mRNA_M-pyrifera_M_contig80476.18845.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig80476.18845.1 vs. uniprot
Match: E0MS97_9HYPH (MscS mechanosensitive ion channel n=2 Tax=Ahrensia sp. R2A130 TaxID=744979 RepID=E0MS97_9HYPH) HSP 1 Score: 207 bits (527), Expect = 1.670e-57 Identity = 131/344 (38.08%), Postives = 182/344 (52.91%), Query Frame = 1 Query: 1 FFVMAMAVAFALDTGHEPSRRIIFEIVVAYLFYRLMIRAVSWNLFAYDAPSHRIVNLSDDEANRLHRDWGIAVAVVVIFAAGARSLSFIGQEQGYAGLTVENIL------FIQICTACLATLVLAILDLKNWKIWQHIFEPRAKSAWLYRLRATLARSVPVVFLVYMLIALGVFIYRLALGLTDPGAVIAAPFVVFWAALMTYGLVIIGIQALYNRRIRYFEERAAAEQER------LAKEAGTVDIDS-----------GEEMVVGPSSA--------NFEYQPVFKPFFEMAALAIIATIAVGELIRSWGVDLNSDGNFWSSLLDIILASVLCWLAYRAVSL 939 F V+A +A L G +R + EI++AY YR++ VSWNL AYDAP HR+VNLSD+EA R+H W + VA+V++ A R IG G +L + I A A +L ++ + NW+ H+ P + Y+ R LAR VP ++Y + A +F +R+A + GA I PFVV +AAL+ G+ ++ IQ LY RR + F ER A E ER +A A D D GEEM+V + A FEYQP+ + E + AI+ A+GEL R WG+D+ + N+W+S LDIIL S L W AYRAV L Sbjct: 147 FVVIAGIIAILLHNGDPRTRIVTVEIIIAYAIYRMLRYGVSWNLLAYDAPKHRLVNLSDEEAKRMHLHWWVMVALVLVATAITRFFVLIGFNSGNGEFNGNGLLSLGEAQLLYIFNAGFAVSMLILITVINWRALSHVVAPSSAGMAFYKARTNLARLVPPFIVIYAIAAFVMFTWRVASLQPNAGAFIIGPFVVSYAALIAQGVALLVIQLLYQRREQKFYERQAMELERQREQAAIAAAAMRADYDGEEEDDVIPPQEGEEMLVAEAGAPPAEEAEVQFEYQPLLRGLIERSVGAIVIVFALGELGRIWGIDVMAQNNWWASFLDIILVSALGWFAYRAVGL 490
BLAST of mRNA_M-pyrifera_M_contig80476.18845.1 vs. uniprot
Match: A0A7R7CDT0_9HYPH (Uncharacterized protein n=2 Tax=unclassified Mesorhizobium TaxID=325217 RepID=A0A7R7CDT0_9HYPH) HSP 1 Score: 149 bits (377), Expect = 1.040e-36 Identity = 115/339 (33.92%), Postives = 166/339 (48.97%), Query Frame = 1 Query: 4 FVMAMAVAFALDTGHEPSRRIIFEIVVAYLFYRLMIRAVSWNLFAYDAPSHRIVNLSDDEANRLHRDWGIAVAVVVIFAAGARSLSFIG-QEQGYAGLTVENILFIQICTACLATLVLAILDLKNWKIWQHIF----EPRAKSAWLYRLRATLARSVPVVFLVYMLIALGVFIYRLALGLTDPGAVIAAPFVVFWAALMTYGLVIIGIQALYNRRIRYFEERAAAE--------------QERLAK--EAGTVDIDSGEEMVV------GPSSANFEYQPVFKPFFEMAALAIIATIAVGELIRSWGVDLNS-DGNFWSSLLDIILASVLCWLAYRAVS 936 FV+AM VA DTGH P+R+ F I+ + YR+M + WN FA D P+HR++N+ DD A RLHRDW +AV + A R +G ++ Y + FI C ++ AI + + K I +P AK AW + ARS +V L Y IA + RL LGL ++AAP +VF A+ YG+ I+ + +Y R F R A E +ERLA+ E ++ GEE+ V P++ ++ PVFK FFE A + ++ L R WG++L DGN + LDI+L + AY AV+ Sbjct: 198 FVVAMGVALIFDTGHAPTRKTTFLIISTFAIYRIMRSVILWNFFAPDTPAHRLINVDDDAARRLHRDWSAVLAVAAVIIAFCRWAQLMGVSDETY------RLSFIVAMLVC--AVMFAISAIAHRKELHSILLGKGDPAAKPAW----QRFFARSALLVVLGYFGIAWFMSSLRLILGLPGGYILVAAPLLVFIVAIFAYGVAILILDNIYERLELSFYRRLAREDAAERNARRRDEQAKERLAQLSEHERDILEEGEEITVYKPELLAPTNRPRKFVPVFKSFFENVIFAAVVIFSIAILARLWGIELERVDGNPLVAALDILLVLFIAGSAYNAVN 524
BLAST of mRNA_M-pyrifera_M_contig80476.18845.1 vs. uniprot
Match: A0A5B8L689_9HYPH (Mechanosensitive ion channel family protein n=2 Tax=Nitratireductor sp. SY7 TaxID=2599600 RepID=A0A5B8L689_9HYPH) HSP 1 Score: 148 bits (374), Expect = 2.140e-36 Identity = 122/345 (35.36%), Postives = 169/345 (48.99%), Query Frame = 1 Query: 4 FVMAMAVAFALDTGHEPSRRIIFEIVVAYLFYRLMIRAVSWNLFAYDAPSHRIVNLSDDEANRLHRDWGIAVAVVVIFAAGARSLSFIGQEQGYAGLTVENI----------LFIQICTACLATLVLAILDLKNWK-IWQHIFEPRAKSAWLYRLRATLARSVPVVFLVYMLIALGVFIYRLALGLTDPGAVIAAPFVVFWAALMTYGLVIIGIQALYNRRIRYFEERAAA--EQER---------------LAKEAGTVDIDSGEEM-----VVGPSSANFEYQPVFKPFFEMAALAIIATIAVGELIRSWGVDLNSDGNF-WSSLLDIILASVLCWLAYRAVS 936 FV A+ VA D+GHEPSR IF IV Y+ YR++ V WN FA + +HR+VNLSD +A L R W A+AV I R + +G AG + I + + +C A LA +LAI+ + K I E + K WL + T ++P++ L+Y+ +A V RL LGL + AP +VF A+ Y + I+ +Y RR E R A E ER L++E V ++ G EM V P S Y P FK FFE A I ++ GEL R WGVD+ DG +S LDI+L +++ AYRAV+ Sbjct: 111 FVTAILVAVIFDSGHEPSRATIFVIVSTYVVYRILRGVVFWNFFAPTSSAHRLVNLSDAQAQSLFRHWAAALAVGAIIIGLCRWVQILGANGAEAGTAMAQINDDAHRLAFIVGLFVCAALLA--LLAIIHRRELKAIILGPGEVKEKPGWLRTIAFT---ALPLI-LLYLALAWFVSSVRLTLGLPGGYIPVLAPIIVFVVAIFAYAVAAYLIEVIYERRAAAHERRELARLEAERRAWERTQASREMMSELSEETQEV-LEEGAEMTMMHSVSAPDSQIRPYFPAFKRFFENCVAATILVVSAGELSRLWGVDIGRDGGHPLASALDILLVAIIAASAYRAVN 448
BLAST of mRNA_M-pyrifera_M_contig80476.18845.1 vs. uniprot
Match: A0A1L3SW27_9HYPH (Uncharacterized protein n=2 Tax=Aquibium oceanicum TaxID=1670800 RepID=A0A1L3SW27_9HYPH) HSP 1 Score: 144 bits (362), Expect = 1.060e-34 Identity = 114/341 (33.43%), Postives = 169/341 (49.56%), Query Frame = 1 Query: 4 FVMAMAVAFALDTGHEPSRRIIFEIVVAYLFYRLMIRAVSWNLFAYDAPSHRIVNLSDDEANRLHRDWGIAVAVVVIFAAGARSLSFIGQEQGYAGLTV-------ENILFIQICTACLATLVLAILDLKNWKIWQHIFEPRAKSAWLYRLR-ATLARSVPVVFLVYMLIALGVFIYRLALGLTDPGAVIAAPFVVFWAALMTYGLVIIGIQALYNRRI--------------RYFEERAAAEQERLAKEAGTVD--IDSGEEMVV-----GPSSANFEYQPVFKPFFEMAALAIIATIAVGELIRSWGVDLNSDGNFW-SSLLDIILASVLCWLAYRAVS 936 FV A+ VA DTGHEPSR IF I+ Y+ YR++ + WN FA A +HR++NLSD+ A RL RDW I +AV R + + +G G+++ +N+ FI C L++A + L++ K I R ++ LR AT+ ++P L+Y++ A V RL LG + AP +VF A + Y + ++ LY RR R RA A +E +A+ V ++ G+EM V P++ Y P FK FF+ + A I + GEL R WG DL +G W +S LDI+L ++ YRAV+ Sbjct: 188 FVTAVLVAVIFDTGHEPSRTTIFVIISTYVAYRILRTVIFWNFFAPGASAHRLINLSDEAAERLFRDWAIILAVGATIIGLCRWILVLPPPEGVVGMSMVAVNHDAQNMAFILGMLIC--ALMMAGMALRHNKELNEIVLGRDETTRKSPLRRATVFLALPAT-LIYLVFAWLVSSVRLTLGHPGGYVPVLAPILVFVAGVFAYAVAAYLLEILYERRAASHRRRQLLKLQAERRAWRRAEASKEMMAEMNEDVREMLEDGDEMTVMAPVSRPTTTIQPYFPAFKEFFQNSIQATILVVCCGELARLWGADLGREGGHWFASSLDILLVIIVAASLYRAVN 525
BLAST of mRNA_M-pyrifera_M_contig80476.18845.1 vs. uniprot
Match: A0A8J5ACY0_9CHEL (Small-conductance mechanosensitive channel n=1 Tax=Nymphon striatum TaxID=424472 RepID=A0A8J5ACY0_9CHEL) HSP 1 Score: 136 bits (342), Expect = 3.360e-32 Identity = 105/332 (31.63%), Postives = 161/332 (48.49%), Query Frame = 1 Query: 10 MAMAVAFALDTGHEPSRRIIFEIVVAYLFYRLMIRAVSWNLFAYDAPSHRIVNLSDDEANRLHRDWGIAVAVVVIFAAGARSLSFIGQEQGYAGLTVENILFIQICTACLATLVLAIL------DLKNWKIWQHIFEPRAKSAWLYRLRATLARSVPVVFLVYMLIALGVFIYRLALGLTDPGAVIAAPFVVFWAALMTYGLVIIGIQALYNRRIRYFEERAAA---------EQERLAKEAGTV---DIDSGEEMVVGP--SSANFEYQPVFKPFF----EMAALAIIATIAVGELIRSWGVDLNSDGNFWSSLLDIILASVLCWLAYRAV 933 +A+ VA D+ H PSR I I+ AY+ Y++ + +NL A DAPSHR++NL D+ A+R+ + W VV+ ++ L+FIG L V LF L+ L+ IL D+KN + + EP K W R LA V+ + Y+ IA + YR+ L L D ++I +P A+ Y +++I I Y R + FEER + E+E+ A EA D D EE+++ ++ E PVFKP F E AA +I A G ++ +W V++ GN + +D ++ + W YRAV Sbjct: 165 VALIVALVFDSEHSPSRVTIAVIIGAYIAYKIFRHVILFNLIAPDAPSHRMINLDDEAADRMQKQWRRVALTVVLLSSFFVWLAFIGLRGDTLKLVVITCLF-------LSALMFGILAFRDRADIKNIILGKG--EPSNKPIW----RRILASQAFVMLIAYLAIAWVISAYRILLNLPDSLSIIGSPITALILAVTAYSVILIVIDRFYVARQKRFEERVSLAHEQAKQKHEEEKAAIEAAMASDADSDDDEELIINRMMNANELEAMPVFKPIFKSLMETAAGIMITIFAFGFILSNWDVNIGQTGNPITEFMDTLIIIFVAWFMYRAV 483
BLAST of mRNA_M-pyrifera_M_contig80476.18845.1 vs. uniprot
Match: A0A0M6ZP80_9HYPH (Putative MscS family protein YfkC n=1 Tax=Roseibium album TaxID=311410 RepID=A0A0M6ZP80_9HYPH) HSP 1 Score: 82.8 bits (203), Expect = 7.690e-14 Identity = 83/324 (25.62%), Postives = 155/324 (47.84%), Query Frame = 1 Query: 1 FFVMAMAVAFALDTGHEPSRR---IIFEIVVAYLFYRLMIRAVSWNLFAYDAPSHRIVNLSDDEANRLHRDWGIAVAVVVIFAAGARSLSFIGQEQGYAGLTVENILFIQICTACLATLVLAILDLKNWKIWQHIFEPRAKS---AWLYRLRATLARSVPVVFLVYMLIALGVFIYRLALGLTDPGAVIAAPFVVFWAALMTYGLVIIGIQALYNRRIRYFEERAA-AEQERLAKEA--GTVDIDSGEEMVVGPSSANFEYQPVFKPFFEMAALAIIATIAVGELIRSWGVDLNSDGNFWSSLLDIILASVLCWLAYRAVSLLI 945 FF +A+ V + TG + + + +IF ++ A+L +R+ + NL A DA SHR++NLS +EA L+R +A + V +F+ G + E+ GL+++ I + L+ ++L + + K + A+S W R LA + ++Y IA G+ R+ L L D ++ AP V A + YG++I+ I + R+ + ++ AE + ++E+ G D +S ++ + F+ F+ A I+ ++ L WGV L + S ++++L L ++AY AV ++I Sbjct: 200 FFAVAVVVYLTVGTGLQAANQTALVIFSVIAAFLVFRI----IFLNLLAPDADSHRLINLSSEEAGSLYRAL-LAGSAVSLFSVGF----CLWMER--LGLSLDAHKIALIGASALSMIILIGISVAYRKTIAGLIRGEAESDPPIW----RKVLANVWHFIAIIYFAIAWGISAVRILLDLPDATGLVGAPLQVMLLAAIVYGILILIIDKVLLPRLDTADAQSKIAEDIKRSEESEGGKEDPESAMAQARAEAADREALRSPFRDLFDRGAAIIVLFGSLDLLASMWGVPLAGSSSLIGSFVEVLLVMFLGYMAYEAVKIVI 508
BLAST of mRNA_M-pyrifera_M_contig80476.18845.1 vs. uniprot
Match: UPI0012BC456F (mechanosensitive ion channel family protein n=1 Tax=Roseibium denhamense TaxID=76305 RepID=UPI0012BC456F) HSP 1 Score: 79.7 bits (195), Expect = 8.170e-13 Identity = 81/330 (24.55%), Postives = 148/330 (44.85%), Query Frame = 1 Query: 1 FFVMAMAVAFALDTGHEPSRR---IIFEIVVAYLFYRLMIRAVSW-NLFAYDAPSHRIVNLSDDEANRLHRDWGIAVAVVVIFAAGARSLSFIGQEQ-----GYAGLTVENILFIQICTACLATLVLAIL---DLKNWKIWQHIFEPRAKSAWLYRLRATLARSVPVVFLVYMLIALGVFIYRLALGLTDPGAVIAAPFVVFWAALMTYGLVIIGIQALYNRRIRYFEERA--AAEQERLAKEAGTV-DIDSGEEMVVGPSSANFEYQPVFKPFFEMAALAIIATIAVGELIRSWGVDLNSDGNFWSSLLDIILASVLCWLAYRAVSLLI 945 FF+ V A+ +G E + ++ ++ A+L R++ W NL A DA SHR+V LS++EA+ L+R AV + A + +G Q G + +++ + + T + ++ +L+ +W+ + + W + + ++Y ++A + R+ L + D ++AAP V A + YGL+I+ I L R+ + +A A + ER G V D DS ++ E + F+ + A ++ A+ L WGV L G+ S +++IL L ++AY AV +LI Sbjct: 197 FFITGAVVYLAIGSGLEAANETAMVVLGMIAAFLTLRII-----WLNLLAPDAESHRLVELSNEEASGLYRSLLAGGAVSLTAFAFCLLMERLGLPQDVHKVALIGASALSMVILSVIAVVYRTTIARLIRGRELETAPLWRRVLA----NVWHF------------IAIIYFVVAWSISSIRILLDMPDATGLVAAPLEVLLLAAVVYGLLILLIDKLLLPRLDTPKAQAQIAEDIERAEDSEGEVQDRDSLLSQARAEAAEREEQRSPFRQLLDRGAAIVVGFGAIDLLANWWGVPLAGSGSLIGSFIEVILVVFLGYMAYEAVKILI 505
BLAST of mRNA_M-pyrifera_M_contig80476.18845.1 vs. uniprot
Match: UPI00187B89AC (mechanosensitive ion channel family protein n=1 Tax=Sneathiella sp. P13V-1 TaxID=2697366 RepID=UPI00187B89AC) HSP 1 Score: 77.4 bits (189), Expect = 4.580e-12 Identity = 78/314 (24.84%), Postives = 141/314 (44.90%), Query Frame = 1 Query: 4 FVMAMAVAFALDTGHEPSRRIIFEIVVAYLFYRLMIRAVSWNLFAYDAPSHRIVNLSDDEANRLHRDWGIAVAVVVIFAAGARSLSF-IGQEQGYAGLTVENILFIQICTACLATLVLAILDLKNWKIW-QHIFEPRAKSAWLYRLRATLARSVPVVFLVYMLIALGVFIYRLALGLTDPGAVIAAPFVVFWAALMTYGLVIIGIQALYNRRIRYFEERAAAEQERLAKEAGTVDIDSGEEMVVGPSSANFEYQPVFKPFFEMAALAIIATIAVGELIRSWGVDLNSDGNFWSSLLDIILASVLCWLAYRAVSL 939 FV+ AL TGH + ++V ++ + + L A DAP+HR+++LSD +A + + VI+A S + + + GL+ + L I + +V + + + +I Q I P AK+ + R LA S ++F Y+++A V + RL L L ++ AP ++ ++ YG+ ++ I + Y ++ A E GT DI E+ +Q E A ++A +A+G L+ +WG+D++S + L DI + + ++ YRAV L Sbjct: 125 FVVISITLIALFTGHAKPDAPVQSVLVLFVAVLRVPFIILDALIAPDAPAHRLIHLSDQQALKFRNN--------VIYAHAPTSFAISVCLMMDHVGLSKDIHLLFLIAAVTIGAVVWTLFAIFHRQIIAQMILGPHAKTENKHGFRQVLAASWHILFAFYIILAWAVTVARLLLDLPSAYHLLVAPMMILLFSIGGYGIALLVIDKVAINFGNYRQKVLANSDEDFG---GTEDIQLYEKA----------WQSDLVKLAEKAVAFLVAILAIGALLETWGIDVSSSDSLVVRLGDIFIVCFVSYVIYRAVKL 417
BLAST of mRNA_M-pyrifera_M_contig80476.18845.1 vs. uniprot
Match: A0A222F5D2_9HYPH (Mechanosensitive ion channel protein n=1 Tax=Labrenzia sp. VG12 TaxID=2021862 RepID=A0A222F5D2_9HYPH) HSP 1 Score: 71.2 bits (173), Expect = 5.290e-10 Identity = 76/328 (23.17%), Postives = 139/328 (42.38%), Query Frame = 1 Query: 1 FFVMAMAVAFALDTGHEPSRR---IIFEIVVAYLFYRLMIRAVSW-NLFAYDAPSHRIVNLSDDEANRLHRDWGIAVAVVVIFAAGARSLSFIGQEQG------YAGLTVENILFIQICTACLATLVLAILDLKNWKIWQHIFEPRAKSAWLYRLRATLARSVPVVFLVYMLIALGVFIYRLALGLTDPGAVIAAPFVVFWAALMTYGLVIIGIQALYNRRIRYFEERA--AAEQERLAKEAGTVDIDSGEEMVVGPSSANFE-YQPVFKPFFEMAALAIIATIAVGELIRSWGVDLNSDGNFWSSLLDIILASVLCWLAYRAVSLLI 945 FF +++ V + +G E + ++F +V ++ R++ W NL DA SHR++ L++ EAN L++ I V + A + +G + + I+ I A + I + +W+ + +W Y + + Y +IA G+ R+ L L D ++ AP V A + YGL+I+ I + R+ + +A A + +R + G+ +A E + F+ F+ A I+ AV L WGV L G+ S ++++L L ++AY AV ++I Sbjct: 199 FFAVSVLVFLLIGSGLEAANETAMVVFGVVAVFMALRII-----WLNLLVPDAESHRLIALTNSEANGLYKSLLIGAGVSLFAVAFCLWMERLGLNEDAHKVALIGASALSMIILTGIAFAYRKAIARLIRGEGDVPVWRRVIA----GSWHY------------IAIFYFVIAWGISAVRILLDLPDATGLVGAPLQVILLAAIVYGLLILIIDRVLLPRLDTADAQAKIAEDIQRAEENEGSEQXXXXXXXXXXXXAAEREAMRSPFRDLFDRGAAIIVVFGAVDILANQWGVPLAGSGSLIGSFIEVLLVVFLGYMAYEAVKIVI 505 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig80476.18845.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 9
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig80476.18845.1 >prot_M-pyrifera_M_contig80476.18845.1 ID=prot_M-pyrifera_M_contig80476.18845.1|Name=mRNA_M-pyrifera_M_contig80476.18845.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=312bp MAMAVAFALDTGHEPSRRIIFEIVVAYLFYRLMIRAVSWNLFAYDAPSHRback to top mRNA from alignment at M-pyrifera_M_contig80476:2..946+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig80476.18845.1 ID=mRNA_M-pyrifera_M_contig80476.18845.1|Name=mRNA_M-pyrifera_M_contig80476.18845.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=945bp|location=Sequence derived from alignment at M-pyrifera_M_contig80476:2..946+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig80476:2..946+ >mRNA_M-pyrifera_M_contig80476.18845.1 ID=mRNA_M-pyrifera_M_contig80476.18845.1|Name=mRNA_M-pyrifera_M_contig80476.18845.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1872bp|location=Sequence derived from alignment at M-pyrifera_M_contig80476:2..946+ (Macrocystis pyrifera P11B4 male)back to top |