mRNA_M-pyrifera_M_contig78075.18355.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig78075.18355.1
Unique NamemRNA_M-pyrifera_M_contig78075.18355.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
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BLAST of mRNA_M-pyrifera_M_contig78075.18355.1 vs. uniprot
Match: I7MI13_TETTS (Tyrosine kinase domain protein n=1 Tax=Tetrahymena thermophila (strain SB210) TaxID=312017 RepID=I7MI13_TETTS)

HSP 1 Score: 97.1 bits (240), Expect = 7.120e-21
Identity = 55/128 (42.97%), Postives = 78/128 (60.94%), Query Frame = 1 
Query:   13 ADIEVLEFIAEGTYGRVDYGKWRELNIALKTLKVEQLSGRAEEEFLHECEVMMGLRAQWIVGLYGVTLSPP--SMVMEYLPGGSLDGLLQS-TMELPWELRHRLALDIVRGLSYLHSQTPLILHRDLK 387
            +D+E+   I EG YG +   KWRE+ +A+K  K++  + +   EF++EC  M  LR   IV   G     P  S+VMEY   GSL  LLQ+ ++ L WE R ++ALDI +G+ +LHS  P I+HRDLK
Sbjct:  661 SDLEIQNKITEGGYGIIYKAKWREIVVAVKKFKIDYNNQQQIVEFVNECNAMEALRHPNIVLFLGACTEIPNFSIVMEYCQRGSLWSLLQNQSVPLTWEDRRKIALDIAKGVFFLHSSKPPIIHRDLK 788
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BLAST of mRNA_M-pyrifera_M_contig78075.18355.1 vs. uniprot
Match: I7MLK9_TETTS (Tyrosine kinase domain protein n=1 Tax=Tetrahymena thermophila (strain SB210) TaxID=312017 RepID=I7MLK9_TETTS)

HSP 1 Score: 97.1 bits (240), Expect = 7.180e-21
Identity = 57/130 (43.85%), Postives = 72/130 (55.38%), Query Frame = 1 
Query:    4 IDPADIEVLEFIAEGTYGRVDYGKWRELNIALKTLKVEQLSGRAEEEFLHECEVMMGLRAQWIVGLYGVTLSPPS--MVMEYLPGGSLDGLLQSTMELPWELRHRLALDIVRGLSYLHSQTPLILHRDLK 387
            ID  ++     I+EG YG +   KWRE  +A+K  K+         +FL EC  M  LR   IV   G     P+  +++EY   GSL GLLQS + L WE R R+ALD  RG+ YLHS  P ILHRDLK
Sbjct:  764 IDFNELTTETKISEGGYGIIYKAKWRETTVAVKKFKMVH-DENTVRDFLSECHAMEALRHPNIVMFLGACTKSPNFCIILEYCQKGSLWGLLQSDVRLSWEDRRRIALDAARGVHYLHSSNPPILHRDLK 892
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BLAST of mRNA_M-pyrifera_M_contig78075.18355.1 vs. uniprot
Match: A0CFH2_PARTE (Protein kinase domain-containing protein n=1 Tax=Paramecium tetraurelia TaxID=5888 RepID=A0CFH2_PARTE)

HSP 1 Score: 96.7 bits (239), Expect = 9.620e-21
Identity = 56/131 (42.75%), Postives = 77/131 (58.78%), Query Frame = 1 
Query:    4 IDPADIEVLEFIAEGTYGRVDYGKWRELNIALKTLKVEQLSGRAEEEFLHECEVMMGLRAQWIVGLYGVTLSPPSM--VMEYLPGGSLDGLLQS-TMELPWELRHRLALDIVRGLSYLHSQTPLILHRDLK 387
            ID  DI + + I+EG YG +   KWRE  +A+K  K++ ++     +FL EC  M  LR   IV   G    PP++  V+EY   GSL  ++Q+  + L WE R R+ALD  +G+ YLHS  P ILHRDLK
Sbjct:  565 IDFNDIMLEKQISEGGYGVIYRAKWRETTVAVKMFKIDGMNENHIRDFLSECHAMEALRHPNIVMFLGACTKPPNLAIVLEYCQRGSLWQVIQNHDIHLTWEDRRRMALDAAKGVLYLHSFNPPILHRDLK 695
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BLAST of mRNA_M-pyrifera_M_contig78075.18355.1 vs. uniprot
Match: A0BRW1_PARTE (Protein kinase domain-containing protein n=2 Tax=Paramecium tetraurelia TaxID=5888 RepID=A0BRW1_PARTE)

HSP 1 Score: 95.5 bits (236), Expect = 2.440e-20
Identity = 55/131 (41.98%), Postives = 77/131 (58.78%), Query Frame = 1 
Query:    4 IDPADIEVLEFIAEGTYGRVDYGKWRELNIALKTLKVEQLSGRAEEEFLHECEVMMGLRAQWIVGLYGVTLSPPSM--VMEYLPGGSLDGLLQS-TMELPWELRHRLALDIVRGLSYLHSQTPLILHRDLK 387
            ID  DI + + I+EG YG +   KWRE  +A+K  K++ ++     +FL EC  M  LR   IV   G    PP++  V+EY   GSL  ++Q+  + L WE R ++ALD  +G+ YLHS  P ILHRDLK
Sbjct:  565 IDFNDIMLEKQISEGGYGVIYKAKWRETTVAVKMFKIDGMNENHIRDFLSECHAMEALRHPNIVMFLGACTKPPNLAIVLEYCQRGSLWQVIQNHDIHLTWEDRRKMALDAAKGVLYLHSFNPPILHRDLK 695
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BLAST of mRNA_M-pyrifera_M_contig78075.18355.1 vs. uniprot
Match: D8M2M2_BLAHO (Protein kinase domain-containing protein n=2 Tax=Blastocystis hominis TaxID=12968 RepID=D8M2M2_BLAHO)

HSP 1 Score: 94.7 bits (234), Expect = 3.650e-20
Identity = 51/134 (38.06%), Postives = 80/134 (59.70%), Query Frame = 1 
Query:   13 ADIEVLEFIAEGTYGRVDYGKWRELNIALKTLKVEQLSGRAEEEFLHECEVMMGLRAQWIVGLYGVTLSPPSMVMEYLPGGSLDGLLQSTME---------LPWELRHRLALDIVRGLSYLHSQTPLILHRDLK 387
            ++IEV E I  G +  V +G +R   +A+K L+V ++S +A  +F  E  +M  LR   IV   G+ + P  +V EY   G+L  LL  T++         +PW+ R R+ALD+ RG+++LH+ TP+I+HRDLK
Sbjct:  224 SEIEVDERIGVGGFAIVYHGMYRGCEVAVKKLRVSRMSAKAIRDFHSEVVLMRALRHPNIVIFMGLVMDPVCLVTEYCHNGNLFDLLHDTVDENEEHYAVQIPWQRRVRIALDVARGMNFLHTSTPIIIHRDLK 357
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BLAST of mRNA_M-pyrifera_M_contig78075.18355.1 vs. uniprot
Match: G0R5A8_ICHMG (Protein kinase, putative n=1 Tax=Ichthyophthirius multifiliis (strain G5) TaxID=857967 RepID=G0R5A8_ICHMG)

HSP 1 Score: 94.7 bits (234), Expect = 4.590e-20
Identity = 50/131 (38.17%), Postives = 79/131 (60.31%), Query Frame = 1 
Query:    4 IDPADIEVLEFIAEGTYGRVDYGKWRELNIALKTLKVEQLSGRAEEEFLHECEVMMGLRAQWIVGLYGVTLSPPS--MVMEYLPGGSLDGLLQS-TMELPWELRHRLALDIVRGLSYLHSQTPLILHRDLK 387
            I+ +++++ + I+EG YG +   KWRE  +A+K  K++ ++     +FL EC  M  LR   IV   G    PP+  +++E+   GSL  LLQ+  + L WE R ++A+D  +G+ YLHS  P +LHRDLK
Sbjct:  665 IEFSELQIEKQISEGGYGIIYRAKWRETTVAVKKFKIDSITESNIRDFLSECHAMEALRHPNIVMFLGACTKPPNFCIILEFCHRGSLWSLLQNHEIALSWEERRKIAIDAAKGVHYLHSCNPPVLHRDLK 795
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BLAST of mRNA_M-pyrifera_M_contig78075.18355.1 vs. uniprot
Match: A0A830D6B8_9LAMI (Serine/threonine-protein kinase ctr1 n=1 Tax=Phtheirospermum japonicum TaxID=374723 RepID=A0A830D6B8_9LAMI)

HSP 1 Score: 94.4 bits (233), Expect = 6.110e-20
Identity = 51/127 (40.16%), Postives = 81/127 (63.78%), Query Frame = 1 
Query:   16 DIEVLEFIAEGTYGRVDYGKWRELNIALKTLKVEQLSGRAEEEFLHECEVMMGLRAQWIVGLYGVTLSPPSM--VMEYLPGGSLDGLL-QSTMELPWELRHRLALDIVRGLSYLHSQTPLILHRDLK 387
            D+++ E I  G+YG V  G+W    +A+K    + +SG A E+F  E E+M+ LR   +V L G  + PP+M  + E+LP GSL  LL + ++ +  + R ++ALD+ +G++YLHS  P+I+HRDLK
Sbjct:  458 DLQIGERIGIGSYGEVYRGEWNGTEVAVKKFMKQDISGDALEQFKCEIEIMLRLRHPNVVLLMGAVMQPPNMSILTEFLPRGSLYKLLHRPSIRIDEKRRIKMALDVAKGMNYLHSSHPVIVHRDLK 584
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BLAST of mRNA_M-pyrifera_M_contig78075.18355.1 vs. uniprot
Match: UPI000711E13A (serine/threonine-protein kinase n=1 Tax=Blastocystis sp. subtype 4 TaxID=944170 RepID=UPI000711E13A)

HSP 1 Score: 94.0 bits (232), Expect = 8.800e-20
Identity = 51/135 (37.78%), Postives = 80/135 (59.26%), Query Frame = 1 
Query:   13 ADIEVLEFIAEGTYGRVDYGKWRELNIALKTLKVEQLSGRAEEEFLHECEVMMGLRAQWIVGLYGVTLSPPSMVMEYLPGGSLDGLLQSTME----------LPWELRHRLALDIVRGLSYLHSQTPLILHRDLK 387
            A+IEV + I  G +  V +G +R   +A+K L+V ++S +A  +F  E  +M  LR   IV   G+ + P  +V EY   G+L  LL  T++          +PW+ R R+ALD+ RG+++LH+ TP+I+HRDLK
Sbjct: 1214 AEIEVDQRIGVGGFAIVYHGMYRGCEVAVKKLRVSRMSAKAIRDFHSEVVLMRALRHPNIVLFMGLVMDPVCLVTEYCHNGNLFDLLHDTVDDEDSENYAVKIPWQRRIRIALDVARGMNFLHTSTPVIIHRDLK 1348
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BLAST of mRNA_M-pyrifera_M_contig78075.18355.1 vs. uniprot
Match: A0A8J4PYR9_9MYCE (Protein kinase domain-containing protein n=1 Tax=Polysphondylium violaceum TaxID=133409 RepID=A0A8J4PYR9_9MYCE)

HSP 1 Score: 93.6 bits (231), Expect = 1.150e-19
Identity = 52/132 (39.39%), Postives = 74/132 (56.06%), Query Frame = 1 
Query:    1 SIDPADIEVLEFIAEGTYGRVDYGKWRELNIALKTLKVEQLSGRAEEEFLHECEVMMGLRAQWIVGLYGVTLSPPSMVM--EYLPGGSLDGLLQST-MELPWELRHRLALDIVRGLSYLHSQTPLILHRDLK 387
            +ID   I + E I +G +G V  G WR   +A+K L    +     +EF  E E+M  LR   ++   G    PP + +  EY+P GSL G+L +  ++LPW L  R+ +D  RG+ YLHS  P+ILHRDLK
Sbjct:  459 NIDIKQIRLGERIGKGNFGEVYKGYWRGSQVAIKKLPAHNVKENVLKEFHREIELMKNLRHPNVIQFLGSCTIPPDICICTEYMPRGSLYGILHNEQIQLPWALVIRMCIDAARGIIYLHSSNPVILHRDLK 590
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BLAST of mRNA_M-pyrifera_M_contig78075.18355.1 vs. uniprot
Match: A0A0K9P3W1_ZOSMR (Protein kinase domain-containing protein n=1 Tax=Zostera marina TaxID=29655 RepID=A0A0K9P3W1_ZOSMR)

HSP 1 Score: 93.6 bits (231), Expect = 1.160e-19
Identity = 54/122 (44.26%), Postives = 77/122 (63.11%), Query Frame = 1 
Query:   31 EFIAEGTYGRVDYGKWRELNIALKTLKVEQLSGRAEEEFLHECEVMMGLRAQWIVGLYGVTLSPP--SMVMEYLPGGSLDGLLQ-STMELPWELRHRLALDIVRGLSYLHSQTPLILHRDLK 387
            E I  G+YG V YG+W    +A+K L  ++LS    EEF+ E  +M  LR   +V   GV    P  S+V E+LP GSL GL++ S  +L  + R ++ALD+ RG++YLHS +P+I+HRDLK
Sbjct:  655 ERIGMGSYGEVYYGEWHGTEVAVKKLLEQELSNDGLEEFMTEVMIMKKLRHPNVVLFMGVVTHVPNLSIVTEFLPRGSLFGLIRRSNNQLNLKRRLKMALDVARGMNYLHSCSPVIVHRDLK 776
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig78075.18355.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
I7MI13_TETTS7.120e-2142.97Tyrosine kinase domain protein n=1 Tax=Tetrahymena... [more]
I7MLK9_TETTS7.180e-2143.85Tyrosine kinase domain protein n=1 Tax=Tetrahymena... [more]
A0CFH2_PARTE9.620e-2142.75Protein kinase domain-containing protein n=1 Tax=P... [more]
A0BRW1_PARTE2.440e-2041.98Protein kinase domain-containing protein n=2 Tax=P... [more]
D8M2M2_BLAHO3.650e-2038.06Protein kinase domain-containing protein n=2 Tax=B... [more]
G0R5A8_ICHMG4.590e-2038.17Protein kinase, putative n=1 Tax=Ichthyophthirius ... [more]
A0A830D6B8_9LAMI6.110e-2040.16Serine/threonine-protein kinase ctr1 n=1 Tax=Phthe... [more]
UPI000711E13A8.800e-2037.78serine/threonine-protein kinase n=1 Tax=Blastocyst... [more]
A0A8J4PYR9_9MYCE1.150e-1939.39Protein kinase domain-containing protein n=1 Tax=P... [more]
A0A0K9P3W1_ZOSMR1.160e-1944.26Protein kinase domain-containing protein n=1 Tax=Z... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig78075contigM-pyrifera_M_contig78075:599..985 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score96.3
Seed ortholog evalue1.1e-17
Seed eggNOG ortholog5911.EAR90768
Preferred nameMAP3K7
KEGG koko:K04417,ko:K04427
KEGG Pathwayko04010,ko04013,ko04064,ko04140,ko04152,ko04214,ko04310,ko04380,ko04520,ko04620,ko04621,ko04622,ko04624,ko04657,ko04660,ko04668,ko05140,ko05145,ko05162,ko05168,ko05169,ko05418,map04010,map04013,map04064,map04140,map04152,map04214,map04310,map04380,map04520,map04620,map04621,map04622,map04624,map04657,map04660,map04668,map05140,map05145,map05162,map05168,map05169,map05418
KEGG ModuleM00686,M00688,M00689
Hectar predicted targeting categoryother localisation
GOsGO:0000123,GO:0000165,GO:0000166,GO:0000186,GO:0000187,GO:0001525,GO:0001568,GO:0001654,GO:0001700,GO:0001736,GO:0001738,GO:0001745,GO:0001817,GO:0001819,GO:0001838,GO:0001841,GO:0001932,GO:0001934,GO:0001944,GO:0002009,GO:0002165,GO:0002218,GO:0002220,GO:0002221,GO:0002223,GO:0002224,GO:0002225,GO:0002237,GO:0002252,GO:0002253,GO:0002376,GO:0002429,GO:0002682,GO:0002684,GO:0002697,GO:0002699,GO:0002700,GO:0002702,GO:0002703,GO:0002705,GO:0002706,GO:0002708,GO:0002709,GO:0002711,GO:0002718,GO:0002720,GO:0002724,GO:0002726,GO:0002753,GO:0002755,GO:0002757,GO:0002758,GO:0002759,GO:0002760,GO:0002764,GO:0002768,GO:0002784,GO:0002786,GO:0002803,GO:0002805,GO:0002807,GO:0002808,GO:0002813,GO:0002819,GO:0002821,GO:0002822,GO:0002824,GO:0002831,GO:0002833,GO:0002920,GO:0002922,GO:0003674,GO:0003824,GO:0004672,GO:0004674,GO:0004706,GO:0004708,GO:0004709,GO:0004712,GO:0005102,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005671,GO:0005737,GO:0005768,GO:0005829,GO:0006325,GO:0006355,GO:0006464,GO:0006468,GO:0006473,GO:0006475,GO:0006508,GO:0006793,GO:0006796,GO:0006807,GO:0006915,GO:0006950,GO:0006952,GO:0006955,GO:0006963,GO:0006964,GO:0006996,GO:0007154,GO:0007163,GO:0007164,GO:0007165,GO:0007166,GO:0007167,GO:0007178,GO:0007179,GO:0007223,GO:0007249,GO:0007250,GO:0007252,GO:0007254,GO:0007256,GO:0007267,GO:0007275,GO:0007389,GO:0007391,GO:0007399,GO:0007423,GO:0007444,GO:0007472,GO:0007477,GO:0007552,GO:0007560,GO:0008144,GO:0008150,GO:0008152,GO:0008219,GO:0009605,GO:0009607,GO:0009615,GO:0009617,GO:0009653,GO:0009719,GO:0009790,GO:0009791,GO:0009792,GO:0009886,GO:0009887,GO:0009888,GO:0009889,GO:0009891,GO:0009892,GO:0009893,GO:0009894,GO:0009896,GO:0009966,GO:0009967,GO:0009968,GO:0009987,GO:0010008,GO:0010033,GO:0010468,GO:0010506,GO:0010508,GO:0010556,GO:0010562,GO:0010604,GO:0010628,GO:0010646,GO:0010647,GO:0010648,GO:0010939,GO:0010941,GO:0012501,GO:0012505,GO:0014069,GO:0016020,GO:0016043,GO:0016055,GO:0016239,GO:0016241,GO:0016301,GO:0016310,GO:0016318,GO:0016331,GO:0016569,GO:0016570,GO:0016573,GO:0016579,GO:0016740,GO:0016772,GO:0016773,GO:0017076,GO:0018107,GO:0018193,GO:0018205,GO:0018210,GO:0018393,GO:0018394,GO:0019219,GO:0019220,GO:0019221,GO:0019222,GO:0019538,GO:0019899,GO:0019900,GO:0019901,GO:0021915,GO:0023014,GO:0023051,GO:0023052,GO:0023056,GO:0023057,GO:0030522,GO:0030554,GO:0030971,GO:0031090,GO:0031098,GO:0031248,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031328,GO:0031329,GO:0031331,GO:0031333,GO:0031347,GO:0031349,GO:0031399,GO:0031401,GO:0031410,GO:0031625,GO:0031974,GO:0031981,GO:0031982,GO:0032101,GO:0032103,GO:0032147,GO:0032268,GO:0032270,GO:0032279,GO:0032496,GO:0032501,GO:0032502,GO:0032553,GO:0032555,GO:0032559,GO:0032663,GO:0032743,GO:0032872,GO:0032874,GO:0032991,GO:0033554,GO:0033674,GO:0033993,GO:0034097,GO:0034248,GO:0034250,GO:0035148,GO:0035220,GO:0035239,GO:0035295,GO:0035556,GO:0035567,GO:0035639,GO:0035872,GO:0036094,GO:0036211,GO:0038061,GO:0038093,GO:0038095,GO:0042067,GO:0042221,GO:0042325,GO:0042327,GO:0042742,GO:0042802,GO:0042981,GO:0043009,GO:0043066,GO:0043067,GO:0043069,GO:0043085,GO:0043122,GO:0043123,GO:0043167,GO:0043168,GO:0043170,GO:0043207,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043254,GO:0043276,GO:0043405,GO:0043406,GO:0043408,GO:0043410,GO:0043412,GO:0043506,GO:0043507,GO:0043543,GO:0043549,GO:0043900,GO:0043902,GO:0043966,GO:0044087,GO:0044093,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044389,GO:0044422,GO:0044424,GO:0044428,GO:0044433,GO:0044440,GO:0044444,GO:0044446,GO:0044451,GO:0044456,GO:0044464,GO:0045087,GO:0045088,GO:0045089,GO:0045202,GO:0045859,GO:0045860,GO:0045937,GO:0046328,GO:0046330,GO:0048513,GO:0048514,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048563,GO:0048569,GO:0048583,GO:0048584,GO:0048585,GO:0048592,GO:0048598,GO:0048646,GO:0048707,GO:0048729,GO:0048731,GO:0048749,GO:0048802,GO:0048856,GO:0050776,GO:0050778,GO:0050789,GO:0050790,GO:0050794,GO:0050829,GO:0050851,GO:0050852,GO:0050896,GO:0051090,GO:0051091,GO:0051092,GO:0051128,GO:0051129,GO:0051171,GO:0051173,GO:0051174,GO:0051239,GO:0051240,GO:0051246,GO:0051247,GO:0051252,GO:0051276,GO:0051338,GO:0051347,GO:0051403,GO:0051607,GO:0051704,GO:0051707,GO:0051716,GO:0060255,GO:0060429,GO:0060544,GO:0060546,GO:0060547,GO:0060548,GO:0060562,GO:0061057,GO:0065007,GO:0065009,GO:0070013,GO:0070302,GO:0070304,GO:0070423,GO:0070498,GO:0070555,GO:0070646,GO:0070647,GO:0070848,GO:0070887,GO:0071216,GO:0071219,GO:0071222,GO:0071310,GO:0071345,GO:0071347,GO:0071363,GO:0071396,GO:0071495,GO:0071559,GO:0071560,GO:0071704,GO:0071840,GO:0071900,GO:0071902,GO:0072175,GO:0072358,GO:0072359,GO:0080090,GO:0080134,GO:0080135,GO:0090596,GO:0097110,GO:0097159,GO:0097367,GO:0097458,GO:0097708,GO:0098542,GO:0098588,GO:0098794,GO:0098805,GO:0098984,GO:0099572,GO:0140096,GO:0198738,GO:1900424,GO:1900426,GO:1901222,GO:1901224,GO:1901265,GO:1901363,GO:1901564,GO:1901700,GO:1901701,GO:1902442,GO:1902443,GO:1902493,GO:1902494,GO:1902531,GO:1902533,GO:1902562,GO:1903506,GO:1905114,GO:1990234,GO:1990782,GO:2000112,GO:2000377,GO:2000378,GO:2001141,GO:2001233,GO:2001234
EggNOG free text desc.Regulator of chromosome condensation (RCC1) repeat
EggNOG OGs3ZBIY@5878,COG0515@1,KOG0192@2759
EC2.7.11.25
COG Functional cat.T
Best tax levelCiliophora
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01001
Exons1
Model size387
Cds size387
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816682.0525198-CDS-M-pyrifera_M_contig78075:598..9851622816682.0525198-CDS-M-pyrifera_M_contig78075:598..985Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig78075 599..985 +
1692278116.8171659-CDS-M-pyrifera_M_contig78075:598..9851692278116.8171659-CDS-M-pyrifera_M_contig78075:598..985Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig78075 599..985 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig78075.18355.1prot_M-pyrifera_M_contig78075.18355.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig78075 599..985 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig78075.18355.1

>prot_M-pyrifera_M_contig78075.18355.1 ID=prot_M-pyrifera_M_contig78075.18355.1|Name=mRNA_M-pyrifera_M_contig78075.18355.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=129bp
SIDPADIEVLEFIAEGTYGRVDYGKWRELNIALKTLKVEQLSGRAEEEFL
HECEVMMGLRAQWIVGLYGVTLSPPSMVMEYLPGGSLDGLLQSTMELPWE
LRHRLALDIVRGLSYLHSQTPLILHRDLK
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mRNA from alignment at M-pyrifera_M_contig78075:599..985+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig78075.18355.1 ID=mRNA_M-pyrifera_M_contig78075.18355.1|Name=mRNA_M-pyrifera_M_contig78075.18355.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=387bp|location=Sequence derived from alignment at M-pyrifera_M_contig78075:599..985+ (Macrocystis pyrifera P11B4 male)
AGCATTGACCCTGCGGATATCGAGGTATTAGAATTTATCGCGGAGGGGAC
ATATGGTCGAGTGGACTACGGGAAGTGGCGGGAATTAAACATTGCGTTAA
AGACGTTAAAGGTAGAGCAATTAAGCGGACGCGCAGAAGAAGAGTTTTTG
CATGAGTGCGAAGTCATGATGGGCTTGCGTGCGCAGTGGATAGTTGGTTT
GTATGGAGTGACGTTGTCACCACCGTCGATGGTGATGGAGTATTTGCCGG
GTGGTAGTTTAGATGGTCTATTACAAAGTACGATGGAATTACCGTGGGAG
CTTCGACATCGCTTAGCCTTGGATATTGTGCGGGGCTTAAGTTACTTGCA
CAGTCAAACGCCACTGATACTGCACCGAGATTTAAAG
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig78075:599..985+

>mRNA_M-pyrifera_M_contig78075.18355.1 ID=mRNA_M-pyrifera_M_contig78075.18355.1|Name=mRNA_M-pyrifera_M_contig78075.18355.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=774bp|location=Sequence derived from alignment at M-pyrifera_M_contig78075:599..985+ (Macrocystis pyrifera P11B4 male)
AGCATTGACCCTGCGGATATCGAGGTATTAGAATTTATCGCGGAGGGGAC
ATATGGTCGAGTGGACTACGGGAAGTGGCGGGAATTAAACATTGCGTTAA
AGACGTTAAAGGTAGAGCAATTAAGCGGACGCGCAGAAGAAGAGTTTTTG
CATGAGTGCGAAGTCATGATGGGCTTGCGTGCGCAGTGGATAGTTGGTTT
GTATGGAGTGACGTTGTCACCACCGTCGATGGTGATGGAGTATTTGCCGG
GTGGTAGTTTAGATGGTCTATTACAAAGTACGATGGAATTACCGTGGGAG
CTTCGACATCGCTTAGCCTTGGATATTGTGCGGGGCTTAAGTTACTTGCA
CAGTCAAACGCCACTGATACTGCACCGAGATTTAAAGAGCATTGACCCTG
CGGATATCGAGGTATTAGAATTTATCGCGGAGGGGACATATGGTCGAGTG
GACTACGGGAAGTGGCGGGAATTAAACATTGCGTTAAAGACGTTAAAGGT
AGAGCAATTAAGCGGACGCGCAGAAGAAGAGTTTTTGCATGAGTGCGAAG
TCATGATGGGCTTGCGTGCGCAGTGGATAGTTGGTTTGTATGGAGTGACG
TTGTCACCACCGTCGATGGTGATGGAGTATTTGCCGGGTGGTAGTTTAGA
TGGTCTATTACAAAGTACGATGGAATTACCGTGGGAGCTTCGACATCGCT
TAGCCTTGGATATTGTGCGGGGCTTAAGTTACTTGCACAGTCAAACGCCA
CTGATACTGCACCGAGATTTAAAG
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