mRNA_M-pyrifera_M_contig78124.18363.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig78124.18363.1
Unique NamemRNA_M-pyrifera_M_contig78124.18363.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
[Close]
BLAST of mRNA_M-pyrifera_M_contig78124.18363.1 vs. uniprot
Match: A0A7Y2IGE8_9ACTN (Methionine--tRNA ligase n=1 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A7Y2IGE8_9ACTN)

HSP 1 Score: 565 bits (1456), Expect = 1.770e-198
Identity = 262/335 (78.21%), Postives = 294/335 (87.76%), Query Frame = 1 
Query:    1 DLYTTTGTENHAKVTQEMFLAQLENGHIDKRISEQFFDPEAQRFLPDRYIEGTCPNCGYTDARGDQCDNCGKTYDATELLEPRSKISGATPELRETEHFYYRFSDFNEQIRTWLQSRKGWRPHVLNFALGWTEEGEGLQDRAITRDLDWGVELPVDDLGPGKRIYVWYDAVIGYLSASKEWAAAQ----GDPELWRHWWENDDARHVYFVGKDNIPFHCLFWPAQLMGAGNLHLPDNVPANQYVTFKGGKASASRGIGLTIEQGLDLFEPDALRFALAAALPEQSDTEISVEEIARRINEELVATYGNLVNRVLSMVHKNGEGAVP-TPGEFTDD 990
            DLYTTTGTENHAKVTQEMFLAQ ENGHIDKR+SEQFFDPE QRFLPDRY+EG CP CGY +ARGDQCDNCGKT D  +L+ PRSK+SGA PE RETEHFY+R+SDFN+QIR +L ++  WRPHVLNFA GW E+ EGLQDRAITRD++WG++LPVDDLGPGK+IYVWYDAVIGYLSASKEWAA++    GDPE WR WWEN  ARHVYF+GKDNIPFH LFWPAQLMG GNLHLPD +PANQYVTFKGGKASASRG+GLTI   LD+F+PDALRFALAAALPEQ+DTE+S EEI RRINEELVAT+GNLVNRVLSMV+KN +  +P TPG   +D
Sbjct:   98 DLYTTTGTENHAKVTQEMFLAQFENGHIDKRVSEQFFDPEVQRFLPDRYVEGECPYCGYAEARGDQCDNCGKTLDPIDLINPRSKLSGAIPEPRETEHFYFRYSDFNQQIRNYLDTKSHWRPHVLNFAKGWLED-EGLQDRAITRDIEWGIDLPVDDLGPGKKIYVWYDAVIGYLSASKEWAASETNPAGDPESWREWWENPAARHVYFIGKDNIPFHALFWPAQLMGVGNLHLPDEIPANQYVTFKGGKASASRGVGLTIADALDMFQPDALRFALAAALPEQADTEVSDEEIGRRINEELVATWGNLVNRVLSMVNKNCDAQIPDTPGSDPED 431
[Close]
BLAST of mRNA_M-pyrifera_M_contig78124.18363.1 vs. uniprot
Match: A0A6B1B1C2_9ACTN (Methionine--tRNA ligase n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A6B1B1C2_9ACTN)

HSP 1 Score: 549 bits (1415), Expect = 1.840e-192
Identity = 251/330 (76.06%), Postives = 289/330 (87.58%), Query Frame = 1 
Query:    1 DLYTTTGTENHAKVTQEMFLAQLENGHIDKRISEQFFDPEAQRFLPDRYIEGTCPNCGYTDARGDQCDNCGKTYDATELLEPRSKISGATPELRETEHFYYRFSDFNEQIRTWLQSRKGWRPHVLNFALGWTEEGEGLQDRAITRDLDWGVELPVDDLGPGKRIYVWYDAVIGYLSASKEWAAAQGDPELWRHWWENDDARHVYFVGKDNIPFHCLFWPAQLMGAGNLHLPDNVPANQYVTFKGGKASASRGIGLTIEQGLDLFEPDALRFALAAALPEQSDTEISVEEIARRINEELVATYGNLVNRVLSMVHKNGEGAVPTPGEFTDD 990
            DL+TTTGTENHA+VTQEMFLAQL+NGHID+R+SEQ++D  A RFLPDRYIEGTCP+CGYT+ARGDQCD+CG+T DA +L +PRSKISGA PE RETEHFY+R+SDF EQ+    + +  WRPHVLNF LG+  EG  L DRAITRD++WG+ELPVDDLGPGKRIYVWYDAVIGYLSASKEW+A QGD E WRHWWENDD+RHVYF+GKDNIPFHCLFWPAQL+GAGNLHLPD+VPANQYVTFKGGKASASRG+GLTI++GL LFEPD LR+ALAA  PEQ+DTE+S+E IARRINEELVAT+GNLVNRVLSM+H N     P+     +D
Sbjct:   91 DLFTTTGTENHARVTQEMFLAQLQNGHIDRRVSEQYYDATADRFLPDRYIEGTCPHCGYTEARGDQCDDCGQTLDALDLGDPRSKISGAVPERRETEHFYFRYSDFTEQLAEIYKDKSHWRPHVLNFVLGYIREG--LLDRAITRDIEWGIELPVDDLGPGKRIYVWYDAVIGYLSASKEWSAQQGDDEAWRHWWENDDSRHVYFIGKDNIPFHCLFWPAQLIGAGNLHLPDDVPANQYVTFKGGKASASRGVGLTIDEGLALFEPDGLRYALAANFPEQADTEVSIESIARRINEELVATWGNLVNRVLSMLHNNHGVQPPSEDRTAED 418
[Close]
BLAST of mRNA_M-pyrifera_M_contig78124.18363.1 vs. uniprot
Match: A0A7Y2GSW1_9ACTN (Methionine--tRNA ligase n=1 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A7Y2GSW1_9ACTN)

HSP 1 Score: 549 bits (1415), Expect = 2.120e-192
Identity = 253/335 (75.52%), Postives = 292/335 (87.16%), Query Frame = 1 
Query:    1 DLYTTTGTENHAKVTQEMFLAQLENGHIDKRISEQFFDPEAQRFLPDRYIEGTCPNCGYTDARGDQCDNCGKTYDATELLEPRSKISGATPELRETEHFYYRFSDFNEQIRTWLQSRKGWRPHVLNFALGWTEEGEGLQDRAITRDLDWGVELPVDDLGPGKRIYVWYDAVIGYLSASKEWAAAQ----GDPELWRHWWENDDARHVYFVGKDNIPFHCLFWPAQLMGAGNLHLPDNVPANQYVTFKGGKASASRGIGLTIEQGLDLFEPDALRFALAAALPEQSDTEISVEEIARRINEELVATYGNLVNRVLSMVHKNGEGAVP-TPGEFTDD 990
            DLYTTTGT+NHA++TQ MFLAQL NGHIDKR +EQ+FDPEA+RFL DRYIEG CP+CGY DARGDQCDNCG+T D  +L+ PRSK+SGATP  R T+HF+YR+SDF + +R +L  +  WRPHV+NFA GW E+ EGL DRAITRD+DWG+++PVDDLGPGK+IYVWYDAVIGYLSAS+EWAA+     G+P+ W+ WWEND +RHVYF+GKDNIPFH LFWPAQLMGAGNLHLPD++PANQYVTFKGGKASASRG+GLTI   LDLFEPDALRFA+AAALPEQ+DTEIS EEIARRINEELVAT+GNLVNRVLSMVHKN +G VP TPG   DD
Sbjct:   93 DLYTTTGTDNHARITQAMFLAQLANGHIDKRTTEQYFDPEAERFLADRYIEGECPHCGYADARGDQCDNCGRTLDPIDLINPRSKLSGATPVKRSTDHFFYRYSDFTDALRHYLNDKTDWRPHVVNFAKGWLED-EGLLDRAITRDIDWGIDVPVDDLGPGKKIYVWYDAVIGYLSASQEWAASDANLSGEPDAWKDWWENDASRHVYFIGKDNIPFHALFWPAQLMGAGNLHLPDSIPANQYVTFKGGKASASRGVGLTIADALDLFEPDALRFAMAAALPEQADTEISEEEIARRINEELVATWGNLVNRVLSMVHKNCDGEVPDTPGREPDD 426
[Close]
BLAST of mRNA_M-pyrifera_M_contig78124.18363.1 vs. uniprot
Match: A0A7K2A6T1_9ACTN (Methionine--tRNA ligase n=8 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A7K2A6T1_9ACTN)

HSP 1 Score: 541 bits (1394), Expect = 4.290e-189
Identity = 247/326 (75.77%), Postives = 282/326 (86.50%), Query Frame = 1 
Query:    1 DLYTTTGTENHAKVTQEMFLAQLENGHIDKRISEQFFDPEAQRFLPDRYIEGTCPNCGYTDARGDQCDNCGKTYDATELLEPRSKISGATPELRETEHFYYRFSDFNEQIRTWLQSRKGWRPHVLNFALGWTEEGEGLQDRAITRDLDWGVELPVDDLGPGKRIYVWYDAVIGYLSASKEWAAAQGDPELWRHWWENDDARHVYFVGKDNIPFHCLFWPAQLMGAGNLHLPDNVPANQYVTFKGGKASASRGIGLTIEQGLDLFEPDALRFALAAALPEQSDTEISVEEIARRINEELVATYGNLVNRVLSMVHKNGEGAVPTPGE 978
            DLYTTTGT NHA+VTQ+MFL QL+NGHIDKR+SEQF+DP  +RFLPDRYIEGTCP CGY  ARGDQC++CG T DAT+L+EPRSKISGA PELR TEHFYYR+SDF E++  WL++R+GWRPHVLN + GWT EG  LQDRAITRDLDWGVELPVDDLG GKRIYVWYDAVIGYLSASKEWAA  GDP+ W+ WW ND++RH+YFVGKDNIPFH + WPAQLMG G+LHLPDNVPANQYVTF G K +A RG+GL I +GL LFEPDALR+ALAAALPE +DTE+S+EEIARRIN+ELVAT+GNLVNRVLS+      GAVP  G+
Sbjct:   95 DLYTTTGTRNHAEVTQDMFLVQLKNGHIDKRVSEQFYDPVGERFLPDRYIEGTCPRCGYGAARGDQCEHCGTTLDATDLIEPRSKISGAVPELRSTEHFYYRYSDFTEKVAGWLKTRRGWRPHVLNSSFGWTNEG--LQDRAITRDLDWGVELPVDDLGEGKRIYVWYDAVIGYLSASKEWAARSGDPDAWKRWWHNDESRHLYFVGKDNIPFHAMLWPAQLMGYGDLHLPDNVPANQYVTFSGAKMAAGRGVGLAIGEGLRLFEPDALRYALAAALPEHADTEVSIEEIARRINDELVATWGNLVNRVLSLAQSALGGAVPGVGD 418
[Close]
BLAST of mRNA_M-pyrifera_M_contig78124.18363.1 vs. uniprot
Match: A0A2E8L9L9_9ACTN (Methionine--tRNA ligase n=9 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A2E8L9L9_9ACTN)

HSP 1 Score: 535 bits (1379), Expect = 5.980e-187
Identity = 246/317 (77.60%), Postives = 281/317 (88.64%), Query Frame = 1 
Query:    1 DLYTTTGTENHAKVTQEMFLAQLENGHIDKRISEQFFDPEAQRFLPDRYIEGTCPNCGYTDARGDQCDNCGKTYDATELLEPRSKISGATPELRETEHFYYRFSDFNEQIRTWLQSRKGWRPHVLNFALGWTEEGEGLQDRAITRDLDWGVELPVDDLGPGKRIYVWYDAVIGYLSASKEWAAAQGDPELWRHWWENDDARHVYFVGKDNIPFHCLFWPAQLMGAG-NLHLPDNVPANQYVTFKGGKASASRGIGLTIEQGLDLFEPDALRFALAAALPEQSDTEISVEEIARRINEELVATYGNLVNRVLSMVHKN 948
            DLYTTTGT++HA+VTQEMFL QLE G IDKR S+QFFDPEA RFLPDRYIEG CP+CGY +ARGDQCD CG+T DAT+L++PRSKISGA PELR TEHFY+R+SDF E++  +L  ++GWR HVLNF   W  E EGL DRAITRDLDWGVELPVDDLGPGKRIYVWYDAVIGYLSAS+EWA  QGD E WRHWW NDD+RHVYF+GKDNIPFHCLFWPAQLMG    +HLPD+VPANQY+TFKGGKASASRG+GLTI++GLD+F+ D LR+ALAA+ PEQ+DT+IS+EEIARRINEELVAT+GNLVNRVLSMV+KN
Sbjct:   91 DLYTTTGTDHHARVTQEMFLKQLEQGFIDKRTSKQFFDPEADRFLPDRYIEGACPHCGYGEARGDQCDTCGRTLDATDLIDPRSKISGAAPELRPTEHFYFRYSDFTERVGEFLADKQGWRNHVLNFVKSWINE-EGLLDRAITRDLDWGVELPVDDLGPGKRIYVWYDAVIGYLSASQEWAQRQGDDERWRHWWHNDDSRHVYFIGKDNIPFHCLFWPAQLMGYDPEIHLPDDVPANQYITFKGGKASASRGVGLTIQEGLDIFQADGLRYALAASFPEQADTDISIEEIARRINEELVATWGNLVNRVLSMVNKN 406
[Close]
BLAST of mRNA_M-pyrifera_M_contig78124.18363.1 vs. uniprot
Match: A0A2E4W1F1_9ACTN (Methionine--tRNA ligase n=7 Tax=Actinobacteria TaxID=201174 RepID=A0A2E4W1F1_9ACTN)

HSP 1 Score: 533 bits (1372), Expect = 6.680e-186
Identity = 246/336 (73.21%), Postives = 282/336 (83.93%), Query Frame = 1 
Query:    1 DLYTTTGTENHAKVTQEMFLAQLENGHIDKRISEQFFDPEAQRFLPDRYIEGTCPNCGYTDARGDQCDNCGKTYDATELLEPRSKISGATPELRETEHFYYRFSDFNEQIRTWLQSRKGWRPHVLNFALGWTEEGEGLQDRAITRDLDWGVELPVDDLGPGKRIYVWYDAVIGYLSASKEWAAAQGDPELWRHWWENDDARHVYFVGKDNIPFHCLFWPAQLMGAGN------LHLPDNVPANQYVTFKGGKASASRGIGLTIEQGLDLFEPDALRFALAAALPEQSDTEISVEEIARRINEELVATYGNLVNRVLSMVHKNGEGAVPTPGEFTDD 990
            DLYTTTGT NH++VTQEMFLAQLE GHID+R S+Q +D E  RFLPDRY+EGTCP+C   +ARGDQCDNCGKTYDATEL+ PRSK+S +TP LRETEHFY+R+SDFN+ +  +L S++GWR HV+NFALGW  + EGL DRAITRDLDWGVELPVDDLG GKRIYVWYDAVIGYLSASKEWA  QG P+ W+HWW ND++RHVYF+GKDNIPFH LFWPAQLM  G       LHLPD++PANQYVTFKGGKASASRG+G+TIE+GL  F+ DALR+ALA+  PEQ+DTEIS EEI RR+NEELVA +GNLVNRVLSM HK   GAV  PGE T D
Sbjct:   91 DLYTTTGTSNHSEVTQEMFLAQLERGHIDRRTSKQLYDVEVNRFLPDRYVEGTCPHCDANEARGDQCDNCGKTYDATELINPRSKMSSSTPVLRETEHFYFRYSDFNDSLEIFLNSKEGWRNHVINFALGWLRD-EGLIDRAITRDLDWGVELPVDDLGEGKRIYVWYDAVIGYLSASKEWAEQQGTPDKWKHWWHNDESRHVYFIGKDNIPFHALFWPAQLMAVGEQVAGKELHLPDDIPANQYVTFKGGKASASRGVGMTIEEGLKHFQADALRYALASNFPEQADTEISYEEIVRRVNEELVANWGNLVNRVLSMTHKTCGGAVAEPGELTKD 425
[Close]
BLAST of mRNA_M-pyrifera_M_contig78124.18363.1 vs. uniprot
Match: A0A1Z9F9G3_9ACTN (Methionine--tRNA ligase n=1 Tax=Acidimicrobiaceae bacterium TMED130 TaxID=1986616 RepID=A0A1Z9F9G3_9ACTN)

HSP 1 Score: 533 bits (1372), Expect = 7.920e-186
Identity = 247/335 (73.73%), Postives = 284/335 (84.78%), Query Frame = 1 
Query:    1 DLYTTTGTENHAKVTQEMFLAQLENGHIDKRISEQFFDPEAQRFLPDRYIEGTCPNCGYTDARGDQCDNCGKTYDATELLEPRSKISGATPELRETEHFYYRFSDFNEQIRTWLQSRKGWRPHVLNFALGWTEEGEGLQDRAITRDLDWGVELPVDDLGPGKRIYVWYDAVIGYLSASKEWAAAQGDPELWRHWWENDDARHVYFVGKDNIPFHCLFWPAQLMGA-----GN-LHLPDNVPANQYVTFKGGKASASRGIGLTIEQGLDLFEPDALRFALAAALPEQSDTEISVEEIARRINEELVATYGNLVNRVLSMVHKNGEGAVPTPGEFTD 987
            DLYTTTGTE+HA VTQEMFLAQL+NGHID+R S Q +DP A RFLPDRY+EG CP CGY +ARGDQCDNCGKTYDA EL+ PRSK+S ATPE RETEHFY+R+SDFN+ +  +L+++ GWR HVLNFA GW +E EGL DRAITRDLDWGV LPVDDLG GKRIYVWYDAVIGYLSAS+EWA+  G+PE W+HWW N  +RHVYF+GKDNIPFH LFWPAQLMG      GN LHLPD+VPANQYVTFKGGKASASRG+GLTI +GL+ ++PDALR+ALAA  PEQ+DTEIS +EI RRINEELVA +GNLVNRVLSM +KN +  +P PGE T+
Sbjct:   91 DLYTTTGTEHHANVTQEMFLAQLDNGHIDRRTSTQLYDPLAHRFLPDRYVEGVCPLCGYEEARGDQCDNCGKTYDAVELINPRSKLSDATPEPRETEHFYFRYSDFNDDLANFLENKTGWRNHVLNFAKGWVQE-EGLIDRAITRDLDWGVRLPVDDLGEGKRIYVWYDAVIGYLSASQEWASNNGEPEKWKHWWHNQASRHVYFIGKDNIPFHALFWPAQLMGVKDAIGGNDLHLPDDVPANQYVTFKGGKASASRGVGLTISEGLEKYQPDALRYALAANFPEQADTEISDQEITRRINEELVANWGNLVNRVLSMTYKNSDQMIPAPGELTE 424
[Close]
BLAST of mRNA_M-pyrifera_M_contig78124.18363.1 vs. uniprot
Match: A0A7V0NNW9_9ACTN (Methionine--tRNA ligase n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A7V0NNW9_9ACTN)

HSP 1 Score: 531 bits (1368), Expect = 1.410e-185
Identity = 244/325 (75.08%), Postives = 278/325 (85.54%), Query Frame = 1 
Query:    1 DLYTTTGTENHAKVTQEMFLAQLENGHIDKRISEQFFDPEAQRFLPDRYIEGTCPNCGYTDARGDQCDNCGKTYDATELLEPRSKISGATPELRETEHFYYRFSDFNEQIRTWLQSRKGWRPHVLNFALGWTEEGEGLQDRAITRDLDWGVELPVDDLGPGKRIYVWYDAVIGYLSASKEWAAAQGDPELWRHWWENDDARHVYFVGKDNIPFHCLFWPAQLMGAGNLHLPDNVPANQYVTFKGGKASASRGIGLTIEQGLDLFEPDALRFALAAALPEQSDTEISVEEIARRINEELVATYGNLVNRVLSMVHKNGEGAVPTPG 975
            DL+TTTGT+NH  VTQ++F    E GHIDKR SEQF+DPEAQRFLPDRY+EGTCP+CGY +ARGDQCDNCG+T D T+L+EPRSK+SGATPELR TEHFY R +DF  Q+  WL+ RKGWR HVLNF+LGW EEG  L DR ITRD+DWGV++PV+ LGPGK+IYVW+DAVIGYLSA+KEWAAA+G PE WR WWEN DA H YF+GKDN+PFH + WPA LMG G L LP NVPANQYVTFKGGKAS+SRGIGLTI + L L+EPDALR+A+AA LPEQSDTEIS EEIARRINEELVAT+GNLVNRVLSM  KN +GAVPTPG
Sbjct:   74 DLFTTTGTDNHHAVTQDVFSRLYEKGHIDKRSSEQFYDPEAQRFLPDRYVEGTCPHCGYKEARGDQCDNCGRTLDPTDLIEPRSKLSGATPELRTTEHFYLRLTDFEGQLEEWLRGRKGWRKHVLNFSLGWIEEG--LLDRPITRDIDWGVDIPVEGLGPGKKIYVWFDAVIGYLSAAKEWAAARGTPEAWRDWWENPDAEHYYFIGKDNVPFHVIIWPAMLMGYGGLELPTNVPANQYVTFKGGKASSSRGIGLTISEALALYEPDALRYAVAANLPEQSDTEISEEEIARRINEELVATWGNLVNRVLSMTSKNFDGAVPTPG 396
[Close]
BLAST of mRNA_M-pyrifera_M_contig78124.18363.1 vs. uniprot
Match: A0A2E3J9Y6_9ACTN (Methionine--tRNA ligase n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A2E3J9Y6_9ACTN)

HSP 1 Score: 532 bits (1370), Expect = 1.590e-185
Identity = 244/336 (72.62%), Postives = 286/336 (85.12%), Query Frame = 1 
Query:    1 DLYTTTGTENHAKVTQEMFLAQLENGHIDKRISEQFFDPEAQRFLPDRYIEGTCPNCGYTDARGDQCDNCGKTYDATELLEPRSKISGATPELRETEHFYYRFSDFNEQIRTWLQSRKGWRPHVLNFALGWTEEGEGLQDRAITRDLDWGVELPVDDLGPGKRIYVWYDAVIGYLSASKEWAAAQGDPELWRHWWENDDARHVYFVGKDNIPFHCLFWPAQLM------GAGNLHLPDNVPANQYVTFKGGKASASRGIGLTIEQGLDLFEPDALRFALAAALPEQSDTEISVEEIARRINEELVATYGNLVNRVLSMVHKNGEGAVPTPGEFTDD 990
            DLYTTTGT NHA+VTQEMFLAQL+NG ID+R + Q FDPE +RFLPDRY+EG+CP+CGY++ARGDQCD CGKTYDAT+L+EPRSK+S ATPE RETEHFY+R+SDFN Q+  +L  ++GWR HVLNFA GW  + EGL DRAITRDLDWGVELPV+DLG GKRIYVWYDAVIGYLSAS+EWA+   D E WRHWW ND+ARHVYF+GKDNIPFH LFWPAQLM      G   LHLPD++PANQYVTFKGGKASASRG+GLTI +GL+ ++PDALR+ALAA  PEQ+DTEIS EEI RRIN+ELV+ +GNLVNRVLSM HKN +  +P+P E T++
Sbjct:   91 DLYTTTGTPNHAEVTQEMFLAQLQNGFIDRRTTNQLFDPEVKRFLPDRYVEGSCPHCGYSEARGDQCDQCGKTYDATDLIEPRSKLSEATPEARETEHFYFRYSDFNNQLDEFLNQKEGWRNHVLNFAKGWLTD-EGLLDRAITRDLDWGVELPVEDLGEGKRIYVWYDAVIGYLSASQEWASTTDDKEKWRHWWHNDNARHVYFIGKDNIPFHALFWPAQLMATKQAIGGETLHLPDDIPANQYVTFKGGKASASRGVGLTIAEGLEKYQPDALRYALAANFPEQADTEISEEEIVRRINDELVSNWGNLVNRVLSMAHKNCDQMIPSPDEITEE 425
[Close]
BLAST of mRNA_M-pyrifera_M_contig78124.18363.1 vs. uniprot
Match: A0A0C1UAB3_9ACTN (Methionine--tRNA ligase n=3 Tax=Actinobacteria TaxID=201174 RepID=A0A0C1UAB3_9ACTN)

HSP 1 Score: 531 bits (1369), Expect = 2.260e-185
Identity = 244/334 (73.05%), Postives = 287/334 (85.93%), Query Frame = 1 
Query:    1 DLYTTTGTENHAKVTQEMFLAQLENGHIDKRISEQFFDPEAQRFLPDRYIEGTCPNCGYTDARGDQCDNCGKTYDATELLEPRSKISGATPELRETEHFYYRFSDFNEQIRTWLQSRKGWRPHVLNFALGWTEEGEGLQDRAITRDLDWGVELPVDDLGPGKRIYVWYDAVIGYLSASKEWAAAQGDPELWRHWWENDDARHVYFVGKDNIPFHCLFWPAQLM------GAGNLHLPDNVPANQYVTFKGGKASASRGIGLTIEQGLDLFEPDALRFALAAALPEQSDTEISVEEIARRINEELVATYGNLVNRVLSMVHKNGEGAVPTPGEFT 984
            DLYTTTGT+NHA+VTQ+MFL+QLENGHID+R + Q FDP+A+RFLPDRY+EGTCP+CGY +ARGDQCD CGKTYDATEL+ PRSK+S ATPE ++TEHFY+R+SDFNE++  +L++++GWR HVLNFA GW  + EGL DRAITRDLDWGVELPV DLG GKRIYVWYDAVIGYLSAS+EWA+   D E WRHWW NDDARHVYF+GKDNIPFH LFWPAQL+      G  NLHLPD++PANQYVTFKGGKASASRG+GLTI +GL+ ++PDALR+ALAA  PEQ+DTEIS EEI RRIN+ELV+ +GNLVNRVLSM +KN   A+P  GE T
Sbjct:   91 DLYTTTGTQNHAQVTQDMFLSQLENGHIDRRTTNQLFDPKAERFLPDRYVEGTCPHCGYEEARGDQCDECGKTYDATELISPRSKLSDATPEPKKTEHFYFRYSDFNEELVQFLEAKQGWRNHVLNFAKGWLTD-EGLIDRAITRDLDWGVELPVSDLGEGKRIYVWYDAVIGYLSASQEWASKTEDKEKWRHWWHNDDARHVYFIGKDNIPFHALFWPAQLIATKDAIGGENLHLPDDIPANQYVTFKGGKASASRGVGLTIAEGLEKYQPDALRYALAANFPEQADTEISEEEIIRRINDELVSNWGNLVNRVLSMAYKNSNKAIPDHGELT 423
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig78124.18363.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7Y2IGE8_9ACTN1.770e-19878.21Methionine--tRNA ligase n=1 Tax=Acidimicrobiales b... [more]
A0A6B1B1C2_9ACTN1.840e-19276.06Methionine--tRNA ligase n=1 Tax=Acidimicrobiaceae ... [more]
A0A7Y2GSW1_9ACTN2.120e-19275.52Methionine--tRNA ligase n=1 Tax=Acidimicrobiales b... [more]
A0A7K2A6T1_9ACTN4.290e-18975.77Methionine--tRNA ligase n=8 Tax=Acidimicrobiaceae ... [more]
A0A2E8L9L9_9ACTN5.980e-18777.60Methionine--tRNA ligase n=9 Tax=Acidimicrobiaceae ... [more]
A0A2E4W1F1_9ACTN6.680e-18673.21Methionine--tRNA ligase n=7 Tax=Actinobacteria Tax... [more]
A0A1Z9F9G3_9ACTN7.920e-18673.73Methionine--tRNA ligase n=1 Tax=Acidimicrobiaceae ... [more]
A0A7V0NNW9_9ACTN1.410e-18575.08Methionine--tRNA ligase n=1 Tax=Actinomycetia bact... [more]
A0A2E3J9Y6_9ACTN1.590e-18572.62Methionine--tRNA ligase n=1 Tax=Acidimicrobiaceae ... [more]
A0A0C1UAB3_9ACTN2.260e-18573.05Methionine--tRNA ligase n=3 Tax=Actinobacteria Tax... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig78124contigM-pyrifera_M_contig78124:3..992 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score438.0
Seed ortholog evalue4e-120
Seed eggNOG ortholog298653.Franean1_5898
Preferred namemetG
KEGG rclassRC00055,RC00523
KEGG koko:K01874
KEGG ReactionR03659,R04773
KEGG Pathwayko00450,ko00970,map00450,map00970
KEGG ModuleM00359,M00360
Hectar predicted targeting categoryother localisation
GOsGO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:1901360,GO:1901564,GO:1901566,GO:1901576
EggNOG free text desc.Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
EggNOG OGs2GK4S@201174,4ES23@85013,COG0143@1,COG0143@2
EC6.1.1.10
COG Functional cat.J
Best tax levelFrankiales
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01007,ko03016
Exons1
Model size990
Cds size990
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816682.4216185-CDS-M-pyrifera_M_contig78124:2..9921622816682.4216185-CDS-M-pyrifera_M_contig78124:2..992Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig78124 3..992 -
1692278116.9868855-CDS-M-pyrifera_M_contig78124:2..9921692278116.9868855-CDS-M-pyrifera_M_contig78124:2..992Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig78124 3..992 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig78124.18363.1prot_M-pyrifera_M_contig78124.18363.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig78124 3..992 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig78124.18363.1

>prot_M-pyrifera_M_contig78124.18363.1 ID=prot_M-pyrifera_M_contig78124.18363.1|Name=mRNA_M-pyrifera_M_contig78124.18363.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=330bp
DLYTTTGTENHAKVTQEMFLAQLENGHIDKRISEQFFDPEAQRFLPDRYI
EGTCPNCGYTDARGDQCDNCGKTYDATELLEPRSKISGATPELRETEHFY
YRFSDFNEQIRTWLQSRKGWRPHVLNFALGWTEEGEGLQDRAITRDLDWG
VELPVDDLGPGKRIYVWYDAVIGYLSASKEWAAAQGDPELWRHWWENDDA
RHVYFVGKDNIPFHCLFWPAQLMGAGNLHLPDNVPANQYVTFKGGKASAS
RGIGLTIEQGLDLFEPDALRFALAAALPEQSDTEISVEEIARRINEELVA
TYGNLVNRVLSMVHKNGEGAVPTPGEFTDD
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mRNA from alignment at M-pyrifera_M_contig78124:3..992-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig78124.18363.1 ID=mRNA_M-pyrifera_M_contig78124.18363.1|Name=mRNA_M-pyrifera_M_contig78124.18363.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=990bp|location=Sequence derived from alignment at M-pyrifera_M_contig78124:3..992- (Macrocystis pyrifera P11B4 male)
GATCTCTACACCACCACCGGCACCGAGAACCATGCCAAGGTCACCCAGGA
GATGTTCCTGGCCCAGCTCGAGAACGGCCACATCGACAAGCGCATCTCCG
AGCAGTTCTTCGATCCCGAGGCCCAGCGCTTCCTGCCCGACCGCTACATC
GAGGGCACGTGTCCGAACTGTGGCTACACCGACGCCCGAGGCGACCAGTG
CGACAATTGTGGCAAGACCTACGACGCCACCGAGCTGCTCGAACCTCGCT
CGAAGATCTCCGGAGCCACGCCCGAACTGCGTGAGACCGAGCACTTCTAC
TACCGGTTCTCCGACTTCAACGAGCAGATCCGAACCTGGCTGCAGAGCCG
GAAGGGCTGGCGACCCCACGTCTTGAACTTCGCCCTCGGGTGGACCGAAG
AAGGCGAGGGCCTCCAAGACCGAGCAATCACCCGAGACCTCGACTGGGGT
GTCGAACTCCCCGTCGACGACCTCGGCCCGGGCAAGCGCATCTACGTCTG
GTACGACGCCGTCATCGGCTACCTTTCGGCTTCCAAGGAGTGGGCGGCGG
CTCAGGGTGATCCCGAGCTGTGGCGCCATTGGTGGGAGAACGACGACGCC
AGGCACGTCTATTTCGTCGGCAAGGACAACATCCCGTTCCACTGCCTGTT
CTGGCCGGCACAGCTGATGGGCGCCGGCAATCTCCACCTCCCCGACAACG
TGCCGGCGAATCAGTACGTCACCTTCAAGGGTGGCAAGGCCTCGGCGAGC
CGGGGTATCGGCCTCACGATCGAGCAGGGGCTCGACCTCTTCGAGCCAGA
TGCCCTGCGCTTTGCGCTGGCGGCGGCGCTGCCCGAGCAGTCCGACACCG
AGATCTCGGTCGAAGAGATCGCTCGGCGCATCAACGAAGAGCTCGTCGCC
ACCTACGGCAACCTGGTGAACCGGGTGCTGTCGATGGTCCACAAGAACGG
TGAGGGTGCGGTTCCGACTCCGGGTGAGTTCACCGATGAC
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig78124:3..992-

>mRNA_M-pyrifera_M_contig78124.18363.1 ID=mRNA_M-pyrifera_M_contig78124.18363.1|Name=mRNA_M-pyrifera_M_contig78124.18363.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1980bp|location=Sequence derived from alignment at M-pyrifera_M_contig78124:3..992- (Macrocystis pyrifera P11B4 male)
GATCTCTACACCACCACCGGCACCGAGAACCATGCCAAGGTCACCCAGGA
GATGTTCCTGGCCCAGCTCGAGAACGGCCACATCGACAAGCGCATCTCCG
AGCAGTTCTTCGATCCCGAGGCCCAGCGCTTCCTGCCCGACCGCTACATC
GAGGGCACGTGTCCGAACTGTGGCTACACCGACGCCCGAGGCGACCAGTG
CGACAATTGTGGCAAGACCTACGACGCCACCGAGCTGCTCGAACCTCGCT
CGAAGATCTCCGGAGCCACGCCCGAACTGCGTGAGACCGAGCACTTCTAC
TACCGGTTCTCCGACTTCAACGAGCAGATCCGAACCTGGCTGCAGAGCCG
GAAGGGCTGGCGACCCCACGTCTTGAACTTCGCCCTCGGGTGGACCGAAG
AAGGCGAGGGCCTCCAAGACCGAGCAATCACCCGAGACCTCGACTGGGGT
GTCGAACTCCCCGTCGACGACCTCGGCCCGGGCAAGCGCATCTACGTCTG
GTACGACGCCGTCATCGGCTACCTTTCGGCTTCCAAGGAGTGGGCGGCGG
CTCAGGGTGATCCCGAGCTGTGGCGCCATTGGTGGGAGAACGACGACGCC
AGGCACGTCTATTTCGTCGGCAAGGACAACATCCCGTTCCACTGCCTGTT
CTGGCCGGCACAGCTGATGGGCGCCGGCAATCTCCACCTCCCCGACAACG
TGCCGGCGAATCAGTACGTCACCTTCAAGGGTGGCAAGGCCTCGGCGAGC
CGGGGTATCGGCCTCACGATCGAGCAGGGGCTCGACCTCTTCGAGCCAGA
TGCCCTGCGCTTTGCGCTGGCGGCGGCGCTGCCCGAGCAGTCCGACACCG
AGATCTCGGTCGAAGAGATCGCTCGGCGCATCAACGAAGAGCTCGTCGCC
ACCTACGGCAACCTGGTGAACCGGGTGCTGTCGATGGTCCACAAGAACGG
TGAGGGTGCGGTTCCGACTCCGGGTGAGTTCACCGATGACGATCTCTACA
CCACCACCGGCACCGAGAACCATGCCAAGGTCACCCAGGAGATGTTCCTG
GCCCAGCTCGAGAACGGCCACATCGACAAGCGCATCTCCGAGCAGTTCTT
CGATCCCGAGGCCCAGCGCTTCCTGCCCGACCGCTACATCGAGGGCACGT
GTCCGAACTGTGGCTACACCGACGCCCGAGGCGACCAGTGCGACAATTGT
GGCAAGACCTACGACGCCACCGAGCTGCTCGAACCTCGCTCGAAGATCTC
CGGAGCCACGCCCGAACTGCGTGAGACCGAGCACTTCTACTACCGGTTCT
CCGACTTCAACGAGCAGATCCGAACCTGGCTGCAGAGCCGGAAGGGCTGG
CGACCCCACGTCTTGAACTTCGCCCTCGGGTGGACCGAAGAAGGCGAGGG
CCTCCAAGACCGAGCAATCACCCGAGACCTCGACTGGGGTGTCGAACTCC
CCGTCGACGACCTCGGCCCGGGCAAGCGCATCTACGTCTGGTACGACGCC
GTCATCGGCTACCTTTCGGCTTCCAAGGAGTGGGCGGCGGCTCAGGGTGA
TCCCGAGCTGTGGCGCCATTGGTGGGAGAACGACGACGCCAGGCACGTCT
ATTTCGTCGGCAAGGACAACATCCCGTTCCACTGCCTGTTCTGGCCGGCA
CAGCTGATGGGCGCCGGCAATCTCCACCTCCCCGACAACGTGCCGGCGAA
TCAGTACGTCACCTTCAAGGGTGGCAAGGCCTCGGCGAGCCGGGGTATCG
GCCTCACGATCGAGCAGGGGCTCGACCTCTTCGAGCCAGATGCCCTGCGC
TTTGCGCTGGCGGCGGCGCTGCCCGAGCAGTCCGACACCGAGATCTCGGT
CGAAGAGATCGCTCGGCGCATCAACGAAGAGCTCGTCGCCACCTACGGCA
ACCTGGTGAACCGGGTGCTGTCGATGGTCCACAAGAACGGTGAGGGTGCG
GTTCCGACTCCGGGTGAGTTCACCGATGAC
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