mRNA_M-pyrifera_M_contig7808.18357.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig7808.18357.1
Unique NamemRNA_M-pyrifera_M_contig7808.18357.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
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BLAST of mRNA_M-pyrifera_M_contig7808.18357.1 vs. uniprot
Match: A0A6H5KRR0_9PHAE (PlsC domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KRR0_9PHAE)

HSP 1 Score: 116 bits (291), Expect = 2.130e-29
Identity = 46/56 (82.14%), Postives = 52/56 (92.86%), Query Frame = 1 
Query:    1 KVDCDWWFVFEIMRRLGRHGALKIILKDDQKHVPVLGWGMRGFGFIFLRRDWAKDR 168
            +VDCDWWF+FE+MR L RHGALKIILKDDQKH+PV GWGMRGFGF+FL+RDW KDR
Sbjct:  118 QVDCDWWFLFELMRPLRRHGALKIILKDDQKHIPVTGWGMRGFGFVFLKRDWVKDR 173
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BLAST of mRNA_M-pyrifera_M_contig7808.18357.1 vs. uniprot
Match: A0A0L0G5H1_9EUKA (PlsC domain-containing protein n=1 Tax=Sphaeroforma arctica JP610 TaxID=667725 RepID=A0A0L0G5H1_9EUKA)

HSP 1 Score: 79.0 bits (193), Expect = 1.110e-15
Identity = 32/56 (57.14%), Postives = 42/56 (75.00%), Query Frame = 1 
Query:    4 VDCDWWFVFEIMRRLGRHGALKIILKDDQKHVPVLGWGMRGFGFIFLRRDWAKDRY 171
            VD DW+ ++ + R  G HG +KIILKD  KH+PV GWGM+ F FIFL RDW+KD++
Sbjct:  107 VDYDWYCLWLLGRARGYHGVMKIILKDSLKHLPVFGWGMQYFEFIFLARDWSKDKH 162
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BLAST of mRNA_M-pyrifera_M_contig7808.18357.1 vs. uniprot
Match: A0A067D0D2_SAPPC (PlsC domain-containing protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067D0D2_SAPPC)

HSP 1 Score: 72.0 bits (175), Expect = 3.240e-13
Identity = 29/66 (43.94%), Postives = 44/66 (66.67%), Query Frame = 1 
Query:    1 KVDCDWWFVFEIMRRLGRHGALKIILKDDQKHVPVLGWGMRGFGFIFLRRDWAKDRYAYDAYFFNF 198
            +VD DWW+++++ R  G  G +KI LK + KHVP++GWGM+ F F+FL+R+   DR     Y  +F
Sbjct:   86 QVDADWWYLWQMARLQGAAGNVKITLKGELKHVPIIGWGMQFFEFLFLKRNIEHDRLHVQEYMQSF 151
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BLAST of mRNA_M-pyrifera_M_contig7808.18357.1 vs. uniprot
Match: A0A507EGD5_9FUNG (PlsC domain-containing protein n=1 Tax=Powellomyces hirtus TaxID=109895 RepID=A0A507EGD5_9FUNG)

HSP 1 Score: 71.2 bits (173), Expect = 5.820e-13
Identity = 28/56 (50.00%), Postives = 39/56 (69.64%), Query Frame = 1 
Query:    1 KVDCDWWFVFEIMRRLGRHGALKIILKDDQKHVPVLGWGMRGFGFIFLRRDWAKDR 168
            ++  DWW+++ +    G HG++KIILK   K++PV GWGM+ F FIFL R WA DR
Sbjct:   95 QIYSDWWWLWILAWHKGAHGSMKIILKQSLKYLPVFGWGMQFFEFIFLARKWAVDR 150
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BLAST of mRNA_M-pyrifera_M_contig7808.18357.1 vs. uniprot
Match: A0A024G5U4_9STRA (PlsC domain-containing protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024G5U4_9STRA)

HSP 1 Score: 70.9 bits (172), Expect = 5.910e-13
Identity = 27/55 (49.09%), Postives = 39/55 (70.91%), Query Frame = 1 
Query:    1 KVDCDWWFVFEIMRRLGRHGALKIILKDDQKHVPVLGWGMRGFGFIFLRRDWAKD 165
            ++D DWWF+F++ R     G +KI+LK+  K+VP++GWGMR F F+FLRR    D
Sbjct:   21 QIDSDWWFLFQMARSAQAAGNIKIVLKEQLKYVPIVGWGMRWFEFLFLRRRLDHD 75
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BLAST of mRNA_M-pyrifera_M_contig7808.18357.1 vs. uniprot
Match: A0A165UE37_9APHY (PlsC domain-containing protein n=1 Tax=Daedalea quercina L-15889 TaxID=1314783 RepID=A0A165UE37_9APHY)

HSP 1 Score: 70.9 bits (172), Expect = 8.200e-13
Identity = 26/57 (45.61%), Postives = 39/57 (68.42%), Query Frame = 1 
Query:    1 KVDCDWWFVFEIMRRLGRHGALKIILKDDQKHVPVLGWGMRGFGFIFLRRDWAKDRY 171
            +V  DWW+ + +   +G +  + I+LK+  K +P+LGWGMR F FIFL+R WA DR+
Sbjct:   97 QVYADWWYAWSLTYYMGTYADVFIVLKESLKWLPILGWGMRFFNFIFLKRSWASDRF 153
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BLAST of mRNA_M-pyrifera_M_contig7808.18357.1 vs. uniprot
Match: K3X6I6_GLOUD (PlsC domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X6I6_GLOUD)

HSP 1 Score: 70.9 bits (172), Expect = 8.380e-13
Identity = 29/62 (46.77%), Postives = 40/62 (64.52%), Query Frame = 1 
Query:    1 KVDCDWWFVFEIMRRLGRHGALKIILKDDQKHVPVLGWGMRGFGFIFLRRDWAKDRYAYDAY 186
            +VD DWW++++  R     G +KI+LKD  K+VP++GWGMR F F+FLRR    D     AY
Sbjct:   86 QVDADWWYIWQAARAYKGAGNIKIVLKDQLKYVPIIGWGMRLFEFLFLRRSIDHDSKHIKAY 147
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BLAST of mRNA_M-pyrifera_M_contig7808.18357.1 vs. uniprot
Match: F0WLM4_9STRA (1acylsnglycerol3phosphate acyltransferase putative n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WLM4_9STRA)

HSP 1 Score: 70.9 bits (172), Expect = 8.400e-13
Identity = 27/55 (49.09%), Postives = 39/55 (70.91%), Query Frame = 1 
Query:    1 KVDCDWWFVFEIMRRLGRHGALKIILKDDQKHVPVLGWGMRGFGFIFLRRDWAKD 165
            ++D DWWF+F++ R     G +KI+LK+  K+VP++GWGMR F F+FLRR    D
Sbjct:  101 QIDSDWWFLFQMARSAKAAGNIKIVLKEQLKYVPIVGWGMRWFEFLFLRRRLDHD 155
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BLAST of mRNA_M-pyrifera_M_contig7808.18357.1 vs. uniprot
Match: A0A1Y1Z5J0_9FUNG (Acyltransferase-domain-containing protein n=1 Tax=Basidiobolus meristosporus CBS 931.73 TaxID=1314790 RepID=A0A1Y1Z5J0_9FUNG)

HSP 1 Score: 70.5 bits (171), Expect = 1.060e-12
Identity = 28/56 (50.00%), Postives = 39/56 (69.64%), Query Frame = 1 
Query:    1 KVDCDWWFVFEIMRRLGRHGALKIILKDDQKHVPVLGWGMRGFGFIFLRRDWAKDR 168
            ++  DW +++ I      HGA+KIILKD  KH+P+ GWGM+ F FIFL+R WA D+
Sbjct:  108 QIYADWIYLWCIAYFAKAHGAIKIILKDTLKHIPIFGWGMQFFDFIFLKRSWATDQ 163
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BLAST of mRNA_M-pyrifera_M_contig7808.18357.1 vs. uniprot
Match: A0A0L0HEE0_SPIPD (PlsC domain-containing protein n=2 Tax=Spizellomyces TaxID=4815 RepID=A0A0L0HEE0_SPIPD)

HSP 1 Score: 70.1 bits (170), Expect = 1.510e-12
Identity = 28/56 (50.00%), Postives = 39/56 (69.64%), Query Frame = 1 
Query:    1 KVDCDWWFVFEIMRRLGRHGALKIILKDDQKHVPVLGWGMRGFGFIFLRRDWAKDR 168
            ++  DWW+++ +  +   HG+LKIILK+  K +PV GWGM+ F FIFL R WA DR
Sbjct:   95 QIYSDWWWLWILAWKRNAHGSLKIILKESLKFLPVFGWGMQFFEFIFLARKWALDR 150
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig7808.18357.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KRR0_9PHAE2.130e-2982.14PlsC domain-containing protein n=2 Tax=Ectocarpus ... [more]
A0A0L0G5H1_9EUKA1.110e-1557.14PlsC domain-containing protein n=1 Tax=Sphaeroform... [more]
A0A067D0D2_SAPPC3.240e-1343.94PlsC domain-containing protein n=2 Tax=Saprolegnia... [more]
A0A507EGD5_9FUNG5.820e-1350.00PlsC domain-containing protein n=1 Tax=Powellomyce... [more]
A0A024G5U4_9STRA5.910e-1349.09PlsC domain-containing protein n=1 Tax=Albugo cand... [more]
A0A165UE37_9APHY8.200e-1345.61PlsC domain-containing protein n=1 Tax=Daedalea qu... [more]
K3X6I6_GLOUD8.380e-1346.77PlsC domain-containing protein n=1 Tax=Globisporan... [more]
F0WLM4_9STRA8.400e-1349.091acylsnglycerol3phosphate acyltransferase putative... [more]
A0A1Y1Z5J0_9FUNG1.060e-1250.00Acyltransferase-domain-containing protein n=1 Tax=... [more]
A0A0L0HEE0_SPIPD1.510e-1250.00PlsC domain-containing protein n=2 Tax=Spizellomyc... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig7808contigM-pyrifera_M_contig7808:11879..12076 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score115.5
Seed ortholog evalue9.2e-24
Seed eggNOG ortholog2880.D7G4B3
Preferred nameLPGAT1
KEGG rclassRC00004,RC00037
KEGG koko:K13514,ko:K15176
KEGG ReactionR09036
KEGG Pathwayko00564,map00564
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0003841,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005783,GO:0005789,GO:0005811,GO:0006629,GO:0006644,GO:0006650,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008374,GO:0008610,GO:0008654,GO:0009058,GO:0009889,GO:0009891,GO:0009893,GO:0009987,GO:0010565,GO:0012505,GO:0016020,GO:0016021,GO:0016411,GO:0016740,GO:0016746,GO:0016747,GO:0019216,GO:0019217,GO:0019222,GO:0019637,GO:0031224,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031984,GO:0036148,GO:0036149,GO:0042171,GO:0042175,GO:0042304,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044422,GO:0044424,GO:0044425,GO:0044432,GO:0044444,GO:0044446,GO:0044464,GO:0045723,GO:0045834,GO:0045923,GO:0046471,GO:0046486,GO:0046488,GO:0046889,GO:0046890,GO:0047144,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0062012,GO:0062013,GO:0065007,GO:0071617,GO:0071704,GO:0080090,GO:0090407,GO:0098827,GO:1901576
EggNOG free text desc.1-acylglycerol-3-phosphate O-acyltransferase activity
EggNOG OGsCOG0204@1,KOG1505@2759
Ec32 ortholog descriptionacyltransferase
Ec32 orthologEc-02_002040.1
COG Functional cat.I
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko01004,ko03021
Exons1
Model size198
Cds size198
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816682.1422124-CDS-M-pyrifera_M_contig7808:11878..120761622816682.1422124-CDS-M-pyrifera_M_contig7808:11878..12076Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7808 11879..12076 -
1692278116.8517945-CDS-M-pyrifera_M_contig7808:11878..120761692278116.8517945-CDS-M-pyrifera_M_contig7808:11878..12076Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7808 11879..12076 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig7808.18357.1prot_M-pyrifera_M_contig7808.18357.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig7808 11879..12076 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig7808.18357.1

>prot_M-pyrifera_M_contig7808.18357.1 ID=prot_M-pyrifera_M_contig7808.18357.1|Name=mRNA_M-pyrifera_M_contig7808.18357.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=66bp
KVDCDWWFVFEIMRRLGRHGALKIILKDDQKHVPVLGWGMRGFGFIFLRR
DWAKDRYAYDAYFFNF
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mRNA from alignment at M-pyrifera_M_contig7808:11879..12076-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig7808.18357.1 ID=mRNA_M-pyrifera_M_contig7808.18357.1|Name=mRNA_M-pyrifera_M_contig7808.18357.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=198bp|location=Sequence derived from alignment at M-pyrifera_M_contig7808:11879..12076- (Macrocystis pyrifera P11B4 male)
AAGGTGGACTGCGACTGGTGGTTTGTCTTCGAGATCATGCGGCGCCTCGG
TCGCCACGGAGCCCTGAAGATCATCCTGAAGGACGACCAGAAGCACGTGC
CCGTGCTCGGCTGGGGCATGAGGGGCTTCGGCTTCATCTTCCTGCGAAGG
GACTGGGCCAAAGATAGGTATGCGTACGATGCGTATTTTTTTAATTTC
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig7808:11879..12076-

>mRNA_M-pyrifera_M_contig7808.18357.1 ID=mRNA_M-pyrifera_M_contig7808.18357.1|Name=mRNA_M-pyrifera_M_contig7808.18357.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=396bp|location=Sequence derived from alignment at M-pyrifera_M_contig7808:11879..12076- (Macrocystis pyrifera P11B4 male)
AAGGTGGACTGCGACTGGTGGTTTGTCTTCGAGATCATGCGGCGCCTCGG
TCGCCACGGAGCCCTGAAGATCATCCTGAAGGACGACCAGAAGCACGTGC
CCGTGCTCGGCTGGGGCATGAGGGGCTTCGGCTTCATCTTCCTGCGAAGG
GACTGGGCCAAAGATAGGTATGCGTACGATGCGTATTTTTTTAATTTCAA
GGTGGACTGCGACTGGTGGTTTGTCTTCGAGATCATGCGGCGCCTCGGTC
GCCACGGAGCCCTGAAGATCATCCTGAAGGACGACCAGAAGCACGTGCCC
GTGCTCGGCTGGGGCATGAGGGGCTTCGGCTTCATCTTCCTGCGAAGGGA
CTGGGCCAAAGATAGGTATGCGTACGATGCGTATTTTTTTAATTTC
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