mRNA_M-pyrifera_M_contig80268.18805.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig80268.18805.1
Unique NamemRNA_M-pyrifera_M_contig80268.18805.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig80268.18805.1 vs. uniprot
Match: UPI001A387071 (Uncharacterized protein n=1 Tax=Micromonospora sp. ATA51 TaxID=2806098 RepID=UPI001A387071)

HSP 1 Score: 332 bits (851), Expect = 1.480e-108
Identity = 154/233 (66.09%), Postives = 184/233 (78.97%), Query Frame = 1
Query:    4 YAQTYHELMAEAGVHGVSFSRAGYTGSAAFPCHWAGDEDSTWEAFQAAIRAGLNAGCAGIFYWSWDTAGFSGPIPDAELYLRATAMAAFSPIMQYHSEFNHHEEPRVDRTPWNIAERTGDTRVLDIYRRFANLRMALKPYLVEQSDRSLVSGKPIMRPLCFDHPDDPEIWNHPLQYQLGDDLIVAPIVHQGAEEATVYLPAGEWVNCFSGAPAEAGGEVRRHVPLDQIAVYRR 702
            YA  YHELM  AG  G++FSRAG+TGSAAFP HWAGDEDSTWEA++A+I AGL AG  GIF+W WD AGFSG IPDAELYLR+ A A F+PIMQYHSEFNHH +P VDRTPWNIAERTG+ RVL+++RRFA LR  L PYLV+Q++RS+ +GKP+MRPL FDHPDD  +W+ P Q+QLGDDL+VAP+   GA    V+LPAGEW + F+G       EV R VP+D+I VYRR
Sbjct:  301 YAAAYHELMRSAGTDGLTFSRAGFTGSAAFPAHWAGDEDSTWEAYRASITAGLTAGVGGIFFWGWDLAGFSGDIPDAELYLRSAAAACFAPIMQYHSEFNHHRDPSVDRTPWNIAERTGEQRVLEVFRRFARLREELVPYLVDQAERSVRTGKPLMRPLFFDHPDDKRVWDWPQQWQLGDDLLVAPVTEPGATTWPVWLPAGEWEDFFTGERHSGPVEVHRRVPIDEIPVYRR 533          
BLAST of mRNA_M-pyrifera_M_contig80268.18805.1 vs. uniprot
Match: UPI0017B670EB (Glycoside hydrolase family 31 n=1 Tax=Hamadaea sp. TaxID=2024425 RepID=UPI0017B670EB)

HSP 1 Score: 332 bits (851), Expect = 2.600e-106
Identity = 155/234 (66.24%), Postives = 181/234 (77.35%), Query Frame = 1
Query:    4 YAQTYHELMAEAGVHGVSFSRAGYTGSAAFPCHWAGDEDSTWEAFQAAIRAGLNAGCAGIFYWSWDTAGFSGPIPDAELYLRATAMAAFSPIMQYHSEFNHHEEPRVDRTPWNIAERTGDTRVLDIYRRFANLRMALKPYLVEQSDRSLVSGKPIMRPLCFDHPDDPEIWNHPLQYQLGDDLIVAPIVHQGAEEATVYLPAGEWVNCFSGAPAEAGGEVRRHVPLDQIAVYRRA 705
            YA+ YH LM E G  GV+FSRAG+TG+AAFP HWAGDE+STWEAF+A+I AGL AG  GIF+W WD AGFSG IPDAELYLR+ A A F+PIMQYHSEFNHH EP VDRTPWNIA RTG   V+++YRRFA LR  L PYL  Q+ RS+ +G+P+MRPL FDHP DPEIWN P Q+QLGDDL+VAP+   GA E  VYLPAGEW++ F+G        V R VP+D+I VYRRA
Sbjct:  497 YAEAYHHLMRETGTDGVTFSRAGFTGAAAFPAHWAGDENSTWEAFRASITAGLTAGVGGIFFWGWDLAGFSGDIPDAELYLRSAAAACFAPIMQYHSEFNHHREPSVDRTPWNIASRTGSADVVEVYRRFAQLREELVPYLAAQAARSIETGRPLMRPLFFDHPGDPEIWNWPQQWQLGDDLLVAPVTAPGATEWQVYLPAGEWIDYFTGVRHTGPAVVTREVPVDEIPVYRRA 730          
BLAST of mRNA_M-pyrifera_M_contig80268.18805.1 vs. uniprot
Match: A0A1A8ZRP5_9ACTN (Galactose mutarotase-like n=1 Tax=Micromonospora narathiwatensis TaxID=299146 RepID=A0A1A8ZRP5_9ACTN)

HSP 1 Score: 330 bits (847), Expect = 1.180e-105
Identity = 155/233 (66.52%), Postives = 182/233 (78.11%), Query Frame = 1
Query:    4 YAQTYHELMAEAGVHGVSFSRAGYTGSAAFPCHWAGDEDSTWEAFQAAIRAGLNAGCAGIFYWSWDTAGFSGPIPDAELYLRATAMAAFSPIMQYHSEFNHHEEPRVDRTPWNIAERTGDTRVLDIYRRFANLRMALKPYLVEQSDRSLVSGKPIMRPLCFDHPDDPEIWNHPLQYQLGDDLIVAPIVHQGAEEATVYLPAGEWVNCFSGAPAEAGGEVRRHVPLDQIAVYRR 702
            YA  YHELM  A V GV+FSRAG+TGSAAFP HWAGDEDSTW A++A+I AGL AG  G+FYW WD AGFSG IPDAELYLR+ A A F+PIMQYHSEFNHH EP VDRTPWNIAER G+ RVL+++RRFA LR  L PYLVEQS+RS+ +GKP+MRPL FDHPDD  +W+ P Q+ LGDDL+V+P+   GA    V+LPAGEW + F+G       EVRR VP+D+I VYRR
Sbjct:  501 YAAAYHELMRSARVDGVTFSRAGFTGSAAFPAHWAGDEDSTWAAYRASITAGLTAGVGGVFYWGWDLAGFSGEIPDAELYLRSAAAACFAPIMQYHSEFNHHREPSVDRTPWNIAERAGEPRVLEVFRRFARLREELVPYLVEQSERSVRTGKPLMRPLFFDHPDDERVWDWPQQWHLGDDLLVSPVTEPGATTWAVWLPAGEWEDFFTGERHTGPVEVRRSVPIDEIPVYRR 733          
BLAST of mRNA_M-pyrifera_M_contig80268.18805.1 vs. uniprot
Match: A0A6I5WN47_9ACTN (Glycoside hydrolase family 31 n=2 Tax=Micromonospora sp. WMMC415 TaxID=2675222 RepID=A0A6I5WN47_9ACTN)

HSP 1 Score: 330 bits (845), Expect = 1.990e-105
Identity = 155/233 (66.52%), Postives = 180/233 (77.25%), Query Frame = 1
Query:    4 YAQTYHELMAEAGVHGVSFSRAGYTGSAAFPCHWAGDEDSTWEAFQAAIRAGLNAGCAGIFYWSWDTAGFSGPIPDAELYLRATAMAAFSPIMQYHSEFNHHEEPRVDRTPWNIAERTGDTRVLDIYRRFANLRMALKPYLVEQSDRSLVSGKPIMRPLCFDHPDDPEIWNHPLQYQLGDDLIVAPIVHQGAEEATVYLPAGEWVNCFSGAPAEAGGEVRRHVPLDQIAVYRR 702
            YA  YHELM  AG  GV+FSRAG+TGSAAFP HWAGDEDSTWEA++A+I AGL AG  GIF+W WD AGFSG IPDAELYLR+ A A FSP+MQYHSEFNHH EP VDRTPWNIA RTG+ RVLD++RRFA LR  L PYLVEQ+ RS+ +GKP+MRPL FDHPDD  +W+ P Q+QLGDDL+VAP+   GA    V+LP GEW + F+G       E+ R  PLD+I VYRR
Sbjct:  495 YAAAYHELMRSAGTEGVTFSRAGFTGSAAFPAHWAGDEDSTWEAYRASITAGLTAGVGGIFFWGWDLAGFSGDIPDAELYLRSAAAACFSPVMQYHSEFNHHREPLVDRTPWNIAARTGEPRVLDVFRRFARLREELVPYLVEQAQRSVQTGKPLMRPLFFDHPDDKRVWDWPQQWQLGDDLLVAPVTEPGARTWPVWLPPGEWEDFFTGERHTGPVELDRPAPLDEIPVYRR 727          
BLAST of mRNA_M-pyrifera_M_contig80268.18805.1 vs. uniprot
Match: A0A317DDJ4_9ACTN (Glycoside hydrolase family 31 n=6 Tax=unclassified Micromonospora TaxID=2617518 RepID=A0A317DDJ4_9ACTN)

HSP 1 Score: 328 bits (842), Expect = 5.840e-105
Identity = 153/233 (65.67%), Postives = 182/233 (78.11%), Query Frame = 1
Query:    4 YAQTYHELMAEAGVHGVSFSRAGYTGSAAFPCHWAGDEDSTWEAFQAAIRAGLNAGCAGIFYWSWDTAGFSGPIPDAELYLRATAMAAFSPIMQYHSEFNHHEEPRVDRTPWNIAERTGDTRVLDIYRRFANLRMALKPYLVEQSDRSLVSGKPIMRPLCFDHPDDPEIWNHPLQYQLGDDLIVAPIVHQGAEEATVYLPAGEWVNCFSGAPAEAGGEVRRHVPLDQIAVYRR 702
            YA  YHELM  AG  GV+FSRAG+TGSAAFP HWAGDEDSTWEA++A+I AGL AG  GIF+W WD AGFSG IPDAELYLR+ A A F+PIMQYHSEFNHH +P VDRTPWNIAERTG+ RVL+++RRFA LR  L PYLV+Q++RS+ +GKP+MRPL FDHPDD  +W+ P Q+QLGDDL+VAP+   G     V+LPAGEW + F+        EV R VP+D+I VYRR
Sbjct:  497 YAAAYHELMRSAGTDGVTFSRAGFTGSAAFPAHWAGDEDSTWEAYRASITAGLTAGVGGIFFWGWDLAGFSGDIPDAELYLRSAAAACFAPIMQYHSEFNHHRDPSVDRTPWNIAERTGEQRVLEVFRRFARLREELVPYLVDQAERSVRTGKPLMRPLFFDHPDDKRVWDWPQQWQLGDDLLVAPVTEPGVTTWPVWLPAGEWEDFFTRERHSGPVEVHRRVPIDEIPVYRR 729          
BLAST of mRNA_M-pyrifera_M_contig80268.18805.1 vs. uniprot
Match: A0A6V8KXN9_9ACTN (Gal_mutarotas_2 domain-containing protein n=2 Tax=Phytohabitans houttuyneae TaxID=1076126 RepID=A0A6V8KXN9_9ACTN)

HSP 1 Score: 311 bits (796), Expect = 3.150e-98
Identity = 149/231 (64.50%), Postives = 173/231 (74.89%), Query Frame = 1
Query:    4 YAQTYHELMAEAGVHGVSFSRAGYTGSAAFPCHWAGDEDSTWEAFQAAIRAGLNAGCAGIFYWSWDTAGFSGPIPDAELYLRATAMAAFSPIMQYHSEFNHHEEPRVDRTPWNIAERTGDTRVLDIYRRFANLRMALKPYLVEQSDRSLVSGKPIMRPLCFDHPDDPEIWNHPLQYQLGDDLIVAPIVHQGAEEATVYLPAGEWVNCFSGAPAEAGGEVRRHVPLDQIAVY 696
            YA  YHEL        V+FSRAG+TGSAAFP HWAGDEDSTWE F+A++ AGL AG +GIF+W WD  GFSG IPDAELYLR+ A A F+P+MQYHSEFNHH  P  DRTPWNIAERTGD  VL ++RRFA LR  L PYLVEQ+DRS+ SG+P+MRPL FDHP D  +W+ PLQY+LGDDL+VAP+   GA    VYLPAGEWV+ F+G        V R VPLD+I VY
Sbjct:  489 YAAAYHELAP------VTFSRAGFTGSAAFPAHWAGDEDSTWEGFRASVTAGLTAGVSGIFFWGWDLGGFSGDIPDAELYLRSAAAACFAPLMQYHSEFNHHRTPSRDRTPWNIAERTGDPGVLAVFRRFAKLRENLVPYLVEQADRSVTSGRPLMRPLFFDHPGDERVWDFPLQYRLGDDLLVAPVTEPGATTWRVYLPAGEWVDYFTGEHHTGPVTVDRPVPLDEIPVY 713          
BLAST of mRNA_M-pyrifera_M_contig80268.18805.1 vs. uniprot
Match: A0A7G6X4T9_9ACTN (Glycoside hydrolase family 31 n=1 Tax=Kribbella qitaiheensis TaxID=1544730 RepID=A0A7G6X4T9_9ACTN)

HSP 1 Score: 305 bits (781), Expect = 9.310e-96
Identity = 143/244 (58.61%), Postives = 179/244 (73.36%), Query Frame = 1
Query:    4 YAQTYHELMAEAGVHGVSFSRAGYTGSAAFPCHWAGDEDSTWEAFQAAIRAGLNAGCAGIFYWSWDTAGFSGPIPDAELYLRATAMAAFSPIMQYHSEFNHHEEPRVDRTPWNIAERTGDTRVLDIYRRFANLRMALKPYLVEQSDRSLVSGKPIMRPLCFDHPDDPEIWNHPLQYQLGDDLIVAPIVHQGAEEATVYLPAGEWVNCFSGAPAEAGGEVRRHVPLDQIAVYRRATCSDALAGVF 735
            YA T+ +L+  AG   V+FSRAG+TGS A    WAGDEDSTWEAF+++I AGL A   GI YW WD AGFSGPIPDAELYLRA A + F PIMQYHSEFNHH+ P  DRTPW++AE TGD RV+ ++R++A LR  L PYL EQ+ R++ + +P+MRPL FDHP D EIWNHP QY+LGDDL++ P++  GA   T YLPAG+W++ ++G P   G EV R VPL+ + VY +A     LAGVF
Sbjct:  501 YAHTFGDLLRSAGKAPVTFSRAGFTGSQAHGIFWAGDEDSTWEAFRSSITAGLTAASCGIVYWGWDLAGFSGPIPDAELYLRAAAASVFLPIMQYHSEFNHHQLPLRDRTPWHVAETTGDDRVIPLFRQYAVLRERLIPYLTEQTARAIATDRPLMRPLFFDHPADEEIWNHPHQYKLGDDLLINPVLEPGATTWTTYLPAGDWIDAWTGEPVTGGAEVTREVPLEVVPVYAKAERWPDLAGVF 744          
BLAST of mRNA_M-pyrifera_M_contig80268.18805.1 vs. uniprot
Match: A0A4R8VA02_9MICO (Glycoside hydrolase family 31 n=2 Tax=Terrimesophilobacter mesophilus TaxID=433647 RepID=A0A4R8VA02_9MICO)

HSP 1 Score: 302 bits (773), Expect = 1.170e-94
Identity = 141/245 (57.55%), Postives = 175/245 (71.43%), Query Frame = 1
Query:    1 LYAQTYHELMAEAGVHGVSFSRAGYTGSAAFPCHWAGDEDSTWEAFQAAIRAGLNAGCAGIFYWSWDTAGFSGPIPDAELYLRATAMAAFSPIMQYHSEFNHHEEPRVDRTPWNIAERTGDTRVLDIYRRFANLRMALKPYLVEQSDRSLVSGKPIMRPLCFDHPDDPEIWNHPLQYQLGDDLIVAPIVHQGAEEATVYLPAGEWVNCFSGAPAEAGGEVRRHVPLDQIAVYRRATCSDALAGVF 735
            LYAQ +HEL+  AG  G++FSRAG+ G+ +FP HWAGDE STWEAF+A++ AGL AG +GIF WSWD  GFSG +P AELYLR  AMA FSPIMQYH+EFNHH  P  DRTPWNIAE++GD RVLD+YR    LR  L PYL+EQ+     + KP++R L FDHP D  +W  PLQY LGDDL+V+P+   GA E + YLP GEWV+ ++G     G  V R VP+++I VY R +  + L GVF
Sbjct:  490 LYAQAFHELLKRAGTDGLTFSRAGHAGAGSFPGHWAGDERSTWEAFRASVTAGLTAGASGIFSWSWDHGGFSGELPSAELYLRTGAMAVFSPIMQYHAEFNHHRVPSHDRTPWNIAEQSGDPRVLDVYRGLTELRERLVPYLIEQAKLGTENSKPLLRALFFDHPHDERVWEFPLQYLLGDDLLVSPVTEPGATEWSTYLPEGEWVDAWTGQSHTGGRVVTRAVPIEEIPVYVRVSSWEKLRGVF 734          
BLAST of mRNA_M-pyrifera_M_contig80268.18805.1 vs. uniprot
Match: A0A1V2PDE7_9ACTN (Glycoside hydrolase family 31 n=2 Tax=Kribbella TaxID=182639 RepID=A0A1V2PDE7_9ACTN)

HSP 1 Score: 299 bits (766), Expect = 9.370e-94
Identity = 140/246 (56.91%), Postives = 180/246 (73.17%), Query Frame = 1
Query:    4 YAQTYHELMAEAGVHGVSFSRAGYTGSAAFPCHWAGDEDSTWEAFQAAIRAGLNAGCAGIFYWSWDTAGFSGPIPDAELYLRATAMAAFSPIMQYHSEFNHHEEPRVDRTPWNIAERTGDTRVLDIYRRFANLRMALKPYLVEQSDRSLVSGKPIMRPLCFDHPDDPEIWNHPLQYQLGDDLIVAPIVHQGAEEATVYLPAGEWVNCFSGAPAEAGGEVRRHVPLDQIAVYRRATCSDALAGVFDT 741
            YA+T+ +L+  AG   V+FSR+G+TGS A   +WAGDEDSTWEAF++++ AGL A   GI YW WD AGFSGP+PDAELYLRA A + F PIMQYHSEFNHH+ P  DRTPW++AE TGD RV+ ++R +A LR  L PYL EQ+ R++ + +P+MRPL FDH DDPE+WNHP QY LGDDL+V P++  GA   T YLPAG+W + ++G PA AG +V R VPL  + VY + +    LA +F T
Sbjct:  475 YARTFGDLLRSAGKAPVTFSRSGFTGSQAHGIYWAGDEDSTWEAFRSSVTAGLTAASCGIVYWGWDLAGFSGPVPDAELYLRAAAASVFMPIMQYHSEFNHHQLPLRDRTPWHVAEMTGDDRVVPLFRSYAELRERLVPYLTEQAARTISTDRPLMRPLFFDHADDPEVWNHPHQYLLGDDLLVNPVLEPGATHWTTYLPAGDWTDVWTGEPAGAG-QVTREVPLTVVPVYAKTSSWQRLAPIFVT 719          
BLAST of mRNA_M-pyrifera_M_contig80268.18805.1 vs. uniprot
Match: A0A4R7T886_9ACTN (Galactose mutarotase-like protein n=2 Tax=Kribbella TaxID=182639 RepID=A0A4R7T886_9ACTN)

HSP 1 Score: 295 bits (754), Expect = 7.140e-92
Identity = 139/244 (56.97%), Postives = 175/244 (71.72%), Query Frame = 1
Query:    4 YAQTYHELMAEAGVHGVSFSRAGYTGSAAFPCHWAGDEDSTWEAFQAAIRAGLNAGCAGIFYWSWDTAGFSGPIPDAELYLRATAMAAFSPIMQYHSEFNHHEEPRVDRTPWNIAERTGDTRVLDIYRRFANLRMALKPYLVEQSDRSLVSGKPIMRPLCFDHPDDPEIWNHPLQYQLGDDLIVAPIVHQGAEEATVYLPAGEWVNCFSGAPAEAGGEVRRHVPLDQIAVYRRATCSDALAGVF 735
            YA+T+ +L+  AG   V+FSR+G+TGS A    WAGDEDSTW AF++++ AGL A   GI YW WD AGFSGP+PDAELYLRA A + F PIMQYHSEFNHH+ P  DRTPW++AE TGD RV+ ++R +A LR  L PYL EQ+ R++ + +P+MRPL FDH DDPE+WNHP QY LGDDL+V P++  GA   T YLPAG+W + ++G P    G+V R VPLD + VY R      LA VF
Sbjct:  490 YARTFGDLLRSAGKAPVTFSRSGFTGSQAHGIFWAGDEDSTWAAFRSSVIAGLTAASCGIVYWGWDLAGFSGPVPDAELYLRAAAASVFMPIMQYHSEFNHHQLPLRDRTPWHVAETTGDERVVPLFRTYAELRERLVPYLTEQTARTISTDRPLMRPLFFDHADDPEVWNHPHQYLLGDDLLVNPVLEPGAITWTTYLPAGDWTDVWTGEPV-GNGQVTREVPLDVVPVYARTARWPGLAAVF 732          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig80268.18805.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI001A3870711.480e-10866.09Uncharacterized protein n=1 Tax=Micromonospora sp.... [more]
UPI0017B670EB2.600e-10666.24Glycoside hydrolase family 31 n=1 Tax=Hamadaea sp.... [more]
A0A1A8ZRP5_9ACTN1.180e-10566.52Galactose mutarotase-like n=1 Tax=Micromonospora n... [more]
A0A6I5WN47_9ACTN1.990e-10566.52Glycoside hydrolase family 31 n=2 Tax=Micromonospo... [more]
A0A317DDJ4_9ACTN5.840e-10565.67Glycoside hydrolase family 31 n=6 Tax=unclassified... [more]
A0A6V8KXN9_9ACTN3.150e-9864.50Gal_mutarotas_2 domain-containing protein n=2 Tax=... [more]
A0A7G6X4T9_9ACTN9.310e-9658.61Glycoside hydrolase family 31 n=1 Tax=Kribbella qi... [more]
A0A4R8VA02_9MICO1.170e-9457.55Glycoside hydrolase family 31 n=2 Tax=Terrimesophi... [more]
A0A1V2PDE7_9ACTN9.370e-9456.91Glycoside hydrolase family 31 n=2 Tax=Kribbella Ta... [more]
A0A4R7T886_9ACTN7.140e-9256.97Galactose mutarotase-like protein n=2 Tax=Kribbell... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig80268contigM-pyrifera_M_contig80268:203..949 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score290.8
Seed ortholog evalue5.8e-76
Seed eggNOG ortholog479435.Kfla_1895
KEGG koko:K22307
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Belongs to the glycosyl hydrolase 31 family
EggNOG OGs2GP4V@201174,4DTZ8@85009,COG1501@1,COG1501@2
EC3.2.1.204
COG Functional cat.G
CAZyGH31
Best tax levelPropionibacteriales
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000
Exons1
Model size747
Cds size720
Stop1
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816707.9430604-CDS-M-pyrifera_M_contig80268:202..9221622816707.9430604-CDS-M-pyrifera_M_contig80268:202..922Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig80268 203..922 -
1692278132.4375486-CDS-M-pyrifera_M_contig80268:202..9221692278132.4375486-CDS-M-pyrifera_M_contig80268:202..922Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig80268 203..922 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816707.9566793-UTR-M-pyrifera_M_contig80268:922..9491622816707.9566793-UTR-M-pyrifera_M_contig80268:922..949Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig80268 923..949 -
1692278132.4520125-UTR-M-pyrifera_M_contig80268:922..9491692278132.4520125-UTR-M-pyrifera_M_contig80268:922..949Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig80268 923..949 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig80268.18805.1prot_M-pyrifera_M_contig80268.18805.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig80268 203..922 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig80268.18805.1

>prot_M-pyrifera_M_contig80268.18805.1 ID=prot_M-pyrifera_M_contig80268.18805.1|Name=mRNA_M-pyrifera_M_contig80268.18805.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=240bp
MAEAGVHGVSFSRAGYTGSAAFPCHWAGDEDSTWEAFQAAIRAGLNAGCA
GIFYWSWDTAGFSGPIPDAELYLRATAMAAFSPIMQYHSEFNHHEEPRVD
RTPWNIAERTGDTRVLDIYRRFANLRMALKPYLVEQSDRSLVSGKPIMRP
LCFDHPDDPEIWNHPLQYQLGDDLIVAPIVHQGAEEATVYLPAGEWVNCF
SGAPAEAGGEVRRHVPLDQIAVYRRATCSDALAGVFDTD*
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mRNA from alignment at M-pyrifera_M_contig80268:203..949-

Legend: UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig80268.18805.1 ID=mRNA_M-pyrifera_M_contig80268.18805.1|Name=mRNA_M-pyrifera_M_contig80268.18805.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=747bp|location=Sequence derived from alignment at M-pyrifera_M_contig80268:203..949- (Macrocystis pyrifera P11B4 male)
CTCTATGCCCAGACCTATCACGAGCTCATGGCCGAAGCCGGAGTCCACGG CGTGTCGTTCTCACGAGCCGGATACACCGGGTCCGCAGCGTTCCCGTGCC ATTGGGCGGGCGACGAGGACTCGACCTGGGAAGCCTTCCAGGCGGCCATC CGGGCCGGTCTGAACGCCGGTTGTGCCGGCATCTTCTACTGGTCGTGGGA CACCGCCGGCTTCTCCGGGCCGATCCCCGATGCCGAGCTCTACCTGCGGG CGACGGCGATGGCCGCCTTCAGCCCGATCATGCAGTACCACTCGGAGTTC AACCATCACGAGGAACCTCGGGTCGATCGCACCCCGTGGAACATCGCGGA ACGAACCGGTGACACACGGGTGCTCGACATCTACCGACGGTTCGCCAACC TCCGGATGGCGCTGAAGCCGTACCTGGTCGAGCAGTCGGATCGTTCGCTC GTGTCCGGTAAGCCGATCATGCGACCCCTGTGCTTCGATCATCCCGACGA TCCCGAGATCTGGAATCATCCGCTCCAATATCAGCTTGGCGACGACCTGA TCGTCGCGCCGATCGTCCATCAGGGTGCAGAAGAGGCAACCGTCTATCTG CCGGCGGGGGAGTGGGTGAACTGCTTCTCCGGGGCGCCGGCCGAGGCAGG CGGTGAGGTCCGTCGACACGTTCCGTTGGATCAGATCGCGGTGTATCGGC GAGCAACGTGCTCGGATGCGCTGGCGGGGGTCTTCGACACCGACTGA
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig80268:203..949-

>mRNA_M-pyrifera_M_contig80268.18805.1 ID=mRNA_M-pyrifera_M_contig80268.18805.1|Name=mRNA_M-pyrifera_M_contig80268.18805.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1440bp|location=Sequence derived from alignment at M-pyrifera_M_contig80268:203..949- (Macrocystis pyrifera P11B4 male)
ATGGCCGAAGCCGGAGTCCACGGCGTGTCGTTCTCACGAGCCGGATACAC
CGGGTCCGCAGCGTTCCCGTGCCATTGGGCGGGCGACGAGGACTCGACCT
GGGAAGCCTTCCAGGCGGCCATCCGGGCCGGTCTGAACGCCGGTTGTGCC
GGCATCTTCTACTGGTCGTGGGACACCGCCGGCTTCTCCGGGCCGATCCC
CGATGCCGAGCTCTACCTGCGGGCGACGGCGATGGCCGCCTTCAGCCCGA
TCATGCAGTACCACTCGGAGTTCAACCATCACGAGGAACCTCGGGTCGAT
CGCACCCCGTGGAACATCGCGGAACGAACCGGTGACACACGGGTGCTCGA
CATCTACCGACGGTTCGCCAACCTCCGGATGGCGCTGAAGCCGTACCTGG
TCGAGCAGTCGGATCGTTCGCTCGTGTCCGGTAAGCCGATCATGCGACCC
CTGTGCTTCGATCATCCCGACGATCCCGAGATCTGGAATCATCCGCTCCA
ATATCAGCTTGGCGACGACCTGATCGTCGCGCCGATCGTCCATCAGGGTG
CAGAAGAGGCAACCGTCTATCTGCCGGCGGGGGAGTGGGTGAACTGCTTC
TCCGGGGCGCCGGCCGAGGCAGGCGGTGAGGTCCGTCGACACGTTCCGTT
GGATCAGATCGCGGTGTATCGGCGAGCAACGTGCTCGGATGCGCTGGCGG
GGGTCTTCGACACCGACTGAATGGCCGAAGCCGGAGTCCACGGCGTGTCG
TTCTCACGAGCCGGATACACCGGGTCCGCAGCGTTCCCGTGCCATTGGGC
GGGCGACGAGGACTCGACCTGGGAAGCCTTCCAGGCGGCCATCCGGGCCG
GTCTGAACGCCGGTTGTGCCGGCATCTTCTACTGGTCGTGGGACACCGCC
GGCTTCTCCGGGCCGATCCCCGATGCCGAGCTCTACCTGCGGGCGACGGC
GATGGCCGCCTTCAGCCCGATCATGCAGTACCACTCGGAGTTCAACCATC
ACGAGGAACCTCGGGTCGATCGCACCCCGTGGAACATCGCGGAACGAACC
GGTGACACACGGGTGCTCGACATCTACCGACGGTTCGCCAACCTCCGGAT
GGCGCTGAAGCCGTACCTGGTCGAGCAGTCGGATCGTTCGCTCGTGTCCG
GTAAGCCGATCATGCGACCCCTGTGCTTCGATCATCCCGACGATCCCGAG
ATCTGGAATCATCCGCTCCAATATCAGCTTGGCGACGACCTGATCGTCGC
GCCGATCGTCCATCAGGGTGCAGAAGAGGCAACCGTCTATCTGCCGGCGG
GGGAGTGGGTGAACTGCTTCTCCGGGGCGCCGGCCGAGGCAGGCGGTGAG
GTCCGTCGACACGTTCCGTTGGATCAGATCGCGGTGTATCGGCGAGCAAC
GTGCTCGGATGCGCTGGCGGGGGTCTTCGACACCGACTGA
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