mRNA_M-pyrifera_M_contig80675.18883.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig80675.18883.1
Unique NamemRNA_M-pyrifera_M_contig80675.18883.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig80675.18883.1 vs. uniprot
Match: A0A2R5G1F9_9STRA (Non-specific serine/threonine protein kinase n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5G1F9_9STRA)

HSP 1 Score: 160 bits (404), Expect = 3.090e-44
Identity = 78/125 (62.40%), Postives = 99/125 (79.20%), Query Frame = 1
Query:    1 MKLNASALRHLDRDDFRVLSGVELGMRNHEYVPVELIARVAGLRRGGIGMILSKVCRLGLLHRQRKAFEGYRLTSQGYDYLALRALVRRGTVVALGRQIGVGKESDVFIAQSDDGDEVVVKFHRL 375
            MKL+A+ALR+LDR+DFRVL+ VE+GMRNHE VPVEL+ ++A LR GG   ILS + R  LLH  R+ F+GYRLTS GYD+LALR LV RG V+ +GRQIGVGKESD+F+  ++D +E  +K HRL
Sbjct:    1 MKLDANALRYLDREDFRVLTAVEMGMRNHELVPVELVTQIASLRLGGAKKILSTLLRHKLLHHDRQHFDGYRLTSLGYDFLALRTLVARGLVMGVGRQIGVGKESDIFVVLNEDHEEFCLKLHRL 125          
BLAST of mRNA_M-pyrifera_M_contig80675.18883.1 vs. uniprot
Match: D0MY80_PHYIT (Non-specific serine/threonine protein kinase n=4 Tax=Phytophthora TaxID=4783 RepID=D0MY80_PHYIT)

HSP 1 Score: 151 bits (381), Expect = 1.590e-41
Identity = 71/125 (56.80%), Postives = 95/125 (76.00%), Query Frame = 1
Query:    1 MKLNASALRHLDRDDFRVLSGVELGMRNHEYVPVELIARVAGLRRGGIGMILSKVCRLGLLHRQRKAFEGYRLTSQGYDYLALRALVRRGTVVALGRQIGVGKESDVFIAQSDDGDEVVVKFHRL 375
            MKL+ +A+R+L R+ FRVL+ +E+GM+NHE VPVELI+ +A LR GG+  ILS + R  L+     A++GYRLT  GYDYLALR  ++RG +  LGRQIGVGKESD+++A  +DG EV +KFHRL
Sbjct:    1 MKLDVTAMRYLTREHFRVLTAIEMGMKNHEVVPVELISSIAKLRHGGVQKILSHLLRNKLIAHDGNAYDGYRLTYNGYDYLALRVFLQRGHITGLGRQIGVGKESDIYLATQEDGTEVAIKFHRL 125          
BLAST of mRNA_M-pyrifera_M_contig80675.18883.1 vs. uniprot
Match: G4YME8_PHYSP (Non-specific serine/threonine protein kinase n=5 Tax=Phytophthora TaxID=4783 RepID=G4YME8_PHYSP)

HSP 1 Score: 151 bits (381), Expect = 1.650e-41
Identity = 71/125 (56.80%), Postives = 96/125 (76.80%), Query Frame = 1
Query:    1 MKLNASALRHLDRDDFRVLSGVELGMRNHEYVPVELIARVAGLRRGGIGMILSKVCRLGLLHRQRKAFEGYRLTSQGYDYLALRALVRRGTVVALGRQIGVGKESDVFIAQSDDGDEVVVKFHRL 375
            MKL+ +A+R+L ++ FRVL+ +E+GM+NHE VPVELIA +A LR GG+  ILS + R  L+     A++G+RLT  GYDYLALR  ++RG +V LGRQIGVGKESD+++A  +DG EV +KFHRL
Sbjct:    1 MKLDVTAMRYLTKEHFRVLTAIEMGMKNHEVVPVELIASIAKLRHGGVQKILSHLLRNKLIAHDGNAYDGFRLTYNGYDYLALRVFLQRGHIVGLGRQIGVGKESDIYLATQEDGTEVAIKFHRL 125          
BLAST of mRNA_M-pyrifera_M_contig80675.18883.1 vs. uniprot
Match: A0A662WQN5_9STRA (Non-specific serine/threonine protein kinase n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WQN5_9STRA)

HSP 1 Score: 146 bits (369), Expect = 2.040e-41
Identity = 68/125 (54.40%), Postives = 95/125 (76.00%), Query Frame = 1
Query:    1 MKLNASALRHLDRDDFRVLSGVELGMRNHEYVPVELIARVAGLRRGGIGMILSKVCRLGLLHRQRKAFEGYRLTSQGYDYLALRALVRRGTVVALGRQIGVGKESDVFIAQSDDGDEVVVKFHRL 375
            MKL+ +A+R+L ++ FRVL+ +E+GM+NHE VPVELI+ +A LR GG+  ILS + R  L+     A++G+RLT  GYD+LALR  ++RG +  LGRQIGVGKESD+++A  +DG EV +KFHRL
Sbjct:    1 MKLDVTAMRYLTKEHFRVLTAIEMGMKNHEVVPVELISSIAKLRHGGVQKILSHLLRNKLVAHDGNAYDGFRLTYSGYDFLALRVFLQRGHITGLGRQIGVGKESDIYLATQEDGTEVAIKFHRL 125          
BLAST of mRNA_M-pyrifera_M_contig80675.18883.1 vs. uniprot
Match: A0A5D6Y6L5_9STRA (Non-specific serine/threonine protein kinase n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y6L5_9STRA)

HSP 1 Score: 150 bits (379), Expect = 3.130e-41
Identity = 70/125 (56.00%), Postives = 95/125 (76.00%), Query Frame = 1
Query:    1 MKLNASALRHLDRDDFRVLSGVELGMRNHEYVPVELIARVAGLRRGGIGMILSKVCRLGLLHRQRKAFEGYRLTSQGYDYLALRALVRRGTVVALGRQIGVGKESDVFIAQSDDGDEVVVKFHRL 375
            MKL+A+A+R+L ++ FRVL+ +E+GM+NHE VPVELI  +A LR GG+  ILS + R  L+  +  A++G+RLT  GYDYLAL+  + RG +  LGRQIGVGKESD+F+A  +DG EV +KFHRL
Sbjct:    1 MKLDATAMRYLTKEHFRVLTAIEMGMKNHEVVPVELITSIAKLRHGGVNKILSHLLRNTLIAHEGNAYDGFRLTHSGYDYLALKVFLERGHIAGLGRQIGVGKESDIFLAIQEDGTEVAIKFHRL 125          
BLAST of mRNA_M-pyrifera_M_contig80675.18883.1 vs. uniprot
Match: A0A3M6VBI4_9STRA (Non-specific serine/threonine protein kinase n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VBI4_9STRA)

HSP 1 Score: 149 bits (377), Expect = 5.830e-41
Identity = 70/125 (56.00%), Postives = 95/125 (76.00%), Query Frame = 1
Query:    1 MKLNASALRHLDRDDFRVLSGVELGMRNHEYVPVELIARVAGLRRGGIGMILSKVCRLGLLHRQRKAFEGYRLTSQGYDYLALRALVRRGTVVALGRQIGVGKESDVFIAQSDDGDEVVVKFHRL 375
            MKL+ +A+R+L ++ FRVL+ +E+GM+NHE VPVELIA +A LR GG+  ILS + R  L+     A++GYRLT  GYD+LALR  ++RG +  LGRQIGVGKESD+++A  +DG EV +KFHRL
Sbjct:    1 MKLDVTAMRYLTKEHFRVLTAIEMGMKNHEIVPVELIASIAKLRHGGVQKILSHLLRNKLIAHDGNAYDGYRLTYSGYDFLALRVFLQRGHITGLGRQIGVGKESDIYLATQEDGTEVAIKFHRL 125          
BLAST of mRNA_M-pyrifera_M_contig80675.18883.1 vs. uniprot
Match: A0A0M9A813_9HYME (Non-specific serine/threonine protein kinase n=1 Tax=Melipona quadrifasciata TaxID=166423 RepID=A0A0M9A813_9HYME)

HSP 1 Score: 149 bits (377), Expect = 1.660e-40
Identity = 71/125 (56.80%), Postives = 96/125 (76.80%), Query Frame = 1
Query:    4 KLNASALRHLDRDDFRVLSGVELGMRNHEYVPVELIARVAGLRRGGIGMILSKVCRLGLLHRQR-KAFEGYRLTSQGYDYLALRALVRRGTVVALGRQIGVGKESDVFIAQSDDGDEVVVKFHRL 375
            KLN + LR+L RDDFRVL+ +E+GM+NHE VP  L A++A LR GG+  +L ++CR  LL+ +R K ++GYRLT+ GYDYLALR L +RGTV + G QIGVGKES+++I  +DDG+ V +K HRL
Sbjct:    3 KLNVTILRYLTRDDFRVLTAIEMGMKNHELVPASLAAQIANLRYGGVHKLLKELCRHRLLNYERGKHYDGYRLTNAGYDYLALRVLAQRGTVTSFGNQIGVGKESNIYIVANDDGESVCLKLHRL 127          
BLAST of mRNA_M-pyrifera_M_contig80675.18883.1 vs. uniprot
Match: A0A7S3A1J6_9RHOD (Hypothetical protein (Fragment) n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3A1J6_9RHOD)

HSP 1 Score: 140 bits (352), Expect = 1.790e-40
Identity = 64/125 (51.20%), Postives = 95/125 (76.00%), Query Frame = 1
Query:    1 MKLNASALRHLDRDDFRVLSGVELGMRNHEYVPVELIARVAGLRRGGIGMILSKVCRLGLLHRQRKAFEGYRLTSQGYDYLALRALVRRGTVVALGRQIGVGKESDVFIAQSDDGDEVVVKFHRL 375
            MKL+ +ALR+L +DD RVL+ VE+GM+NHE VP  LI  ++GLR GG+   L ++ +  LLH +++ ++GYRLT+ GYDYLAL AL +R ++  +G ++GVGKE+DV+ A++ DG+ VV+K HRL
Sbjct:    1 MKLDVTALRYLSKDDLRVLTAVEMGMKNHEMVPTTLICSISGLRYGGVDRGLRELHKHKLLHHEQRGYDGYRLTNLGYDYLALAALSKRDSITRIGNRLGVGKEADVYHAETGDGEHVVIKIHRL 125          
BLAST of mRNA_M-pyrifera_M_contig80675.18883.1 vs. uniprot
Match: K3WQ05_GLOUD (Non-specific serine/threonine protein kinase n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WQ05_GLOUD)

HSP 1 Score: 148 bits (374), Expect = 1.890e-40
Identity = 68/125 (54.40%), Postives = 92/125 (73.60%), Query Frame = 1
Query:    1 MKLNASALRHLDRDDFRVLSGVELGMRNHEYVPVELIARVAGLRRGGIGMILSKVCRLGLLHRQRKAFEGYRLTSQGYDYLALRALVRRGTVVALGRQIGVGKESDVFIAQSDDGDEVVVKFHRL 375
            MKL+ SA+R+L ++ FRVL+ +E+GM+NHE VP+ELI  +A LR GG+  ILS + R  L+      ++G+RLT  GYDYLALR  + RG +  LGRQIGVGKESD+F+A  +DG E+ +KFHRL
Sbjct:    1 MKLDVSAMRYLTKEHFRVLTAIEMGMKNHEVVPIELITSIAKLRHGGVNKILSHLLRNKLIAHDGNTYDGFRLTYSGYDYLALRVFLERGHITGLGRQIGVGKESDIFLATQEDGTEIAIKFHRL 125          
BLAST of mRNA_M-pyrifera_M_contig80675.18883.1 vs. uniprot
Match: A0A024G636_9STRA (Non-specific serine/threonine protein kinase n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024G636_9STRA)

HSP 1 Score: 148 bits (373), Expect = 2.140e-40
Identity = 72/125 (57.60%), Postives = 94/125 (75.20%), Query Frame = 1
Query:    1 MKLNASALRHLDRDDFRVLSGVELGMRNHEYVPVELIARVAGLRRGGIGMILSKVCRLGLLHRQRKAFEGYRLTSQGYDYLALRALVRRGTVVALGRQIGVGKESDVFIAQSDDGDEVVVKFHRL 375
            MKL+ SALR+L ++ FRVL+ +E+GM+NHE VPV+LIA +A LR GGI  ILS++ R  L+     ++EG+RLT  GYD+LALR  + R  V  LGRQIGVGKESD++IA  +DG EV +KFHRL
Sbjct:    1 MKLDVSALRYLTKEHFRVLTSIEMGMKNHEIVPVDLIASIAKLRAGGIQKILSQLLRHRLIAHDGDSYEGFRLTYNGYDFLALRVFLERNHVTGLGRQIGVGKESDIYIATQEDGQEVAIKFHRL 125          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig80675.18883.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2R5G1F9_9STRA3.090e-4462.40Non-specific serine/threonine protein kinase n=1 T... [more]
D0MY80_PHYIT1.590e-4156.80Non-specific serine/threonine protein kinase n=4 T... [more]
G4YME8_PHYSP1.650e-4156.80Non-specific serine/threonine protein kinase n=5 T... [more]
A0A662WQN5_9STRA2.040e-4154.40Non-specific serine/threonine protein kinase n=1 T... [more]
A0A5D6Y6L5_9STRA3.130e-4156.00Non-specific serine/threonine protein kinase n=1 T... [more]
A0A3M6VBI4_9STRA5.830e-4156.00Non-specific serine/threonine protein kinase n=1 T... [more]
A0A0M9A813_9HYME1.660e-4056.80Non-specific serine/threonine protein kinase n=1 T... [more]
A0A7S3A1J6_9RHOD1.790e-4051.20Hypothetical protein (Fragment) n=1 Tax=Rhodosorus... [more]
K3WQ05_GLOUD1.890e-4054.40Non-specific serine/threonine protein kinase n=1 T... [more]
A0A024G636_9STRA2.140e-4057.60Non-specific serine/threonine protein kinase n=1 T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig80675contigM-pyrifera_M_contig80675:3..377 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score154.8
Seed ortholog evalue2.6e-35
Seed eggNOG ortholog42099.EPrPV00000020991
KEGG koko:K07179
KEGG Pathwayko03008,map03008
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0004672,GO:0006464,GO:0006468,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019538,GO:0036211,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0071704,GO:0140096,GO:1901564
EggNOG free text desc.RIO kinase. Source PGD
EggNOG OGs1MEZZ@121069,COG0478@1,KOG2268@2759
EC2.7.11.1
COG Functional cat.T
Best tax levelPythiales
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko01001,ko03009
Exons1
Model size375
Cds size375
Stop0
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816711.8553143-CDS-M-pyrifera_M_contig80675:2..3771622816711.8553143-CDS-M-pyrifera_M_contig80675:2..377Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig80675 3..377 -
1692278134.7639177-CDS-M-pyrifera_M_contig80675:2..3771692278134.7639177-CDS-M-pyrifera_M_contig80675:2..377Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig80675 3..377 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig80675.18883.1prot_M-pyrifera_M_contig80675.18883.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig80675 3..377 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig80675.18883.1

>prot_M-pyrifera_M_contig80675.18883.1 ID=prot_M-pyrifera_M_contig80675.18883.1|Name=mRNA_M-pyrifera_M_contig80675.18883.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=125bp
MKLNASALRHLDRDDFRVLSGVELGMRNHEYVPVELIARVAGLRRGGIGM
ILSKVCRLGLLHRQRKAFEGYRLTSQGYDYLALRALVRRGTVVALGRQIG
VGKESDVFIAQSDDGDEVVVKFHRL
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mRNA from alignment at M-pyrifera_M_contig80675:3..377-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig80675.18883.1 ID=mRNA_M-pyrifera_M_contig80675.18883.1|Name=mRNA_M-pyrifera_M_contig80675.18883.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=375bp|location=Sequence derived from alignment at M-pyrifera_M_contig80675:3..377- (Macrocystis pyrifera P11B4 male)
ATGAAGCTGAATGCGTCGGCTCTTCGCCATTTGGACCGTGATGATTTTCG TGTATTATCTGGTGTAGAGCTTGGGATGCGAAATCACGAATATGTACCAG TTGAGTTGATTGCTCGAGTTGCAGGGTTGCGAAGAGGAGGAATTGGGATG ATTTTGAGCAAAGTTTGTCGCCTCGGCTTGTTGCACCGCCAGAGGAAGGC ATTTGAAGGTTATCGCTTAACATCACAAGGGTATGACTATTTGGCACTGC GTGCATTAGTGCGGCGTGGCACAGTGGTGGCGCTGGGTCGCCAAATTGGG GTTGGAAAAGAAAGTGACGTGTTTATCGCCCAATCAGATGATGGTGATGA AGTTGTGGTCAAGTTTCATCGATTG
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig80675:3..377-

>mRNA_M-pyrifera_M_contig80675.18883.1 ID=mRNA_M-pyrifera_M_contig80675.18883.1|Name=mRNA_M-pyrifera_M_contig80675.18883.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=750bp|location=Sequence derived from alignment at M-pyrifera_M_contig80675:3..377- (Macrocystis pyrifera P11B4 male)
ATGAAGCTGAATGCGTCGGCTCTTCGCCATTTGGACCGTGATGATTTTCG
TGTATTATCTGGTGTAGAGCTTGGGATGCGAAATCACGAATATGTACCAG
TTGAGTTGATTGCTCGAGTTGCAGGGTTGCGAAGAGGAGGAATTGGGATG
ATTTTGAGCAAAGTTTGTCGCCTCGGCTTGTTGCACCGCCAGAGGAAGGC
ATTTGAAGGTTATCGCTTAACATCACAAGGGTATGACTATTTGGCACTGC
GTGCATTAGTGCGGCGTGGCACAGTGGTGGCGCTGGGTCGCCAAATTGGG
GTTGGAAAAGAAAGTGACGTGTTTATCGCCCAATCAGATGATGGTGATGA
AGTTGTGGTCAAGTTTCATCGATTGATGAAGCTGAATGCGTCGGCTCTTC
GCCATTTGGACCGTGATGATTTTCGTGTATTATCTGGTGTAGAGCTTGGG
ATGCGAAATCACGAATATGTACCAGTTGAGTTGATTGCTCGAGTTGCAGG
GTTGCGAAGAGGAGGAATTGGGATGATTTTGAGCAAAGTTTGTCGCCTCG
GCTTGTTGCACCGCCAGAGGAAGGCATTTGAAGGTTATCGCTTAACATCA
CAAGGGTATGACTATTTGGCACTGCGTGCATTAGTGCGGCGTGGCACAGT
GGTGGCGCTGGGTCGCCAAATTGGGGTTGGAAAAGAAAGTGACGTGTTTA
TCGCCCAATCAGATGATGGTGATGAAGTTGTGGTCAAGTTTCATCGATTG
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