mRNA_M-pyrifera_M_contig78073.18354.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig78073.18354.1 vs. uniprot
Match: A0A433PJF9_9FUNG (Nucleoporin-domain-containing protein n=1 Tax=Endogone sp. FLAS-F59071 TaxID=2340872 RepID=A0A433PJF9_9FUNG) HSP 1 Score: 79.3 bits (194), Expect = 4.340e-14 Identity = 56/167 (33.53%), Postives = 85/167 (50.90%), Query Frame = 1 Query: 31 SELATQHVLPRLRLLCLSDEGLHVLSKQRPVDVLRTILRQGPQDGLQLDGFFQLYGLEQACSCCLVLACASLQLELAPQQSSLLNPVHCLDRANEGVGQLAAEAFFAKGGSATSSN----------AFEWGRAAGTAPQVLFSGKVNGLALYLARRLQLLWNEPFVK 501 +ELATQ P + L L++ G++VLSKQRP+D+L+ +L + + LD FF +YG QAC+ CL +AC + A S + + + V A FF KGG ++ + GR T + FSG+ +GLALY AR ++ +W + K Sbjct: 571 NELATQLSRPPRQFLVLTNSGINVLSKQRPIDILQQLLIESGGNDQDLDYFFDMYGRAQACAMCLGIACFNPYASSAAPTRSFASAAAPVRGLSPTVVAGATRLFFEKGGKPALNDRPAPPPGVVGTADLGRLM-TTSEPSFSGRHDGLALYFARIVRPIWKQKVAK 736
BLAST of mRNA_M-pyrifera_M_contig78073.18354.1 vs. uniprot
Match: A0A7S1KPB3_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Percolomonas cosmopolitus TaxID=63605 RepID=A0A7S1KPB3_9EUKA) HSP 1 Score: 77.8 bits (190), Expect = 1.310e-13 Identity = 55/163 (33.74%), Postives = 82/163 (50.31%), Query Frame = 1 Query: 31 SELATQHVLPRLRLLCLSDEGLHVLSKQRPVDVLRTILRQ-----GPQDGLQLDGFFQLYGLEQACSCCLVLAC-ASLQLELAPQQSSLLNPVHCLDRANEGVGQLAAEAFFAKGGSATSSNAFEWGRAAG-TAPQVLFSGKVNGLALYLARRLQLLWNEPFV 498 +ELATQH P +CLS+ G+ ++ K RPVD+L+ IL+ G + + FFQ YG ++AC CL++AC A+ + + SS + +A + + EA K S+ SSN G AP V +S N L LY +R + +W P V Sbjct: 372 NELATQHYYPPREFVCLSNTGVQMIKKYRPVDMLKLILQDTSSSMGDNQDI-IKNFFQQYGRDEACYMCLLIACSAASEGDTQDHASSFATSSEMVRKAKDLFFTMGGEATPPKRSSSYSSNLQSGGMGGPIAAPSVTYSSAHNALMLYFSRMIAPMWYSPIV 533
BLAST of mRNA_M-pyrifera_M_contig78073.18354.1 vs. uniprot
Match: A0A1Y1X5A3_9FUNG (Nucleoporin-domain-containing protein n=1 Tax=Basidiobolus meristosporus CBS 931.73 TaxID=1314790 RepID=A0A1Y1X5A3_9FUNG) HSP 1 Score: 77.8 bits (190), Expect = 1.480e-13 Identity = 55/165 (33.33%), Postives = 86/165 (52.12%), Query Frame = 1 Query: 31 SELATQHVLPRLRLLCLSDEGLHVLSKQRPVDVLRTILRQGPQDGLQLDGFFQLYGLEQACSCCLVLACASLQLELAPQQSSLLNPVHCLDRANEGVGQLAAEAFFAKGG---------SATSSNAFEWGRAAGTAPQVLFSGKVNGLALYLARRLQLLWNEPFV 498 +ELATQ P R L L++ G+++ KQRP+D+L +L + F + YG Q C+ CL + C + +A S + + L+R+ V A + FF GG S +SN + GR T P+ ++SG+ +GLALYLAR + +W +PF+ Sbjct: 495 NELATQLAYPPRRFLVLTNSGINMFVKQRPIDILNQLLTSPSTQEADILAFIENYGRSQVCAMCLAIICGHPSVSVAGFDSLMSSQ---LNRSQSSVSS-AQKVFFEYGGKPILVDMQSSIITSN--DVGRPLFT-PEPIYSGRHDGLALYLARLVNPIWKKPFI 652
BLAST of mRNA_M-pyrifera_M_contig78073.18354.1 vs. uniprot
Match: A0A1Y2ERQ8_9FUNG (Nucleoporin-domain-containing protein n=5 Tax=Neocallimastigaceae TaxID=29007 RepID=A0A1Y2ERQ8_9FUNG) HSP 1 Score: 77.0 bits (188), Expect = 2.730e-13 Identity = 53/161 (32.92%), Postives = 79/161 (49.07%), Query Frame = 1 Query: 31 SELATQHVLPRLRLLCLSDEGLHVLSKQRPVDVLRTILRQGPQDGLQLDGFFQLYGLEQACSCCLVLAC----ASLQLELAPQQSSLLNPVHCLDRANEGVGQLAAEAFFAKGGSATSSNAFEWGRAAGTAPQVLFSGKVNGLALYLARRLQLLWNEPFVK 501 +EL +QH P L L++ G+ VL++QRP+D L ++L +D + FF Y EQAC+ CL + C AS P S+ + +D A + FA G + + GR T P+ +FSGK NGL LYL R L+ +W + + Sbjct: 461 NELVSQHFFPVRHFLVLTNSGVTVLAQQRPIDYLNSLLENYNEDPNSIRSFFDFYTPEQACAMCLAITCGHPYASNSTPGLPSYLSIAPSIPVIDAAKRCFFEFGGYPTFA-GRPFRNDAISDVGRPL-TIPEPVFSGKHNGLVLYLTRLLRSIWKQNITR 619
BLAST of mRNA_M-pyrifera_M_contig78073.18354.1 vs. uniprot
Match: A0A4T0NRW4_9BASI (Mitochondrial genome maintenance protein MGM101 n=6 Tax=Wallemia mellicola TaxID=1708541 RepID=A0A4T0NRW4_9BASI) HSP 1 Score: 75.5 bits (184), Expect = 9.490e-13 Identity = 65/193 (33.68%), Postives = 99/193 (51.30%), Query Frame = 1 Query: 4 SNRSGLQRKSELATQHV------LPRLRLLCLSDEGLHVLSKQRPVDVLRTILRQ---GPQDGLQLDGFFQLYGLEQACSCCLVLACA-----SLQLELAPQQSSLLNPVHCLDRANEGVGQLAAEAFFAKGG-----------SATSSNAFEWGRAAGTAPQVLFSGKVNGLALYLARRLQLLWNEPFVKVT 507 S R GLQ K ++A + LPR R L L++ GL V++KQRP+D+LR IL G +D ++ FF +G +Q+C+ L +A S+ +L P S+++ + + Q A F+ GG +ATS N A T ++LFSG+ NGLALYL+R L+ +W E K++ Sbjct: 674 SMRKGLQGKEQVAMSELTVQMAYLPR-RFLVLTNMGLSVIAKQRPIDILRNILESSSTGSRDQ-EIVSFFNNFGKDQSCAMALAIAAGNPVALSMGEDLYPAGSNVVTEPVPPATLSADITQSARRLFYDFGGKPVSIDRGYPTAATSMNL----DALSTNTEILFSGRHNGLALYLSRLLRPIWKEKVTKLS 860
BLAST of mRNA_M-pyrifera_M_contig78073.18354.1 vs. uniprot
Match: A0A4T0M6G6_9BASI (Mitochondrial genome maintenance protein MGM101 n=2 Tax=Wallemia mellicola TaxID=1708541 RepID=A0A4T0M6G6_9BASI) HSP 1 Score: 75.5 bits (184), Expect = 9.670e-13 Identity = 65/193 (33.68%), Postives = 99/193 (51.30%), Query Frame = 1 Query: 4 SNRSGLQRKSELATQHV------LPRLRLLCLSDEGLHVLSKQRPVDVLRTILRQ---GPQDGLQLDGFFQLYGLEQACSCCLVLACA-----SLQLELAPQQSSLLNPVHCLDRANEGVGQLAAEAFFAKGG-----------SATSSNAFEWGRAAGTAPQVLFSGKVNGLALYLARRLQLLWNEPFVKVT 507 S R GLQ K ++A + LPR R L L++ GL V++KQRP+D+LR IL G +D ++ FF +G +Q+C+ L +A S+ +L P S+++ + + Q A F+ GG +ATS N A T ++LFSG+ NGLALYL+R L+ +W E K++ Sbjct: 1190 SMRKGLQGKEQVAMSELTVQMAYLPR-RFLVLTNMGLSVIAKQRPIDILRNILESSSTGSRDQ-EIVSFFNNFGKDQSCAMALAIAAGNPVALSMGEDLYPAGSNVVTEPVPPATLSADITQSARRLFYDFGGKPVSIDRGYPTAATSMNL----DALSTNTEILFSGRHNGLALYLSRLLRPIWKEKVTKLS 1376
BLAST of mRNA_M-pyrifera_M_contig78073.18354.1 vs. uniprot
Match: A0A1Y1YV87_9FUNG (Nucleoporin-domain-containing protein n=1 Tax=Basidiobolus meristosporus CBS 931.73 TaxID=1314790 RepID=A0A1Y1YV87_9FUNG) HSP 1 Score: 74.3 bits (181), Expect = 2.350e-12 Identity = 54/167 (32.34%), Postives = 82/167 (49.10%), Query Frame = 1 Query: 31 SELATQHVLPRLRLLCLSDEGLHVLSKQRPVDVLRTILRQGPQDGLQLDGFFQLYGLEQACSCCLVLACASLQLELAPQQSSLLNPVHCLDRANEGVGQLAAEAFFAKGGSATS---SNAFEWGRAAGTAPQV-----LFSGKVNGLALYLARRLQLLWNEPFVKVT 507 +ELATQ P L L++ G+++LSKQRP+DV +L L F YG Q C+ CL + C + + Q P +N L A+A + K G S S + G +G Q ++SG+ +GLALY+AR ++ +W +PF++VT Sbjct: 476 NELATQLTFPPRHFLVLTNSGINILSKQRPIDVFVQLLHNPSTQEADLLSFIDNYGKAQICAMCLAIVCGHPAVSGSTQTKFQSAPFGH-QASNNQTSVLGAKAVYIKYGGRPSFVESPTYTHG-GSGVERQTPTQDFIYSGQHDGLALYIARLIKPIWKKPFIRVT 640
BLAST of mRNA_M-pyrifera_M_contig78073.18354.1 vs. uniprot
Match: D2UXP7_NAEGR (Nucleoporin 155 n=1 Tax=Naegleria gruberi TaxID=5762 RepID=D2UXP7_NAEGR) HSP 1 Score: 74.3 bits (181), Expect = 2.360e-12 Identity = 54/161 (33.54%), Postives = 84/161 (52.17%), Query Frame = 1 Query: 31 SELATQHVLPRLRLLCLSDEGLHVLSKQRPVDVLRTILRQGPQDGLQLDGFFQLYGLEQACSCCLVLACASLQLELAPQQSSLLNPVHCLDRANEGVGQLAAEAFFAKGG-------SATSSNAFEWGRAAGTAPQVLFSGKVNGLALYLARRLQLLWNEP 492 +EL+ QH+ P +CLS+ G+H+L K RPVD L+ IL+Q D L L+ FF Y ++AC+ C++LACA P +++ + +E + + A +AFF GG +N G +A + +S + NGL LY R ++ LW P Sbjct: 508 NELSFQHIKPPREFVCLSNNGMHLLVKLRPVDFLQQILQQSQSDSL-LNNFFTKYSDDEACAMCVMLACAP------PAYNNITDHDQQPTLHDEMLIKRAEQAFFKYGGLPRLESQERNITNNTMGGPV--SAIDIKYSAQHNGLYLYFTRLMRPLWISP 659
BLAST of mRNA_M-pyrifera_M_contig78073.18354.1 vs. uniprot
Match: A0A4T0JI01_WALIC (Mitochondrial genome maintenance protein MGM101 n=3 Tax=Wallemia ichthyophaga TaxID=245174 RepID=A0A4T0JI01_WALIC) HSP 1 Score: 74.3 bits (181), Expect = 2.390e-12 Identity = 64/192 (33.33%), Postives = 94/192 (48.96%), Query Frame = 1 Query: 4 SNRSGLQRKSELATQHV------LPRLRLLCLSDEGLHVLSKQRPVDVLRTILRQGPQDGL--QLDGFFQLYGLEQACSCCLVLACA-----SLQLELAPQQSSLLNPVHCLDRANEGVGQLAAEAFFAKGG-----------SATSSNAFEWGRAAGTAPQVLFSGKVNGLALYLARRLQLLWNEPFVKVT 507 S R GLQ K ++A + LPR R L L++ GL V++KQRPVDVLR IL ++ FF +G +Q+C+ L +A S+ +L P S++ + + Q A F+ GG +ATS N A T ++LFSG+ NGL LYL+R L+ +W E K++ Sbjct: 698 SMRKGLQGKEQVAMSELTVQTAYLPR-RFLVLTNMGLSVIAKQRPVDVLRNILESSSTSSRDQEIVSFFNNFGKDQSCAMALAIAAGNPIALSMGEDLYPAGSNIATEPAPPATLSADITQSARRLFYDFGGRPVSIDRGYPAAATSMNL----DALSTNTEILFSGRHNGLVLYLSRLLRPIWKEKVTKLS 884
BLAST of mRNA_M-pyrifera_M_contig78073.18354.1 vs. uniprot
Match: A0A0F7SWC5_PHARH (Nuclear pore complex, Nup155 component (D Nup154, sc Nup157/Nup170) n=1 Tax=Phaffia rhodozyma TaxID=264483 RepID=A0A0F7SWC5_PHARH) HSP 1 Score: 73.2 bits (178), Expect = 5.970e-12 Identity = 59/169 (34.91%), Postives = 85/169 (50.30%), Query Frame = 1 Query: 16 GLQRKSELATQHVLPRLRLLCLSDEGLHVLSKQRPVDVLRTILRQGPQDGLQ--LDGFFQLYGLEQACSCCLVLACASLQLELAPQQSSLLNPVHCLDRANEGVGQLAAEAFFAKGGSATSSNAFEW--GRAAG-TAPQVLFSGKVNGLALYLARRLQLLWNEPFVKVT 507 G R +ELA Q + + LL L+ EG+HV+ KQRPVDVL+ IL G G + + FF YG +Q+C+ CL LA + S PV + V A F+ GG + G AAG + QV FSG+ GLA+Y +R ++ LW + +++ Sbjct: 599 GELRLNELAAQTGVQQRSLLVLTSEGMHVIGKQRPVDVLKGILEAGASVGREGEIAAFFSNYGRDQSCAMCLALASSXXXXXXXXXXSP--GPV------SPDVVTGAKRLFYELGGKPVRVDRGYGHPGTAAGEVSSQVFFSGRHEGLAIYFSRLIRPLWRDKVTRLS 759 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig78073.18354.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig78073.18354.1 >prot_M-pyrifera_M_contig78073.18354.1 ID=prot_M-pyrifera_M_contig78073.18354.1|Name=mRNA_M-pyrifera_M_contig78073.18354.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=169bp RSNRSGLQRKSELATQHVLPRLRLLCLSDEGLHVLSKQRPVDVLRTILRQback to top mRNA from alignment at M-pyrifera_M_contig78073:485..991+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig78073.18354.1 ID=mRNA_M-pyrifera_M_contig78073.18354.1|Name=mRNA_M-pyrifera_M_contig78073.18354.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=507bp|location=Sequence derived from alignment at M-pyrifera_M_contig78073:485..991+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig78073:485..991+ >mRNA_M-pyrifera_M_contig78073.18354.1 ID=mRNA_M-pyrifera_M_contig78073.18354.1|Name=mRNA_M-pyrifera_M_contig78073.18354.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1014bp|location=Sequence derived from alignment at M-pyrifera_M_contig78073:485..991+ (Macrocystis pyrifera P11B4 male)back to top |