mRNA_M-pyrifera_M_contig80843.18913.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig80843.18913.1 vs. uniprot
Match: A0A482RIY0_9ARCH (WD40 repeat domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RIY0_9ARCH) HSP 1 Score: 117 bits (292), Expect = 1.960e-27 Identity = 71/208 (34.13%), Postives = 110/208 (52.88%), Query Frame = 1 Query: 1 LGTFEHSHSEEVSGLLWHPSLELHLLSGGEDQLINLFDVTKEGEEGALQLSLRPDAGVEKIGLFGEGGAFVWTVTQTHMLQLFSLGTGKAVASFPSIRESCHDAHIPCDTLLSC-FQAEPKREAAGSGEGEEKGDGVLWLLGSXXXXXXXXXFSVHPDGVSPEAI-LPSHATRGHRKGPIHCAAF---IDNHSSPFPTILTGGEDGRL 609 L T+ SH E V+ L +HP + HL+SGG+D L+ +FD+T E+ AL + ++ V + G FG+ GAFVW +T+T L L+++G+ + + +F S+R + +A +P D+LL C + A R L LL + + V+P A + SH + GH + PI C AF + HSS + +GGEDG L Sbjct: 105 LSTYVSSHMEAVTQLAFHPVIPHHLVSGGDDGLVCVFDLTVRTEDDALVVVFNAESAVSRFGFFGDSGAFVWIITRTETLSLWNIGSAERLGNFNSLRMTFMEADLPLDSLLECTYDASTSR---------------LTLLAADFEG------GAYACDVTPAAFSVQSHMSLGHVEAPIRCLAFAHVLSAHSSSL-VVYSGGEDGLL 290
BLAST of mRNA_M-pyrifera_M_contig80843.18913.1 vs. uniprot
Match: A0A812R516_9DINO (GTS1 protein n=3 Tax=Sar TaxID=2698737 RepID=A0A812R516_9DINO) HSP 1 Score: 93.2 bits (230), Expect = 1.220e-18 Identity = 67/219 (30.59%), Postives = 94/219 (42.92%), Query Frame = 1 Query: 1 LGTFEHSHSEEVSGLLWHPSLELHLLSGGEDQLINLFDVTKEGEEGALQLSLRPDAG---VEKIGLFGEGGAFVWTVTQTHMLQLFSLGTGKAVASFPSIRESCHDAHIPCDTLLSC-FQAEPKREAAGSGEGEEKGDGVLWLLGSXXXXXXXXXFSVHPDGVSPEAILPSHATRGHRKGPIHCAAFI---------DNHSSPFPTILTGGEDGRLCLW 618 LG++ +H+E V+ + H ++G ED ++ LFD + E+ AL +S+ P G V G FG G W V+ T L L+SL + VASFP + +C A + CDTLL C F A G L GS +V D P L + GH + C +I + +TGGEDGR+CLW Sbjct: 171 LGSYTETHAEPVTCVALGGPSGAHAITGSEDGMVALFDTSIATEDDAL-MSVLPMPGRQHVRACGFFGAGDGGAWGVSATSDLVLWSLASADVVASFPDLPGACRRAGLACDTLLGCHFDAA---------------SGALTCAGSAHDSGAVAVMNVRRDAAEPVGQLAAAPPSGHSDS-VRCIDWIAAAAAGGXXXXGAGALSGCVTGGEDGRVCLW 372
BLAST of mRNA_M-pyrifera_M_contig80843.18913.1 vs. uniprot
Match: A0A5A8E3Z4_CAFRO (Response regulatory domain-containing protein n=2 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8E3Z4_CAFRO) HSP 1 Score: 92.0 bits (227), Expect = 3.810e-18 Identity = 67/219 (30.59%), Postives = 93/219 (42.47%), Query Frame = 1 Query: 1 LGTFEHSHSEEVSGLLWHPSLELHLLSGGEDQLINLFDVTKEGEEGALQLSLRPDAG---VEKIGLFGEGGAFVWTVTQTHMLQLFSLGTGKAVASFPSIRESCHDAHIPCDTLLSC-FQAEPKREAAGSGEGEEKGDGVLWLLGSXXXXXXXXXFSVHPDGVSPEAILPSHATRGHRKGPIHCAAFI---------DNHSSPFPTILTGGEDGRLCLW 618 LG++ +H+E V+ + H ++G ED ++ LFD + E+ AL +S+ P G V G FG G W V+ T L L+SL + VASFP + +C A + CDTLL C F A G L GS +V D P L GH + C +I + +TGGEDGR+CLW Sbjct: 210 LGSYTETHAEPVTCVALGGPSGAHAITGSEDGMVALFDTSIATEDDAL-MSVLPMPGRQHVRACGFFGAGDGGAWGVSATSDLVLWSLASADVVASFPDLPGACRRAGLACDTLLGCHFDAA---------------SGALTCAGSAHDSGAVAVMNVRRDAAEPVGQLAVAPPSGHSDS-VRCIDWIAAAAAGGXXXXGAGALSGCVTGGEDGRVCLW 411
BLAST of mRNA_M-pyrifera_M_contig80843.18913.1 vs. uniprot
Match: A0A0B7MX36_9FUNG (Uncharacterized protein n=1 Tax=Parasitella parasitica TaxID=35722 RepID=A0A0B7MX36_9FUNG) HSP 1 Score: 71.2 bits (173), Expect = 7.590e-11 Identity = 55/207 (26.57%), Postives = 85/207 (41.06%), Query Frame = 1 Query: 1 LGTFEHSHSEEVSGLLWHPSLELHLLSGGEDQLINLFDVTKEGEEGALQLSLRPDAGVEKIGLFGEGGAFVWTVTQTHMLQLFSLGTGKAVASFPSIRESCHDAHIPCDTLLSC-FQAEPKREAAGSGEGEEKGDGVLWLLGSXXXXXXXXXFSVHPDGVSPEAILPSHATRGHRKGPIHCAAFIDNHSSPFPTILTGGEDGRLCLW 618 L TF+ SH ++V+ + HP+L +S D L+N +DVT+ EE A+ + P + V K G FG +++ +T L +L G + +F IR P D + C + +R +G+ D +G H D V + +H P +IL+GGEDGRLC W Sbjct: 511 LHTFDESHGDDVTEIQCHPTLRTQFISCSTDGLLNNYDVTEFDEEEAMISVVNPGSSVNKAGYFGPNAEYLYCLTHVETFSLHTL-EGDRICNFGDIRSI---GSTPVDYAIDCSYDPIAQRFYLITGDNSGTVDFFHVNIGQLQHCQQLRVTGGHSDVVR---------------------SLYWHH--PTQSILSGGEDGRLCAW 690
BLAST of mRNA_M-pyrifera_M_contig80843.18913.1 vs. uniprot
Match: A0A8H7VG15_9FUNG (Uncharacterized protein (Fragment) n=1 Tax=Mucor circinatus TaxID=2054153 RepID=A0A8H7VG15_9FUNG) HSP 1 Score: 70.5 bits (171), Expect = 8.620e-11 Identity = 57/206 (27.67%), Postives = 88/206 (42.72%), Query Frame = 1 Query: 1 LGTFEHSHSEEVSGLLWHPSLELHLLSGGEDQLINLFDVTKEGEEGALQLSLRPDAGVEKIGLFGEGGAFVWTVTQTHMLQLFSLGTGKAVASFPSIRESCHDAHIPCDTLLSCFQAEPKREAAGSGEGEEKGDGVLWLLGSXXXXXXXXXFSVHPDGVSPEAILPSHATRGHRKGPIHCAAFIDNHSSPFPTILTGGEDGRLCLW 618 L FE SH+++++ + HP+L HL++ D L+N +DVT E+ AL + + V+K G FG +V+++T L +L G + + +R+ D + E +R +G DG + LL P G S AF NHS+ +ILTGGEDGR+C W Sbjct: 157 LSRFEESHNDDITEIQCHPTLPSHLITSSADGLVNYYDVTDFDEQEALISVVNAGSAVQKAGFFGPDCEYVYSLTGNETFLLHTL-EGDLICDYGDVRQFDESIGYAIDCS---YDKETQRFYLITGNI----DGDVQLLHVNVNHVQHCQTLKAPGGHSDIV-----------------RAFHWNHSTQ--SILTGGEDGRMCAW 335
BLAST of mRNA_M-pyrifera_M_contig80843.18913.1 vs. uniprot
Match: S2JMU6_MUCC1 (Uncharacterized protein n=2 Tax=Mucor TaxID=4830 RepID=S2JMU6_MUCC1) HSP 1 Score: 70.1 bits (170), Expect = 1.160e-10 Identity = 57/209 (27.27%), Postives = 89/209 (42.58%), Query Frame = 1 Query: 1 LGTFEHSHSEEVSGLLWHPSLELHLLSGGEDQLINLFDVTKEGEEGALQLSLRPDAGVEKIGLFGEGGAFVWTVTQTHMLQLFSLGT--GKAVASFPSIRESCHDAHIPCDTLLSC-FQAEPKREAAGSGEGEEKGDGVLWLLGSXXXXXXXXXFSVHPDGVSPEAILPSHATRGHRKGPIHCAAFIDNHSSPFPTILTGGEDGRLCLW 618 L TF+ SH ++++ + HP+L +S D L+N +DVT+ EE A+ + + V K G FG +++ +T ++ FSL T G ++ +F IR P D + C + +R +G+ D +G H D V + NHS+ +ILTGGEDGRLC W Sbjct: 153 LHTFDESHGDDITEIQCHPTLPAQFISCSTDGLLNNYDVTEFDEEEAMLSVVNSGSSVNKAGYFGPNAEYLYCLTH---VETFSLHTTEGDSICNFGDIRSI---GLTPVDYAIDCSYDPVAQRFYLITGDNSGTVDFFHVNIGQLQHCQQLKVDGSHSDVVR---------------------SLYWNHSTQ--SILTGGEDGRLCAW 332
BLAST of mRNA_M-pyrifera_M_contig80843.18913.1 vs. uniprot
Match: A0A8J1Y9U2_OWEFU (WD repeat-containing protein 89 n=1 Tax=Owenia fusiformis TaxID=6347 RepID=A0A8J1Y9U2_OWEFU) HSP 1 Score: 70.1 bits (170), Expect = 1.350e-10 Identity = 50/208 (24.04%), Postives = 95/208 (45.67%), Query Frame = 1 Query: 10 FEHSHSEEVSGLLWHPSLELHLLSGGEDQLINLFDVTKEGEEGALQLSLRPDAGVEKIGLFGEGGAFVWTVTQTHMLQLFSLGTGKAVASFPSIRESCHDAHIPCDTLLSCFQAEPKREAAGSGEGEEKGDGVLWLLGSXXXXXXXXXFSVHPDGVSPEAILPSHATRGHRKGPIHCAAFID-----NHSSPFPTILTGGEDGRLCLW 618 F H+++++ + +HPS + SG D LIN++D+ + E+ A++++L ++ V K+G G GG ++ +T ++ G +A +++E+ + D L+ CF E G +LL H + ++ + +T+ G + C D ++SS +++TGGEDG LCLW Sbjct: 159 FTECHNDDITQVQFHPSEVHKMASGSTDGLINIYDLRETDEDDAIEMTLNTESSVGKLGWKGPGGDNLYCITHLETFHIWD-SEGDLLAEHKNLKENFKEL----DYLVDCF---------------EDGSSNFFLLAGS-----------HNGDMQVLSLGDAKSTKCSTVGSL-CKGHTDTVRSLSYSSSGCSLVTGGEDGMLCLW 334
BLAST of mRNA_M-pyrifera_M_contig80843.18913.1 vs. uniprot
Match: A0A835YUF3_9STRA (WD40-repeat-containing domain protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YUF3_9STRA) HSP 1 Score: 69.7 bits (169), Expect = 1.700e-10 Identity = 56/214 (26.17%), Postives = 86/214 (40.19%), Query Frame = 1 Query: 1 LGTFEHSHSEEVSGLLWHPSLELHLLSGGEDQLINLFDVTKEGEEGALQLSLRPDAGVEKIGLFGEGGAFVWTVTQTHMLQLFSLGTGKAVASFPSIRESCHDAHIPCDTLLSC---FQAEPKREAAGSGEGEEKGDGVLWLLGSXXXXXXXXXFSVHPDGVSPEAILPSHATRGHRKGPIHCAAFIDNHSSPFPTILTGGEDGRLCLWNHPRS 633 LG +E +H++ V+ L + P L S ED L+ +F+ + L + V ++G FG G A VW T + L L+ + + VA F + D L+ C A+ AG+ GE + V P GV+ A + + RGH AA + +++TGGED RLC W+ S Sbjct: 129 LGAYEDAHTDLVTCLAFRPGAPSQLASASEDGLVCVFEAAAAAGAEPVVAVLNAECPVRRVGFFGPGAAGVWAATGSEGLSLWHAPSAQRVAEFGGA--ALRRPRGAADYLVGCRYDAAADTLALVAGTFGGEVQVSAVT------------------PAGVAAPAAVGAAGARGH-------AAVVRAFDWAGQSLITGGEDARLCCWSFDSS 315
BLAST of mRNA_M-pyrifera_M_contig80843.18913.1 vs. uniprot
Match: A0A0C9MT00_9FUNG (WD repeat-containing protein 89 n=2 Tax=Mucor TaxID=4830 RepID=A0A0C9MT00_9FUNG) HSP 1 Score: 69.7 bits (169), Expect = 2.510e-10 Identity = 57/209 (27.27%), Postives = 88/209 (42.11%), Query Frame = 1 Query: 1 LGTFEHSHSEEVSGLLWHPSLELHLLSGGEDQLINLFDVTKEGEEGALQLSLRPDAGVEKIGLFGEGGAFVWTVTQTHMLQLFSLGT--GKAVASFPSIRESCHDAHIPCDTLLSC-FQAEPKREAAGSGEGEEKGDGVLWLLGSXXXXXXXXXFSVHPDGVSPEAILPSHATRGHRKGPIHCAAFIDNHSSPFPTILTGGEDGRLCLW 618 L TF+ SH ++++ + HP+L +S D L+N +DVT+ EE A+ + + V K G FG +++ +T ++ FSL T G + +F IR P D + C + +R +G+ D +G H D V + NHS+ +ILTGGEDGRLC W Sbjct: 467 LHTFDESHGDDITEIQCHPTLPAQFISCSTDGLLNNYDVTEFDEEEAMLAVVNSGSSVNKAGYFGPNAEYLYCLTH---VETFSLHTWEGDTICNFGDIRSI---GVTPVDYAIDCSYDPVAQRFYLITGDNSGTVDFFHVNVGQLQHCQQLKVTGGHSDVVR---------------------SLYWNHSTQ--SILTGGEDGRLCAW 646
BLAST of mRNA_M-pyrifera_M_contig80843.18913.1 vs. uniprot
Match: A0A7I8W970_9ANNE (WD repeat-containing protein 89 n=1 Tax=Dimorphilus gyrociliatus TaxID=2664684 RepID=A0A7I8W970_9ANNE) HSP 1 Score: 68.6 bits (166), Expect = 4.680e-10 Identity = 50/208 (24.04%), Postives = 88/208 (42.31%), Query Frame = 1 Query: 1 LGTFEHSHSEEVSGLLWHPSLELHLLSGGEDQLINLFDVTKEGEEGALQLSLRPDAGVEKIGLFGEGGAFVWTVTQTHMLQLFSLGTGKAVASFPSIRESCHDAHIPCDTLLSCFQAEPKREAAGSGEGEEKGDGVLWLLGSXXXXXXXXXFSVHPDGVSPEAILPSHATRGHRKGPIHCAAFIDNHSSPFPTILTGGEDGRLCLWNH 624 LG + H ++++ + +HP + L SG D L+N+F+V++ E+ ALQ++L ++ V +I G+ ++ +T T L ++ + IRE I + ++ Q + + G ++G+ L+ L H D V CA + S +LTGGED LCLW+H Sbjct: 162 LGAYSDGHDDDITQVKFHPENKDILASGSTDGLVNIFNVSEASEDDALQMTLNTESSVAEIDWTGDKSDRLYCLTHTESLLVWESNEWDCIRKIQDIREETKKYSI--NYAITLVQVDGHQTLVA---GTDRGNFHLFSLDDDKLDHLTGLELGHSDIV-------------------RCAKYDSEDQS----LLTGGEDSLLCLWDH 341 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig80843.18913.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig80843.18913.1 >prot_M-pyrifera_M_contig80843.18913.1 ID=prot_M-pyrifera_M_contig80843.18913.1|Name=mRNA_M-pyrifera_M_contig80843.18913.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=211bp LGTFEHSHSEEVSGLLWHPSLELHLLSGGEDQLINLFDVTKEGEEGALQLback to top mRNA from alignment at M-pyrifera_M_contig80843:261..893- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig80843.18913.1 ID=mRNA_M-pyrifera_M_contig80843.18913.1|Name=mRNA_M-pyrifera_M_contig80843.18913.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=633bp|location=Sequence derived from alignment at M-pyrifera_M_contig80843:261..893- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig80843:261..893- >mRNA_M-pyrifera_M_contig80843.18913.1 ID=mRNA_M-pyrifera_M_contig80843.18913.1|Name=mRNA_M-pyrifera_M_contig80843.18913.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1266bp|location=Sequence derived from alignment at M-pyrifera_M_contig80843:261..893- (Macrocystis pyrifera P11B4 male)back to top |