mRNA_M-pyrifera_M_contig77930.18331.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig77930.18331.1
Unique NamemRNA_M-pyrifera_M_contig77930.18331.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig77930.18331.1 vs. uniprot
Match: A0A517X2X5_9PLAN (Nickel and cobalt resistance protein CnrA n=2 Tax=Gimesia aquarii TaxID=2527964 RepID=A0A517X2X5_9PLAN)

HSP 1 Score: 609 bits (1571), Expect = 5.220e-208
Identity = 308/332 (92.77%), Postives = 324/332 (97.59%), Query Frame = 1
Query:    1 RLFIPLGIAYIVSILASLLVSLTVTPVLSYYLLPQAKATHAHQDGRLLRVLKWGASFLIRFSMRRAGILLVLTWALVGYSVWELSKLGADFLPKFDEGSVQINVSLPGGSSLKASNEASSLIDSQLVKLQKSAENPNGPVLHFFRRTGRAELDEHAQPVNVGEYILTMNPDSDHGRDEFLDTLLSDLRSNVPGVGIEAEQPLSHLISHMLSGVKAQVGIKLYGDDLDKLRELAGEVRDAITDIPGVTPPIIDPQERVDELHVVLKPDELAFFGLSREYIADFVQTALKGEAVSQVLDGQRRFDLVIKLNEEHRSDPYNLGELRIDLPDGRGQ 996
            RLF PLG+AYIVSILASLLVSLTVTPVLSYYLLPQAKATH HQDGRLLRVLKWGASFLIRFS+RRAGILLVLTW LVG+SVWELSKLGADFLPKFDEGSVQINV+LPGGSSLKASNEAS+LID QLVK+QKS++NPNGPVLHFFRRTGRAELDEHAQPVNVGEYILTMNPDSDHGRDEFLDTLLSDLRSNVPGVGIEAEQPLSHLISHMLSGVKAQ+GIKLYGDDLDKLRELAG+VRD I D+PGVTPPIIDPQERVDELHVVLKPDELAFFGLSREY+A+FVQTALKGEA+SQVL GQRRFDLVIKLNE +RSDPYNLGELR+DLPDGRGQ
Sbjct:  552 RLFAPLGVAYIVSILASLLVSLTVTPVLSYYLLPQAKATHNHQDGRLLRVLKWGASFLIRFSIRRAGILLVLTWVLVGFSVWELSKLGADFLPKFDEGSVQINVTLPGGSSLKASNEASALIDKQLVKMQKSSDNPNGPVLHFFRRTGRAELDEHAQPVNVGEYILTMNPDSDHGRDEFLDTLLSDLRSNVPGVGIEAEQPLSHLISHMLSGVKAQIGIKLYGDDLDKLRELAGQVRDVIADVPGVTPPIIDPQERVDELHVVLKPDELAFFGLSREYVANFVQTALKGEAISQVLVGQRRFDLVIKLNELYRSDPYNLGELRLDLPDGRGQ 883          
BLAST of mRNA_M-pyrifera_M_contig77930.18331.1 vs. uniprot
Match: A0A3D3R9E7_9PLAN (CusA/CzcA family heavy metal efflux RND transporter (Fragment) n=1 Tax=Gimesia maris TaxID=122 RepID=A0A3D3R9E7_9PLAN)

HSP 1 Score: 582 bits (1499), Expect = 1.290e-203
Identity = 292/332 (87.95%), Postives = 320/332 (96.39%), Query Frame = 1
Query:    1 RLFIPLGIAYIVSILASLLVSLTVTPVLSYYLLPQAKATHAHQDGRLLRVLKWGASFLIRFSMRRAGILLVLTWALVGYSVWELSKLGADFLPKFDEGSVQINVSLPGGSSLKASNEASSLIDSQLVKLQKSAENPNGPVLHFFRRTGRAELDEHAQPVNVGEYILTMNPDSDHGRDEFLDTLLSDLRSNVPGVGIEAEQPLSHLISHMLSGVKAQVGIKLYGDDLDKLRELAGEVRDAITDIPGVTPPIIDPQERVDELHVVLKPDELAFFGLSREYIADFVQTALKGEAVSQVLDGQRRFDLVIKLNEEHRSDPYNLGELRIDLPDGRGQ 996
            RLF+PLGIAYIVSILASLLVSL+VTPVLSYYLLPQAKATH H DGRLL++LKWGA FLIRFSMRRAGILLVLTW LVG SVWELSKLGADFLPKFDEGSVQINV+LPGGSSLKASNEASSLID+QLVK+QKS ENP GPVLHFFRRTGRAE DEHAQPVNVGEYILTMN D+++ RDEFL+TLL+D+++NVPGVGIEAEQPLSHLISHMLSGVKAQVGIK+YGDDLDKLRELAG+VRDAITDIPGVTPPIIDPQERVDELHVVLKP+ELA+FGLSREY+ADFV+TALKGEAVSQVL+GQRRFDL++KL+E +RSDPYNLG LR++LPDGRGQ
Sbjct:   55 RLFVPLGIAYIVSILASLLVSLSVTPVLSYYLLPQAKATHDHTDGRLLQLLKWGAGFLIRFSMRRAGILLVLTWVLVGVSVWELSKLGADFLPKFDEGSVQINVTLPGGSSLKASNEASSLIDAQLVKMQKSQENPQGPVLHFFRRTGRAERDEHAQPVNVGEYILTMNQDANYDRDEFLETLLTDMKTNVPGVGIEAEQPLSHLISHMLSGVKAQVGIKIYGDDLDKLRELAGDVRDAITDIPGVTPPIIDPQERVDELHVVLKPEELAYFGLSREYVADFVETALKGEAVSQVLEGQRRFDLIVKLDEPYRSDPYNLGALRLELPDGRGQ 386          
BLAST of mRNA_M-pyrifera_M_contig77930.18331.1 vs. uniprot
Match: A0A518I9N4_9PLAN (Nickel and cobalt resistance protein CnrA n=11 Tax=Planctomycetaceae TaxID=126 RepID=A0A518I9N4_9PLAN)

HSP 1 Score: 582 bits (1501), Expect = 1.860e-197
Identity = 292/332 (87.95%), Postives = 320/332 (96.39%), Query Frame = 1
Query:    1 RLFIPLGIAYIVSILASLLVSLTVTPVLSYYLLPQAKATHAHQDGRLLRVLKWGASFLIRFSMRRAGILLVLTWALVGYSVWELSKLGADFLPKFDEGSVQINVSLPGGSSLKASNEASSLIDSQLVKLQKSAENPNGPVLHFFRRTGRAELDEHAQPVNVGEYILTMNPDSDHGRDEFLDTLLSDLRSNVPGVGIEAEQPLSHLISHMLSGVKAQVGIKLYGDDLDKLRELAGEVRDAITDIPGVTPPIIDPQERVDELHVVLKPDELAFFGLSREYIADFVQTALKGEAVSQVLDGQRRFDLVIKLNEEHRSDPYNLGELRIDLPDGRGQ 996
            RLF+PLG+AYIVSILASLLVSLTVTPVLS+YLLPQAKATH HQDGRLLRVLKWGA +LIRFSMR A +LL+LTWALVG SVWELSKLGADFLPKFDEGSVQINV+LPGGSSLKASNEASSLID+QLVK+QKS + P  P+LHFFRRTGRAELDEHAQPVNVGEYILTMNP++++ RDEFL+TLLS+L +NVPGVGIEAEQPLSHLISHMLSGVKAQVGIKLYGDDLDKLRELAG+VRDAITDIPGVTPPIIDPQERVDELHVVLKPDELA+FGLSREY+A FV+TALKGEAVSQVL+GQRRFDL+IKLNE++RSDPYNLGELR++LPDGRGQ
Sbjct:  552 RLFVPLGVAYIVSILASLLVSLTVTPVLSFYLLPQAKATHEHQDGRLLRVLKWGAGYLIRFSMRHAAVLLLLTWALVGVSVWELSKLGADFLPKFDEGSVQINVTLPGGSSLKASNEASSLIDAQLVKMQKSEDKPQEPILHFFRRTGRAELDEHAQPVNVGEYILTMNPEANYDRDEFLETLLSNLETNVPGVGIEAEQPLSHLISHMLSGVKAQVGIKLYGDDLDKLRELAGDVRDAITDIPGVTPPIIDPQERVDELHVVLKPDELAYFGLSREYVARFVETALKGEAVSQVLEGQRRFDLIIKLNEQYRSDPYNLGELRLELPDGRGQ 883          
BLAST of mRNA_M-pyrifera_M_contig77930.18331.1 vs. uniprot
Match: A0A518AED4_9PLAN (Nickel and cobalt resistance protein CnrA n=17 Tax=Planctomycetaceae TaxID=126 RepID=A0A518AED4_9PLAN)

HSP 1 Score: 578 bits (1489), Expect = 1.160e-195
Identity = 291/332 (87.65%), Postives = 316/332 (95.18%), Query Frame = 1
Query:    1 RLFIPLGIAYIVSILASLLVSLTVTPVLSYYLLPQAKATHAHQDGRLLRVLKWGASFLIRFSMRRAGILLVLTWALVGYSVWELSKLGADFLPKFDEGSVQINVSLPGGSSLKASNEASSLIDSQLVKLQKSAENPNGPVLHFFRRTGRAELDEHAQPVNVGEYILTMNPDSDHGRDEFLDTLLSDLRSNVPGVGIEAEQPLSHLISHMLSGVKAQVGIKLYGDDLDKLRELAGEVRDAITDIPGVTPPIIDPQERVDELHVVLKPDELAFFGLSREYIADFVQTALKGEAVSQVLDGQRRFDLVIKLNEEHRSDPYNLGELRIDLPDGRGQ 996
            RLF+PLG+AYIVSILASLLVSLTVTPVLSYYLLPQAKATH HQDGRLLR LKWGA FLIRFSMR A  LL+LTW LVG SVWELS+LGADFLPKFDEGSVQINV+LPGGSSLKASNEASSLID+QLVK+QKS  NPNGP+LHFFRRTGRAE DEHAQPVNVGEYILTMNP++++ RDEFL+TLLSDL +NVPGVGIEAEQPLSHLISHMLSGVKAQVGIK+YGDDLDKLRELAG VRDAITDIPGVTPPIIDPQERVDELHVVLKP+ELA+FGLSREY+A+FV+TALKGEAVSQVL+GQRRFDLVIKL+E +RSDPYNLG LR++LPDGRGQ
Sbjct:  552 RLFVPLGVAYIVSILASLLVSLTVTPVLSYYLLPQAKATHEHQDGRLLRFLKWGAGFLIRFSMRHAAALLLLTWTLVGVSVWELSRLGADFLPKFDEGSVQINVTLPGGSSLKASNEASSLIDAQLVKMQKSKANPNGPILHFFRRTGRAERDEHAQPVNVGEYILTMNPEANYDRDEFLETLLSDLETNVPGVGIEAEQPLSHLISHMLSGVKAQVGIKIYGDDLDKLRELAGNVRDAITDIPGVTPPIIDPQERVDELHVVLKPEELAYFGLSREYVANFVRTALKGEAVSQVLEGQRRFDLVIKLDEPYRSDPYNLGALRLELPDGRGQ 883          
BLAST of mRNA_M-pyrifera_M_contig77930.18331.1 vs. uniprot
Match: A0A518AXZ3_9BACT (Nickel and cobalt resistance protein CnrA n=1 Tax=Planctomycetes bacterium Pan216 TaxID=2527975 RepID=A0A518AXZ3_9BACT)

HSP 1 Score: 552 bits (1422), Expect = 1.080e-185
Identity = 276/332 (83.13%), Postives = 310/332 (93.37%), Query Frame = 1
Query:    1 RLFIPLGIAYIVSILASLLVSLTVTPVLSYYLLPQAKATHAHQDGRLLRVLKWGASFLIRFSMRRAGILLVLTWALVGYSVWELSKLGADFLPKFDEGSVQINVSLPGGSSLKASNEASSLIDSQLVKLQKSAENPNGPVLHFFRRTGRAELDEHAQPVNVGEYILTMNPDSDHGRDEFLDTLLSDLRSNVPGVGIEAEQPLSHLISHMLSGVKAQVGIKLYGDDLDKLRELAGEVRDAITDIPGVTPPIIDPQERVDELHVVLKPDELAFFGLSREYIADFVQTALKGEAVSQVLDGQRRFDLVIKLNEEHRSDPYNLGELRIDLPDGRGQ 996
            RLF+PLG+AYIVSILASLLVSLTVTPVLSYYLLPQ+KATH H+DG LLRVLKW A FLIRFSMR AGILL+ TW LVG+SVW+L +LGADFLPKFDEGSVQINVSLPGGSSL+ASNEAS+LID+QL++LQ++ +NP+GPVLHFFRRTGRAELDEHAQPVNVGEYILTMNP+ D+ RDEFL TLL DLRSNVPGV IEAEQPLSHLISHMLSGVKAQ+GIKLYGDDLDKLR+LAG+VR+AI D+PGVTPPIIDPQ+RVDELHVVL+P +LAF+GLSREY+ADFVQTALKGEA+SQVL+GQRRFDLV+KL E +RSD Y LGELR+DLP  RGQ
Sbjct:  550 RLFVPLGVAYIVSILASLLVSLTVTPVLSYYLLPQSKATHRHEDGLLLRVLKWFAGFLIRFSMRWAGILLIATWLLVGFSVWQLMQLGADFLPKFDEGSVQINVSLPGGSSLQASNEASALIDAQLMELQRTPDNPHGPVLHFFRRTGRAELDEHAQPVNVGEYILTMNPEGDYDRDEFLKTLLDDLRSNVPGVQIEAEQPLSHLISHMLSGVKAQIGIKLYGDDLDKLRDLAGDVRNAIADVPGVTPPIIDPQDRVDELHVVLRPGDLAFYGLSREYVADFVQTALKGEAISQVLEGQRRFDLVVKLKEPYRSDAYKLGELRLDLPGRRGQ 881          
BLAST of mRNA_M-pyrifera_M_contig77930.18331.1 vs. uniprot
Match: UPI001421CAFF (efflux RND transporter permease subunit n=1 Tax=Rubinisphaera sp. JC658 TaxID=2713176 RepID=UPI001421CAFF)

HSP 1 Score: 550 bits (1417), Expect = 6.020e-185
Identity = 274/332 (82.53%), Postives = 312/332 (93.98%), Query Frame = 1
Query:    1 RLFIPLGIAYIVSILASLLVSLTVTPVLSYYLLPQAKATHAHQDGRLLRVLKWGASFLIRFSMRRAGILLVLTWALVGYSVWELSKLGADFLPKFDEGSVQINVSLPGGSSLKASNEASSLIDSQLVKLQKSAENPNGPVLHFFRRTGRAELDEHAQPVNVGEYILTMNPDSDHGRDEFLDTLLSDLRSNVPGVGIEAEQPLSHLISHMLSGVKAQVGIKLYGDDLDKLRELAGEVRDAITDIPGVTPPIIDPQERVDELHVVLKPDELAFFGLSREYIADFVQTALKGEAVSQVLDGQRRFDLVIKLNEEHRSDPYNLGELRIDLPDGRGQ 996
            RLF+PLG+AYIVSILASLLVSLTVTPVLSYYLLPQ +A+H H+DG LLR LKW A FLIRFSMR A +LL+LTWA+VG+SVW+L++LGADFLPKFDEGSVQ+NVSLPGGSSL+ASNEAS+LID++L KLQKS +NP+GPVLHFFRRTGRAELDEHAQPVNVGEYILTMN ++ + RDEF+D LL DLR+NVPGVGIEAEQPLSHLISHMLSGVKAQ+GIK+YGDDLDKLRELAG+VR+AI DIPGVTPPIIDPQERVDELHVVL+PD+L+F+GLSREY+ADFVQTALKGEAVSQVL+GQRRFDLV+KL+E   SDPYNL ELR++LPDGRGQ
Sbjct:  552 RLFVPLGVAYIVSILASLLVSLTVTPVLSYYLLPQTQASHEHKDGLLLRCLKWMAGFLIRFSMRHATMLLLLTWAIVGFSVWQLTQLGADFLPKFDEGSVQVNVSLPGGSSLQASNEASTLIDAELRKLQKSPDNPDGPVLHFFRRTGRAELDEHAQPVNVGEYILTMNSEAAYDRDEFIDQLLDDLRANVPGVGIEAEQPLSHLISHMLSGVKAQIGIKIYGDDLDKLRELAGDVRNAIQDIPGVTPPIIDPQERVDELHVVLRPDDLSFYGLSREYVADFVQTALKGEAVSQVLEGQRRFDLVVKLDEPFHSDPYNLRELRLELPDGRGQ 883          
BLAST of mRNA_M-pyrifera_M_contig77930.18331.1 vs. uniprot
Match: A0A518AS44_9BACT (Cobalt-zinc-cadmium resistance protein CzcA n=1 Tax=Aeoliella mucimassa TaxID=2527972 RepID=A0A518AS44_9BACT)

HSP 1 Score: 512 bits (1319), Expect = 2.390e-170
Identity = 257/332 (77.41%), Postives = 297/332 (89.46%), Query Frame = 1
Query:    1 RLFIPLGIAYIVSILASLLVSLTVTPVLSYYLLPQAKATHAHQDGRLLRVLKWGASFLIRFSMRRAGILLVLTWALVGYSVWELSKLGADFLPKFDEGSVQINVSLPGGSSLKASNEASSLIDSQLVKLQKSAENPNGPVLHFFRRTGRAELDEHAQPVNVGEYILTMNPDSDHGRDEFLDTLLSDLRSNVPGVGIEAEQPLSHLISHMLSGVKAQVGIKLYGDDLDKLRELAGEVRDAITDIPGVTPPIIDPQERVDELHVVLKPDELAFFGLSREYIADFVQTALKGEAVSQVLDGQRRFDLVIKLNEEHRSDPYNLGELRIDLPDGRGQ 996
            RLFIPLG+AYI SILASLLVSLTVTPVLSYYLLPQ++ATH HQDG LLRVLKWGAS+LIRFSMR AGILLV+TW LVG+S W+L++LGADFLPKFDEGSVQINV+LPGGSSLKASN+ +++ID QL+ +QKS ENP+GPVLHF RRTGRAELDEHAQPVNVGEYILTMNP S  GRDEFL  +++DLR+ VPGV I+AEQPLSHLISHMLSGV AQ+ IK +G DLDKLRELA E RDA+ +I GVTPPI+DPQ+RVDELHVVL+PD+L+ +GLSR Y+A+FVQTALKGEAVSQVL+GQRRFDLV++L E + SDP  L ELR+DLP G+GQ
Sbjct:  549 RLFIPLGLAYITSILASLLVSLTVTPVLSYYLLPQSRATHRHQDGLLLRVLKWGASYLIRFSMRYAGILLVVTWGLVGFSAWQLTQLGADFLPKFDEGSVQINVALPGGSSLKASNDVAAVIDRQLMAMQKSPENPDGPVLHFARRTGRAELDEHAQPVNVGEYILTMNPHSGIGRDEFLRQVIADLRNEVPGVEIDAEQPLSHLISHMLSGVNAQIAIKFFGPDLDKLRELAEEARDALVEIEGVTPPIVDPQQRVDELHVVLRPDDLSVYGLSRAYVAEFVQTALKGEAVSQVLEGQRRFDLVVRLQEPYHSDPEFLKELRLDLPSGQGQ 880          
BLAST of mRNA_M-pyrifera_M_contig77930.18331.1 vs. uniprot
Match: A0A4V0I8M7_9BACT (Uncharacterized protein n=1 Tax=Gemmataceae bacterium TaxID=2052164 RepID=A0A4V0I8M7_9BACT)

HSP 1 Score: 508 bits (1308), Expect = 1.090e-168
Identity = 253/332 (76.20%), Postives = 294/332 (88.55%), Query Frame = 1
Query:    1 RLFIPLGIAYIVSILASLLVSLTVTPVLSYYLLPQAKATHAHQDGRLLRVLKWGASFLIRFSMRRAGILLVLTWALVGYSVWELSKLGADFLPKFDEGSVQINVSLPGGSSLKASNEASSLIDSQLVKLQKSAENPNGPVLHFFRRTGRAELDEHAQPVNVGEYILTMNPDSDHGRDEFLDTLLSDLRSNVPGVGIEAEQPLSHLISHMLSGVKAQVGIKLYGDDLDKLRELAGEVRDAITDIPGVTPPIIDPQERVDELHVVLKPDELAFFGLSREYIADFVQTALKGEAVSQVLDGQRRFDLVIKLNEEHRSDPYNLGELRIDLPDGRGQ 996
            RLF+PLGIAYIVSILASL+VSLTVTPVLSYYL+P+   TH H+DG LLR LKW A F IRFSMRRAGILLVLTW  VG SVW+L++LGADFLPKFDEGSVQ+NV LPGGSSLKASNEA+ LID++L  ++KS ENPNGPV+HF RRTGRAELDEHA+PVNVGEYILTMNP++   RDEFL +LL+DLR+  PGV IE EQPLSHLISHMLSGV++Q+ I +YGDDLDKLRELAG++RD + ++PGVTPPIIDPQERVDE+HVVL+PD+LA  GLSRE++A+FVQ ALKGEAVS VL+GQRRFDLV+KL E +RSD Y LGELR+DLP+GRGQ
Sbjct:  552 RLFVPLGIAYIVSILASLVVSLTVTPVLSYYLMPKVGGTHGHRDGFLLRALKWVAGFFIRFSMRRAGILLVLTWVAVGVSVWQLTRLGADFLPKFDEGSVQVNVGLPGGSSLKASNEAAVLIDARLKTMRKSPENPNGPVVHFARRTGRAELDEHAEPVNVGEYILTMNPEAGVRRDEFLKSLLADLRAAAPGVEIETEQPLSHLISHMLSGVRSQIAIIIYGDDLDKLRELAGQIRDVVAEVPGVTPPIIDPQERVDEVHVVLRPDDLAHHGLSREFVAEFVQIALKGEAVSVVLEGQRRFDLVVKLKEPYRSDAYKLGELRLDLPNGRGQ 883          
BLAST of mRNA_M-pyrifera_M_contig77930.18331.1 vs. uniprot
Match: A0A518GNH2_9PLAN (Cobalt-zinc-cadmium resistance protein CzcA n=1 Tax=Planctopirus ephydatiae TaxID=2528019 RepID=A0A518GNH2_9PLAN)

HSP 1 Score: 501 bits (1290), Expect = 5.320e-166
Identity = 258/332 (77.71%), Postives = 291/332 (87.65%), Query Frame = 1
Query:    1 RLFIPLGIAYIVSILASLLVSLTVTPVLSYYLLPQAKATHAHQDGRLLRVLKWGASFLIRFSMRRAGILLVLTWALVGYSVWELSKLGADFLPKFDEGSVQINVSLPGGSSLKASNEASSLIDSQLVKLQKSAENPNGPVLHFFRRTGRAELDEHAQPVNVGEYILTMNPDSDHGRDEFLDTLLSDLRSNVPGVGIEAEQPLSHLISHMLSGVKAQVGIKLYGDDLDKLRELAGEVRDAITDIPGVTPPIIDPQERVDELHVVLKPDELAFFGLSREYIADFVQTALKGEAVSQVLDGQRRFDLVIKLNEEHRSDPYNLGELRIDLPDGRGQ 996
            RLF PLGIAYIVSILASL+VSLTVTPVLSYYLL  +   H H DG LL+VLKW A +LIRFSMR A +LL LTW  VG SVW+L++LGADFLPKFDEGSVQINV+LPGGSSLKASNEAS+LID++L+ +Q+S ENP+GPVLHF RRTGRAELDEHAQP+NVGEYILTMNP+S  GRD FL  LL+DLR+NVPGV IEAEQPLSHLISHMLSGV AQV IKL+GDDLDKLREL+ +V+DAI  +PGVTPPIIDPQERV+ELHVVL+ D+LAF GLSREY+ADFVQTALKGEAVS V++GQRRFDLV+KL E  RSD    GELR+DLPDGRGQ
Sbjct:  552 RLFAPLGIAYIVSILASLIVSLTVTPVLSYYLLAGSVTAHTHGDGWLLKVLKWVAGYLIRFSMRHALLLLSLTWLCVGLSVWQLTRLGADFLPKFDEGSVQINVALPGGSSLKASNEASALIDARLITMQQSPENPDGPVLHFARRTGRAELDEHAQPINVGEYILTMNPESGVGRDIFLKNLLADLRANVPGVEIEAEQPLSHLISHMLSGVNAQVAIKLFGDDLDKLRELSVQVKDAIVTVPGVTPPIIDPQERVNELHVVLRADDLAFHGLSREYVADFVQTALKGEAVSTVIEGQRRFDLVVKLKEPIRSDADKFGELRLDLPDGRGQ 883          
BLAST of mRNA_M-pyrifera_M_contig77930.18331.1 vs. uniprot
Match: A0A518KC61_9BACT (Nickel and cobalt resistance protein CnrA n=1 Tax=Botrimarina mediterranea TaxID=2528022 RepID=A0A518KC61_9BACT)

HSP 1 Score: 487 bits (1253), Expect = 1.530e-160
Identity = 246/332 (74.10%), Postives = 289/332 (87.05%), Query Frame = 1
Query:    1 RLFIPLGIAYIVSILASLLVSLTVTPVLSYYLLPQAKATHAHQDGRLLRVLKWGASFLIRFSMRRAGILLVLTWALVGYSVWELSKLGADFLPKFDEGSVQINVSLPGGSSLKASNEASSLIDSQLVKLQKSAENPNGPVLHFFRRTGRAELDEHAQPVNVGEYILTMNPDSDHGRDEFLDTLLSDLRSNVPGVGIEAEQPLSHLISHMLSGVKAQVGIKLYGDDLDKLRELAGEVRDAITDIPGVTPPIIDPQERVDELHVVLKPDELAFFGLSREYIADFVQTALKGEAVSQVLDGQRRFDLVIKLNEEHRSDPYNLGELRIDLPDGRGQ 996
            RLFIPLG+AYIVSILASLLVSLTVTPVLSYYLLP+++ATH   DG +LR LKWGA +LIRFSMR AG LL +TW LVG+SVW+L++LGADFLPKFDEGSVQINV+LPGGSSLKASN+ +++ID +L+ +QKS +NP GPVLHF RRTGRAELDEHAQPVNVGEYILTMNP+S  GRDEFL  ++ DLRS  PGV I+AEQPLSHLISHMLSGV AQV IK++G DLDKLR LA E RD ++ I GVTPPI+DPQ+RVDELHVVL+P +L+ +GLSR Y+A+FVQTALKGEAVS+VL+GQRRFDLV++L E + SDP  L ELR+DLP G+GQ
Sbjct:  549 RLFIPLGLAYIVSILASLLVSLTVTPVLSYYLLPKSQATHRQHDGAMLRALKWGACYLIRFSMRFAGPLLAITWLLVGFSVWQLTQLGADFLPKFDEGSVQINVALPGGSSLKASNDVAAVIDRRLIAMQKSPDNPEGPVLHFARRTGRAELDEHAQPVNVGEYILTMNPESGVGRDEFLRQVIVDLRSEAPGVEIDAEQPLSHLISHMLSGVNAQVAIKIFGADLDKLRMLAEEARDELSLIEGVTPPIVDPQQRVDELHVVLRPADLSVYGLSRAYVAEFVQTALKGEAVSRVLEGQRRFDLVVRLQEPYHSDPEFLKELRLDLPSGQGQ 880          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig77930.18331.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A517X2X5_9PLAN5.220e-20892.77Nickel and cobalt resistance protein CnrA n=2 Tax=... [more]
A0A3D3R9E7_9PLAN1.290e-20387.95CusA/CzcA family heavy metal efflux RND transporte... [more]
A0A518I9N4_9PLAN1.860e-19787.95Nickel and cobalt resistance protein CnrA n=11 Tax... [more]
A0A518AED4_9PLAN1.160e-19587.65Nickel and cobalt resistance protein CnrA n=17 Tax... [more]
A0A518AXZ3_9BACT1.080e-18583.13Nickel and cobalt resistance protein CnrA n=1 Tax=... [more]
UPI001421CAFF6.020e-18582.53efflux RND transporter permease subunit n=1 Tax=Ru... [more]
A0A518AS44_9BACT2.390e-17077.41Cobalt-zinc-cadmium resistance protein CzcA n=1 Ta... [more]
A0A4V0I8M7_9BACT1.090e-16876.20Uncharacterized protein n=1 Tax=Gemmataceae bacter... [more]
A0A518GNH2_9PLAN5.320e-16677.71Cobalt-zinc-cadmium resistance protein CzcA n=1 Ta... [more]
A0A518KC61_9BACT1.530e-16074.10Nickel and cobalt resistance protein CnrA n=1 Tax=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig77930contigM-pyrifera_M_contig77930:3..998 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score583.9
Seed ortholog evalue4.6e-164
Seed eggNOG ortholog344747.PM8797T_19330
Preferred nameczcA
KEGG koko:K07239,ko:K07787
KEGG TC2.A.6.1,2.A.6.1.4
KEGG Pathwayko02020,map02020
Hectar predicted targeting categorysignal peptide
EggNOG free text desc.Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
EggNOG OGs2IWZC@203682,COG3696@1,COG3696@2
COG Functional cat.P
Best tax levelPlanctomycetes
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko02000
Exons1
Model size996
Cds size996
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816680.7144518-CDS-M-pyrifera_M_contig77930:2..9981622816680.7144518-CDS-M-pyrifera_M_contig77930:2..998Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig77930 3..998 +
1692278115.9926307-CDS-M-pyrifera_M_contig77930:2..9981692278115.9926307-CDS-M-pyrifera_M_contig77930:2..998Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig77930 3..998 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig77930.18331.1prot_M-pyrifera_M_contig77930.18331.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig77930 3..998 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig77930.18331.1

>prot_M-pyrifera_M_contig77930.18331.1 ID=prot_M-pyrifera_M_contig77930.18331.1|Name=mRNA_M-pyrifera_M_contig77930.18331.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=332bp
RLFIPLGIAYIVSILASLLVSLTVTPVLSYYLLPQAKATHAHQDGRLLRV
LKWGASFLIRFSMRRAGILLVLTWALVGYSVWELSKLGADFLPKFDEGSV
QINVSLPGGSSLKASNEASSLIDSQLVKLQKSAENPNGPVLHFFRRTGRA
ELDEHAQPVNVGEYILTMNPDSDHGRDEFLDTLLSDLRSNVPGVGIEAEQ
PLSHLISHMLSGVKAQVGIKLYGDDLDKLRELAGEVRDAITDIPGVTPPI
IDPQERVDELHVVLKPDELAFFGLSREYIADFVQTALKGEAVSQVLDGQR
RFDLVIKLNEEHRSDPYNLGELRIDLPDGRGQ
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mRNA from alignment at M-pyrifera_M_contig77930:3..998+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig77930.18331.1 ID=mRNA_M-pyrifera_M_contig77930.18331.1|Name=mRNA_M-pyrifera_M_contig77930.18331.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=996bp|location=Sequence derived from alignment at M-pyrifera_M_contig77930:3..998+ (Macrocystis pyrifera P11B4 male)
CGCTTGTTTATCCCATTGGGAATTGCCTATATCGTTTCAATTCTGGCTTC TTTACTGGTCTCACTGACTGTCACACCGGTACTCTCTTACTACCTCCTGC CTCAAGCAAAGGCAACTCATGCCCATCAGGATGGGCGGTTACTACGAGTG CTGAAATGGGGAGCGAGTTTCCTGATTCGATTCAGTATGCGGCGGGCAGG CATCCTATTGGTTTTGACCTGGGCACTCGTTGGTTACAGTGTCTGGGAAT TGTCAAAGTTGGGAGCTGACTTTCTTCCCAAATTTGATGAGGGAAGCGTA CAAATCAATGTATCTTTACCTGGCGGATCGTCGCTGAAAGCATCCAACGA GGCATCCTCACTGATTGATTCGCAACTTGTCAAACTGCAGAAGTCTGCAG AAAATCCGAATGGTCCCGTATTGCACTTTTTTCGCAGGACAGGTCGAGCA GAGCTGGATGAACATGCTCAGCCAGTCAACGTGGGTGAATACATTTTGAC GATGAACCCAGACTCAGACCATGGTCGGGACGAGTTTCTGGATACGCTAC TCTCTGATTTGCGCTCAAATGTACCAGGGGTTGGGATTGAAGCGGAACAA CCCCTTTCTCACCTGATTAGCCATATGCTGTCCGGAGTGAAAGCCCAAGT CGGGATTAAGCTGTATGGAGACGACCTCGACAAGCTGCGCGAGTTGGCAG GAGAAGTTCGCGATGCGATCACTGATATACCTGGTGTGACACCTCCCATT ATCGACCCACAGGAACGGGTAGATGAGTTACATGTAGTCCTGAAACCTGA TGAGCTGGCTTTCTTTGGGCTGAGTCGGGAATACATAGCCGACTTCGTAC AGACTGCGTTGAAAGGCGAAGCAGTATCGCAAGTCTTAGATGGTCAGAGA CGTTTTGACCTTGTGATTAAACTCAACGAAGAGCATCGCTCAGATCCTTA TAATCTGGGTGAACTACGTATTGATCTTCCCGATGGGCGGGGGCAA
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig77930:3..998+

>mRNA_M-pyrifera_M_contig77930.18331.1 ID=mRNA_M-pyrifera_M_contig77930.18331.1|Name=mRNA_M-pyrifera_M_contig77930.18331.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1992bp|location=Sequence derived from alignment at M-pyrifera_M_contig77930:3..998+ (Macrocystis pyrifera P11B4 male)
CGCTTGTTTATCCCATTGGGAATTGCCTATATCGTTTCAATTCTGGCTTC
TTTACTGGTCTCACTGACTGTCACACCGGTACTCTCTTACTACCTCCTGC
CTCAAGCAAAGGCAACTCATGCCCATCAGGATGGGCGGTTACTACGAGTG
CTGAAATGGGGAGCGAGTTTCCTGATTCGATTCAGTATGCGGCGGGCAGG
CATCCTATTGGTTTTGACCTGGGCACTCGTTGGTTACAGTGTCTGGGAAT
TGTCAAAGTTGGGAGCTGACTTTCTTCCCAAATTTGATGAGGGAAGCGTA
CAAATCAATGTATCTTTACCTGGCGGATCGTCGCTGAAAGCATCCAACGA
GGCATCCTCACTGATTGATTCGCAACTTGTCAAACTGCAGAAGTCTGCAG
AAAATCCGAATGGTCCCGTATTGCACTTTTTTCGCAGGACAGGTCGAGCA
GAGCTGGATGAACATGCTCAGCCAGTCAACGTGGGTGAATACATTTTGAC
GATGAACCCAGACTCAGACCATGGTCGGGACGAGTTTCTGGATACGCTAC
TCTCTGATTTGCGCTCAAATGTACCAGGGGTTGGGATTGAAGCGGAACAA
CCCCTTTCTCACCTGATTAGCCATATGCTGTCCGGAGTGAAAGCCCAAGT
CGGGATTAAGCTGTATGGAGACGACCTCGACAAGCTGCGCGAGTTGGCAG
GAGAAGTTCGCGATGCGATCACTGATATACCTGGTGTGACACCTCCCATT
ATCGACCCACAGGAACGGGTAGATGAGTTACATGTAGTCCTGAAACCTGA
TGAGCTGGCTTTCTTTGGGCTGAGTCGGGAATACATAGCCGACTTCGTAC
AGACTGCGTTGAAAGGCGAAGCAGTATCGCAAGTCTTAGATGGTCAGAGA
CGTTTTGACCTTGTGATTAAACTCAACGAAGAGCATCGCTCAGATCCTTA
TAATCTGGGTGAACTACGTATTGATCTTCCCGATGGGCGGGGGCAACGCT
TGTTTATCCCATTGGGAATTGCCTATATCGTTTCAATTCTGGCTTCTTTA
CTGGTCTCACTGACTGTCACACCGGTACTCTCTTACTACCTCCTGCCTCA
AGCAAAGGCAACTCATGCCCATCAGGATGGGCGGTTACTACGAGTGCTGA
AATGGGGAGCGAGTTTCCTGATTCGATTCAGTATGCGGCGGGCAGGCATC
CTATTGGTTTTGACCTGGGCACTCGTTGGTTACAGTGTCTGGGAATTGTC
AAAGTTGGGAGCTGACTTTCTTCCCAAATTTGATGAGGGAAGCGTACAAA
TCAATGTATCTTTACCTGGCGGATCGTCGCTGAAAGCATCCAACGAGGCA
TCCTCACTGATTGATTCGCAACTTGTCAAACTGCAGAAGTCTGCAGAAAA
TCCGAATGGTCCCGTATTGCACTTTTTTCGCAGGACAGGTCGAGCAGAGC
TGGATGAACATGCTCAGCCAGTCAACGTGGGTGAATACATTTTGACGATG
AACCCAGACTCAGACCATGGTCGGGACGAGTTTCTGGATACGCTACTCTC
TGATTTGCGCTCAAATGTACCAGGGGTTGGGATTGAAGCGGAACAACCCC
TTTCTCACCTGATTAGCCATATGCTGTCCGGAGTGAAAGCCCAAGTCGGG
ATTAAGCTGTATGGAGACGACCTCGACAAGCTGCGCGAGTTGGCAGGAGA
AGTTCGCGATGCGATCACTGATATACCTGGTGTGACACCTCCCATTATCG
ACCCACAGGAACGGGTAGATGAGTTACATGTAGTCCTGAAACCTGATGAG
CTGGCTTTCTTTGGGCTGAGTCGGGAATACATAGCCGACTTCGTACAGAC
TGCGTTGAAAGGCGAAGCAGTATCGCAAGTCTTAGATGGTCAGAGACGTT
TTGACCTTGTGATTAAACTCAACGAAGAGCATCGCTCAGATCCTTATAAT
CTGGGTGAACTACGTATTGATCTTCCCGATGGGCGGGGGCAA
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