mRNA_M-pyrifera_M_contig78134.18368.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig78134.18368.1 vs. uniprot
Match: A0A7K2CTK5_9ACTN (SDR family oxidoreductase n=6 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A7K2CTK5_9ACTN) HSP 1 Score: 216 bits (550), Expect = 1.190e-67 Identity = 107/129 (82.95%), Postives = 118/129 (91.47%), Query Frame = 1 Query: 1 GPPFPTNKPAKAGFVYGAPKAALNRLTVAAASECEGQGIAVNALAPQAAIATPALVEAGWVDSDMFEPLETMAEAALALCTGDPDVLTGRIAFSLQLLAELDRPVRDLHGEQLVEGWQPADLTAVIAAQ 387 GPPFPT+KP+KAGFVYGAPKAALN+LTV+AASECEGQG++VNAL PQAAIATP LVEAGW+D DMFEPL+TMAEAALAL TGDPD+LTGRIAFSLQLL EL+RPVRDL GE LVEGWQPAD+ IA Q Sbjct: 189 GPPFPTSKPSKAGFVYGAPKAALNKLTVSAASECEGQGVSVNALTPQAAIATPILVEAGWIDEDMFEPLDTMAEAALALVTGDPDLLTGRIAFSLQLLVELNRPVRDLMGESLVEGWQPADIPTAIARQ 317
BLAST of mRNA_M-pyrifera_M_contig78134.18368.1 vs. uniprot
Match: A0A6B0WP47_9ACTN (SDR family oxidoreductase n=6 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A6B0WP47_9ACTN) HSP 1 Score: 202 bits (514), Expect = 1.190e-62 Identity = 103/129 (79.84%), Postives = 111/129 (86.05%), Query Frame = 1 Query: 1 GPPFPTNKPAKAGFVYGAPKAALNRLTVAAASECEGQGIAVNALAPQAAIATPALVEAGWVDSDMFEPLETMAEAALALCTGDPDVLTGRIAFSLQLLAELDRPVRDLHGEQLVEGWQPADLTAVIAAQ 387 GPPFPTNKP+KAG +YGA KAALNRLTV+ ASECEGQGIAVNAL+PQ AIATPALV AGWV+ MFEPLETMAEA LALCT DP VLTGRIAFSLQLL EL RPV DL GE+L+EGWQP DL +IA Q Sbjct: 154 GPPFPTNKPSKAGAMYGASKAALNRLTVSVASECEGQGIAVNALSPQGAIATPALVAAGWVEGVMFEPLETMAEATLALCTADPAVLTGRIAFSLQLLVELQRPVLDLRGEELLEGWQPEDLPGIIARQ 282
BLAST of mRNA_M-pyrifera_M_contig78134.18368.1 vs. uniprot
Match: A0A7K1EBN4_9ACTN (SDR family NAD(P)-dependent oxidoreductase (Fragment) n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A7K1EBN4_9ACTN) HSP 1 Score: 199 bits (506), Expect = 1.250e-61 Identity = 102/129 (79.07%), Postives = 110/129 (85.27%), Query Frame = 1 Query: 1 GPPFPTNKPAKAGFVYGAPKAALNRLTVAAASECEGQGIAVNALAPQAAIATPALVEAGWVDSDMFEPLETMAEAALALCTGDPDVLTGRIAFSLQLLAELDRPVRDLHGEQLVEGWQPADLTAVIAAQ 387 GPPFPTNKPA GF YGA KAALNRLT+AAASE GQGIA NAL PQAAIATP LV+AGW+ MFEPLETMAEAALALCTGDP++LTGRIAFSLQLL EL RPV DL GE+LV+GWQP+DL VI AQ Sbjct: 154 GPPFPTNKPATGGFQYGASKAALNRLTIAAASETHGQGIAANALTPQAAIATPELVKAGWIRGPMFEPLETMAEAALALCTGDPEILTGRIAFSLQLLVELGRPVYDLLGEELVDGWQPSDLPHVIQAQ 282
BLAST of mRNA_M-pyrifera_M_contig78134.18368.1 vs. uniprot
Match: A0A6B1E9M9_9ACTN (SDR family oxidoreductase n=2 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A6B1E9M9_9ACTN) HSP 1 Score: 199 bits (506), Expect = 1.930e-61 Identity = 103/129 (79.84%), Postives = 111/129 (86.05%), Query Frame = 1 Query: 1 GPPFPTNKPAKAGFVYGAPKAALNRLTVAAASECEGQGIAVNALAPQAAIATPALVEAGWVDSDMFEPLETMAEAALALCTGDPDVLTGRIAFSLQLLAELDRPVRDLHGEQLVEGWQPADLTAVIAAQ 387 GPPFPTNKP+KAG +YGA KAALNRLTV+ ASECEGQGIAVNALAPQ AIATP+LV AGWV+ M EPLETMAEAALALCTGDPD LTGRIAFSLQLL EL RPV DL GE LV+GWQP DL +I+ Q Sbjct: 154 GPPFPTNKPSKAGAMYGATKAALNRLTVSVASECEGQGIAVNALAPQGAIATPSLVAAGWVEGVMLEPLETMAEAALALCTGDPDRLTGRIAFSLQLLVELRRPVFDLLGESLVDGWQPEDLPDIISRQ 282
BLAST of mRNA_M-pyrifera_M_contig78134.18368.1 vs. uniprot
Match: A0A6J7N2W4_9ZZZZ (Unannotated protein n=1 Tax=freshwater metagenome TaxID=449393 RepID=A0A6J7N2W4_9ZZZZ) HSP 1 Score: 198 bits (504), Expect = 5.300e-61 Identity = 101/129 (78.29%), Postives = 109/129 (84.50%), Query Frame = 1 Query: 1 GPPFPTNKPAKAGFVYGAPKAALNRLTVAAASECEGQGIAVNALAPQAAIATPALVEAGWVDSDMFEPLETMAEAALALCTGDPDVLTGRIAFSLQLLAELDRPVRDLHGEQLVEGWQPADLTAVIAAQ 387 GPPFPTNKPA GFVYG+ KAALNRLTVAAASE GQGIAVN L PQAAIATPAL+E GW+D M+EP++TMAEAALAL TGDP VLTGRIA+SLQLL EL RPV DLHG LVEGWQPAD+ AVI Q Sbjct: 165 GPPFPTNKPATGGFVYGSAKAALNRLTVAAASETHGQGIAVNGLTPQAAIATPALIEGGWIDDTMYEPMDTMAEAALALVTGDPAVLTGRIAYSLQLLVELRRPVYDLHGVALVEGWQPADIPAVITRQ 293
BLAST of mRNA_M-pyrifera_M_contig78134.18368.1 vs. uniprot
Match: A0A6I2ZV68_9ACTN (SDR family NAD(P)-dependent oxidoreductase n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A6I2ZV68_9ACTN) HSP 1 Score: 198 bits (504), Expect = 4.980e-60 Identity = 101/129 (78.29%), Postives = 109/129 (84.50%), Query Frame = 1 Query: 1 GPPFPTNKPAKAGFVYGAPKAALNRLTVAAASECEGQGIAVNALAPQAAIATPALVEAGWVDSDMFEPLETMAEAALALCTGDPDVLTGRIAFSLQLLAELDRPVRDLHGEQLVEGWQPADLTAVIAAQ 387 GPPFPTNKPA GFVYG+ KAALNRLTVAAASE GQGIAVN L PQAAIATPAL+E GW+D M+EP++TMAEAALAL TGDP VLTGRIA+SLQLL EL RPV DLHG LVEGWQPAD+ AVI Q Sbjct: 249 GPPFPTNKPATGGFVYGSAKAALNRLTVAAASETHGQGIAVNGLTPQAAIATPALIEGGWIDDTMYEPMDTMAEAALALVTGDPAVLTGRIAYSLQLLVELRRPVYDLHGVALVEGWQPADIPAVITRQ 377
BLAST of mRNA_M-pyrifera_M_contig78134.18368.1 vs. uniprot
Match: A0A538D8Q1_9ACTN (SDR family oxidoreductase n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A538D8Q1_9ACTN) HSP 1 Score: 194 bits (493), Expect = 5.090e-59 Identity = 99/129 (76.74%), Postives = 106/129 (82.17%), Query Frame = 1 Query: 1 GPPFPTNKPAKAGFVYGAPKAALNRLTVAAASECEGQGIAVNALAPQAAIATPALVEAGWVDSDMFEPLETMAEAALALCTGDPDVLTGRIAFSLQLLAELDRPVRDLHGEQLVEGWQPADLTAVIAAQ 387 GPPFP+N+PAK+G YGA KAALNRLT+A ASECEGQGI+VNAL PQAAIATPAL AGW+D MFEPLETMAEAALAL TGDP VLTGRIAFSLQLL EL RPV DL G LV+GWQP DL I Q Sbjct: 192 GPPFPSNRPAKSGAAYGASKAALNRLTIAVASECEGQGISVNALTPQAAIATPALASAGWIDQVMFEPLETMAEAALALITGDPAVLTGRIAFSLQLLLELQRPVHDLDGRDLVDGWQPRDLRTAIERQ 320
BLAST of mRNA_M-pyrifera_M_contig78134.18368.1 vs. uniprot
Match: A0A538DJ86_9ACTN (SDR family oxidoreductase (Fragment) n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A538DJ86_9ACTN) HSP 1 Score: 157 bits (396), Expect = 1.460e-45 Identity = 79/92 (85.87%), Postives = 84/92 (91.30%), Query Frame = 1 Query: 1 GPPFPTNKPAKAGFVYGAPKAALNRLTVAAASECEGQGIAVNALAPQAAIATPALVEAGWVDSDMFEPLETMAEAALALCTGDPDVLTGRIA 276 GPPFPTNKPAK GFVYG+ KAALNRLTVAAASECEGQGIAVNAL PQAAIATP+LV GW+D MFEPLETM EAA+ALCTGDP+VLTGRIA Sbjct: 154 GPPFPTNKPAKGGFVYGSAKAALNRLTVAAASECEGQGIAVNALTPQAAIATPSLVAGGWIDDIMFEPLETMGEAAVALCTGDPNVLTGRIA 245
BLAST of mRNA_M-pyrifera_M_contig78134.18368.1 vs. uniprot
Match: A0A7X6NZ68_9ACTN (SDR family oxidoreductase n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A7X6NZ68_9ACTN) HSP 1 Score: 152 bits (385), Expect = 3.300e-43 Identity = 84/129 (65.12%), Postives = 93/129 (72.09%), Query Frame = 1 Query: 1 GPPFPTNKPAKAGFVYGAPKAALNRLTVAAASECEGQGIAVNALAPQAAIATPALVEAGWVDSDMFEPLETMAEAALALCTGDPDVLTGRIAFSLQLLAELDRPVRDLHGEQLVEGWQPADLTAVIAAQ 387 GPPFPT K A G YG KAALNRLT + A+E GIAVNALAPQAAIATP L+E+G V +D FEPLETMAEA LAL T DP L+GRI S++LL ELDRPV L G LV+GWQP DL A I Q Sbjct: 162 GPPFPTTKVALEGSGYGVTKAALNRLTTSVAAELNPHGIAVNALAPQAAIATPHLLESGTVPADRFEPLETMAEATLALATADPRTLSGRITRSIELLRELDRPVHTLDGTALVDGWQPQDLDAFIEHQ 290
BLAST of mRNA_M-pyrifera_M_contig78134.18368.1 vs. uniprot
Match: A0A3D1GMZ3_9GAMM (Uncharacterized protein n=6 Tax=Halieaceae TaxID=1706372 RepID=A0A3D1GMZ3_9GAMM) HSP 1 Score: 143 bits (360), Expect = 2.760e-39 Identity = 77/132 (58.33%), Postives = 91/132 (68.94%), Query Frame = 1 Query: 1 GPPFPTNKPAKAGFVYGAPKAALNRLTVAAASECEGQGIAVNALAPQAAIATPALVE---AGWVDSDMFEPLETMAEAALALCTGDPDVLTGRIAFSLQLLAELDRPVRDLHGEQLVEGWQPADLTAVIAAQ 387 GPPF PA+AG YGA KAALNR+TV A+E EG G+ VNAL PQAA+ TP L + AG++D+D FEPLETM EAA LCT L GRI +SL+LL EL +PVRD G +LV WQPADL A + Q Sbjct: 165 GPPFGKTAPAQAGSAYGASKAALNRMTVGLAAEVEGTGVTVNALTPQAAVLTPELAQVRDAGYLDADFFEPLETMVEAATVLCTTRDPALHGRIVYSLELLLELGQPVRDFTGTELVTDWQPADLPAQLRRQ 296 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig78134.18368.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig78134.18368.1 >prot_M-pyrifera_M_contig78134.18368.1 ID=prot_M-pyrifera_M_contig78134.18368.1|Name=mRNA_M-pyrifera_M_contig78134.18368.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=129bp GPPFPTNKPAKAGFVYGAPKAALNRLTVAAASECEGQGIAVNALAPQAAIback to top mRNA from alignment at M-pyrifera_M_contig78134:604..990- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig78134.18368.1 ID=mRNA_M-pyrifera_M_contig78134.18368.1|Name=mRNA_M-pyrifera_M_contig78134.18368.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=387bp|location=Sequence derived from alignment at M-pyrifera_M_contig78134:604..990- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig78134:604..990- >mRNA_M-pyrifera_M_contig78134.18368.1 ID=mRNA_M-pyrifera_M_contig78134.18368.1|Name=mRNA_M-pyrifera_M_contig78134.18368.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=774bp|location=Sequence derived from alignment at M-pyrifera_M_contig78134:604..990- (Macrocystis pyrifera P11B4 male)back to top |