mRNA_M-pyrifera_M_contig81364.19029.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig81364.19029.1 vs. uniprot
Match: A0A0L0DJ90_THETB (Uncharacterized protein n=1 Tax=Thecamonas trahens ATCC 50062 TaxID=461836 RepID=A0A0L0DJ90_THETB) HSP 1 Score: 117 bits (293), Expect = 4.250e-26 Identity = 93/271 (34.32%), Postives = 122/271 (45.02%), Query Frame = 1 Query: 22 ARFVTDVTVFDHTTFQPGEKFVKTWRVRNEGEEEWPAATVLTTCGGQSMQSMPEGQAGVPVPIAKPGEAVDISLPMVAPRRPGRYLGYFRLFDTEAGSRFGSRIWVDIFV---RKTRAGTPPRDVPAPSAPPADTEDADLAAAQRASEET-------AALEXXXXXXXXXXXXRVAAEAEXXXXXXXXXXXXXXXXXEAARVAA---EXXXXXXXXXXXXXXXXXXXXXXXXXXXXQLGRLEVMGLGDRARNLELLRQHDGDLARVASDLL 795 ARF+ DVT+ D T P +FVK WR+RN+GE EWP T L GG M G+A V VP A PGE VD+++ MVAPR GRY GY+RL + G RFG R+WVD+ V A + + PA+ ++ +A+ A +E ALE + AEAE E V A + L +LE MG GD RNL LL +HD ++ARV ++LL Sbjct: 522 ARFIADVTMPDGTKLAPATQFVKIWRIRNDGETEWPEDTRLEFVGGDCML----GKA-VAVPAAAPGECVDVAVDMVAPRPAGRYCGYWRL-RSGTGVRFGHRVWVDVLVVPQEPVEADDDDDETVIETEAPAEVDNGATSASSAAGKEVDDDSVVAEALEPAATSA------ELEAEAETAEAQIAETEAVVDGAVEEIAVEATPDDAVAASDDDLVIVGDFASEVAAETEADLPPLAQLEAMGFGDTERNLTLLSKHDNNVARVVAELL 780
BLAST of mRNA_M-pyrifera_M_contig81364.19029.1 vs. uniprot
Match: H6S4B5_PLAVT (Ubiquitin-associated/translation elongation factor EF1B (Fragment) n=1 Tax=Plasmopara viticola TaxID=143451 RepID=H6S4B5_PLAVT) HSP 1 Score: 102 bits (253), Expect = 1.660e-22 Identity = 54/110 (49.09%), Postives = 70/110 (63.64%), Query Frame = 1 Query: 22 ARFVTDVTVFDHTTFQPGEKFVKTWRVRNEGEEEWPAATVLTTCGGQSMQSMPEGQAGVPVPIAKPGEAVDISLPMVAPRRPGRYLGYFRLFDTEAGSRFGSRIWVDIFV 351 A F DVT D + PGE F K W++RN G +WP VL+ GG MQ+ PE V +P PG+++D+SL M+AP +PGRY GY+RL T G+RFG R+WVDI V Sbjct: 40 AVFEGDVTCPDGSVLAPGEAFDKVWKLRNGGPNKWPIGAVLSCVGGDKMQA-PES---VLIPSVLPGKSIDVSLRMIAPLKPGRYTGYWRL-STPDGNRFGQRLWVDINV 144
BLAST of mRNA_M-pyrifera_M_contig81364.19029.1 vs. uniprot
Match: A0A421F0D5_9STRA (UBA domain-containing protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A421F0D5_9STRA) HSP 1 Score: 103 bits (256), Expect = 1.880e-21 Identity = 55/110 (50.00%), Postives = 70/110 (63.64%), Query Frame = 1 Query: 22 ARFVTDVTVFDHTTFQPGEKFVKTWRVRNEGEEEWPAATVLTTCGGQSMQSMPEGQAGVPVPIAKPGEAVDISLPMVAPRRPGRYLGYFRLFDTEAGSRFGSRIWVDIFV 351 A F DVT D T PGE F K W++RN G +WP +L+ GG MQ+ PE V +P PG+++D+SL MVAP +PGRY GY+RL T G+RFG R+WVDI V Sbjct: 283 AVFEGDVTCPDGTVLAPGEPFDKVWKLRNGGPNKWPIGAMLSCVGGDKMQA-PES---VLIPSVLPGKSIDVSLRMVAPAKPGRYTGYWRL-STADGNRFGQRLWVDINV 387
BLAST of mRNA_M-pyrifera_M_contig81364.19029.1 vs. uniprot
Match: G4ZKF8_PHYSP (UBA domain-containing protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4ZKF8_PHYSP) HSP 1 Score: 101 bits (252), Expect = 2.060e-21 Identity = 55/114 (48.25%), Postives = 70/114 (61.40%), Query Frame = 1 Query: 22 ARFVTDVTVFDHTTFQPGEKFVKTWRVRNEGEEEWPAATVLTTCGGQSMQSMPEGQAGVPVPIAKPGEAVDISLPMVAPRRPGRYLGYFRLFDTEAGSRFGSRIWVDIFVRKTR 363 A F DVT D T PGE F K W++RN G +WP L GG MQ+ PE V +P PG+++D+SL MVAP +PGRY GY+RL T G+RFG R+WVDI V + + Sbjct: 157 AVFEGDVTCPDGTVLAPGEPFDKVWKLRNGGPNKWPIGAELLCVGGDKMQA-PES---VLIPSVLPGKSIDVSLRMVAPAKPGRYTGYWRL-STPDGNRFGQRLWVDINVMEPK 265
BLAST of mRNA_M-pyrifera_M_contig81364.19029.1 vs. uniprot
Match: A0A6A3F1S8_9STRA (Uncharacterized protein n=7 Tax=Phytophthora TaxID=4783 RepID=A0A6A3F1S8_9STRA) HSP 1 Score: 102 bits (253), Expect = 4.840e-21 Identity = 55/110 (50.00%), Postives = 69/110 (62.73%), Query Frame = 1 Query: 22 ARFVTDVTVFDHTTFQPGEKFVKTWRVRNEGEEEWPAATVLTTCGGQSMQSMPEGQAGVPVPIAKPGEAVDISLPMVAPRRPGRYLGYFRLFDTEAGSRFGSRIWVDIFV 351 A F DVT D T PGE F K W++RN G +WP L+ GG MQ+ PE V +P PG+++D+SL MVAP +PGRY GY+RL T G+RFG R+WVDI V Sbjct: 283 AVFEGDVTCPDGTVLAPGEPFDKVWKLRNGGPNKWPIGAELSCVGGDKMQA-PES---VLIPSVLPGKSIDVSLRMVAPTKPGRYTGYWRL-STPDGNRFGQRLWVDINV 387
BLAST of mRNA_M-pyrifera_M_contig81364.19029.1 vs. uniprot
Match: A0A812YM53_9DINO (NBR1 protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812YM53_9DINO) HSP 1 Score: 101 bits (252), Expect = 1.210e-20 Identity = 55/117 (47.01%), Postives = 68/117 (58.12%), Query Frame = 1 Query: 16 PRARFVTDVTVFDHTTFQPGEKFVKTWRVRNEGEEEWPAATVLTTCGGQSMQSMPEGQAGVPVPIAKPGEAVDISLPMVAPRRPGRYLGYFRLFDTEAGSRFGSRIWVDIFVRKTRA 366 P A+FV VTV ++ QPGE F+K WRV+N G WP L GG S+ EG VPV PGE VDISL + AP PGR++GYFRL + G+RFG R W + V + A Sbjct: 677 PAAKFVAHVTVSKDSSVQPGETFLKVWRVQNSGHSTWPEGCRLINVGGNSLGVAEEG---VPVQSIAPGETVDISLALRAPAFPGRHVGYFRLVSPD-GTRFGHRFWHHMLVDSSNA 789
BLAST of mRNA_M-pyrifera_M_contig81364.19029.1 vs. uniprot
Match: A0A7S2W6Y7_9STRA (Hypothetical protein (Fragment) n=3 Tax=Sar TaxID=2698737 RepID=A0A7S2W6Y7_9STRA) HSP 1 Score: 95.9 bits (237), Expect = 1.050e-18 Identity = 54/135 (40.00%), Postives = 78/135 (57.78%), Query Frame = 1 Query: 13 KPRARFVTDVTVFDHTTFQPGEKFVKTWRVRNEGEEEWPAATVLTTCGGQSMQSMPEGQAGVPVPIAKPGEAVDISLPMVAPRRPGRYLGYFRLFDTEAGSRFGSRIWVDIFVRKTRAGTPPRDVPAPS--APPA 411 +P+A+FV D+++ D + +KTWR+ N G ++WP L GG+ M G P+P++ +D+SL +VAP RPGRY+GY+RL T RFG R+WVDI V++ T P P P+ APPA Sbjct: 558 RPQAKFVADLSLPDGSLVDANNHVLKTWRISNSGRQDWPEGVRLVCVGGERMSGPLNGLEVPPLPLSA---ELDLSLGLVAPERPGRYVGYWRLM-TGNQERFGHRLWVDITVKEPVTPTLPIAPPLPTFLAPPA 688
BLAST of mRNA_M-pyrifera_M_contig81364.19029.1 vs. uniprot
Match: A0A433QFB8_9FUNG (N_BRCA1_IG domain-containing protein n=1 Tax=Jimgerdemannia flammicorona TaxID=994334 RepID=A0A433QFB8_9FUNG) HSP 1 Score: 94.7 bits (234), Expect = 2.300e-18 Identity = 50/116 (43.10%), Postives = 66/116 (56.90%), Query Frame = 1 Query: 22 ARFVTDVTVFDHTTFQPGEKFVKTWRVRNEGEEEWPAATVLTTCGGQSMQSMP----EGQAGVPVPIAKPGEAVDISLPMVAPRRPGRYLGYFRLFDTEAGSRFGSRIWVDIFVRK 357 ARFV DV + D QP +F+K W++ N GEEEWP T L+ CGG M S + VP +PG+ V I+ + AP PG Y+ Y+RL + GSRFG R+W DI V + Sbjct: 202 ARFVEDVNIPDGAVMQPQARFLKIWKMLNNGEEEWPQGTQLSFCGGDRMFSEAWINTSDEYSFAVPATQPGKEVFITADLQAPADPGHYVSYWRLVAPD-GSRFGHRVWCDIVVEQ 316
BLAST of mRNA_M-pyrifera_M_contig81364.19029.1 vs. uniprot
Match: F4PSP5_CAVFA (ZZ-type zinc finger-containing protein n=1 Tax=Cavenderia fasciculata (strain SH3) TaxID=1054147 RepID=F4PSP5_CAVFA) HSP 1 Score: 94.4 bits (233), Expect = 3.180e-18 Identity = 46/110 (41.82%), Postives = 71/110 (64.55%), Query Frame = 1 Query: 22 ARFVTDVTVFDHTTFQPGEKFVKTWRVRNEGEEEWPAATVLTTCGGQSMQSMPEGQAGVPVPIAKPGEAVDISLPMVAPRRPGRYLGYFRLFDTEAGSRFGSRIWVDIFV 351 +R+V+D+ D + PG+ F K WR+RN+G ++WP T L+ G M S P+G V V A PG VD+++ +VAP PGRY+GY++LF E G+ +G R++ D++V Sbjct: 325 SRYVSDMATKDGSLLTPGQGFTKIWRLRNDGNQQWPENTTLSFVSGDRMSS-PDG---VTVEPALPGNDVDVAINLVAPSTPGRYIGYWKLFTPE-GNAYGQRLFADVYV 429
BLAST of mRNA_M-pyrifera_M_contig81364.19029.1 vs. uniprot
Match: A0A238FLR9_9BASI (BQ2448_6629 protein n=1 Tax=Microbotryum intermedium TaxID=269621 RepID=A0A238FLR9_9BASI) HSP 1 Score: 93.6 bits (231), Expect = 7.220e-18 Identity = 48/121 (39.67%), Postives = 64/121 (52.89%), Query Frame = 1 Query: 16 PRARFVTDVTVFDHTTFQPGEKFVKTWRVRNEGEEEWPAATVLTTCGGQSMQSMPEGQAGVP--VPIAKPGEAVDISLPMVAPRRPGRYLGYFRLFDTEAGSRFGSRIWVDIFVRKTRAGT 372 PRA FV DVT+ D + G F K WRV N G WPA++ L GG + P A + VP+A+PGE V++S + AP G+Y+ ++RL D FG R WV I V A + Sbjct: 868 PRASFVADVTLSDGSFVPSGAMFTKIWRVMNSGNVAWPASSCLVNVGGFTRMRSPTSSAALEFAVPVAQPGETVELSCELQAPEDEGKYMDHWRLVDQATQEYFGDRFWVAIVVESVHASS 988 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig81364.19029.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig81364.19029.1 >prot_M-pyrifera_M_contig81364.19029.1 ID=prot_M-pyrifera_M_contig81364.19029.1|Name=mRNA_M-pyrifera_M_contig81364.19029.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=267bp ARRCKPRARFVTDVTVFDHTTFQPGEKFVKTWRVRNEGEEEWPAATVLTTback to top mRNA from alignment at M-pyrifera_M_contig81364:51..851- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig81364.19029.1 ID=mRNA_M-pyrifera_M_contig81364.19029.1|Name=mRNA_M-pyrifera_M_contig81364.19029.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=801bp|location=Sequence derived from alignment at M-pyrifera_M_contig81364:51..851- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig81364:51..851- >mRNA_M-pyrifera_M_contig81364.19029.1 ID=mRNA_M-pyrifera_M_contig81364.19029.1|Name=mRNA_M-pyrifera_M_contig81364.19029.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1602bp|location=Sequence derived from alignment at M-pyrifera_M_contig81364:51..851- (Macrocystis pyrifera P11B4 male)back to top |