mRNA_M-pyrifera_M_contig78329.18414.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig78329.18414.1 vs. uniprot
Match: A0A7S4HHS2_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Vannella sp. CB-2014 TaxID=1487602 RepID=A0A7S4HHS2_9EUKA) HSP 1 Score: 271 bits (694), Expect = 3.510e-89 Identity = 129/206 (62.62%), Postives = 161/206 (78.16%), Query Frame = 1 Query: 1 VYATADRILEEEGRVHVLVNNAGIVTGRSFLECPDELVEKTMAVNCMAHMWLAKKFLPPMLEADDGQLVNIVSAASTCGVVGLADYCASKWAAFGFDESLRMELRQLGKRGVSTTCVCPFFINTGMFEGVRGSLLLPVLDQHYVVAQVMAATKARAPYCYLPRIVGYMYLLRGLLPAFLFDRLCSFLGISQSMEDFKGRGDSWALG 618 +Y TAD++ EE G+V +LVNNAGIV+G+ FL C D LVE+TMAVN MAHMWLAKKFLPPM+EA+ G +V I SA+ST GV GLADYCASKWAA GFDE++RMEL+Q G GV TTCVCP++INTGMF+GV+ S +P+L +V Q+++A K YLPR VG++YLLR LLP L+D F+GIS++M+ FKGRGD WALG Sbjct: 57 IYETADKVTEEIGKVDILVNNAGIVSGKRFLTCSDVLVERTMAVNIMAHMWLAKKFLPPMIEANHGHIVTISSASSTTGVPGLADYCASKWAATGFDEAIRMELKQDGITGVKTTCVCPYYINTGMFDGVK-SPYIPILKPEWVAGQILSAVKRDKAVLYLPRTVGFVYLLRALLPTSLWDWFAKFIGISKTMDSFKGRGDQWALG 261
BLAST of mRNA_M-pyrifera_M_contig78329.18414.1 vs. uniprot
Match: A0A812L3P4_9DINO (SDR16C5 protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812L3P4_9DINO) HSP 1 Score: 222 bits (566), Expect = 1.020e-68 Identity = 113/207 (54.59%), Postives = 141/207 (68.12%), Query Frame = 1 Query: 1 VYATADRILEEEGRVHVLVNNAGIVTGRSFLECPDELVEKTMAVNCMAHMWLAKKFLPPMLEADDGQLVNIVSAASTCGVVGLADYCASKWAAFGFDESLRMELRQLGKRGVSTTCVCPFFINTGMFEGV--RGSLLLPVLDQHYVVAQVMAATKARAPYCYLPRIVGYMYLLRGLLPAFLFDRLCSFLGISQSMEDFKGRGDSWAL 615 VY A +L E RV +LVNNAGIV+G+SFL+ DE VEKT AVN +AH W K FLP M++ + G +V I SA+S GVVGL+DY ASKWAAFGFDESLR+E R+ G G+ TTC+CP++INTGMFEGV R S LLP+L +V V+ A + LP +V + R LLP ++D FLGIS SM+DF GRGDS A+ Sbjct: 105 VYKAAGEVLREFARVDILVNNAGIVSGKSFLDNDDEKVEKTFAVNTLAHFWSVKAFLPGMVDRNHGHIVTISSASSQSGVVGLSDYAASKWAAFGFDESLRLEFRKKGYTGLHTTCICPYYINTGMFEGVASRFSFLLPLLQPEFVADSVVTAVRRNTAVVMLPSLVWFTGTFRLLLPTSVYDSAMEFLGISASMDDFVGRGDSVAM 311
BLAST of mRNA_M-pyrifera_M_contig78329.18414.1 vs. uniprot
Match: UPI001EE62E14 (epidermal retinol dehydrogenase 2-like n=1 Tax=Haliotis rubra TaxID=36100 RepID=UPI001EE62E14) HSP 1 Score: 217 bits (553), Expect = 3.350e-67 Identity = 111/201 (55.22%), Postives = 136/201 (67.66%), Query Frame = 1 Query: 1 VYATADRILEEEGRVHVLVNNAGIVTGRSFLECPDELVEKTMAVNCMAHMWLAKKFLPPMLEADDGQLVNIVSAASTCGVVGLADYCASKWAAFGFDESLRMELRQLGKRGVSTTCVCPFFINTGMFEGVRGS--LLLPVLDQHYVVAQVMAATKARAPYCYLPRIVGYMYLLRGLLPAFLFDRLCSFLGISQSMEDFKGR 597 +Y TA+++ + G V +LVNNAGIVTG+ FLEC DEL++KTM VN MAH W K F+P MLE + G +VNI SAA CGV LADY ASK+AA GFDESLRME +GK GV TT VCPF+INTGMFEGVR LLLP+LD YV +++ + LP V L+G+LP L FLGI+ +ME+FKGR Sbjct: 102 IYDTAEQVKRDVGEVDILVNNAGIVTGKKFLECKDELIQKTMDVNIMAHFWTVKCFVPGMLERNHGHIVNIASAAGLCGVNSLADYSASKFAAVGFDESLRMEFSSMGKTGVHTTVVCPFYINTGMFEGVRTRFPLLLPILDPDYVADSIISGVLTNSHVVMLPPAVALASALKGILPVKCAMLLNDFLGINHTMENFKGR 302
BLAST of mRNA_M-pyrifera_M_contig78329.18414.1 vs. uniprot
Match: V3ZYK3_LOTGI (Uncharacterized protein n=1 Tax=Lottia gigantea TaxID=225164 RepID=V3ZYK3_LOTGI) HSP 1 Score: 215 bits (548), Expect = 2.020e-66 Identity = 105/203 (51.72%), Postives = 137/203 (67.49%), Query Frame = 1 Query: 1 VYATADRILEEEGRVHVLVNNAGIVTGRSFLECPDELVEKTMAVNCMAHMWLAKKFLPPMLEADDGQLVNIVSAASTCGVVGLADYCASKWAAFGFDESLRMELRQLGKRGVSTTCVCPFFINTGMFEG--VRGSLLLPVLDQHYVVAQVMAATKARAPYCYLPRIVGYMYLLRGLLPAFLFDRLCSFLGISQSMEDFKGRGD 603 +Y A+++ E G+V VLVNNAGIVTGR FL+CPD L++KTM VN +AH W K FLP M++ + G +V + S+A GV GLADYCASK+AA GFDES+R EL +LGK GV TT VCPF INTGMF+G + LLLP+LD Y V +M A LP+ + ++ L+G+LP L +F +S M+DFKGRG+ Sbjct: 102 IYKAAEKVRTEVGQVDVLVNNAGIVTGRKFLDCPDSLIQKTMEVNSVAHFWTVKAFLPTMIQRNHGHIVTLASSAGLVGVSGLADYCASKYAAVGFDESIRFELEKLGKDGVHTTVVCPFLINTGMFDGCIAKFPLLLPILDPDYAVDSIMTAILINQEIIVLPKSLYLVFALKGILPTKCSHILSNFFEVSNCMDDFKGRGE 304
BLAST of mRNA_M-pyrifera_M_contig78329.18414.1 vs. uniprot
Match: A0A6P7SB76_OCTVU (epidermal retinol dehydrogenase 2 isoform X1 n=2 Tax=Octopus vulgaris TaxID=6645 RepID=A0A6P7SB76_OCTVU) HSP 1 Score: 215 bits (548), Expect = 2.210e-66 Identity = 105/201 (52.24%), Postives = 135/201 (67.16%), Query Frame = 1 Query: 1 VYATADRILEEEGRVHVLVNNAGIVTGRSFLECPDELVEKTMAVNCMAHMWLAKKFLPPMLEADDGQLVNIVSAASTCGVVGLADYCASKWAAFGFDESLRMELRQLGKRGVSTTCVCPFFINTGMFEGV--RGSLLLPVLDQHYVVAQVMAATKARAPYCYLPRIVGYMYLLRGLLPAFLFDRLCSFLGISQSMEDFKGR 597 +Y TA ++ E+ G VH+L+NNAGIVTGR FLECPDEL+EKT+ VN MAH W K FLP M++ + G +V + SAA GV L DYCASK+A GF+ESLR EL LGK GV TT VCPF+INTGMF GV R L+P+L+ YV +++ A + Y+PR++ Y L+G+LP L F G+S ME FKG+ Sbjct: 105 IYETARKVNEDIGMVHILINNAGIVTGRKFLECPDELIEKTIDVNTMAHFWTVKAFLPAMIKENHGHVVTVASAAGLLGVNSLTDYCASKFAVVGFEESLRFELEVLGKDGVHTTVVCPFYINTGMFNGVKVRFPYLMPILEPGYVSDKIVEAVRCNTHILYIPRLLYYTLGLKGILPHKCISLLARFFGVSTDMEKFKGK 305
BLAST of mRNA_M-pyrifera_M_contig78329.18414.1 vs. uniprot
Match: UPI00071E2059 (epidermal retinol dehydrogenase 2-like n=1 Tax=Octopus bimaculoides TaxID=37653 RepID=UPI00071E2059) HSP 1 Score: 212 bits (540), Expect = 4.370e-66 Identity = 103/201 (51.24%), Postives = 135/201 (67.16%), Query Frame = 1 Query: 1 VYATADRILEEEGRVHVLVNNAGIVTGRSFLECPDELVEKTMAVNCMAHMWLAKKFLPPMLEADDGQLVNIVSAASTCGVVGLADYCASKWAAFGFDESLRMELRQLGKRGVSTTCVCPFFINTGMFEGV--RGSLLLPVLDQHYVVAQVMAATKARAPYCYLPRIVGYMYLLRGLLPAFLFDRLCSFLGISQSMEDFKGR 597 +Y TA ++ E+ G VH+L+NNAGIVTGR FL+CPDEL++KT+ VN MAH W K FLP M++ + G +V + SAA GV L DYCASK+A GF+ESLR EL LGK GV TT VCPF+INTGMF GV R L+P+L+ YV +++ A + Y+PR++ Y L+G LP +C+F +QSME F GR Sbjct: 38 IYETARKVNEDIGMVHILINNAGIVTGRKFLQCPDELIQKTIDVNTMAHFWTVKAFLPTMIKENHGHVVTVASAAGLLGVNSLTDYCASKFAVVGFEESLRFELEVLGKDGVHTTVVCPFYINTGMFNGVKVRFPYLMPILEPGYVSDKIVEAVRCNTHILYIPRLLYYTLGLKGYLPVRCMSVVCNFFATTQSMETFIGR 238
BLAST of mRNA_M-pyrifera_M_contig78329.18414.1 vs. uniprot
Match: UPI00065BC0B1 (protein dhs-3 n=1 Tax=Aplysia californica TaxID=6500 RepID=UPI00065BC0B1) HSP 1 Score: 214 bits (544), Expect = 8.360e-66 Identity = 106/201 (52.74%), Postives = 133/201 (66.17%), Query Frame = 1 Query: 1 VYATADRILEEEGRVHVLVNNAGIVTGRSFLECPDELVEKTMAVNCMAHMWLAKKFLPPMLEADDGQLVNIVSAASTCGVVGLADYCASKWAAFGFDESLRMELRQLGKRGVSTTCVCPFFINTGMFEGVRGSL--LLPVLDQHYVVAQVMAATKARAPYCYLPRIVGYMYLLRGLLPAFLFDRLCSFLGISQSMEDFKGR 597 +Y TA ++ + G V VLVNNAGIVTGR FL+CPD LVEKTM VN AH W K FLP M+E + G +V I S+A GV LADYCASK+ A GFDES+R E+ + K GV TT VCPFFI TGMFEG + LLP+L+ Y ++M A + P PR++ +Y LRG+ P+ + D L F+GIS SM+DF GR Sbjct: 103 IYETAAKVKADVGNVDVLVNNAGIVTGRKFLDCPDGLVEKTMEVNTNAHFWTTKSFLPEMMERNHGHIVTIASSAGLFGVATLADYCASKFGAVGFDESIRSEMLKYRKTGVHTTVVCPFFIKTGMFEGAKSRFPWLLPLLEPEYAADKIMDAVRTNQPMLCAPRVLYLLYFLRGVFPSTVADVLAEFIGISASMDDFVGR 303
BLAST of mRNA_M-pyrifera_M_contig78329.18414.1 vs. uniprot
Match: UPI001B88A2E5 (epidermal retinol dehydrogenase 2-like n=1 Tax=Gigantopelta aegis TaxID=1735272 RepID=UPI001B88A2E5) HSP 1 Score: 213 bits (541), Expect = 2.370e-65 Identity = 103/201 (51.24%), Postives = 137/201 (68.16%), Query Frame = 1 Query: 1 VYATADRILEEEGRVHVLVNNAGIVTGRSFLECPDELVEKTMAVNCMAHMWLAKKFLPPMLEADDGQLVNIVSAASTCGVVGLADYCASKWAAFGFDESLRMELRQLGKRGVSTTCVCPFFINTGMFEGVRGSL--LLPVLDQHYVVAQVMAATKARAPYCYLPRIVGYMYLLRGLLPAFLFDRLCSFLGISQSMEDFKGR 597 +Y TAD + EE G+V +LVNNAGIVTG+ F++CPD LV+KTM VNCMAH W K F+P M+E + G +VNI S+A G+ GLADYCASK+AA GFDESLR EL LGK GV TT VCP+ I+TGMFEG + LLP D V +++ A A ++PR++ + +++GLLP +C FL +++ M+ F GR Sbjct: 102 IYHTADMVKEELGQVDILVNNAGIVTGKKFMQCPDSLVQKTMEVNCMAHFWTVKAFMPAMMEHNHGHIVNIASSAGLIGITGLADYCASKFAAVGFDESLRFELLDLGKDGVHTTVVCPYLISTGMFEGCKSFFPWLLPPSDPEDVADRIIDAILCNAHIVFIPRVLHVLLVIKGLLPTKGIRLVCQFLKVNRHMDSFIGR 302
BLAST of mRNA_M-pyrifera_M_contig78329.18414.1 vs. uniprot
Match: UPI00201EBCAF (epidermal retinol dehydrogenase 2-like n=1 Tax=Haliotis rufescens TaxID=6454 RepID=UPI00201EBCAF) HSP 1 Score: 212 bits (540), Expect = 3.070e-65 Identity = 105/201 (52.24%), Postives = 136/201 (67.66%), Query Frame = 1 Query: 1 VYATADRILEEEGRVHVLVNNAGIVTGRSFLECPDELVEKTMAVNCMAHMWLAKKFLPPMLEADDGQLVNIVSAASTCGVVGLADYCASKWAAFGFDESLRMELRQLGKRGVSTTCVCPFFINTGMFEGV--RGSLLLPVLDQHYVVAQVMAATKARAPYCYLPRIVGYMYLLRGLLPAFLFDRLCSFLGISQSMEDFKGR 597 +Y TA+++ + G V +LVNNAGIVTG+ FLEC DEL++KTM VN MAH W K F+P MLE + G +VNI SAA GV GLADYCASK+AA GFDESLRME + K GV TT +CPF+INTGMFEGV R LLLP+LD YV ++ LP + ++ L+G++P L +F G++ +M++FKGR Sbjct: 102 IYDTAEQVKRDVGEVDILVNNAGIVTGKKFLECKDELIQKTMDVNIMAHFWTVKCFVPGMLERNHGHIVNIASAAGISGVNGLADYCASKFAAVGFDESLRMEFLSMEKTGVHTTVICPFYINTGMFEGVQTRFPLLLPILDPDYVADSIINGVLTNTHIVMLPPAIAFVAALKGIIPVKCGMILSNFFGVNHTMDNFKGR 302
BLAST of mRNA_M-pyrifera_M_contig78329.18414.1 vs. uniprot
Match: UPI001E1DAA2F (protein dhs-3-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1DAA2F) HSP 1 Score: 211 bits (537), Expect = 1.040e-64 Identity = 102/201 (50.75%), Postives = 135/201 (67.16%), Query Frame = 1 Query: 1 VYATADRILEEEGRVHVLVNNAGIVTGRSFLECPDELVEKTMAVNCMAHMWLAKKFLPPMLEADDGQLVNIVSAASTCGVVGLADYCASKWAAFGFDESLRMELRQLGKRGVSTTCVCPFFINTGMFEGV--RGSLLLPVLDQHYVVAQVMAATKARAPYCYLPRIVGYMYLLRGLLPAFLFDRLCSFLGISQSMEDFKGR 597 V+ A+++ EE G++ +LVNNAGIVTG+ FL+C D +++KTM VN MAH W K FLP M++ + G +VNI S+A GV GLADYCASK+AA GFDESLR EL LGK G+ TT VCPFFINTGMFEG R LLLP+++ Y +V+ A +PRI+ + + ++G LP + L I+ M+DFKGR Sbjct: 107 VFNVANKVKEEVGQIDILVNNAGIVTGKKFLDCSDTMIQKTMEVNTMAHFWTVKSFLPDMIKRNHGHIVNIASSAGLVGVTGLADYCASKFAAVGFDESLRFELESLGKDGIYTTVVCPFFINTGMFEGAKTRFPLLLPIVEPEYAANKVVDAVLCNQAMLLIPRILYFFFAIKGFLPTSCLHVISKHLCINNCMDDFKGR 307 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig78329.18414.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig78329.18414.1 >prot_M-pyrifera_M_contig78329.18414.1 ID=prot_M-pyrifera_M_contig78329.18414.1|Name=mRNA_M-pyrifera_M_contig78329.18414.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=208bp VYATADRILEEEGRVHVLVNNAGIVTGRSFLECPDELVEKTMAVNCMAHMback to top mRNA from alignment at M-pyrifera_M_contig78329:2..845+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig78329.18414.1 ID=mRNA_M-pyrifera_M_contig78329.18414.1|Name=mRNA_M-pyrifera_M_contig78329.18414.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=844bp|location=Sequence derived from alignment at M-pyrifera_M_contig78329:2..845+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig78329:2..845+ >mRNA_M-pyrifera_M_contig78329.18414.1 ID=mRNA_M-pyrifera_M_contig78329.18414.1|Name=mRNA_M-pyrifera_M_contig78329.18414.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1248bp|location=Sequence derived from alignment at M-pyrifera_M_contig78329:2..845+ (Macrocystis pyrifera P11B4 male)back to top |