mRNA_M-pyrifera_M_contig80419.18836.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig80419.18836.1 vs. uniprot
Match: A0A7C1UFG4_9ACTN (AI-2E family transporter n=1 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A7C1UFG4_9ACTN) HSP 1 Score: 277 bits (709), Expect = 1.160e-90 Identity = 130/248 (52.42%), Postives = 178/248 (71.77%), Query Frame = 1 Query: 1 ELPAYVESAQQWLDESVGIQVSADDLLGQLQPGGEASKFASNLAGDLLGFGSTIANVLFQVLTVIIFAYYFSADGPRLREAVCSVFPPARQHEILRVWELAITKTGGYITSRTILAVISATFHWTIFSILGLPSPIALAIWVGLISQFIPAIGTYLAGILPVLVAVGVDPAKALWVVGAIVVYQQIENYVLQPRITAQTLDMHPAIAIAVVLAGTQLFGGAGALLSLPLVATITAFSTAYIERHELVE 744 + P Y+E Q W + +Q+ A L+ Q QP G A +LAG+L+ +T+ +LF+ LTV +F YY ADGPRLR ++CSV P Q E+LRVW +AI KTGGYI SR +L+++S FHW ++LG+P P+ALAIWVG++SQFIP +GTYLAG+ P+L+A+ DP ALWV+ IVVYQQIENY+ PR+TAQT+++HPA+A V+AG + G GALL+LP ATI AF ++Y++RHELV+ Sbjct: 1 QAPTYIEDIQSWAESQFNVQIDAQGLIAQFQPDGPGGSLAQDLAGNLVDLSTTVVGLLFKGLTVALFTYYLVADGPRLRASICSVLAPRHQIEVLRVWNIAIDKTGGYIYSRALLSLLSLLFHWAALALLGVPFPLALAIWVGVVSQFIPVVGTYLAGLFPILIALLNDPISALWVLIVIVVYQQIENYLFAPRVTAQTMEIHPAVAFGAVIAGAGILGPVGALLALPAGATIQAFVSSYLQRHELVD 248
BLAST of mRNA_M-pyrifera_M_contig80419.18836.1 vs. uniprot
Match: A0A3D0TY19_9ACTN (AI-2E family transporter n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A3D0TY19_9ACTN) HSP 1 Score: 277 bits (708), Expect = 6.760e-89 Identity = 130/250 (52.00%), Postives = 180/250 (72.00%), Query Frame = 1 Query: 1 ELPAYVESAQQWLDESVGIQVSADDLLGQLQPGGEASKFASNLAGDLLGFGSTIANVLFQVLTVIIFAYYFSADGPRLREAVCSVFPPARQHEILRVWELAITKTGGYITSRTILAVISATFHWTIFSILGLPSPIALAIWVGLISQFIPAIGTYLAGILPVLVAVGVDPAKALWVVGAIVVYQQIENYVLQPRITAQTLDMHPAIAIAVVLAGTQLFGGAGALLSLPLVATITAFSTAYIERHELVERQ 750 E P Y++ A WLD+ GI+VS D L+ GG AS LAGD++GFGST+ +L Q+ TV++F +Y ADGPRLR +CS+ P RQ+ +LR WE+AI KTGGYI SRT+LA + FHW F++LG+P + LA+WVG+ISQ +P +GTYLAG+LP +VA+ +P A+WV+ +VVYQQIENY+L PR+T+ T+++HPA++ V+ G L G AGALL++P ATI AF + Y++RHELVE + Sbjct: 117 EAPGYIDRAADWLDDKFGIEVSTDQLISYFSEGGGASSALGTLAGDIVGFGSTLLGLLIQLFTVLLFTFYLVADGPRLRRLICSLLAPRRQNVVLRGWEIAIDKTGGYIYSRTLLAGAAFLFHWAAFALLGVPFALPLALWVGVISQLVPVVGTYLAGLLPSVVALIDEPLSAVWVIVVVVVYQQIENYLLSPRVTSHTMNIHPALSFGAVIVGAALLGSAGALLAIPATATIQAFVSTYVKRHELVESE 366
BLAST of mRNA_M-pyrifera_M_contig80419.18836.1 vs. uniprot
Match: A0A7X3UHD1_9BACT (AI-2E family transporter n=1 Tax=Candidatus Poribacteria bacterium TaxID=2026781 RepID=A0A7X3UHD1_9BACT) HSP 1 Score: 276 bits (707), Expect = 1.600e-88 Identity = 132/248 (53.23%), Postives = 179/248 (72.18%), Query Frame = 1 Query: 7 PAYVESAQQWLDESVGIQVSADDLLGQLQPGGEASKFASNLAGDLLGFGSTIANVLFQVLTVIIFAYYFSADGPRLREAVCSVFPPARQHEILRVWELAITKTGGYITSRTILAVISATFHWTIFSILGLPSPIALAIWVGLISQFIPAIGTYLAGILPVLVAVGVDPAKALWVVGAIVVYQQIENYVLQPRITAQTLDMHPAIAIAVVLAGTQLFGGAGALLSLPLVATITAFSTAYIERHELVERQ 750 P Y+ ++W+DE GIQ+S DDL Q GG A+ ++AG+L+ GST NV Q+LTV++F +Y ADGPRLR +CS P+RQ +LR WELAI KTGGYI SRT+LAV + HW F+I+G+P PI LA+WVG++SQF+P +GTYLAG+LP+L+A+ +P ALWV ++ YQQ+ENY+L PR+TA T+++HPA+A VL G L G AGALL++P ATI AF + YI+RHEL+E + Sbjct: 123 PGYLVEIERWVDEQFGIQISTDDLRAQFTAGGSAASLLGDVAGNLVSVGSTAVNVAVQMLTVVLFTFYLVADGPRLRRLLCSALNPSRQAAVLRGWELAIDKTGGYIYSRTLLAVAAFLVHWAAFAIIGVPFPIPLAMWVGVLSQFVPVVGTYLAGLLPLLIALLDEPITALWVAIVVLAYQQVENYLLAPRVTAHTMNIHPAVAFGSVLVGAALLGSAGALLAVPAAATIQAFVSTYIKRHELIESE 370
BLAST of mRNA_M-pyrifera_M_contig80419.18836.1 vs. uniprot
Match: A0A6B1GEM5_9ACTN (AI-2E family transporter n=5 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A6B1GEM5_9ACTN) HSP 1 Score: 275 bits (703), Expect = 8.130e-88 Identity = 129/248 (52.02%), Postives = 177/248 (71.37%), Query Frame = 1 Query: 7 PAYVESAQQWLDESVGIQVSADDLLGQLQPGGEASKFASNLAGDLLGFGSTIANVLFQVLTVIIFAYYFSADGPRLREAVCSVFPPARQHEILRVWELAITKTGGYITSRTILAVISATFHWTIFSILGLPSPIALAIWVGLISQFIPAIGTYLAGILPVLVAVGVDPAKALWVVGAIVVYQQIENYVLQPRITAQTLDMHPAIAIAVVLAGTQLFGGAGALLSLPLVATITAFSTAYIERHELVERQ 750 P Y+ ++W D+ IQ+S DDL Q GG A+ ++AG+L+ GST+ NV Q+LTV +F +Y ADGPRLR VCS PARQ ++R WELAI KTGGYI SRT+LA+ + HW F+++G+P PI LA+WVG++SQF+P +GTYLAG+LP+L+A+ +P ALWV ++ YQQIENY+L PR+TA T+++HPA+A VL G L G AGALL++P AT+ AF + YI+RHEL+E + Sbjct: 135 PGYLADIERWADDQFSIQISTDDLRAQFTEGGSAASLLGDVAGNLVSVGSTVVNVAIQMLTVALFTFYLVADGPRLRRLVCSALAPARQAAVMRGWELAIDKTGGYIYSRTLLAMAAFLVHWAAFAVIGVPFPIPLAMWVGVLSQFVPVVGTYLAGLLPLLIALLDEPISALWVAVVVLAYQQIENYLLAPRVTAHTMNIHPAVAFGAVLVGAALLGSAGALLAVPAAATVQAFVSTYIKRHELIESE 382
BLAST of mRNA_M-pyrifera_M_contig80419.18836.1 vs. uniprot
Match: A0A2E8GF62_9ACTN (AI-2E family transporter n=2 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A2E8GF62_9ACTN) HSP 1 Score: 272 bits (695), Expect = 4.320e-87 Identity = 122/250 (48.80%), Postives = 182/250 (72.80%), Query Frame = 1 Query: 1 ELPAYVESAQQWLDESVGIQVSADDLLGQLQPGGEASKFASNLAGDLLGFGSTIANVLFQVLTVIIFAYYFSADGPRLREAVCSVFPPARQHEILRVWELAITKTGGYITSRTILAVISATFHWTIFSILGLPSPIALAIWVGLISQFIPAIGTYLAGILPVLVAVGVDPAKALWVVGAIVVYQQIENYVLQPRITAQTLDMHPAIAIAVVLAGTQLFGGAGALLSLPLVATITAFSTAYIERHELVERQ 750 E P Y+ ++WL++ GI + D L+ + GG A++ ASN+AGDL+ G+ + +++FQ LTV++F +Y ADGP+LR +CS PP++Q +L+ WE+AI KTG YI SRT+L +++ HW IF++LG+PSP+ LA+WVG++SQF+P GTYLAG+LP+L+A+ +P ALWV+ AI VYQQ+ENY+ PRITAQT+++HPA+A V+ G L G G LL++P+ AT+ AF + YI RHE ++ + Sbjct: 103 EAPGYIAQIERWLEDQFGIVLETDSLIAEFSSGGSAARLASNVAGDLVSIGTALMSLIFQTLTVLLFTFYLVADGPKLRRFLCSALPPSKQALMLKGWEIAIDKTGAYIYSRTLLGLVAFLVHWVIFALLGVPSPVPLALWVGIMSQFVPVAGTYLAGLLPILIALLHNPVSALWVLIAIAVYQQVENYLFAPRITAQTMNIHPAVAFGTVIXGASLLGVVGTLLAVPVAATVQAFVSTYIRRHEXIDSE 352
BLAST of mRNA_M-pyrifera_M_contig80419.18836.1 vs. uniprot
Match: A0A7C7X765_9ACTN (AI-2E family transporter n=2 Tax=Acidimicrobiia TaxID=84992 RepID=A0A7C7X765_9ACTN) HSP 1 Score: 270 bits (690), Expect = 2.460e-86 Identity = 123/250 (49.20%), Postives = 180/250 (72.00%), Query Frame = 1 Query: 1 ELPAYVESAQQWLDESVGIQVSADDLLGQLQPGGEASKFASNLAGDLLGFGSTIANVLFQVLTVIIFAYYFSADGPRLREAVCSVFPPARQHEILRVWELAITKTGGYITSRTILAVISATFHWTIFSILGLPSPIALAIWVGLISQFIPAIGTYLAGILPVLVAVGVDPAKALWVVGAIVVYQQIENYVLQPRITAQTLDMHPAIAIAVVLAGTQLFGGAGALLSLPLVATITAFSTAYIERHELVERQ 750 E P Y+ ++WL++ GI + D L+ + GG A++ ASN+AGDL+ G+ + +++FQ LTV++F +Y ADGP+LR +CS PP++Q +L+ WE+AI KTG YI SRT+L + + HW +F++L +PSP+ LA+WVG++SQF+P GTYLAG+LP+L+A+ P ALWV+ AI VYQQ+ENYV PRITAQT+++HPA+A V+ G L G G LL++P+ AT+ AF + YI RHELV+ + Sbjct: 103 EAPGYISQIERWLEDQFGIVLETDSLIAEFSTGGSAARLASNVAGDLVSIGTALMSLIFQTLTVLLFTFYLVADGPKLRRFLCSALPPSKQTLMLKGWEIAIDKTGAYIYSRTLLGLAAFFVHWVVFALLEVPSPVPLALWVGIMSQFVPVAGTYLAGLLPILIALLHQPVSALWVLIAITVYQQLENYVFAPRITAQTMNIHPAVAFGTVIVGASLLGVVGTLLAVPVAATVQAFVSTYIRRHELVDSE 352
BLAST of mRNA_M-pyrifera_M_contig80419.18836.1 vs. uniprot
Match: A0A2E1WJK5_9ACTN (AI-2E family transporter n=2 Tax=root TaxID=1 RepID=A0A2E1WJK5_9ACTN) HSP 1 Score: 269 bits (688), Expect = 4.230e-86 Identity = 124/250 (49.60%), Postives = 180/250 (72.00%), Query Frame = 1 Query: 1 ELPAYVESAQQWLDESVGIQVSADDLLGQLQPGGEASKFASNLAGDLLGFGSTIANVLFQVLTVIIFAYYFSADGPRLREAVCSVFPPARQHEILRVWELAITKTGGYITSRTILAVISATFHWTIFSILGLPSPIALAIWVGLISQFIPAIGTYLAGILPVLVAVGVDPAKALWVVGAIVVYQQIENYVLQPRITAQTLDMHPAIAIAVVLAGTQLFGGAGALLSLPLVATITAFSTAYIERHELVERQ 750 E P Y+ + WL++ GI V D L+ + GG A++ ASN+AGDL+ G+ + +++FQ LTV++F +Y ADGP+LR +CS PP++Q +L+ WE+AI KTG YI SRT+L + + HW IF++L +PSP+ LA+WVG++SQF+P GTYLAG+LP+L+A+ P ALWV+ AIVVYQQ+ENY+ PRITAQT+++HPA+A V+ G L G G LL++P+ AT+ AF + YI RHEL++ + Sbjct: 103 EAPEYIGQIEGWLEDQFGIVVETDSLVAEFSSGGSAARLASNVAGDLVSIGTALMSLVFQTLTVLLFTFYLVADGPKLRRLLCSALPPSKQQLMLKGWEIAIDKTGAYIYSRTLLGLAAFLVHWIIFALLDVPSPVPLALWVGIMSQFVPVAGTYLAGLLPILIALLHQPISALWVLIAIVVYQQLENYLFAPRITAQTMNIHPAVAFGTVILGASLLGVVGTLLAVPVAATVQAFVSTYIRRHELIDSE 352
BLAST of mRNA_M-pyrifera_M_contig80419.18836.1 vs. uniprot
Match: A0A2E7T5A5_9ACTN (AI-2E family transporter n=5 Tax=Actinobacteria TaxID=201174 RepID=A0A2E7T5A5_9ACTN) HSP 1 Score: 269 bits (687), Expect = 4.830e-86 Identity = 122/250 (48.80%), Postives = 179/250 (71.60%), Query Frame = 1 Query: 1 ELPAYVESAQQWLDESVGIQVSADDLLGQLQPGGEASKFASNLAGDLLGFGSTIANVLFQVLTVIIFAYYFSADGPRLREAVCSVFPPARQHEILRVWELAITKTGGYITSRTILAVISATFHWTIFSILGLPSPIALAIWVGLISQFIPAIGTYLAGILPVLVAVGVDPAKALWVVGAIVVYQQIENYVLQPRITAQTLDMHPAIAIAVVLAGTQLFGGAGALLSLPLVATITAFSTAYIERHELVERQ 750 E P Y+ ++WL+ GI + D L+ + GG A++ ASN+AGDL+ G+ + +++FQ LTV++F +Y ADGP+LR +CS PP +Q +L+ WE+AI KTG YI SRT+L + + HW +F++LG+PSP+ LA+WVG++SQF+P GTYLAGILP+L+A+ P ALWV+ AIVVYQQ+ENY+ PRIT+QT+++HPA+A V+ G L G G L ++P+ AT+ AF + Y+ RHEL+E + Sbjct: 103 EAPGYIREIEEWLEXKFGIVLETDSLVAEFSSGGSAARLASNIAGDLVSIGTALMSLIFQTLTVLLFTFYLVADGPKLRRLLCSALPPRKQALMLKGWEIAIDKTGAYIYSRTLLGLAAFLVHWLLFALLGVPSPVPLALWVGIMSQFVPVAGTYLAGILPILIALLHQPISALWVLIAIVVYQQLENYLFAPRITSQTMNIHPAVAFGTVILGAALLGVVGTLXAVPVAATVQAFVSTYVRRHELIESE 352
BLAST of mRNA_M-pyrifera_M_contig80419.18836.1 vs. uniprot
Match: A0A1Z9JTI5_9ACTN (Uncharacterized protein n=3 Tax=Actinobacteria TaxID=201174 RepID=A0A1Z9JTI5_9ACTN) HSP 1 Score: 268 bits (686), Expect = 7.060e-86 Identity = 122/248 (49.19%), Postives = 179/248 (72.18%), Query Frame = 1 Query: 1 ELPAYVESAQQWLDESVGIQVSADDLLGQLQPGGEASKFASNLAGDLLGFGSTIANVLFQVLTVIIFAYYFSADGPRLREAVCSVFPPARQHEILRVWELAITKTGGYITSRTILAVISATFHWTIFSILGLPSPIALAIWVGLISQFIPAIGTYLAGILPVLVAVGVDPAKALWVVGAIVVYQQIENYVLQPRITAQTLDMHPAIAIAVVLAGTQLFGGAGALLSLPLVATITAFSTAYIERHELVE 744 E P Y+ ++WL++ G+ + D L+ + GG A++ ASN+AGDL+ GS + +++FQ LTV++F +Y ADGP+LR +CS PP +Q +L+ WE+AI KTG YI SRT+L + + HW IF++L +PSP+ LA+WVG++SQF+P GTYLAG+LP+L+A+ P ALWV+ AIVVYQQ+ENY+ PRIT+QT+++HPA+A V+ G L G G LL++P+ AT+ AF + Y+ RHEL+E Sbjct: 103 EAPGYIREIERWLEDRFGVVLETDSLVAEFSSGGSAARLASNIAGDLVSIGSALMSLIFQTLTVLLFTFYLVADGPKLRRFLCSALPPRKQKLMLKGWEIAINKTGAYIYSRTLLGLAAFLVHWLIFALLDVPSPVPLALWVGIMSQFVPVAGTYLAGLLPILIALLHQPITALWVLIAIVVYQQLENYLFAPRITSQTMNIHPAVAFGTVILGAGLLGVVGTLLAVPVAATVQAFVSTYVRRHELIE 350
BLAST of mRNA_M-pyrifera_M_contig80419.18836.1 vs. uniprot
Match: A0A6I3L931_9NOCA (AI-2E family transporter n=3 Tax=Nocardia TaxID=1817 RepID=A0A6I3L931_9NOCA) HSP 1 Score: 266 bits (679), Expect = 2.730e-85 Identity = 132/246 (53.66%), Postives = 171/246 (69.51%), Query Frame = 1 Query: 4 LPAYVESAQQWLDESVGIQVSADDLLGQLQP-GGEASKFASNLAGDLLGFGSTIANVLFQVLTVIIFAYYFSADGPRLREAVCSVFPPARQHEILRVWELAITKTGGYITSRTILAVISATFHWTIFSILGLPSPIALAIWVGLISQFIPAIGTYLAGILPVLVAVGVDPAKALWVVGAIVVYQQIENYVLQPRITAQTLDMHPAIAIAVVLAGTQLFGGAGALLSLPLVATITAFSTAYIERHEL 738 LP Y +S W++ + VS DL + +A NLAGD+ G G+T VLFQ L V++F YYF+ADGPR R AVCS+ PP RQ +LR W++A+ KTGGY+ SR +LA SA H+ +LG+PS ALA+WVG++SQFIP +GTYLAG LPV VA+ +P ALW++G IVVYQQ ENYVLQPR+TA TLDMHPA+A VLAG LFG GALL++P+ AT AF +AY+ R+++ Sbjct: 71 LPRYTQSLVTWVNSTFHTDVSVTDLTDRSSDLSSSLQSWALNLAGDVWGIGTTALGVLFQGLGVLLFTYYFAADGPRFRNAVCSLLPPRRQQHVLRAWDIAVEKTGGYLYSRALLAFFSALAHYAAMRVLGIPSAFALALWVGVVSQFIPTVGTYLAGALPVTVALAQNPRTALWILGFIVVYQQFENYVLQPRVTATTLDMHPAVAFGAVLAGAALFGATGALLAIPVTATAQAFLSAYVRRYDV 316 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig80419.18836.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig80419.18836.1 >prot_M-pyrifera_M_contig80419.18836.1 ID=prot_M-pyrifera_M_contig80419.18836.1|Name=mRNA_M-pyrifera_M_contig80419.18836.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=250bp ELPAYVESAQQWLDESVGIQVSADDLLGQLQPGGEASKFASNLAGDLLGFback to top mRNA from alignment at M-pyrifera_M_contig80419:198..947- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig80419.18836.1 ID=mRNA_M-pyrifera_M_contig80419.18836.1|Name=mRNA_M-pyrifera_M_contig80419.18836.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=750bp|location=Sequence derived from alignment at M-pyrifera_M_contig80419:198..947- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig80419:198..947- >mRNA_M-pyrifera_M_contig80419.18836.1 ID=mRNA_M-pyrifera_M_contig80419.18836.1|Name=mRNA_M-pyrifera_M_contig80419.18836.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1500bp|location=Sequence derived from alignment at M-pyrifera_M_contig80419:198..947- (Macrocystis pyrifera P11B4 male)back to top |