPVC+GMTWRRL+AAGT+R+W+P+LEEI REA QFGV V GGVEQVA+ A++ H+ +W++ TDCSNAFNT KRTA++A+AA VP L +IA+CY E PA+ + MDSGERR I+C SGVQQGD MGP LFC L+PI+ ++R +++ GV AY+DDIS+ IT + ++V+P L EL +G+ Sbjct: 447 AFPPEFWTLWKQSSLIALGEKCRPVCIGMTWRRLIAAGTVREWKPKLEEIFREADQFGVAVAGGVEQVAMDAQLVHQTGHWVVQTDCSNAFNTGKRTAIMAQAAKSVPDLVGYIARCYDEIPAKAIYTMDSGERRTIECKSGVQQGDGMGPPLFCFILVPIVLKLRAKYDHLGVCLKAYMDDISLHFKNITAENIQVIPDLVDELEAVGI 656
BLAST of mRNA_M-pyrifera_M_contig82267.19242.1 vs. uniprot
Match: A0A6H5K0V7_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0V7_9PHAE) HSP 1 Score: 254 bits (649), Expect = 2.890e-79 Identity = 118/208 (56.73%), Postives = 159/208 (76.44%), Query Frame = 1 Query: 10 PPEFWQLFLQSNLTALGGKCRPVCVGMTWRRLLAAGTMRQWRPRLEEINREARQFGVGVRGGVEQVALRARVHHEARNWLILTDCSNAFNTVKRTAVLAEAATCVPALTPFIAKCYGERPARTFFQMDSGERRKIDCSSGVQQGDAMGPALFCMTLLPILKRVREEFEPRGVEAFAYLDDISIGISEITPDTVRVVPFLQHELCEIGV 633 PPEFW L+ QS+L ALG KCRPVC+GMTWRRL+AAGT+R+W+P+LEEI REA QFGV V GGVEQVA+ A++ H+ +W++ TDCS+AFNT KRT ++A+AA VP + +IA+CY E PA+ + MDSGERR I+C SGVQQGD MGP LFC L+PI+ ++R ++ GV AY+DDIS+ + IT + ++++P L EL +G+ Sbjct: 52 PPEFWTLWKQSSLIALGEKCRPVCIGMTWRRLIAAGTVREWKPKLEEIFREADQFGVAVAGGVEQVAMDAQLVHQTGHWVVQTDCSDAFNTGKRTVIMAQAAKSVPDVLGYIARCYDEIPAKAIYTMDSGERRTIECKSGVQQGDGMGPPLFCFILVPIVLKLRAMYDHLGVCLKAYMDDISLHFNNITAENIQLIPDLVDELEAVGI 259
BLAST of mRNA_M-pyrifera_M_contig82267.19242.1 vs. uniprot
Match: A0A6H5KMQ2_9PHAE (Reverse transcriptase domain-containing protein n=16 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMQ2_9PHAE) HSP 1 Score: 265 bits (677), Expect = 1.340e-78 Identity = 124/210 (59.05%), Postives = 162/210 (77.14%), Query Frame = 1 Query: 4 AFPPEFWQLFLQSNLTALGGKCRPVCVGMTWRRLLAAGTMRQWRPRLEEINREARQFGVGVRGGVEQVALRARVHHEARNWLILTDCSNAFNTVKRTAVLAEAATCVPALTPFIAKCYGERPARTFFQMDSGERRKIDCSSGVQQGDAMGPALFCMTLLPILKRVREEFEPRGVEAFAYLDDISIGISEITPDTVRVVPFLQHELCEIGV 633 AFPPEFW L+ QS+L ALG KCRPVC+GMTWRRL+AAGT+R+W+P+LEEI REA QFGV V GGVEQVA+ A++ H+ +W++ TDCSNAFNT KRTA++A+AA VP L +IA+CY E PA+ + MDSGERR I+C SGVQQGD MGP LFC L+PI+ ++R +++ GV AY+DDIS+ IT + ++V+P L EL +G+ Sbjct: 426 AFPPEFWTLWKQSSLIALGEKCRPVCIGMTWRRLIAAGTVREWKPKLEEIFREADQFGVAVAGGVEQVAMDAQLVHQTGHWVVQTDCSNAFNTGKRTAIMAQAAKSVPDLVGYIARCYDEIPAKAIYAMDSGERRTIECKSGVQQGDGMGPPLFCFILVPIVLKLRAKYDHLGVCLKAYMDDISLHFKNITAENIQVIPDLVDELEAVGI 635
BLAST of mRNA_M-pyrifera_M_contig82267.19242.1 vs. uniprot
Match: A0A6H5JH58_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JH58_9PHAE) HSP 1 Score: 264 bits (675), Expect = 5.190e-78 Identity = 119/209 (56.94%), Postives = 166/209 (79.43%), Query Frame = 1 Query: 7 FPPEFWQLFLQSNLTALGGKCRPVCVGMTWRRLLAAGTMRQWRPRLEEINREARQFGVGVRGGVEQVALRARVHHEARNWLILTDCSNAFNTVKRTAVLAEAATCVPALTPFIAKCYGERPARTFFQMDSGERRKIDCSSGVQQGDAMGPALFCMTLLPILKRVREEFEPRGVEAFAYLDDISIGISEITPDTVRVVPFLQHELCEIGV 633 FPPEFW L+ QS+L ALG KCRPVC+GMTWRRL+AAGT+RQW+P+LEE+ REA QFGV V GGVE+VA+ A++ H+ NW+I TDCSNAFNT KRTA++A+AA +P L +IA+CY E PA ++MDSGERR ++C+SGVQQGD MGP LF + L+PI+ +++++++P GV AY+DDI++ + ++T ++V+ + L EL E+G+ Sbjct: 597 FPPEFWTLWKQSSLIALGEKCRPVCIGMTWRRLIAAGTVRQWKPKLEEMFREANQFGVAVAGGVERVAMEAQLVHQTGNWIIQTDCSNAFNTGKRTAIMAQAAKSLPDLVGYIARCYDEIPATAVYEMDSGERRTLECTSGVQQGDGMGPPLFSLILIPIILKLQDKYKPLGVAFKAYMDDITLHLKDLTEESVQAMTDLVDELAEVGI 805 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig82267.19242.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig82267.19242.1 >prot_M-pyrifera_M_contig82267.19242.1 ID=prot_M-pyrifera_M_contig82267.19242.1|Name=mRNA_M-pyrifera_M_contig82267.19242.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=211bp GAFPPEFWQLFLQSNLTALGGKCRPVCVGMTWRRLLAAGTMRQWRPRLEEback to top mRNA from alignment at M-pyrifera_M_contig82267:89..721+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig82267.19242.1 ID=mRNA_M-pyrifera_M_contig82267.19242.1|Name=mRNA_M-pyrifera_M_contig82267.19242.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=633bp|location=Sequence derived from alignment at M-pyrifera_M_contig82267:89..721+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig82267:89..721+ >mRNA_M-pyrifera_M_contig82267.19242.1 ID=mRNA_M-pyrifera_M_contig82267.19242.1|Name=mRNA_M-pyrifera_M_contig82267.19242.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1266bp|location=Sequence derived from alignment at M-pyrifera_M_contig82267:89..721+ (Macrocystis pyrifera P11B4 male)back to top |