mRNA_M-pyrifera_M_contig80419.18836.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig80419.18836.1
Unique NamemRNA_M-pyrifera_M_contig80419.18836.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig80419.18836.1 vs. uniprot
Match: A0A7C1UFG4_9ACTN (AI-2E family transporter n=1 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A7C1UFG4_9ACTN)

HSP 1 Score: 277 bits (709), Expect = 1.160e-90
Identity = 130/248 (52.42%), Postives = 178/248 (71.77%), Query Frame = 1
Query:    1 ELPAYVESAQQWLDESVGIQVSADDLLGQLQPGGEASKFASNLAGDLLGFGSTIANVLFQVLTVIIFAYYFSADGPRLREAVCSVFPPARQHEILRVWELAITKTGGYITSRTILAVISATFHWTIFSILGLPSPIALAIWVGLISQFIPAIGTYLAGILPVLVAVGVDPAKALWVVGAIVVYQQIENYVLQPRITAQTLDMHPAIAIAVVLAGTQLFGGAGALLSLPLVATITAFSTAYIERHELVE 744
            + P Y+E  Q W +    +Q+ A  L+ Q QP G     A +LAG+L+   +T+  +LF+ LTV +F YY  ADGPRLR ++CSV  P  Q E+LRVW +AI KTGGYI SR +L+++S  FHW   ++LG+P P+ALAIWVG++SQFIP +GTYLAG+ P+L+A+  DP  ALWV+  IVVYQQIENY+  PR+TAQT+++HPA+A   V+AG  + G  GALL+LP  ATI AF ++Y++RHELV+
Sbjct:    1 QAPTYIEDIQSWAESQFNVQIDAQGLIAQFQPDGPGGSLAQDLAGNLVDLSTTVVGLLFKGLTVALFTYYLVADGPRLRASICSVLAPRHQIEVLRVWNIAIDKTGGYIYSRALLSLLSLLFHWAALALLGVPFPLALAIWVGVVSQFIPVVGTYLAGLFPILIALLNDPISALWVLIVIVVYQQIENYLFAPRVTAQTMEIHPAVAFGAVIAGAGILGPVGALLALPAGATIQAFVSSYLQRHELVD 248          
BLAST of mRNA_M-pyrifera_M_contig80419.18836.1 vs. uniprot
Match: A0A3D0TY19_9ACTN (AI-2E family transporter n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A3D0TY19_9ACTN)

HSP 1 Score: 277 bits (708), Expect = 6.760e-89
Identity = 130/250 (52.00%), Postives = 180/250 (72.00%), Query Frame = 1
Query:    1 ELPAYVESAQQWLDESVGIQVSADDLLGQLQPGGEASKFASNLAGDLLGFGSTIANVLFQVLTVIIFAYYFSADGPRLREAVCSVFPPARQHEILRVWELAITKTGGYITSRTILAVISATFHWTIFSILGLPSPIALAIWVGLISQFIPAIGTYLAGILPVLVAVGVDPAKALWVVGAIVVYQQIENYVLQPRITAQTLDMHPAIAIAVVLAGTQLFGGAGALLSLPLVATITAFSTAYIERHELVERQ 750
            E P Y++ A  WLD+  GI+VS D L+     GG AS     LAGD++GFGST+  +L Q+ TV++F +Y  ADGPRLR  +CS+  P RQ+ +LR WE+AI KTGGYI SRT+LA  +  FHW  F++LG+P  + LA+WVG+ISQ +P +GTYLAG+LP +VA+  +P  A+WV+  +VVYQQIENY+L PR+T+ T+++HPA++   V+ G  L G AGALL++P  ATI AF + Y++RHELVE +
Sbjct:  117 EAPGYIDRAADWLDDKFGIEVSTDQLISYFSEGGGASSALGTLAGDIVGFGSTLLGLLIQLFTVLLFTFYLVADGPRLRRLICSLLAPRRQNVVLRGWEIAIDKTGGYIYSRTLLAGAAFLFHWAAFALLGVPFALPLALWVGVISQLVPVVGTYLAGLLPSVVALIDEPLSAVWVIVVVVVYQQIENYLLSPRVTSHTMNIHPALSFGAVIVGAALLGSAGALLAIPATATIQAFVSTYVKRHELVESE 366          
BLAST of mRNA_M-pyrifera_M_contig80419.18836.1 vs. uniprot
Match: A0A7X3UHD1_9BACT (AI-2E family transporter n=1 Tax=Candidatus Poribacteria bacterium TaxID=2026781 RepID=A0A7X3UHD1_9BACT)

HSP 1 Score: 276 bits (707), Expect = 1.600e-88
Identity = 132/248 (53.23%), Postives = 179/248 (72.18%), Query Frame = 1
Query:    7 PAYVESAQQWLDESVGIQVSADDLLGQLQPGGEASKFASNLAGDLLGFGSTIANVLFQVLTVIIFAYYFSADGPRLREAVCSVFPPARQHEILRVWELAITKTGGYITSRTILAVISATFHWTIFSILGLPSPIALAIWVGLISQFIPAIGTYLAGILPVLVAVGVDPAKALWVVGAIVVYQQIENYVLQPRITAQTLDMHPAIAIAVVLAGTQLFGGAGALLSLPLVATITAFSTAYIERHELVERQ 750
            P Y+   ++W+DE  GIQ+S DDL  Q   GG A+    ++AG+L+  GST  NV  Q+LTV++F +Y  ADGPRLR  +CS   P+RQ  +LR WELAI KTGGYI SRT+LAV +   HW  F+I+G+P PI LA+WVG++SQF+P +GTYLAG+LP+L+A+  +P  ALWV   ++ YQQ+ENY+L PR+TA T+++HPA+A   VL G  L G AGALL++P  ATI AF + YI+RHEL+E +
Sbjct:  123 PGYLVEIERWVDEQFGIQISTDDLRAQFTAGGSAASLLGDVAGNLVSVGSTAVNVAVQMLTVVLFTFYLVADGPRLRRLLCSALNPSRQAAVLRGWELAIDKTGGYIYSRTLLAVAAFLVHWAAFAIIGVPFPIPLAMWVGVLSQFVPVVGTYLAGLLPLLIALLDEPITALWVAIVVLAYQQVENYLLAPRVTAHTMNIHPAVAFGSVLVGAALLGSAGALLAVPAAATIQAFVSTYIKRHELIESE 370          
BLAST of mRNA_M-pyrifera_M_contig80419.18836.1 vs. uniprot
Match: A0A6B1GEM5_9ACTN (AI-2E family transporter n=5 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A6B1GEM5_9ACTN)

HSP 1 Score: 275 bits (703), Expect = 8.130e-88
Identity = 129/248 (52.02%), Postives = 177/248 (71.37%), Query Frame = 1
Query:    7 PAYVESAQQWLDESVGIQVSADDLLGQLQPGGEASKFASNLAGDLLGFGSTIANVLFQVLTVIIFAYYFSADGPRLREAVCSVFPPARQHEILRVWELAITKTGGYITSRTILAVISATFHWTIFSILGLPSPIALAIWVGLISQFIPAIGTYLAGILPVLVAVGVDPAKALWVVGAIVVYQQIENYVLQPRITAQTLDMHPAIAIAVVLAGTQLFGGAGALLSLPLVATITAFSTAYIERHELVERQ 750
            P Y+   ++W D+   IQ+S DDL  Q   GG A+    ++AG+L+  GST+ NV  Q+LTV +F +Y  ADGPRLR  VCS   PARQ  ++R WELAI KTGGYI SRT+LA+ +   HW  F+++G+P PI LA+WVG++SQF+P +GTYLAG+LP+L+A+  +P  ALWV   ++ YQQIENY+L PR+TA T+++HPA+A   VL G  L G AGALL++P  AT+ AF + YI+RHEL+E +
Sbjct:  135 PGYLADIERWADDQFSIQISTDDLRAQFTEGGSAASLLGDVAGNLVSVGSTVVNVAIQMLTVALFTFYLVADGPRLRRLVCSALAPARQAAVMRGWELAIDKTGGYIYSRTLLAMAAFLVHWAAFAVIGVPFPIPLAMWVGVLSQFVPVVGTYLAGLLPLLIALLDEPISALWVAVVVLAYQQIENYLLAPRVTAHTMNIHPAVAFGAVLVGAALLGSAGALLAVPAAATVQAFVSTYIKRHELIESE 382          
BLAST of mRNA_M-pyrifera_M_contig80419.18836.1 vs. uniprot
Match: A0A2E8GF62_9ACTN (AI-2E family transporter n=2 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A2E8GF62_9ACTN)

HSP 1 Score: 272 bits (695), Expect = 4.320e-87
Identity = 122/250 (48.80%), Postives = 182/250 (72.80%), Query Frame = 1
Query:    1 ELPAYVESAQQWLDESVGIQVSADDLLGQLQPGGEASKFASNLAGDLLGFGSTIANVLFQVLTVIIFAYYFSADGPRLREAVCSVFPPARQHEILRVWELAITKTGGYITSRTILAVISATFHWTIFSILGLPSPIALAIWVGLISQFIPAIGTYLAGILPVLVAVGVDPAKALWVVGAIVVYQQIENYVLQPRITAQTLDMHPAIAIAVVLAGTQLFGGAGALLSLPLVATITAFSTAYIERHELVERQ 750
            E P Y+   ++WL++  GI +  D L+ +   GG A++ ASN+AGDL+  G+ + +++FQ LTV++F +Y  ADGP+LR  +CS  PP++Q  +L+ WE+AI KTG YI SRT+L +++   HW IF++LG+PSP+ LA+WVG++SQF+P  GTYLAG+LP+L+A+  +P  ALWV+ AI VYQQ+ENY+  PRITAQT+++HPA+A   V+ G  L G  G LL++P+ AT+ AF + YI RHE ++ +
Sbjct:  103 EAPGYIAQIERWLEDQFGIVLETDSLIAEFSSGGSAARLASNVAGDLVSIGTALMSLIFQTLTVLLFTFYLVADGPKLRRFLCSALPPSKQALMLKGWEIAIDKTGAYIYSRTLLGLVAFLVHWVIFALLGVPSPVPLALWVGIMSQFVPVAGTYLAGLLPILIALLHNPVSALWVLIAIAVYQQVENYLFAPRITAQTMNIHPAVAFGTVIXGASLLGVVGTLLAVPVAATVQAFVSTYIRRHEXIDSE 352          
BLAST of mRNA_M-pyrifera_M_contig80419.18836.1 vs. uniprot
Match: A0A7C7X765_9ACTN (AI-2E family transporter n=2 Tax=Acidimicrobiia TaxID=84992 RepID=A0A7C7X765_9ACTN)

HSP 1 Score: 270 bits (690), Expect = 2.460e-86
Identity = 123/250 (49.20%), Postives = 180/250 (72.00%), Query Frame = 1
Query:    1 ELPAYVESAQQWLDESVGIQVSADDLLGQLQPGGEASKFASNLAGDLLGFGSTIANVLFQVLTVIIFAYYFSADGPRLREAVCSVFPPARQHEILRVWELAITKTGGYITSRTILAVISATFHWTIFSILGLPSPIALAIWVGLISQFIPAIGTYLAGILPVLVAVGVDPAKALWVVGAIVVYQQIENYVLQPRITAQTLDMHPAIAIAVVLAGTQLFGGAGALLSLPLVATITAFSTAYIERHELVERQ 750
            E P Y+   ++WL++  GI +  D L+ +   GG A++ ASN+AGDL+  G+ + +++FQ LTV++F +Y  ADGP+LR  +CS  PP++Q  +L+ WE+AI KTG YI SRT+L + +   HW +F++L +PSP+ LA+WVG++SQF+P  GTYLAG+LP+L+A+   P  ALWV+ AI VYQQ+ENYV  PRITAQT+++HPA+A   V+ G  L G  G LL++P+ AT+ AF + YI RHELV+ +
Sbjct:  103 EAPGYISQIERWLEDQFGIVLETDSLIAEFSTGGSAARLASNVAGDLVSIGTALMSLIFQTLTVLLFTFYLVADGPKLRRFLCSALPPSKQTLMLKGWEIAIDKTGAYIYSRTLLGLAAFFVHWVVFALLEVPSPVPLALWVGIMSQFVPVAGTYLAGLLPILIALLHQPVSALWVLIAITVYQQLENYVFAPRITAQTMNIHPAVAFGTVIVGASLLGVVGTLLAVPVAATVQAFVSTYIRRHELVDSE 352          
BLAST of mRNA_M-pyrifera_M_contig80419.18836.1 vs. uniprot
Match: A0A2E1WJK5_9ACTN (AI-2E family transporter n=2 Tax=root TaxID=1 RepID=A0A2E1WJK5_9ACTN)

HSP 1 Score: 269 bits (688), Expect = 4.230e-86
Identity = 124/250 (49.60%), Postives = 180/250 (72.00%), Query Frame = 1
Query:    1 ELPAYVESAQQWLDESVGIQVSADDLLGQLQPGGEASKFASNLAGDLLGFGSTIANVLFQVLTVIIFAYYFSADGPRLREAVCSVFPPARQHEILRVWELAITKTGGYITSRTILAVISATFHWTIFSILGLPSPIALAIWVGLISQFIPAIGTYLAGILPVLVAVGVDPAKALWVVGAIVVYQQIENYVLQPRITAQTLDMHPAIAIAVVLAGTQLFGGAGALLSLPLVATITAFSTAYIERHELVERQ 750
            E P Y+   + WL++  GI V  D L+ +   GG A++ ASN+AGDL+  G+ + +++FQ LTV++F +Y  ADGP+LR  +CS  PP++Q  +L+ WE+AI KTG YI SRT+L + +   HW IF++L +PSP+ LA+WVG++SQF+P  GTYLAG+LP+L+A+   P  ALWV+ AIVVYQQ+ENY+  PRITAQT+++HPA+A   V+ G  L G  G LL++P+ AT+ AF + YI RHEL++ +
Sbjct:  103 EAPEYIGQIEGWLEDQFGIVVETDSLVAEFSSGGSAARLASNVAGDLVSIGTALMSLVFQTLTVLLFTFYLVADGPKLRRLLCSALPPSKQQLMLKGWEIAIDKTGAYIYSRTLLGLAAFLVHWIIFALLDVPSPVPLALWVGIMSQFVPVAGTYLAGLLPILIALLHQPISALWVLIAIVVYQQLENYLFAPRITAQTMNIHPAVAFGTVILGASLLGVVGTLLAVPVAATVQAFVSTYIRRHELIDSE 352          
BLAST of mRNA_M-pyrifera_M_contig80419.18836.1 vs. uniprot
Match: A0A2E7T5A5_9ACTN (AI-2E family transporter n=5 Tax=Actinobacteria TaxID=201174 RepID=A0A2E7T5A5_9ACTN)

HSP 1 Score: 269 bits (687), Expect = 4.830e-86
Identity = 122/250 (48.80%), Postives = 179/250 (71.60%), Query Frame = 1
Query:    1 ELPAYVESAQQWLDESVGIQVSADDLLGQLQPGGEASKFASNLAGDLLGFGSTIANVLFQVLTVIIFAYYFSADGPRLREAVCSVFPPARQHEILRVWELAITKTGGYITSRTILAVISATFHWTIFSILGLPSPIALAIWVGLISQFIPAIGTYLAGILPVLVAVGVDPAKALWVVGAIVVYQQIENYVLQPRITAQTLDMHPAIAIAVVLAGTQLFGGAGALLSLPLVATITAFSTAYIERHELVERQ 750
            E P Y+   ++WL+   GI +  D L+ +   GG A++ ASN+AGDL+  G+ + +++FQ LTV++F +Y  ADGP+LR  +CS  PP +Q  +L+ WE+AI KTG YI SRT+L + +   HW +F++LG+PSP+ LA+WVG++SQF+P  GTYLAGILP+L+A+   P  ALWV+ AIVVYQQ+ENY+  PRIT+QT+++HPA+A   V+ G  L G  G L ++P+ AT+ AF + Y+ RHEL+E +
Sbjct:  103 EAPGYIREIEEWLEXKFGIVLETDSLVAEFSSGGSAARLASNIAGDLVSIGTALMSLIFQTLTVLLFTFYLVADGPKLRRLLCSALPPRKQALMLKGWEIAIDKTGAYIYSRTLLGLAAFLVHWLLFALLGVPSPVPLALWVGIMSQFVPVAGTYLAGILPILIALLHQPISALWVLIAIVVYQQLENYLFAPRITSQTMNIHPAVAFGTVILGAALLGVVGTLXAVPVAATVQAFVSTYVRRHELIESE 352          
BLAST of mRNA_M-pyrifera_M_contig80419.18836.1 vs. uniprot
Match: A0A1Z9JTI5_9ACTN (Uncharacterized protein n=3 Tax=Actinobacteria TaxID=201174 RepID=A0A1Z9JTI5_9ACTN)

HSP 1 Score: 268 bits (686), Expect = 7.060e-86
Identity = 122/248 (49.19%), Postives = 179/248 (72.18%), Query Frame = 1
Query:    1 ELPAYVESAQQWLDESVGIQVSADDLLGQLQPGGEASKFASNLAGDLLGFGSTIANVLFQVLTVIIFAYYFSADGPRLREAVCSVFPPARQHEILRVWELAITKTGGYITSRTILAVISATFHWTIFSILGLPSPIALAIWVGLISQFIPAIGTYLAGILPVLVAVGVDPAKALWVVGAIVVYQQIENYVLQPRITAQTLDMHPAIAIAVVLAGTQLFGGAGALLSLPLVATITAFSTAYIERHELVE 744
            E P Y+   ++WL++  G+ +  D L+ +   GG A++ ASN+AGDL+  GS + +++FQ LTV++F +Y  ADGP+LR  +CS  PP +Q  +L+ WE+AI KTG YI SRT+L + +   HW IF++L +PSP+ LA+WVG++SQF+P  GTYLAG+LP+L+A+   P  ALWV+ AIVVYQQ+ENY+  PRIT+QT+++HPA+A   V+ G  L G  G LL++P+ AT+ AF + Y+ RHEL+E
Sbjct:  103 EAPGYIREIERWLEDRFGVVLETDSLVAEFSSGGSAARLASNIAGDLVSIGSALMSLIFQTLTVLLFTFYLVADGPKLRRFLCSALPPRKQKLMLKGWEIAINKTGAYIYSRTLLGLAAFLVHWLIFALLDVPSPVPLALWVGIMSQFVPVAGTYLAGLLPILIALLHQPITALWVLIAIVVYQQLENYLFAPRITSQTMNIHPAVAFGTVILGAGLLGVVGTLLAVPVAATVQAFVSTYVRRHELIE 350          
BLAST of mRNA_M-pyrifera_M_contig80419.18836.1 vs. uniprot
Match: A0A6I3L931_9NOCA (AI-2E family transporter n=3 Tax=Nocardia TaxID=1817 RepID=A0A6I3L931_9NOCA)

HSP 1 Score: 266 bits (679), Expect = 2.730e-85
Identity = 132/246 (53.66%), Postives = 171/246 (69.51%), Query Frame = 1
Query:    4 LPAYVESAQQWLDESVGIQVSADDLLGQLQP-GGEASKFASNLAGDLLGFGSTIANVLFQVLTVIIFAYYFSADGPRLREAVCSVFPPARQHEILRVWELAITKTGGYITSRTILAVISATFHWTIFSILGLPSPIALAIWVGLISQFIPAIGTYLAGILPVLVAVGVDPAKALWVVGAIVVYQQIENYVLQPRITAQTLDMHPAIAIAVVLAGTQLFGGAGALLSLPLVATITAFSTAYIERHEL 738
            LP Y +S   W++ +    VS  DL  +          +A NLAGD+ G G+T   VLFQ L V++F YYF+ADGPR R AVCS+ PP RQ  +LR W++A+ KTGGY+ SR +LA  SA  H+    +LG+PS  ALA+WVG++SQFIP +GTYLAG LPV VA+  +P  ALW++G IVVYQQ ENYVLQPR+TA TLDMHPA+A   VLAG  LFG  GALL++P+ AT  AF +AY+ R+++
Sbjct:   71 LPRYTQSLVTWVNSTFHTDVSVTDLTDRSSDLSSSLQSWALNLAGDVWGIGTTALGVLFQGLGVLLFTYYFAADGPRFRNAVCSLLPPRRQQHVLRAWDIAVEKTGGYLYSRALLAFFSALAHYAAMRVLGIPSAFALALWVGVVSQFIPTVGTYLAGALPVTVALAQNPRTALWILGFIVVYQQFENYVLQPRVTATTLDMHPAVAFGAVLAGAALFGATGALLAIPVTATAQAFLSAYVRRYDV 316          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig80419.18836.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7C1UFG4_9ACTN1.160e-9052.42AI-2E family transporter n=1 Tax=Acidimicrobiales ... [more]
A0A3D0TY19_9ACTN6.760e-8952.00AI-2E family transporter n=1 Tax=Acidimicrobiaceae... [more]
A0A7X3UHD1_9BACT1.600e-8853.23AI-2E family transporter n=1 Tax=Candidatus Poriba... [more]
A0A6B1GEM5_9ACTN8.130e-8852.02AI-2E family transporter n=5 Tax=Acidimicrobiales ... [more]
A0A2E8GF62_9ACTN4.320e-8748.80AI-2E family transporter n=2 Tax=Acidimicrobiaceae... [more]
A0A7C7X765_9ACTN2.460e-8649.20AI-2E family transporter n=2 Tax=Acidimicrobiia Ta... [more]
A0A2E1WJK5_9ACTN4.230e-8649.60AI-2E family transporter n=2 Tax=root TaxID=1 RepI... [more]
A0A2E7T5A5_9ACTN4.830e-8648.80AI-2E family transporter n=5 Tax=Actinobacteria Ta... [more]
A0A1Z9JTI5_9ACTN7.060e-8649.19Uncharacterized protein n=3 Tax=Actinobacteria Tax... [more]
A0A6I3L931_9NOCA2.730e-8553.66AI-2E family transporter n=3 Tax=Nocardia TaxID=18... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig80419contigM-pyrifera_M_contig80419:198..947 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score260.8
Seed ortholog evalue6.7e-67
Seed eggNOG ortholog1206741.BAFX01000080_gene6397
Hectar predicted targeting categoryother localisation
EggNOG free text desc.AI-2E family transporter
EggNOG OGs2GN4Y@201174,4FW39@85025,COG0628@1,COG0628@2
COG Functional cat.S
Best tax levelNocardiaceae
Best eggNOG OGNA|NA|NA
Exons1
Model size750
Cds size750
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816709.8796065-CDS-M-pyrifera_M_contig80419:197..9471622816709.8796065-CDS-M-pyrifera_M_contig80419:197..947Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig80419 198..947 -
1692278133.736355-CDS-M-pyrifera_M_contig80419:197..9471692278133.736355-CDS-M-pyrifera_M_contig80419:197..947Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig80419 198..947 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig80419.18836.1prot_M-pyrifera_M_contig80419.18836.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig80419 198..947 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig80419.18836.1

>prot_M-pyrifera_M_contig80419.18836.1 ID=prot_M-pyrifera_M_contig80419.18836.1|Name=mRNA_M-pyrifera_M_contig80419.18836.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=250bp
ELPAYVESAQQWLDESVGIQVSADDLLGQLQPGGEASKFASNLAGDLLGF
GSTIANVLFQVLTVIIFAYYFSADGPRLREAVCSVFPPARQHEILRVWEL
AITKTGGYITSRTILAVISATFHWTIFSILGLPSPIALAIWVGLISQFIP
AIGTYLAGILPVLVAVGVDPAKALWVVGAIVVYQQIENYVLQPRITAQTL
DMHPAIAIAVVLAGTQLFGGAGALLSLPLVATITAFSTAYIERHELVERQ
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mRNA from alignment at M-pyrifera_M_contig80419:198..947-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig80419.18836.1 ID=mRNA_M-pyrifera_M_contig80419.18836.1|Name=mRNA_M-pyrifera_M_contig80419.18836.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=750bp|location=Sequence derived from alignment at M-pyrifera_M_contig80419:198..947- (Macrocystis pyrifera P11B4 male)
GAGCTCCCCGCCTATGTCGAGAGTGCCCAGCAGTGGCTCGACGAGTCGGT CGGCATCCAGGTCAGCGCCGACGATCTGCTCGGCCAACTCCAGCCCGGTG GCGAAGCCTCGAAGTTTGCGAGCAACCTCGCCGGCGACCTCCTCGGTTTC GGCTCGACCATCGCCAACGTGCTGTTCCAGGTGCTCACCGTCATCATCTT CGCCTACTACTTCTCGGCCGACGGACCCCGCCTGCGCGAAGCCGTCTGTT CGGTCTTCCCTCCCGCTCGCCAGCACGAGATCCTCCGGGTCTGGGAACTC GCCATCACCAAGACCGGCGGCTACATCACCTCTCGAACGATCCTGGCCGT GATCTCGGCCACCTTCCACTGGACCATCTTCAGCATCCTCGGCCTGCCGT CACCCATCGCCCTCGCCATCTGGGTCGGACTCATCTCCCAGTTCATCCCG GCGATCGGTACCTACCTGGCAGGCATCCTGCCGGTACTCGTCGCCGTCGG TGTCGATCCCGCCAAGGCGCTGTGGGTCGTCGGCGCGATCGTCGTCTACC AGCAGATCGAGAACTACGTGCTCCAGCCGAGGATCACGGCGCAGACCCTC GACATGCATCCGGCCATCGCCATCGCCGTCGTCCTCGCAGGCACCCAGCT CTTCGGGGGCGCCGGGGCCCTCTTGTCGCTGCCGCTGGTCGCCACCATCA CGGCCTTCTCGACCGCCTACATCGAACGGCACGAGCTGGTCGAGCGTCAA
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig80419:198..947-

>mRNA_M-pyrifera_M_contig80419.18836.1 ID=mRNA_M-pyrifera_M_contig80419.18836.1|Name=mRNA_M-pyrifera_M_contig80419.18836.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1500bp|location=Sequence derived from alignment at M-pyrifera_M_contig80419:198..947- (Macrocystis pyrifera P11B4 male)
GAGCTCCCCGCCTATGTCGAGAGTGCCCAGCAGTGGCTCGACGAGTCGGT
CGGCATCCAGGTCAGCGCCGACGATCTGCTCGGCCAACTCCAGCCCGGTG
GCGAAGCCTCGAAGTTTGCGAGCAACCTCGCCGGCGACCTCCTCGGTTTC
GGCTCGACCATCGCCAACGTGCTGTTCCAGGTGCTCACCGTCATCATCTT
CGCCTACTACTTCTCGGCCGACGGACCCCGCCTGCGCGAAGCCGTCTGTT
CGGTCTTCCCTCCCGCTCGCCAGCACGAGATCCTCCGGGTCTGGGAACTC
GCCATCACCAAGACCGGCGGCTACATCACCTCTCGAACGATCCTGGCCGT
GATCTCGGCCACCTTCCACTGGACCATCTTCAGCATCCTCGGCCTGCCGT
CACCCATCGCCCTCGCCATCTGGGTCGGACTCATCTCCCAGTTCATCCCG
GCGATCGGTACCTACCTGGCAGGCATCCTGCCGGTACTCGTCGCCGTCGG
TGTCGATCCCGCCAAGGCGCTGTGGGTCGTCGGCGCGATCGTCGTCTACC
AGCAGATCGAGAACTACGTGCTCCAGCCGAGGATCACGGCGCAGACCCTC
GACATGCATCCGGCCATCGCCATCGCCGTCGTCCTCGCAGGCACCCAGCT
CTTCGGGGGCGCCGGGGCCCTCTTGTCGCTGCCGCTGGTCGCCACCATCA
CGGCCTTCTCGACCGCCTACATCGAACGGCACGAGCTGGTCGAGCGTCAA
GAGCTCCCCGCCTATGTCGAGAGTGCCCAGCAGTGGCTCGACGAGTCGGT
CGGCATCCAGGTCAGCGCCGACGATCTGCTCGGCCAACTCCAGCCCGGTG
GCGAAGCCTCGAAGTTTGCGAGCAACCTCGCCGGCGACCTCCTCGGTTTC
GGCTCGACCATCGCCAACGTGCTGTTCCAGGTGCTCACCGTCATCATCTT
CGCCTACTACTTCTCGGCCGACGGACCCCGCCTGCGCGAAGCCGTCTGTT
CGGTCTTCCCTCCCGCTCGCCAGCACGAGATCCTCCGGGTCTGGGAACTC
GCCATCACCAAGACCGGCGGCTACATCACCTCTCGAACGATCCTGGCCGT
GATCTCGGCCACCTTCCACTGGACCATCTTCAGCATCCTCGGCCTGCCGT
CACCCATCGCCCTCGCCATCTGGGTCGGACTCATCTCCCAGTTCATCCCG
GCGATCGGTACCTACCTGGCAGGCATCCTGCCGGTACTCGTCGCCGTCGG
TGTCGATCCCGCCAAGGCGCTGTGGGTCGTCGGCGCGATCGTCGTCTACC
AGCAGATCGAGAACTACGTGCTCCAGCCGAGGATCACGGCGCAGACCCTC
GACATGCATCCGGCCATCGCCATCGCCGTCGTCCTCGCAGGCACCCAGCT
CTTCGGGGGCGCCGGGGCCCTCTTGTCGCTGCCGCTGGTCGCCACCATCA
CGGCCTTCTCGACCGCCTACATCGAACGGCACGAGCTGGTCGAGCGTCAA
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