mRNA_M-pyrifera_M_contig79878.18740.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig79878.18740.1
Unique NamemRNA_M-pyrifera_M_contig79878.18740.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig79878.18740.1 vs. uniprot
Match: A0A812IHE1_9DINO (NPEPL1 protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812IHE1_9DINO)

HSP 1 Score: 296 bits (757), Expect = 6.040e-97
Identity = 149/252 (59.13%), Postives = 185/252 (73.41%), Query Frame = 1
Query:    1 LEHCPEGVDASESCVAMIGKGIVYDSGGLSIKSKTGMPGMKRDCGGACAVLGAFRAIALSGGSAKR-ICAVLCLAENAVDERSARPDDCYHFYSGKCVEINNTDAEGRLVLADGVAYATKHLNPAVVIDMATLTGAQSIATGRSVGALYTNSEDLGVLCTGAGRDSGDLVHPLPYIPEFWLKEFKSEVADLTNSAADKGNAGSACPAAFIGAHMQSYLDAGGLWAHFDIAAPAHAHKRGTGFGVALLVTICE 753
            L   P G D +   V M+GKGIVYD+GGLSIK+KTGMPGMK+D GG+  +LGAFR++AL+GG   R + A+LCLAEN+V + + RPDD    YSGK VE+NNTDAEGRLVL DGVA+   HLNPAVV+DMATLTGAQ IATGR+ GALY N ++L      AG+ SGDLVHPLPY PEF+  EF+S VAD+ NS AD+ NA S+C   F+G H+  ++  G  W H D+A PA + +RGTGFGVALL  + +
Sbjct:   74 LTFIPPGTDTAAPSVCMVGKGIVYDTGGLSIKTKTGMPGMKKDMGGSAGILGAFRSLALAGGVPGRPLHALLCLAENSVSKEAQRPDDVITLYSGKTVELNNTDAEGRLVLGDGVAHCVAHLNPAVVLDMATLTGAQGIATGRNHGALYCNCDELEAAAVAAGKTSGDLVHPLPYAPEFYRAEFRSTVADMKNSVADRANAQSSCAGQFVGNHLGDFITTG-KWCHIDMAYPASSGERGTGFGVALLEQLAQ 324          
BLAST of mRNA_M-pyrifera_M_contig79878.18740.1 vs. uniprot
Match: A0A812TQK4_SYMMI (NPEPL1 protein (Fragment) n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812TQK4_SYMMI)

HSP 1 Score: 281 bits (718), Expect = 3.320e-91
Identity = 145/255 (56.86%), Postives = 179/255 (70.20%), Query Frame = 1
Query:    1 LEHCPEGVDASESCVAMIGKGIVYDSGGLSIKSKTGMPGMKRDCGGACAVLGAFRAIALSGGSA--KRICAVLCLAENAVDERSARPDDCYHFYSGKCVEINNTDAEGRLVLADGVAYATKHLNPAVVIDMATLTGAQSIATGRSVGALYTNSEDLGVLCTGAGRDSGDLVHPLPYIPEFWLKEFKSEVADLTNSAADKGNAGSACPAAFIGAHMQSYLDAGGLWAHFDIAAPAHAHKRGTGFGVALLVTICEKL 759
            L + P G D S   V ++GKGIVYD+GGLSIK+K GMPGMKRD GG+  VLGAFR++ +   S   + I A+LCLAENAV   + RPDD +  YSGK VEINNTDAEGRLVL+DGVAYA + LNP+++IDMATLTGAQ IATG+  GALY   E L       GR +GDL HPLPY+PEF+  EF S +AD+ NS A + NA S+C   FIG H++ ++  GG W H D+A PA   +R TG+GVALL  I + L
Sbjct:   64 LSYVPAGCDDSTQSVCLVGKGIVYDTGGLSIKTKEGMPGMKRDMGGSAGVLGAFRSLVMDCSSLPPRPIHALLCLAENAVGPEATRPDDVHVMYSGKTVEINNTDAEGRLVLSDGVAYAARTLNPSMIIDMATLTGAQGIATGKRHGALYCTDETLETHAVAMGRVTGDLAHPLPYVPEFFTIEFASAIADMKNSVACRTNAQSSCAGQFIGNHIEEFIANGGKWMHIDMAYPASQGERATGYGVALLYAIVKNL 318          
BLAST of mRNA_M-pyrifera_M_contig79878.18740.1 vs. uniprot
Match: UPI001F04CADF (probable aminopeptidase NPEPL1 n=1 Tax=Xenia sp. Carnegie-2017 TaxID=2897299 RepID=UPI001F04CADF)

HSP 1 Score: 282 bits (721), Expect = 3.160e-89
Identity = 150/252 (59.52%), Postives = 179/252 (71.03%), Query Frame = 1
Query:    1 LEHCPEGVDASESCVAMIGKGIVYDSGGLSIKSKTGMPGMKRDCGGACAVLGAFRAIALSGGSAKRICAVLCLAENAVDERSARPDDCYHFYSGKCVEINNTDAEGRLVLADGVAYATKHLNPAVVIDMATLTGAQSIATGRSVGALYTNSEDLGVLCTGAGRDSGDLVHPLPYIPEFWLKEFKSEVADLTNSAADKGNAGSACPAAFIGAHMQSYLDAGGLWAHFDIAAPAHAHKRGTGFGVALLVTICEK 756
            L H P+G DASE+ +A +GKGIVYD+GGLSIK KT MPGMK DCGGA A+LGAF+A A+  G  K + A+ CLAENAV   S RPDD + FYSGK VEINNTDAEGRL L DGVAYA K L   +V+DMATLTGAQ ++TG+   A+ TN E+  +    AG+ SGDLVHPLPY PE   +EF S VAD+ NS  ++ NA S+C   FIGAH+    D  G W HFDIAAPA   +R TGFGVALL+ +  K
Sbjct:  245 LSHMPDGADASEN-IAWVGKGIVYDTGGLSIKGKTAMPGMKADCGGAAAILGAFKA-AVKQGFKKNLHALFCLAENAVGPYSTRPDDIHIFYSGKSVEINNTDAEGRLALGDGVAYAAKDLKANIVVDMATLTGAQGVSTGQYHAAVVTNLEEWEMKSVSAGKYSGDLVHPLPYAPELHFQEFSSTVADMKNSVRNRDNAQSSCAGLFIGAHLG--FDFPGAWVHFDIAAPATTGERATGFGVALLLRLFGK 492          
BLAST of mRNA_M-pyrifera_M_contig79878.18740.1 vs. uniprot
Match: A0A7S4D6D4_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D6D4_HETAK)

HSP 1 Score: 274 bits (700), Expect = 4.530e-89
Identity = 144/257 (56.03%), Postives = 181/257 (70.43%), Query Frame = 1
Query:    1 LEHCPEGVDASESCVAMIGKGIVYDSGGLSIKSKTGMPGMKRDCGGACAVLGAFRAI-ALSGGSAKR---ICAVLCLAENAVDERSARPDDCYHFYSGKCVEINNTDAEGRLVLADGVAYATKHLNPAVVIDMATLTGAQSIATGRSVGALYTNSEDLGVLCTGAGRDSGDLVHPLPYIPEFWLKEFKSEVADLTNSAADKGNAGSACPAAFIGAHMQSYLDAGGLWAHFDIAAPAHAHKRGTGFGVALLVTICEKL 759
            L   PEG       VA++GKGIVYD+GGLS+K+K GMPGMKRD GGA A+L AF A  A++G  A     +  +LCLAEN+V E + RPDD    YSGK VEINNTDAEGRLVL DGVA+A  HL P+V++DMATLTGAQ I+TG+ + +LY N E L  L T  GR SGDL HP+P+ PEF+  EFKS VAD+ NS  D+ NA  +C A FIG H+  +L +G  W H D+A P++A +R TGFGVAL+V + ++L
Sbjct:   14 LSRVPEGAAGGGGGVALVGKGIVYDTGGLSLKTKDGMPGMKRDMGGAAALLEAFGAYCAVAGAGAAPGPPVHCLLCLAENSVSEGATRPDDILQLYSGKTVEINNTDAEGRLVLGDGVAHAVAHLQPSVILDMATLTGAQGISTGKRIASLYCNDEALERLVTEVGRSSGDLCHPMPFCPEFYRDEFKSAVADMKNSVKDRANAQVSCAAQFIGNHLGDFLYSG-RWVHVDMAYPSYAGERATGFGVALVVELLQRL 269          
BLAST of mRNA_M-pyrifera_M_contig79878.18740.1 vs. uniprot
Match: A0A2R5GLB9_9STRA (Leucine aminopeptidase 1 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GLB9_9STRA)

HSP 1 Score: 281 bits (718), Expect = 1.570e-88
Identity = 143/251 (56.97%), Postives = 180/251 (71.71%), Query Frame = 1
Query:    1 LEHCPEGVDASESCVAMIGKGIVYDSGGLSIKSKTGMPGMKRDCGGACAVLGAFRAIALSGGSAKRICAVLCLAENAVDERSARPDDCYHFYSGKCVEINNTDAEGRLVLADGVAYATKHLNPAVVIDMATLTGAQSIATGRSVGALYTNSEDLGVLCTGAGRDSGDLVHPLPYIPEFWLKEFKSEVADLTNSAADKGNAGSACPAAFIGAHMQSYLDAGGLWAHFDIAAPAHAHKRGTGFGVALLVTICE 753
            L H PE    S + V +IGKGIVYD+GGLSIKSKTGMPGMKRD GG+   LG F A+  +GG  + +  +L LAEN+V   + RPDD + FYSGK VEINNTDAEGRLV+AD +AYA KHLNP ++I+MATLTGAQS ATG    A++TN +++  L   AG+ SGDLVHPLPY PEF+  EFKSE+AD+ NS  ++ NAG A PA F+  H++ YLD    W H D+A+PA    + TG+GVALL T+ +
Sbjct:  276 LSHKPE--TKSSASVCLIGKGIVYDTGGLSIKSKTGMPGMKRDMGGSAGCLGGFLALVNAGGIGQEMHCLLALAENSVASNATRPDDVHTFYSGKTVEINNTDAEGRLVMADALAYAVKHLNPELLINMATLTGAQSSATGLKHAAVFTNLDEVEALAVQAGQRSGDLVHPLPYTPEFFRGEFKSEIADMKNSQKNRSNAGCAAPATFLSNHIEPYLDQNKAWLHIDMASPAENKGKATGYGVALLFTLLK 524          
BLAST of mRNA_M-pyrifera_M_contig79878.18740.1 vs. uniprot
Match: M3ZMK3_XIPMA (CYTOSOL_AP domain-containing protein n=4 Tax=Ovalentaria TaxID=1489908 RepID=M3ZMK3_XIPMA)

HSP 1 Score: 276 bits (705), Expect = 3.370e-88
Identity = 145/249 (58.23%), Postives = 175/249 (70.28%), Query Frame = 1
Query:    1 LEHCPEGVDASESCVAMIGKGIVYDSGGLSIKSKTGMPGMKRDCGGACAVLGAFRAIALSGGSAKRICAVLCLAENAVDERSARPDDCYHFYSGKCVEINNTDAEGRLVLADGVAYATKHLNPAVVIDMATLTGAQSIATGRSVGALYTNSEDLGVLCTGAGRDSGDLVHPLPYIPEFWLKEFKSEVADLTNSAADKGNAGSACPAAFIGAHMQSYLDAGGLWAHFDIAAPAHAHKRGTGFGVALLVTI 747
            L H P+G   +   +A +GKGIVYD+GGLSIK KT MPGMKRDCGGA A+LGAF+A  +  G    + AV CLAEN+V   + RPDD +  YSGK VEINNTDAEGRLVLADGV YA+K L+  +++DMATLTGAQ I+TG+   A+ TNSE   V C  AGR SGDL HPL Y PE    EF S VAD+ NS AD+ NA S+C   FIG+H+    D  G+W H DIA+P HA +R TGFGVALL+ +
Sbjct:  116 LSHTPDGATQT---IAWVGKGIVYDTGGLSIKGKTTMPGMKRDCGGAAAILGAFKAT-IKQGFKDNLHAVFCLAENSVGPTATRPDDIHALYSGKTVEINNTDAEGRLVLADGVVYASKDLSADIILDMATLTGAQGISTGKYHAAVMTNSEQWEVACVRAGRSSGDLTHPLVYCPELHFSEFTSAVADMKNSVADRENAQSSCAGLFIGSHLG--FDWPGVWVHVDIASPVHAGERATGFGVALLMAL 358          
BLAST of mRNA_M-pyrifera_M_contig79878.18740.1 vs. uniprot
Match: A0A7R9UC92_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UC92_9STRA)

HSP 1 Score: 280 bits (715), Expect = 5.040e-88
Identity = 142/249 (57.03%), Postives = 177/249 (71.08%), Query Frame = 1
Query:    1 LEHCPEGVDASESCVAMIGKGIVYDSGGLSIKSKTGMPGMKRDCGGACAVLGAFRAIALSGGSAKRICAVLCLAENAVDERSARPDDCYHFYSGKCVEINNTDAEGRLVLADGVAYATKHLNPAVVIDMATLTGAQSIATGRSVGALYTNSEDLGVLCTGAGRDSGDLVHPLPYIPEFWLKEFKSEVADLTNSAADKGNAGSACPAAFIGAHMQSYLDAGGLWAHFDIAAPAHAHKRGTGFGVALLVTI 747
            L + P G  + ++   ++GKGIVYD+GGLSIK+KTGMPGMK+D GGA  +LGAFRA   +G   K +  +LCLAENAV   + RPDD + FYSG  VEINNTDAEGRLVLADGVA+A KHLNP +VI+M TLTGAQ IATG+   A+Y N ED+      AGR SGDL H +PY PEF+  EF S+VAD+ NS AD+ NA  +C A FIG H++ Y + G  W H D+A P   ++R TG+GVALLV +
Sbjct:  279 LSYFPPGTTSGDAATILVGKGIVYDTGGLSIKTKTGMPGMKKDMGGASGILGAFRAAVAAGVPQKPLYCLLCLAENAVGPLATRPDDIHTFYSGLTVEINNTDAEGRLVLADGVAFAAKHLNPHIVINMCTLTGAQGIATGQKHAAIYCNDEDVEEQTLRAGRSSGDLAHAVPYCPEFYRGEFASKVADMKNSVADRSNAQVSCAAQFIGNHLREYQETG-RWLHIDMAYPVAQNQRATGYGVALLVEL 526          
BLAST of mRNA_M-pyrifera_M_contig79878.18740.1 vs. uniprot
Match: UPI00106B15F1 (probable aminopeptidase NPEPL1 n=1 Tax=Dendronephthya gigantea TaxID=151771 RepID=UPI00106B15F1)

HSP 1 Score: 279 bits (713), Expect = 5.300e-88
Identity = 150/249 (60.24%), Postives = 178/249 (71.49%), Query Frame = 1
Query:    1 LEHCPEGVDASESCVAMIGKGIVYDSGGLSIKSKTGMPGMKRDCGGACAVLGAFRAIALSGGSAKRICAVLCLAENAVDERSARPDDCYHFYSGKCVEINNTDAEGRLVLADGVAYATKHLNPAVVIDMATLTGAQSIATGRSVGALYTNSEDLGVLCTGAGRDSGDLVHPLPYIPEFWLKEFKSEVADLTNSAADKGNAGSACPAAFIGAHMQSYLDAGGLWAHFDIAAPAHAHKRGTGFGVALLVTI 747
            L H PEG + SE+ +A +GKGIVYD+GGLSIK KT MPGMK DCGGA A+LGAFRA A+  G  K + A+ CLAENAV   S RPDD + FYSGK VEINNTDAEGRL L DGVAYA K L   +V+DMATLTGAQ +ATG+   A+ TNSE+       AGR SGDLVHPLPY PE   +EF S VAD+ NS  ++ NA S+C   FIGAH+    D  G W HFDIAA A + + GTG+GVALL+++
Sbjct:  245 LSHRPEGAETSEN-IAWVGKGIVYDTGGLSIKGKTAMPGMKADCGGAAAILGAFRA-AVKQGFKKNLHALFCLAENAVGPLSTRPDDIHVFYSGKTVEINNTDAEGRLALGDGVAYAAKDLKANIVVDMATLTGAQGVATGQYHAAVVTNSENWEKASVSAGRCSGDLVHPLPYTPELHFQEFSSAVADMKNSVKNRDNAQSSCAGLFIGAHLG--FDFPGDWVHFDIAATAVSGEHGTGYGVALLLSL 489          
BLAST of mRNA_M-pyrifera_M_contig79878.18740.1 vs. uniprot
Match: A0A2E7M784_9DELT (Peptidase M17 n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A2E7M784_9DELT)

HSP 1 Score: 278 bits (710), Expect = 1.020e-87
Identity = 147/249 (59.04%), Postives = 179/249 (71.89%), Query Frame = 1
Query:    1 LEHCPEGVDASESCVAMIGKGIVYDSGGLSIKSKTGMPGMKRDCGGACAVLGAFRAIALSGGSAKRICAVLCLAENAVDERSARPDDCYHFYSGKCVEINNTDAEGRLVLADGVAYATKHLNPAVVIDMATLTGAQSIATGRSVGALYTNSEDLGVLCTGAGRDSGDLVHPLPYIPEFWLKEFKSEVADLTNSAADKGNAGSACPAAFIGAHMQSYLDAGGLWAHFDIAAPAHAHKRGTGFGVALLVTI 747
            L H PEG   ++  +A +GKGIVYD+GGLSIK K  MPGMKRD GGA AVLGAF A A+  G   R+  +LCLAEN+V   + RPDD    YSGK VE+NNTDAEGRLVLADGVA+A +HL P V++D+ATLTGAQ +ATG+  GA+  N ++L      AGR SGDLVHPLPY PEF+  EFKSEVADL NS AD+ NA S+C A F+G H+  +    G W H D+A P+ A +RGTGFGVALL+ +
Sbjct:  242 LRHEPEG---AQRTLAWVGKGIVYDTGGLSIKGKMHMPGMKRDMGGAAAVLGAFGA-AVRAGFPDRLYGLLCLAENSVGPEATRPDDILEMYSGKSVEVNNTDAEGRLVLADGVAHAVRHLGPDVIVDLATLTGAQMVATGQRHGAIVCNDDELEAAAIRAGRVSGDLVHPLPYCPEFFRGEFKSEVADLKNSVADRANAQSSCAAQFVGEHLGDFE---GGWLHVDLAGPSVAKERGTGFGVALLLEL 483          
BLAST of mRNA_M-pyrifera_M_contig79878.18740.1 vs. uniprot
Match: UPI0004D05152 (probable aminopeptidase NPEPL1 isoform X1 n=2 Tax=Galeopterus variegatus TaxID=482537 RepID=UPI0004D05152)

HSP 1 Score: 275 bits (703), Expect = 1.090e-87
Identity = 146/249 (58.63%), Postives = 174/249 (69.88%), Query Frame = 1
Query:    1 LEHCPEGVDASESCVAMIGKGIVYDSGGLSIKSKTGMPGMKRDCGGACAVLGAFRAIALSGGSAKRICAVLCLAENAVDERSARPDDCYHFYSGKCVEINNTDAEGRLVLADGVAYATKHLNPAVVIDMATLTGAQSIATGRSVGALYTNSEDLGVLCTGAGRDSGDLVHPLPYIPEFWLKEFKSEVADLTNSAADKGNAGSACPAAFIGAHMQSYLDAGGLWAHFDIAAPAHAHKRGTGFGVALLVTI 747
            L H PEG   +   +A +GKGIVYD+GGLSIK KT MPGMKRDCGGA A+LGAFRA A+  G    + AV CLAEN+V   + RPDD +  YSGK VEINNTDAEGRLVLADGV+YA K L+  +++DMATLTGAQ IATG+   A+ TNS +    C  AGR  GDLVHPL Y PE    EF S VAD+ NS AD+ N+ S+C   FI +H+    D  G+W H DIAAP HA +R TGFGVALL+ +
Sbjct:  132 LSHTPEGATQT---IAWVGKGIVYDTGGLSIKGKTTMPGMKRDCGGAAAILGAFRA-AIKQGFKDNLHAVFCLAENSVGPNATRPDDIHLLYSGKTVEINNTDAEGRLVLADGVSYACKDLSADIILDMATLTGAQGIATGKHHAAVLTNSAEWEAACVTAGRKCGDLVHPLVYCPELHFSEFTSAVADMKNSVADRDNSPSSCAGLFIASHIG--FDWPGVWVHLDIAAPVHAGERATGFGVALLLAL 374          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig79878.18740.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A812IHE1_9DINO6.040e-9759.13NPEPL1 protein n=1 Tax=Symbiodinium sp. KB8 TaxID=... [more]
A0A812TQK4_SYMMI3.320e-9156.86NPEPL1 protein (Fragment) n=1 Tax=Symbiodinium mic... [more]
UPI001F04CADF3.160e-8959.52probable aminopeptidase NPEPL1 n=1 Tax=Xenia sp. C... [more]
A0A7S4D6D4_HETAK4.530e-8956.03Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A2R5GLB9_9STRA1.570e-8856.97Leucine aminopeptidase 1 n=1 Tax=Hondaea fermental... [more]
M3ZMK3_XIPMA3.370e-8858.23CYTOSOL_AP domain-containing protein n=4 Tax=Ovale... [more]
A0A7R9UC92_9STRA5.040e-8857.03Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
UPI00106B15F15.300e-8860.24probable aminopeptidase NPEPL1 n=1 Tax=Dendronepht... [more]
A0A2E7M784_9DELT1.020e-8759.04Peptidase M17 n=1 Tax=Deltaproteobacteria bacteriu... [more]
UPI0004D051521.090e-8758.63probable aminopeptidase NPEPL1 isoform X1 n=2 Tax=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig79878contigM-pyrifera_M_contig79878:187..957 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeMammalia
Seed ortholog score280.4
Seed ortholog evalue8.4e-73
Seed eggNOG ortholog9818.XP_007949688.1
Preferred nameNPEPL1
KEGG koko:K09611
Hectar predicted targeting categoryother localisation
EggNOG free text desc.aminopeptidase NPEPL1
EggNOG OGs353SC@311790,39REC@33154,3BB5E@33208,3CZXM@33213,3JA6T@40674,482YM@7711,49338@7742,COG0260@1,KOG2597@2759
COG Functional cat.E
Best tax levelAfrotheria
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko01002
Exons1
Model size771
Cds size771
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816702.6665864-CDS-M-pyrifera_M_contig79878:186..9571622816702.6665864-CDS-M-pyrifera_M_contig79878:186..957Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig79878 187..957 -
1692278128.9287736-CDS-M-pyrifera_M_contig79878:186..9571692278128.9287736-CDS-M-pyrifera_M_contig79878:186..957Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig79878 187..957 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig79878.18740.1prot_M-pyrifera_M_contig79878.18740.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig79878 187..957 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig79878.18740.1

>prot_M-pyrifera_M_contig79878.18740.1 ID=prot_M-pyrifera_M_contig79878.18740.1|Name=mRNA_M-pyrifera_M_contig79878.18740.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=257bp
LEHCPEGVDASESCVAMIGKGIVYDSGGLSIKSKTGMPGMKRDCGGACAV
LGAFRAIALSGGSAKRICAVLCLAENAVDERSARPDDCYHFYSGKCVEIN
NTDAEGRLVLADGVAYATKHLNPAVVIDMATLTGAQSIATGRSVGALYTN
SEDLGVLCTGAGRDSGDLVHPLPYIPEFWLKEFKSEVADLTNSAADKGNA
GSACPAAFIGAHMQSYLDAGGLWAHFDIAAPAHAHKRGTGFGVALLVTIC
EKLLLS*
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mRNA from alignment at M-pyrifera_M_contig79878:187..957-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig79878.18740.1 ID=mRNA_M-pyrifera_M_contig79878.18740.1|Name=mRNA_M-pyrifera_M_contig79878.18740.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=771bp|location=Sequence derived from alignment at M-pyrifera_M_contig79878:187..957- (Macrocystis pyrifera P11B4 male)
CTCGAACACTGTCCTGAAGGCGTCGATGCCTCAGAATCGTGCGTGGCAAT GATCGGAAAAGGCATTGTTTACGATTCAGGAGGACTCTCCATCAAGTCCA AGACTGGCATGCCAGGCATGAAGCGGGACTGTGGTGGTGCTTGCGCTGTG TTGGGAGCATTCCGTGCCATTGCACTCAGCGGAGGCTCTGCCAAACGCAT CTGTGCTGTGCTTTGCCTTGCTGAAAATGCCGTCGATGAACGCTCTGCCA GGCCTGATGATTGCTACCACTTTTATTCAGGCAAGTGCGTTGAAATCAAC AACACTGACGCAGAAGGAAGGCTCGTGCTCGCTGATGGTGTTGCGTATGC CACAAAGCACCTCAACCCAGCTGTCGTCATCGACATGGCAACACTCACTG GTGCGCAATCCATTGCAACTGGAAGAAGTGTGGGAGCACTCTACACCAAC TCGGAAGATCTTGGTGTACTCTGTACTGGTGCTGGAAGGGATTCGGGAGA TCTTGTGCACCCTCTACCTTACATTCCAGAGTTTTGGCTCAAGGAATTCA AATCAGAAGTCGCAGACTTGACCAACAGCGCAGCAGACAAGGGAAATGCA GGATCTGCATGCCCTGCAGCCTTCATCGGTGCACACATGCAAAGCTACCT CGATGCAGGTGGGCTCTGGGCACACTTTGACATTGCTGCACCAGCACATG CACACAAGAGAGGAACTGGATTCGGAGTTGCTCTCCTCGTCACAATCTGC GAAAAACTTCTTCTCTCCTAA
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig79878:187..957-

>mRNA_M-pyrifera_M_contig79878.18740.1 ID=mRNA_M-pyrifera_M_contig79878.18740.1|Name=mRNA_M-pyrifera_M_contig79878.18740.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1542bp|location=Sequence derived from alignment at M-pyrifera_M_contig79878:187..957- (Macrocystis pyrifera P11B4 male)
CTCGAACACTGTCCTGAAGGCGTCGATGCCTCAGAATCGTGCGTGGCAAT
GATCGGAAAAGGCATTGTTTACGATTCAGGAGGACTCTCCATCAAGTCCA
AGACTGGCATGCCAGGCATGAAGCGGGACTGTGGTGGTGCTTGCGCTGTG
TTGGGAGCATTCCGTGCCATTGCACTCAGCGGAGGCTCTGCCAAACGCAT
CTGTGCTGTGCTTTGCCTTGCTGAAAATGCCGTCGATGAACGCTCTGCCA
GGCCTGATGATTGCTACCACTTTTATTCAGGCAAGTGCGTTGAAATCAAC
AACACTGACGCAGAAGGAAGGCTCGTGCTCGCTGATGGTGTTGCGTATGC
CACAAAGCACCTCAACCCAGCTGTCGTCATCGACATGGCAACACTCACTG
GTGCGCAATCCATTGCAACTGGAAGAAGTGTGGGAGCACTCTACACCAAC
TCGGAAGATCTTGGTGTACTCTGTACTGGTGCTGGAAGGGATTCGGGAGA
TCTTGTGCACCCTCTACCTTACATTCCAGAGTTTTGGCTCAAGGAATTCA
AATCAGAAGTCGCAGACTTGACCAACAGCGCAGCAGACAAGGGAAATGCA
GGATCTGCATGCCCTGCAGCCTTCATCGGTGCACACATGCAAAGCTACCT
CGATGCAGGTGGGCTCTGGGCACACTTTGACATTGCTGCACCAGCACATG
CACACAAGAGAGGAACTGGATTCGGAGTTGCTCTCCTCGTCACAATCTGC
GAAAAACTTCTTCTCTCCTAACTCGAACACTGTCCTGAAGGCGTCGATGC
CTCAGAATCGTGCGTGGCAATGATCGGAAAAGGCATTGTTTACGATTCAG
GAGGACTCTCCATCAAGTCCAAGACTGGCATGCCAGGCATGAAGCGGGAC
TGTGGTGGTGCTTGCGCTGTGTTGGGAGCATTCCGTGCCATTGCACTCAG
CGGAGGCTCTGCCAAACGCATCTGTGCTGTGCTTTGCCTTGCTGAAAATG
CCGTCGATGAACGCTCTGCCAGGCCTGATGATTGCTACCACTTTTATTCA
GGCAAGTGCGTTGAAATCAACAACACTGACGCAGAAGGAAGGCTCGTGCT
CGCTGATGGTGTTGCGTATGCCACAAAGCACCTCAACCCAGCTGTCGTCA
TCGACATGGCAACACTCACTGGTGCGCAATCCATTGCAACTGGAAGAAGT
GTGGGAGCACTCTACACCAACTCGGAAGATCTTGGTGTACTCTGTACTGG
TGCTGGAAGGGATTCGGGAGATCTTGTGCACCCTCTACCTTACATTCCAG
AGTTTTGGCTCAAGGAATTCAAATCAGAAGTCGCAGACTTGACCAACAGC
GCAGCAGACAAGGGAAATGCAGGATCTGCATGCCCTGCAGCCTTCATCGG
TGCACACATGCAAAGCTACCTCGATGCAGGTGGGCTCTGGGCACACTTTG
ACATTGCTGCACCAGCACATGCACACAAGAGAGGAACTGGATTCGGAGTT
GCTCTCCTCGTCACAATCTGCGAAAAACTTCTTCTCTCCTAA
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