mRNA_M-pyrifera_M_contig80837.18911.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig80837.18911.1
Unique NamemRNA_M-pyrifera_M_contig80837.18911.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
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BLAST of mRNA_M-pyrifera_M_contig80837.18911.1 vs. uniprot
Match: A0A7S1T5J3_9CHLO (Intraflagellar transport protein 122 homolog (Fragment) n=1 Tax=Tetraselmis chuii TaxID=63592 RepID=A0A7S1T5J3_9CHLO)

HSP 1 Score: 351 bits (901), Expect = 2.550e-117
Identity = 165/268 (61.57%), Postives = 208/268 (77.61%), Query Frame = 1 
Query:    1 SFRPDGSELVVAVGNRVLVYDAGDGSLLHSLKGHKDSVYCVDYARNGKRFASGGADRTVIIWTARAEGIVKFTHLDSIQKVAYNPVTQQLASCTGSDVGLWSPEQKSVQKEKVSSRVLSASWTRDGQYLALGMVNGVISIRDKAGQEKVTITRPAPVWTLCWSPSRKEAAELLAVGCWDRTLSLYQLNGTQHKSDRKLGFDPCTLSFYNDGAYVLAGGSDRAASLWSKRALKLGDVATEDGWVWAAAQRPPKQPYVAVASHAGRVSVH 804
            +F+PDGS+L+  VGNRVLVYDAGDG LLH+L+GHKD+VYCV YAR+GKRFASGGAD+T+IIWT++AEGI+K++H DSI  +AYNPVTQQL+S T SD GLWSPEQKSV K KVSS+VL  +WT DGQYLALG  NG ISIRDKAG EKV I R AP+WT+ W+PS  E  ++LAVG WD  LS YQL+G Q   D++LG+DPCTLSF+++G Y+  GGSDR  +L +K   +L  +A  + WVW    RP KQ ++AV    G ++++
Sbjct:   25 AFKPDGSQLIAGVGNRVLVYDAGDGDLLHTLRGHKDTVYCVAYARDGKRFASGGADKTIIIWTSKAEGILKYSHNDSIVSLAYNPVTQQLSSATASDFGLWSPEQKSVAKHKVSSKVLCQAWTSDGQYLALGQYNGHISIRDKAGVEKVLIERTAPIWTIAWNPSPDEPYDMLAVGSWDGMLSYYQLSGVQIGKDKELGYDPCTLSFFSNGEYLCMGGSDRKVALCTKEGTRLTTIAERENWVWCGCPRP-KQNFIAVGCEDGTIALY 291
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BLAST of mRNA_M-pyrifera_M_contig80837.18911.1 vs. uniprot
Match: A0A485KGT5_9STRA (Intraflagellar transport protein 122 homolog n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KGT5_9STRA)

HSP 1 Score: 351 bits (901), Expect = 1.360e-116
Identity = 167/268 (62.31%), Postives = 206/268 (76.87%), Query Frame = 1 
Query:    1 SFRPDGSELVVAVGNRVLVYDAGDGSLLHSLKGHKDSVYCVDYARNGKRFASGGADRTVIIWTARAEGIVKFTHLDSIQKVAYNPVTQQLASCTGSDVGLWSPEQKSVQKEKVSSRVLSASWTRDGQYLALGMVNGVISIRDKAGQEKVTITRPAPVWTLCWSPSRKEAAELLAVGCWDRTLSLYQLNGTQHKSDRKLGFDPCTLSFYNDGAYVLAGGSDRAASLWSKRALKLGDVATEDGWVWAAAQRPPKQPYVAVASHAGRVSVH 804
            +F PDGS++V A+G+RV++YDA +G+LLHSLKGHKD+VY VD+A +GKRFASGGAD  VIIWT +AEGI+K+TH +SIQKVAYNP +Q LASCT SD GLWSPEQKSV K KV S++L A+W+ DG+YLALG+ NG I IRDK G EKVTI R APVWT+ WSPSR E  ++LAVGCWDRTLS YQ NGTQ+  DRKL FDPC +S++N G Y+L  GS+R ASL++K  + L D+     WVWA   RP K   +AV    G +S +
Sbjct:   25 AFHPDGSQIVAAIGSRVMIYDAVNGTLLHSLKGHKDTVYTVDFAHDGKRFASGGADNVVIIWTDKAEGILKYTHNESIQKVAYNPQSQCLASCTASDFGLWSPEQKSVAKHKVVSKILCANWSLDGEYLALGLFNGQILIRDKQGGEKVTIERSAPVWTIAWSPSRDEQMDILAVGCWDRTLSFYQFNGTQYGKDRKLQFDPCCVSYFNKGKYLLVSGSNRKASLYTKEGIFLSDICDTGAWVWAVKARP-KTNTIAVGCDDGTISAY 291
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BLAST of mRNA_M-pyrifera_M_contig80837.18911.1 vs. uniprot
Match: A0A397EQ07_9STRA (Intraflagellar transport protein 122 homolog n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397EQ07_9STRA)

HSP 1 Score: 354 bits (909), Expect = 3.560e-113
Identity = 167/266 (62.78%), Postives = 207/266 (77.82%), Query Frame = 1 
Query:    1 SFRPDGSELVVAVGNRVLVYDAGDGSLLHSLKGHKDSVYCVDYARNGKRFASGGADRTVIIWTARAEGIVKFTHLDSIQKVAYNPVTQQLASCTGSDVGLWSPEQKSVQKEKVSSRVLSASWTRDGQYLALGMVNGVISIRDKAGQEKVTITRPAPVWTLCWSPSRKEAAELLAVGCWDRTLSLYQLNGTQHKSDRKLGFDPCTLSFYNDGAYVLAGGSDRAASLWSKRALKLGDVATEDGWVWAAAQRPPKQPYVAVASHAGRVS 798
            ++ PDG++L+ A+G+RV++YDA +G+LLHSLKGHKD+VY VDYA +GKRFASGGAD  VIIWT +AEGI+K+TH DSIQKVAYNP +Q LASCT SD GLWSPEQKSV K KV S++LSASW+ DG+YLALGM NG I IRDK G EK+TI R APVW+L WSP R+E  ++LAVGCWDRTLS YQ NGTQ+  DRKL FDPC +SF+N G Y+L  GS+R ASL++K  + L D+     WVWA   RP +   +A+ +  G V+
Sbjct:   25 AYHPDGTQLIAAIGSRVMIYDASNGTLLHSLKGHKDTVYTVDYAHDGKRFASGGADNVVIIWTDKAEGILKYTHNDSIQKVAYNPQSQCLASCTASDFGLWSPEQKSVAKHKVVSKILSASWSLDGEYLALGMFNGHILIRDKHGGEKITIERTAPVWSLSWSPGREEQMDILAVGCWDRTLSFYQFNGTQYGKDRKLSFDPCCISFFNKGKYLLVSGSNRKASLYTKEGIFLSDICDVPAWVWAVKARP-RTHSIAIGTDNGTVA 289
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BLAST of mRNA_M-pyrifera_M_contig80837.18911.1 vs. uniprot
Match: A0A6A4ZGI1_9STRA (Intraflagellar transport protein 122 homolog (Fragment) n=2 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A6A4ZGI1_9STRA)

HSP 1 Score: 351 bits (901), Expect = 3.020e-111
Identity = 167/268 (62.31%), Postives = 206/268 (76.87%), Query Frame = 1 
Query:    1 SFRPDGSELVVAVGNRVLVYDAGDGSLLHSLKGHKDSVYCVDYARNGKRFASGGADRTVIIWTARAEGIVKFTHLDSIQKVAYNPVTQQLASCTGSDVGLWSPEQKSVQKEKVSSRVLSASWTRDGQYLALGMVNGVISIRDKAGQEKVTITRPAPVWTLCWSPSRKEAAELLAVGCWDRTLSLYQLNGTQHKSDRKLGFDPCTLSFYNDGAYVLAGGSDRAASLWSKRALKLGDVATEDGWVWAAAQRPPKQPYVAVASHAGRVSVH 804
            +F PDGS++V A+G+RV++YDA +G+LLHSLKGHKD+VY VD+A +GKRFASGGAD  VIIWT +AEGI+K+TH +SIQKVAYNP +Q LASCT SD GLWSPEQKSV K KV S++L A+W+ DG+YLALG+ NG I IRDK G EKVTI R APVWT+ WSPSR E  ++LAVGCWDRTLS YQ NGTQ+  DRKL FDPC +S++N G Y+L  GS+R ASL++K  + L D+     WVWA   RP K   +AV    G +S +
Sbjct:   25 AFHPDGSQIVAAIGSRVMIYDAVNGTLLHSLKGHKDTVYTVDFAHDGKRFASGGADNVVIIWTDKAEGILKYTHNESIQKVAYNPQSQCLASCTASDFGLWSPEQKSVAKHKVVSKILCANWSLDGEYLALGLFNGQILIRDKQGGEKVTIERSAPVWTIAWSPSRDEQMDILAVGCWDRTLSFYQFNGTQYGKDRKLQFDPCCVSYFNKGKYLLVSGSNRKASLYTKEGIFLSDICDTGAWVWAVKARP-KTNTIAVGCDDGTISAY 291
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BLAST of mRNA_M-pyrifera_M_contig80837.18911.1 vs. uniprot
Match: W4G5P7_9STRA (Intraflagellar transport protein 122 homolog n=9 Tax=Aphanomyces astaci TaxID=112090 RepID=W4G5P7_9STRA)

HSP 1 Score: 354 bits (909), Expect = 1.940e-110
Identity = 167/266 (62.78%), Postives = 207/266 (77.82%), Query Frame = 1 
Query:    1 SFRPDGSELVVAVGNRVLVYDAGDGSLLHSLKGHKDSVYCVDYARNGKRFASGGADRTVIIWTARAEGIVKFTHLDSIQKVAYNPVTQQLASCTGSDVGLWSPEQKSVQKEKVSSRVLSASWTRDGQYLALGMVNGVISIRDKAGQEKVTITRPAPVWTLCWSPSRKEAAELLAVGCWDRTLSLYQLNGTQHKSDRKLGFDPCTLSFYNDGAYVLAGGSDRAASLWSKRALKLGDVATEDGWVWAAAQRPPKQPYVAVASHAGRVS 798
            ++ PDG++L+ A+G+RV++YDA +G+LLHSLKGHKD+VY VDYA +GKRFASGGAD  VIIWT +AEGI+K+TH DSIQKVAYNP +Q LASCT SD GLWSPEQKSV K KV S++LSASW+ DG+YLALGM NG I IRDK G EK+TI R APVW+L WSP R+E  ++LAVGCWDRTLS YQ NGTQ+  DRKL FDPC +SF+N G Y+L  GS+R ASL++K  + L D+     WVWA   RP +   +A+ +  G V+
Sbjct:   25 AYHPDGTQLIAAIGSRVMIYDASNGTLLHSLKGHKDTVYTVDYAHDGKRFASGGADNVVIIWTDKAEGILKYTHNDSIQKVAYNPQSQCLASCTASDFGLWSPEQKSVAKHKVVSKILSASWSLDGEYLALGMFNGHILIRDKHGGEKITIERTAPVWSLSWSPGREEQMDILAVGCWDRTLSFYQFNGTQYGKDRKLSFDPCCISFFNKGKYLLVSGSNRKASLYTKEGIFLSDICDVPAWVWAVKARP-RTHSIAIGTDNGTVA 289
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BLAST of mRNA_M-pyrifera_M_contig80837.18911.1 vs. uniprot
Match: A0A6U8LP55_9EUGL (Intraflagellar transport protein 122 homolog n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A6U8LP55_9EUGL)

HSP 1 Score: 353 bits (905), Expect = 4.860e-110
Identity = 162/268 (60.45%), Postives = 210/268 (78.36%), Query Frame = 1 
Query:    1 SFRPDGSELVVAVGNRVLVYDAGDGSLLHSLKGHKDSVYCVDYARNGKRFASGGADRTVIIWTARAEGIVKFTHLDSIQKVAYNPVTQQLASCTGSDVGLWSPEQKSVQKEKVSSRVLSASWTRDGQYLALGMVNGVISIRDKAGQEKVTITRPAPVWTLCWSPSRKEAAELLAVGCWDRTLSLYQLNGTQHKSDRKLGFDPCTLSFYNDGAYVLAGGSDRAASLWSKRALKLGDVATEDGWVWAAAQRPPKQPYVAVASHAGRVSVH 804
            +F+PDG++L+  V NRVLVYDA  G ++HSLKGHKD VYCV Y+R+GKRFASGGAD+TVIIWT +AEGI+K+ H DSIQ VAYNP+TQQLAS T SD GLWSPEQKSV K KV+S+VL  SWT DG +LALG +NG IS+R K G EK+TI R +PVWTL W+PSR+E  ++LAVGCWD+TLS Y L+G     DR L FDPC++S++++G Y+  GGSD+  SLW+K  ++L  +A  + WVW+  QRP KQ +VAV S+ G+++++
Sbjct:   25 AFKPDGTQLIAGVANRVLVYDAAVGDMIHSLKGHKDVVYCVGYSRDGKRFASGGADKTVIIWTMKAEGILKYQHSDSIQCVAYNPITQQLASATSSDFGLWSPEQKSVSKHKVNSKVLCCSWTNDGHHLALGQLNGTISVRSKGGDEKLTIKRNSPVWTLSWNPSREEPFDILAVGCWDQTLSFYHLSGKPIGRDRTLDFDPCSISYFSNGEYICIGGSDQKVSLWTKEGVRLNTIAEMEDWVWSVKQRP-KQNFVAVGSNDGQITMY 291
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BLAST of mRNA_M-pyrifera_M_contig80837.18911.1 vs. uniprot
Match: A0A8I5KUK8_HUMAN (Intraflagellar transport protein 122 homolog n=1 Tax=Homo sapiens TaxID=9606 RepID=A0A8I5KUK8_HUMAN)

HSP 1 Score: 330 bits (846), Expect = 2.780e-109
Identity = 152/272 (55.88%), Postives = 204/272 (75.00%), Query Frame = 1 
Query:    1 SFRPDGSELVVAVGNRVLVYDAGDGSLLHSLKGHKDSVYCVDYARNGKRFASGGADRTVIIWTARAEGIVKFTHLDSIQKVAYNPVTQQLASCTGSDVGLWSPEQKSVQKEKVSSRVLSASWTRDGQYLALGMVNGVISIRDKAGQEKVTITRP----APVWTLCWSPSRKEAAELLAVGCWDRTLSLYQLNGTQHKSDRKLGFDPCTLSFYNDGAYVLAGGSDRAASLWSKRALKLGDVATEDGWVWAAAQRPPKQPYVAVASHAGRVSVH 804
            +F+PDG++L++A G+R+LVYD  DG+LL  LKGHKD+VYCV YA++GKRFASG AD++VIIWT++ EGI+K+TH D+IQ V+YNP+T QLASC+ SD GLWSPEQKSV K K SS+++  SWT DGQYLALGM NG+ISIR+K G+EKV I RP    +P+W++CW+PSR+E  ++LAV  W + +S YQL+G Q   DR L FDPC +S++  G Y+L GGSD+  SL++K  ++LG V  ++ WVW   Q  P   YV V    G +S +
Sbjct:   19 AFKPDGTQLILAAGSRLLVYDTSDGTLLQPLKGHKDTVYCVAYAKDGKRFASGSADKSVIIWTSKLEGILKYTHNDAIQCVSYNPITHQLASCSSSDFGLWSPEQKSVSKHKSSSKIICCSWTNDGQYLALGMFNGIISIRNKNGEEKVKIERPGGSLSPIWSICWNPSREERNDILAVADWGQKVSFYQLSGKQIGKDRALNFDPCCISYFTKGEYILLGGSDKQVSLFTKDGVRLGTVGEQNSWVWTC-QAKPDSNYVVVGCQDGTISFY 289
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BLAST of mRNA_M-pyrifera_M_contig80837.18911.1 vs. uniprot
Match: A0A024TKF9_9STRA (Intraflagellar transport protein 122 homolog n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TKF9_9STRA)

HSP 1 Score: 351 bits (900), Expect = 3.430e-109
Identity = 168/266 (63.16%), Postives = 203/266 (76.32%), Query Frame = 1 
Query:    1 SFRPDGSELVVAVGNRVLVYDAGDGSLLHSLKGHKDSVYCVDYARNGKRFASGGADRTVIIWTARAEGIVKFTHLDSIQKVAYNPVTQQLASCTGSDVGLWSPEQKSVQKEKVSSRVLSASWTRDGQYLALGMVNGVISIRDKAGQEKVTITRPAPVWTLCWSPSRKEAAELLAVGCWDRTLSLYQLNGTQHKSDRKLGFDPCTLSFYNDGAYVLAGGSDRAASLWSKRALKLGDVATEDGWVWAAAQRPPKQPYVAVASHAGRVS 798
            ++ PDG++LV A+G RV++YD  +G+LLHSLKGHKD+VY VDYA +GKRFASGGAD  VIIWT +AEGI+K+TH DSIQKVAYNP +Q LASCT SD GLWSPEQKSV K KV S++LSASW+ DG+YLA+GM NG I IRDK G EKVTI R APVWTL WSP R +  ++LAVGCWDRTLS YQ NGTQ+  DRKL FDPC +SF+N G Y+L  GS+R ASL++K  + L D+     WVW    RP K   +AV +  G V+
Sbjct:   25 AYHPDGTQLVAAIGTRVMIYDTTNGTLLHSLKGHKDTVYTVDYAHDGKRFASGGADNVVIIWTDKAEGILKYTHNDSIQKVAYNPQSQCLASCTASDFGLWSPEQKSVAKHKVVSKILSASWSVDGEYLAMGMFNGQILIRDKQGGEKVTIERTAPVWTLSWSPGRDDQTDILAVGCWDRTLSFYQFNGTQYGKDRKLTFDPCCVSFFNKGKYLLVAGSNRKASLYTKEGIFLSDICEVPAWVWTVKARP-KANTIAVGTDNGTVA 289
[Close]
BLAST of mRNA_M-pyrifera_M_contig80837.18911.1 vs. uniprot
Match: A0A6P8P6H5_GEOSA (Intraflagellar transport protein 122 homolog n=2 Tax=Tetrapoda TaxID=32523 RepID=A0A6P8P6H5_GEOSA)

HSP 1 Score: 322 bits (826), Expect = 6.530e-108
Identity = 146/254 (57.48%), Postives = 195/254 (76.77%), Query Frame = 1 
Query:    1 SFRPDGSELVVAVGNRVLVYDAGDGSLLHSLKGHKDSVYCVDYARNGKRFASGGADRTVIIWTARAEGIVKFTHLDSIQKVAYNPVTQQLASCTGSDVGLWSPEQKSVQKEKVSSRVLSASWTRDGQYLALGMVNGVISIRDKAGQEKVTITRP----APVWTLCWSPSRKEAAELLAVGCWDRTLSLYQLNGTQHKSDRKLGFDPCTLSFYNDGAYVLAGGSDRAASLWSKRALKLGDVATEDGWVWAAAQRP 750
            +F+PDG++L+VA GNRVLVYD  DG+L+  LKGHKD+VYCV YA++GKRFASG AD++VIIWT++ EGI+K+TH DSIQ VAYNPVT QLASC+ SDVGLWSPEQKSV K K SS++   SWT DGQYLALGM NG++SIR+K G+EKV I RP    +PVW++ W+PS+ E  ++L V  W + LS YQL+G Q   D+ L FDPC +S+++ G Y++ GGSD+  SL++K  ++LG +  ++ W+W    +P
Sbjct:   25 AFKPDGTQLIVAAGNRVLVYDTSDGTLIQPLKGHKDTVYCVAYAKDGKRFASGSADKSVIIWTSKLEGILKYTHNDSIQCVAYNPVTHQLASCSSSDVGLWSPEQKSVSKHKTSSKITCCSWTNDGQYLALGMFNGIVSIRNKNGEEKVKIERPGGALSPVWSISWNPSKDEHNDILVVADWGQKLSFYQLSGKQIGKDKVLNFDPCCVSYFSKGEYIVMGGSDKRVSLYTKDGVRLGTIGEQNSWLWTCKVKP 278
[Close]
BLAST of mRNA_M-pyrifera_M_contig80837.18911.1 vs. uniprot
Match: UPI001EAFF4B1 (intraflagellar transport protein 122 homolog isoform X2 n=1 Tax=Haliotis rufescens TaxID=6454 RepID=UPI001EAFF4B1)

HSP 1 Score: 323 bits (827), Expect = 1.030e-107
Identity = 156/271 (57.56%), Postives = 200/271 (73.80%), Query Frame = 1 
Query:    4 FRPDGSELVVAVGNRVLVYDAGDGSLLHSLKGHKDSVYCVDYARNGKRFASGGADRTVIIWTARAEGIVKFTHLDSIQKVAYNPVTQQLASCTGSDVGLWSPEQKSVQKEKVSSRVLSASWTRDGQYLALGMVNGVISIRDKAGQEKVTITRP----APVWTLCWSPSRKEAAELLAVGCWDRTLSLYQLNGTQHKSDRKLGFDPCTLSFYNDGAYVLAGGSDRAASLWSKRALKLGDVATEDGWVWAAAQRPPKQPYVAVASHAGRVSVH 804
            F+ DGS+LVVA GNRVLVYDA DG+++  LKGHKD+VYCV YA++GKRFASG AD++VIIWT++ EGI+K+TH D+IQ ++YNPVT QLASC  SD GLWSPEQKSV K KVSSRV   SWT DGQYLALG+ NG++SIR+K G+EKV I RP    APVW+L W+PSR E+ ++LA+  W + LS YQL+G Q   DR LG+DP  +S+++ G YV+ GGS +   L +K  +KLG +  +  WVW AA RP    YV V    G ++ +
Sbjct:   26 FKSDGSQLVVAAGNRVLVYDANDGTMIQPLKGHKDTVYCVAYAKDGKRFASGSADKSVIIWTSKLEGILKYTHNDAIQCMSYNPVTHQLASCAVSDFGLWSPEQKSVSKHKVSSRVTCCSWTNDGQYLALGLYNGLVSIRNKGGEEKVKIERPGANIAPVWSLSWNPSRDESYDVLAIADWGQRLSFYQLSGKQIGKDRTLGYDPTCVSWFSRGEYVVVGGSSKQCCLHTKEGVKLGVIGDQTSWVWCAAVRPDSN-YVVVGCQDGTIAYY 295
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig80837.18911.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S1T5J3_9CHLO2.550e-11761.57Intraflagellar transport protein 122 homolog (Frag... [more]
A0A485KGT5_9STRA1.360e-11662.31Intraflagellar transport protein 122 homolog n=1 T... [more]
A0A397EQ07_9STRA3.560e-11362.78Intraflagellar transport protein 122 homolog n=2 T... [more]
A0A6A4ZGI1_9STRA3.020e-11162.31Intraflagellar transport protein 122 homolog (Frag... [more]
W4G5P7_9STRA1.940e-11062.78Intraflagellar transport protein 122 homolog n=9 T... [more]
A0A6U8LP55_9EUGL4.860e-11060.45Intraflagellar transport protein 122 homolog n=1 T... [more]
A0A8I5KUK8_HUMAN2.780e-10955.88Intraflagellar transport protein 122 homolog n=1 T... [more]
A0A024TKF9_9STRA3.430e-10963.16Intraflagellar transport protein 122 homolog n=2 T... [more]
A0A6P8P6H5_GEOSA6.530e-10857.48Intraflagellar transport protein 122 homolog n=2 T... [more]
UPI001EAFF4B11.030e-10757.56intraflagellar transport protein 122 homolog isofo... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig80837contigM-pyrifera_M_contig80837:65..941 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score352.4
Seed ortholog evalue1.8e-94
Seed eggNOG ortholog157072.XP_008876784.1
Preferred nameIFT122
KEGG koko:K16547,ko:K19656
Hectar predicted targeting categoryother localisation
GOsGO:0001654,GO:0001838,GO:0001841,GO:0001843,GO:0002009,GO:0003002,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005815,GO:0005829,GO:0005856,GO:0005929,GO:0006810,GO:0006928,GO:0006996,GO:0007017,GO:0007018,GO:0007154,GO:0007165,GO:0007166,GO:0007224,GO:0007227,GO:0007275,GO:0007389,GO:0007399,GO:0007417,GO:0007423,GO:0007507,GO:0008104,GO:0008150,GO:0008285,GO:0008589,GO:0009653,GO:0009790,GO:0009792,GO:0009887,GO:0009888,GO:0009953,GO:0009966,GO:0009968,GO:0009987,GO:0010171,GO:0010172,GO:0010646,GO:0010648,GO:0010970,GO:0014020,GO:0015630,GO:0016043,GO:0016331,GO:0021510,GO:0021511,GO:0021513,GO:0021532,GO:0021904,GO:0021914,GO:0021915,GO:0022607,GO:0023051,GO:0023052,GO:0023057,GO:0030030,GO:0030031,GO:0030326,GO:0030705,GO:0030990,GO:0030991,GO:0031503,GO:0031974,GO:0031981,GO:0032391,GO:0032501,GO:0032502,GO:0032991,GO:0033036,GO:0033365,GO:0034613,GO:0035050,GO:0035107,GO:0035108,GO:0035113,GO:0035115,GO:0035136,GO:0035148,GO:0035239,GO:0035295,GO:0035556,GO:0035720,GO:0035721,GO:0035735,GO:0035869,GO:0036064,GO:0042073,GO:0042127,GO:0042733,GO:0042995,GO:0043005,GO:0043009,GO:0043010,GO:0043113,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0044085,GO:0044422,GO:0044424,GO:0044428,GO:0044430,GO:0044441,GO:0044444,GO:0044446,GO:0044463,GO:0044464,GO:0044782,GO:0045184,GO:0045879,GO:0046626,GO:0046907,GO:0048513,GO:0048518,GO:0048519,GO:0048523,GO:0048568,GO:0048580,GO:0048582,GO:0048583,GO:0048585,GO:0048592,GO:0048593,GO:0048598,GO:0048646,GO:0048729,GO:0048731,GO:0048736,GO:0048856,GO:0050678,GO:0050680,GO:0050789,GO:0050793,GO:0050794,GO:0050896,GO:0051093,GO:0051094,GO:0051179,GO:0051234,GO:0051239,GO:0051240,GO:0051241,GO:0051641,GO:0051649,GO:0051668,GO:0051716,GO:0051960,GO:0051961,GO:0060173,GO:0060271,GO:0060429,GO:0060562,GO:0060606,GO:0060830,GO:0060831,GO:0060971,GO:0060972,GO:0061062,GO:0061063,GO:0061065,GO:0061066,GO:0061512,GO:0065007,GO:0070013,GO:0070727,GO:0070925,GO:0071840,GO:0072175,GO:0072359,GO:0072594,GO:0072657,GO:0090596,GO:0097458,GO:0097499,GO:0097500,GO:0097542,GO:0097546,GO:0097730,GO:0097731,GO:0097733,GO:0099111,GO:0120025,GO:0120031,GO:0120036,GO:0120038,GO:1900076,GO:1903441,GO:1905515,GO:1990778,GO:2000026
EggNOG free text desc.ciliary receptor clustering involved in smoothened signaling pathway
EggNOG OGsCOG2319@1,KOG1538@2759
COG Functional cat.L
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko03036,ko04812
Exons2
Model size804
Cds size804
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816713.1305504-CDS-M-pyrifera_M_contig80837:64..1611622816713.1305504-CDS-M-pyrifera_M_contig80837:64..161Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig80837 65..161 +
1692278135.378867-CDS-M-pyrifera_M_contig80837:64..1611692278135.378867-CDS-M-pyrifera_M_contig80837:64..161Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig80837 65..161 +
1622816713.1414607-CDS-M-pyrifera_M_contig80837:234..9411622816713.1414607-CDS-M-pyrifera_M_contig80837:234..941Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig80837 235..941 +
1692278135.3897543-CDS-M-pyrifera_M_contig80837:234..9411692278135.3897543-CDS-M-pyrifera_M_contig80837:234..941Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig80837 235..941 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig80837.18911.1prot_M-pyrifera_M_contig80837.18911.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig80837 65..941 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig80837.18911.1

>prot_M-pyrifera_M_contig80837.18911.1 ID=prot_M-pyrifera_M_contig80837.18911.1|Name=mRNA_M-pyrifera_M_contig80837.18911.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=268bp
SFRPDGSELVVAVGNRVLVYDAGDGSLLHSLKGHKDSVYCVDYARNGKRF
ASGGADRTVIIWTARAEGIVKFTHLDSIQKVAYNPVTQQLASCTGSDVGL
WSPEQKSVQKEKVSSRVLSASWTRDGQYLALGMVNGVISIRDKAGQEKVT
ITRPAPVWTLCWSPSRKEAAELLAVGCWDRTLSLYQLNGTQHKSDRKLGF
DPCTLSFYNDGAYVLAGGSDRAASLWSKRALKLGDVATEDGWVWAAAQRP
PKQPYVAVASHAGRVSVH
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mRNA from alignment at M-pyrifera_M_contig80837:65..941+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig80837.18911.1 ID=mRNA_M-pyrifera_M_contig80837.18911.1|Name=mRNA_M-pyrifera_M_contig80837.18911.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=877bp|location=Sequence derived from alignment at M-pyrifera_M_contig80837:65..941+ (Macrocystis pyrifera P11B4 male)
TCGTTCCGACCAGATGGGAGCGAGCTGGTTGTTGCCGTGGGGAACCGCGT
GCTCGTGTACGATGCAGGTGACGGTTCTCTGCTGCACTCGCTGAAAGGTG
AGGGTTCGCTGCAGCGTGGCGTTTGCGTGCATGCGCGTCTCACACACACA
CACGCACCCCACCCACACAGGCCACAAGGACTCTGTGTACTGCGTGGACT
ACGCGCGCAACGGGAAGCGCTTCGCCTCTGGCGGCGCCGACCGCACGGTG
ATCATCTGGACTGCACGCGCGGAGGGCATTGTCAAGTTCACCCACTTGGA
CTCGATCCAGAAGGTGGCGTACAACCCGGTGACGCAGCAGCTTGCGTCCT
GCACCGGCTCCGATGTGGGCCTGTGGTCGCCGGAGCAGAAGAGCGTGCAG
AAGGAGAAGGTGTCGTCGCGAGTGCTGTCCGCGAGCTGGACGCGCGACGG
ACAGTACCTGGCGCTGGGCATGGTGAACGGCGTGATCTCGATCCGGGACA
AGGCCGGGCAGGAGAAGGTAACCATCACCCGGCCGGCGCCGGTGTGGACG
CTGTGCTGGTCGCCGTCGCGCAAGGAGGCGGCGGAGCTGCTGGCGGTGGG
ATGCTGGGACCGGACGCTGTCGCTGTACCAACTGAACGGCACGCAGCACA
AGAGCGACCGCAAGCTGGGCTTCGACCCGTGCACGCTCTCGTTCTACAAC
GACGGCGCGTACGTGCTGGCCGGCGGCAGCGACCGCGCGGCGTCGCTGTG
GAGCAAGCGGGCGCTGAAGCTGGGGGACGTGGCGACGGAAGACGGGTGGG
TGTGGGCTGCGGCGCAGCGGCCGCCGAAGCAGCCGTACGTGGCCGTGGCC
TCGCACGCTGGCCGGGTCAGCGTGCAC
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig80837:65..941+

>mRNA_M-pyrifera_M_contig80837.18911.1 ID=mRNA_M-pyrifera_M_contig80837.18911.1|Name=mRNA_M-pyrifera_M_contig80837.18911.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1608bp|location=Sequence derived from alignment at M-pyrifera_M_contig80837:65..941+ (Macrocystis pyrifera P11B4 male)
TCGTTCCGACCAGATGGGAGCGAGCTGGTTGTTGCCGTGGGGAACCGCGT
GCTCGTGTACGATGCAGGTGACGGTTCTCTGCTGCACTCGCTGAAAGTCG
TTCCGACCAGATGGGAGCGAGCTGGTTGTTGCCGTGGGGAACCGCGTGCT
CGTGTACGATGCAGGTGACGGTTCTCTGCTGCACTCGCTGAAAGGCCACA
AGGACTCTGTGTACTGCGTGGACTACGCGCGCAACGGGAAGCGCTTCGCC
TCTGGCGGCGCCGACCGCACGGTGATCATCTGGACTGCACGCGCGGAGGG
CATTGTCAAGTTCACCCACTTGGACTCGATCCAGAAGGTGGCGTACAACC
CGGTGACGCAGCAGCTTGCGTCCTGCACCGGCTCCGATGTGGGCCTGTGG
TCGCCGGAGCAGAAGAGCGTGCAGAAGGAGAAGGTGTCGTCGCGAGTGCT
GTCCGCGAGCTGGACGCGCGACGGACAGTACCTGGCGCTGGGCATGGTGA
ACGGCGTGATCTCGATCCGGGACAAGGCCGGGCAGGAGAAGGTAACCATC
ACCCGGCCGGCGCCGGTGTGGACGCTGTGCTGGTCGCCGTCGCGCAAGGA
GGCGGCGGAGCTGCTGGCGGTGGGATGCTGGGACCGGACGCTGTCGCTGT
ACCAACTGAACGGCACGCAGCACAAGAGCGACCGCAAGCTGGGCTTCGAC
CCGTGCACGCTCTCGTTCTACAACGACGGCGCGTACGTGCTGGCCGGCGG
CAGCGACCGCGCGGCGTCGCTGTGGAGCAAGCGGGCGCTGAAGCTGGGGG
ACGTGGCGACGGAAGACGGGTGGGTGTGGGCTGCGGCGCAGCGGCCGCCG
AAGCAGCCGTACGTGGCCGTGGCCTCGCACGCTGGCCGGGTCAGCGTGCA
CGCCACAAGGACTCTGTGTACTGCGTGGACTACGCGCGCAACGGGAAGCG
CTTCGCCTCTGGCGGCGCCGACCGCACGGTGATCATCTGGACTGCACGCG
CGGAGGGCATTGTCAAGTTCACCCACTTGGACTCGATCCAGAAGGTGGCG
TACAACCCGGTGACGCAGCAGCTTGCGTCCTGCACCGGCTCCGATGTGGG
CCTGTGGTCGCCGGAGCAGAAGAGCGTGCAGAAGGAGAAGGTGTCGTCGC
GAGTGCTGTCCGCGAGCTGGACGCGCGACGGACAGTACCTGGCGCTGGGC
ATGGTGAACGGCGTGATCTCGATCCGGGACAAGGCCGGGCAGGAGAAGGT
AACCATCACCCGGCCGGCGCCGGTGTGGACGCTGTGCTGGTCGCCGTCGC
GCAAGGAGGCGGCGGAGCTGCTGGCGGTGGGATGCTGGGACCGGACGCTG
TCGCTGTACCAACTGAACGGCACGCAGCACAAGAGCGACCGCAAGCTGGG
CTTCGACCCGTGCACGCTCTCGTTCTACAACGACGGCGCGTACGTGCTGG
CCGGCGGCAGCGACCGCGCGGCGTCGCTGTGGAGCAAGCGGGCGCTGAAG
CTGGGGGACGTGGCGACGGAAGACGGGTGGGTGTGGGCTGCGGCGCAGCG
GCCGCCGAAGCAGCCGTACGTGGCCGTGGCCTCGCACGCTGGCCGGGTCA
GCGTGCAC
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