mRNA_M-pyrifera_M_contig80550.18864.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig80550.18864.1 vs. uniprot
Match: A0A2R6QC57_ACTCC (Two pore calcium channel protein like n=2 Tax=Actinidia chinensis var. chinensis TaxID=1590841 RepID=A0A2R6QC57_ACTCC) HSP 1 Score: 70.5 bits (171), Expect = 4.670e-10 Identity = 64/278 (23.02%), Postives = 121/278 (43.53%), Query Frame = 1 Query: 1 FLNVGQGLYHLYNLLNKTEWPSAMLPFYGREEWAGLFFVAFLLAGHFLLFRLLLAVVYADFKAYCTSAYIRRQRRSRAAFAAAFRLVSRG--GYVS----LPVWRILAQ-RVRASLPGAPIDAIFRAVGGESGF-LGRSGFVAACTLLDVKVERMELPIPASSLPTNPASPRALAIQGWQRFLRRVFASLAYEIVASAFVLAAAVIALLQSEPLTNDRFAKDTQGRDQFQADVQAASICVAFLFLLELLLKVFALGARRYWRDGFNKVDAVVVAVVFV 810 F + G L+ ++ L + P +P Y W LFFV ++L G + + L+LAVVY FK+ T + + R + AF LV + GY++ + ++ L + R + + IF + F + F C + ++ ++ ++P PT S + ++ + R + + +VAS VL + + + + N Q Q +L+++E++LK++A G YWRDG N+ D ++ V+ + Sbjct: 258 FTSFGTTLWQMFVLFTTSNNPDVWIPAYKDSRWDCLFFVLYVLLGVYFVTNLILAVVYDSFKSELTKQVVEKDRTRKRILEKAFNLVDKNNLGYLNKDQCIHLFEELNKYRTLPKISREDFELIFDELDDSHDFKINWDEFADLCNAIALQFQKEDVPSIFEKFPTIYHSSFSETLKSFVRGPKFRY------VVASILVLNLVAVVIETTLDIENS----------SAQKFWQKLEFIFGWLYVVEMVLKIYAYGFENYWRDGQNRFDFIITLVIVI 519
BLAST of mRNA_M-pyrifera_M_contig80550.18864.1 vs. uniprot
Match: A0A7C9CKB6_OPUST (Uncharacterized protein n=2 Tax=Opuntia streptacantha TaxID=393608 RepID=A0A7C9CKB6_OPUST) HSP 1 Score: 69.7 bits (169), Expect = 8.440e-10 Identity = 65/276 (23.55%), Postives = 114/276 (41.30%), Query Frame = 1 Query: 1 FLNVGQGLYHLYNLLNKTEWPSAMLPFYGREEWAGLFFVAFLLAGHFLLFRLLLAVVYADFKAYCTSAYIRRQRRSRAAFAAAFRLVSRG--GYVSLPVWRILAQ-----RVRASLPGAPIDAIFRAVGGESGF-LGRSGFVAACTLLDVKVERMELPIPASSLPTNPASPRALAIQGWQRFLRRVFASLAYEIVASAFVLAAAVIALLQSEPLTNDRFAKDTQGRDQFQADVQAASICVAFLFLLELLLKVFALGARRYWRDGFNKVDAVVVAVV 804 F + G LY ++ L + P +P Y W LFFV ++L G + + L+LAVVY FK+ + + + AFRL+ GY+ L + R + IF + F + F C + +K + E P + P+ S + ++ + R VF ++ A +L +IA++ L + D Q Q +++++E++LK++A G YWRDG N+ D ++ V+ Sbjct: 252 FTSYGTTLYQMFVLFTTSNNPDVWIPAYKVSRWYSLFFVLYILLGVYFVTNLILAVVYDSFKSELAKQVAEKDNKRKRILLKAFRLIDSNNHGYLDKEQCMHLFEELNKYRTLPKISKQDFGLIFDELDDSGDFKIDSDEFADLCHAIALKFAKEECPSCFEACPSIYHSTISKKLKAFVR--SSVFGNII------AIILVINLIAVIIETTLDIED--------DSSQKSWQVVEFVFGWIYVIEMVLKIYAYGFVNYWRDGQNRFDFIITCVI 511
BLAST of mRNA_M-pyrifera_M_contig80550.18864.1 vs. uniprot
Match: A0A482UM59_9ARCH (Ion transporter (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482UM59_9ARCH) HSP 1 Score: 68.6 bits (166), Expect = 1.590e-9 Identity = 53/166 (31.93%), Postives = 77/166 (46.39%), Query Frame = 1 Query: 301 LAQRVRASLPGAPIDAIFRAVGGESGFLGRSGFVAACTLLDVKVERMELPIPASSLPTNPASPRALAIQGWQRFLRRVFASLAYEIVASAFVLAAAVIALLQSEPLTNDRFAKDTQGRDQFQADVQAASICVAFLFLLELLLKVFALGARRYWRDGFNKVDAVVVA 798 LA+RV P +D IF AVGG+ G++ FVAACTLLDV RM + R L + R R+ + + I + +A I L + L N +A + + +F E +LKVF +G +RYW DGFN++D +V+A Sbjct: 9 LAKRVHRKQPREVVDIIFHAVGGQVGYIDAQCFVAACTLLDVIPSRMVI--------------RDLDVTV-DRVRYRIARFMNHPIFCALLDVAIITIGLTELI-LDNSSYASADEAAXXXXXXXXXXXX-ILLVFCAECVLKVFGMGLKRYWADGFNRLDVLVIA 157
BLAST of mRNA_M-pyrifera_M_contig80550.18864.1 vs. uniprot
Match: A0A7N0UKT4_KALFE (Uncharacterized protein n=1 Tax=Kalanchoe fedtschenkoi TaxID=63787 RepID=A0A7N0UKT4_KALFE) HSP 1 Score: 65.1 bits (157), Expect = 2.960e-8 Identity = 65/283 (22.97%), Postives = 117/283 (41.34%), Query Frame = 1 Query: 1 FLNVGQGLYHLYNLLNKTEWPSAMLPFYGREEWAGLFFVAFLLAGHFLLFRLLLAVVYADFKAYCTSAYIRRQRRSRAAFAAAFRLVSRG--GYVS----------LPVWRILAQRVRASLPGAPIDAIFRAVGGESGF-LGRSGFVAACTLLDVKVERMELPIPASSLPTNPASPRALAIQGWQRFLRRVFASLAYEIVASAFVLAAAVIALLQSEPLTNDRFAKDTQGRDQFQADVQAASICVAFLFLLELLLKVFALGARRYWRDGFNKVDAVVVAVVFV 810 F + G LY ++ L + P +P Y W LFF+ ++L G + + L+LAVVY FK+ + A AF L+ + GY+ L +R L + R + IF + F + F C + ++ ++ + P P SP + ++ + R + Y I AF+L ++A++ L + Q+ Q +++++E+ LKV+ALG YWRDG N+ D ++ ++ + Sbjct: 252 FPSYGITLYKMFILFTTSNNPDVWIPAYKASRWYSLFFILYILLGVYFVTNLILAVVYDSFKSQLAKQVSEMDSMRKKNLAKAFNLLDKQNVGYLDKEQCIHLFEELNKYRTLPKTSREEF-----ELIFDELDDSHDFKINLDEFTDLCNAISLRFQKEDTPSWFEKYPYIYHSPFSQKLKAFVRG-----PTFGYII---AFILLLNLVAVIIETTLDIEN--------SSAQSVWQGVEFIFGWIYVIEMALKVYALGFENYWRDGQNRFDFIITWIIVI 513
BLAST of mRNA_M-pyrifera_M_contig80550.18864.1 vs. uniprot
Match: A0A8C3W1Y5_9CETA (Uncharacterized protein n=1 Tax=Catagonus wagneri TaxID=51154 RepID=A0A8C3W1Y5_9CETA) HSP 1 Score: 65.1 bits (157), Expect = 2.970e-8 Identity = 76/275 (27.64%), Postives = 113/275 (41.09%), Query Frame = 1 Query: 1 FLNVGQGLYHLYNLLNKTEWPSAMLPFYGREEWAGLFFVAFLLAGHFLLFRLLLAVVYADFKAYCT----SAYIRRQRRSRAAFAAAFRLVSRGGYVSLPVWRILAQRVRASLPGAPIDAIFRAVGGESGFLGRSGFVAACTLLDVKVERMELPIPASSLPTNPASPRALAIQGWQRFLRRVFASLAYEIVASAFVLAAAVIALLQSEPLTNDRFAKDTQGRDQFQADVQAASICVAFLF-LLELLLKVFALGARRYWRDGFNKVDAVVVAVVFV 810 F N+ + L L LL P M+P Y + +FF+AF L G LL LL A++Y F+ Y ++ +RR+ +RAA+ L G V + +L + L +AI + L F D KV + P P +P RA + G + F ++A ++ V +L ++ L +R D F V CV L+ LLE+LLKVFALG R Y N D ++ V+ V Sbjct: 256 FRNLPEALTSLLVLLTTANNPDVMIPAYSKNRAYAVFFIAFTLIGSLLLMNLLTAIIYNQFRGYLMKSLQTSLLRRRLGTRAAYKVLSSLTPEG--VGVKPRDVLQVLQKVQLDSDHKEAIVEKLHSRGDLLSAGEFQELFDTFDKKVAKERPPRPEYQ---SPFLRRAQLLFGHRHF------DCLGNLMALGNLVTICVFLVLDADVLPEER--------DDF---VLGILNCVFILYYLLEMLLKVFALGLRGYLDSPSNVFDGLLTVVLLV 508
BLAST of mRNA_M-pyrifera_M_contig80550.18864.1 vs. uniprot
Match: A0A8B8KJW0_ABRPR (two pore calcium channel protein 1 isoform X1 n=5 Tax=Abrus precatorius TaxID=3816 RepID=A0A8B8KJW0_ABRPR) HSP 1 Score: 64.3 bits (155), Expect = 5.350e-8 Identity = 67/280 (23.93%), Postives = 114/280 (40.71%), Query Frame = 1 Query: 1 FLNVGQGLYHLYNLLNKTEWPSAMLPFYGREEWAGLFFVAFLLAGHFLLFRLLLAVVYADFKAYCTSAYIRRQRRSRAAFAAAFRLVSRG--GYVS----LPVWRILAQ-RVRASLPGAPIDAIFRAVGGESGF-LGRSGFVAACTLLDVKVERMELPIPASSLPT--NPASPRALAIQGWQRFLRRVFASLAYEIVASAFVLAAAVIALLQSEPLTNDRFAKDTQGRDQFQADVQAASICVAFLFLLELLLKVFALGARRYWRDGFNKVDAVVVAVVFV 810 F + G LY ++ L + P +P Y W LFF+ F+L G + + L+LAVVY FK+ + R R AF L+ GY++ + ++ L + R + + IF + + R F C + +K ++ + P L +P S R A F V +FVL +IA++ L + Q Q +++++E++LKV+A G YWRDG N+ D ++ + + Sbjct: 251 FTSYGTTLYQMFLLFTTSNSPDVWVPAYKSSRWYCLFFIFFVLVGVYFVTNLILAVVYDSFKSELVKQVFEKDRMRRTMLEKAFSLLDAHNLGYLNKDQCIRLFEELNKYRTLPKISKEEFELIFDELDDSHDVKINRDEFADICNAIALKFQKEDTPSYFEYLAFYHSPYSKRLKAFVKSPMFGYLV-----------SFVLILNLIAVIVETTLDI--------ANNSGQKVWQVVEFIFGWIYVIEMILKVYAYGFANYWRDGQNRFDFIITVTIVI 511
BLAST of mRNA_M-pyrifera_M_contig80550.18864.1 vs. uniprot
Match: A0A8C3YES0_9CETA (Uncharacterized protein n=1 Tax=Catagonus wagneri TaxID=51154 RepID=A0A8C3YES0_9CETA) HSP 1 Score: 63.9 bits (154), Expect = 6.510e-8 Identity = 75/273 (27.47%), Postives = 112/273 (41.03%), Query Frame = 1 Query: 1 FLNVGQGLYHLYNLLNKTEWPSAMLPFYGREEWAGLFFVAFLLAGHFLLFRLLLAVVYADFKAYCT----SAYIRRQRRSRAAFAAAFRLVSRGGYVSLPVWRILAQRVRASLPGAPIDAIFRAVGGESGFLGRSGFVAACTLLDVKVERMELPIPASSLPTNPASPRALAIQGWQRFLRRVFASLAYEIVASAFVLAAAVIALLQSEPLTNDRFAKDTQGRDQFQADVQAASICVAFLF-LLELLLKVFALGARRYWRDGFNKVDAVVVAVV 804 F N+ + L L LL P M+P Y + +FF+AF L G LL LL A++Y F+ Y ++ +RR+ +RAA+ L G V + +L + L +AI + L F D KV + P P +P RA + G + F ++A ++ V +L ++ L +R D F V CV L+ LLE+LLKVFALG R Y N D ++ V+ Sbjct: 256 FRNLPEALTSLLVLLTTANNPDVMIPAYSKNRAYAVFFIAFTLIGSLLLMNLLTAIIYNQFRGYLMKSLQTSLLRRRLGTRAAYKVLSSLTPEG--VGVKPRDVLQVLQKVQLDSDHKEAIVEKLHSRGDLLSAGEFQELFDTFDKKVAKERPPRPEYQ---SPFLRRAQLLFGHRHF------DCLGNLMALGNLVTICVFLVLDADVLPEER--------DDF---VLGILNCVFILYYLLEMLLKVFALGLRGYLDSPSNVFDGLLTVVL 506
BLAST of mRNA_M-pyrifera_M_contig80550.18864.1 vs. uniprot
Match: A0A8C3W0R7_9CETA (Uncharacterized protein n=1 Tax=Catagonus wagneri TaxID=51154 RepID=A0A8C3W0R7_9CETA) HSP 1 Score: 63.9 bits (154), Expect = 6.620e-8 Identity = 75/273 (27.47%), Postives = 112/273 (41.03%), Query Frame = 1 Query: 1 FLNVGQGLYHLYNLLNKTEWPSAMLPFYGREEWAGLFFVAFLLAGHFLLFRLLLAVVYADFKAYCT----SAYIRRQRRSRAAFAAAFRLVSRGGYVSLPVWRILAQRVRASLPGAPIDAIFRAVGGESGFLGRSGFVAACTLLDVKVERMELPIPASSLPTNPASPRALAIQGWQRFLRRVFASLAYEIVASAFVLAAAVIALLQSEPLTNDRFAKDTQGRDQFQADVQAASICVAFLF-LLELLLKVFALGARRYWRDGFNKVDAVVVAVV 804 F N+ + L L LL P M+P Y + +FF+AF L G LL LL A++Y F+ Y ++ +RR+ +RAA+ L G V + +L + L +AI + L F D KV + P P +P RA + G + F ++A ++ V +L ++ L +R D F V CV L+ LLE+LLKVFALG R Y N D ++ V+ Sbjct: 256 FRNLPEALTSLLVLLTTANNPDVMIPAYSKNRAYAVFFIAFTLIGSLLLMNLLTAIIYNQFRGYLMKSLQTSLLRRRLGTRAAYKVLSSLTPEG--VGVKPRDVLQVLQKVQLDSDHKEAIVEKLHSRGDLLSAGEFQELFDTFDKKVAKERPPRPEYQ---SPFLRRAQLLFGHRHF------DCLGNLMALGNLVTICVFLVLDADVLPEER--------DDF---VLGILNCVFILYYLLEMLLKVFALGLRGYLDSPSNVFDGLLTVVL 506
BLAST of mRNA_M-pyrifera_M_contig80550.18864.1 vs. uniprot
Match: A0A0L9VJD9_PHAAN (EF-hand domain-containing protein n=4 Tax=Vigna TaxID=3913 RepID=A0A0L9VJD9_PHAAN) HSP 1 Score: 62.8 bits (151), Expect = 1.740e-7 Identity = 63/280 (22.50%), Postives = 112/280 (40.00%), Query Frame = 1 Query: 1 FLNVGQGLYHLYNLLNKTEWPSAMLPFYGREEWAGLFFVAFLLAGHFLLFRLLLAVVYADFKAYCTSAYIRRQRRSRAAFAAAFRLVSR---GGYVSLPVWRILAQ----RVRASLPGAPIDAIFRAVGGESGF-LGRSGFVAACTLLDVKVERMELPIPASSLPTNPASPRALAIQGW--QRFLRRVFASLAYEIVASAFVLAAAVIALLQSEPLTNDRFAKDTQGRDQFQADVQAASICVAFLFLLELLLKVFALGARRYWRDGFNKVDAVVVAVVFV 810 F + G LY ++ L + P +P Y W LFFV F+L G + + L+LAVVY FK+ + R AF L+ G R+ + R + + IF + + + F C + +K ++ ++ + LA W + L+ S + + S F+L ++A++ L + + Q Q +++++E+LLKV+A G YWRDG N+ D V+ ++ + Sbjct: 250 FTSYGATLYQMFLLFTTSNNPDVWVPAYKSSRWYCLFFVLFVLVGVYFVTNLILAVVYDSFKSELVKQVFEKDLLRRTMLDKAFNLLDTLNIGALNKNQCIRLFEELNKYRTLPKISSEEFELIFDELDDSHDIKINKDEFADICNAIALKFQKEDVM----------SYFEYLAFYDWPSSKTLKEFVKSAMFGYIVS-FILIVNLVAVIIETTLDIEN--------NSGQKVWQVVEFIFGWIYVVEMLLKVYAYGFENYWRDGQNRFDFVITVIIVI 510
BLAST of mRNA_M-pyrifera_M_contig80550.18864.1 vs. uniprot
Match: A0A068V1Y4_COFCA (EF-hand domain-containing protein n=6 Tax=Coffea TaxID=13442 RepID=A0A068V1Y4_COFCA) HSP 1 Score: 62.4 bits (150), Expect = 2.340e-7 Identity = 66/278 (23.74%), Postives = 112/278 (40.29%), Query Frame = 1 Query: 1 FLNVGQGLYHLYNLLNKTEWPSAMLPFYGREEWAGLFFVAFLLAGHFLLFRLLLAVVYADFKAYCTSAYIRRQRRSRAAFAAAFRLVSRGGYVSLPVWRILA-------QRVRASLPGAPIDAIFRAVGGESGF-LGRSGFVAACTLLDVKVERMELPIPASSLPTNPASPRALAIQGWQRFLRRVFASLAYEIVASAFVLAAAVIALLQSEPLTNDRFAKDTQGRDQFQADVQAASICVAFLFLLELLLKVFALGARRYWRDGFNKVDAVVVAVVFV 810 F + G LY ++ L + P +P Y W LFFV F+L G + + L+LAVVY FK + R + AF L L + + R + + IF + F + + F C + ++ ++ P+ SP + ++ + R + Y + AF+L ++A++ L D + QA Q ++++LE+LLK++A G YWRDG N+ D +V V+ V Sbjct: 256 FTSYGMTLYQMFVLFTTSNNPDVWIPAYKASRWYCLFFVLFVLLGVYFVTNLILAVVYDSFKNELVKQVAEKDRLRIRTLSKAFTLADTYNLGFLDKDQCIRLFEELNKYRTLPKISKEDFELIFDELDDSHDFKINLNEFADLCNAIALRFQKENSEPIFEKCPSIYHSPVSERLKNFVRS-----PTFGYIV---AFILVLNLVAVIIETTL-------DIEDNSAQQA-WQKVEFVFGWIYVLEMLLKIYAYGFENYWRDGQNRFDFIVTLVIVV 517 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig80550.18864.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig80550.18864.1 >prot_M-pyrifera_M_contig80550.18864.1 ID=prot_M-pyrifera_M_contig80550.18864.1|Name=mRNA_M-pyrifera_M_contig80550.18864.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=270bp FLNVGQGLYHLYNLLNKTEWPSAMLPFYGREEWAGLFFVAFLLAGHFLLFback to top mRNA from alignment at M-pyrifera_M_contig80550:123..932+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig80550.18864.1 ID=mRNA_M-pyrifera_M_contig80550.18864.1|Name=mRNA_M-pyrifera_M_contig80550.18864.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=810bp|location=Sequence derived from alignment at M-pyrifera_M_contig80550:123..932+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig80550:123..932+ >mRNA_M-pyrifera_M_contig80550.18864.1 ID=mRNA_M-pyrifera_M_contig80550.18864.1|Name=mRNA_M-pyrifera_M_contig80550.18864.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1620bp|location=Sequence derived from alignment at M-pyrifera_M_contig80550:123..932+ (Macrocystis pyrifera P11B4 male)back to top |