mRNA_M-pyrifera_M_contig77852.18310.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig77852.18310.1
Unique NamemRNA_M-pyrifera_M_contig77852.18310.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig77852.18310.1 vs. uniprot
Match: A0A8J2SFF3_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SFF3_9STRA)

HSP 1 Score: 125 bits (313), Expect = 1.340e-30
Identity = 92/280 (32.86%), Postives = 134/280 (47.86%), Query Frame = 1
Query:    4 GETPKRQMRDRNFTPLTILQINKALASAGSGGGDTIKIDGQEASRFRVCGYVVESAVAEVKARLVLEDGTGRMTFSKWLDSATDDGVLIAEQERARALFEAGRYIMASGELRAGSSGVNANIFEARPVTDFNEVTHHFMDAAFAHLVNTRGPPKDPSAPDALPTSAXXXXXXXXXXXXXXGIGAPAFNPMSTAATLSMPAAGXXXXXXAAAPGKVDVQQKVLEAFRSLGTGDDGASIPAVAAHLAKLGINEEQVRSSADNLSLQGHLYSTIDETHFKSTS 843
            GE  K+    +  TP+TI Q+  A    G G  D  KID  E    RV   V    V E KA   +EDGTG +  + WL+ A D+    A Q+ A+     G Y++  G ++     +  + ++ RPV DFN+VTHH+++A + H        K   +  A P +                     F+P     T    AAG        A G   +Q++VL+ +   GTGD+G +  +VA   A LG++  QV+++ + LS +GHLYSTIDE H KSTS
Sbjct:   32 GEKEKKPRDKQTLTPVTIKQLQSA--EKGVGDDDGYKIDNAEIHSVRVVACVQTDEVRETKATYNIEDGTGSVEVTFWLNDAQDEDSW-ARQKLAK--MTPGAYVVVHGNIKEYDGRLTISAYDMRPVEDFNQVTHHYLEAIYVHAKRVG---KIQVSSGAAPAAKRDSMA--------------GFHPT----THGQSAAGGADG----ADGMTSLQKRVLDYYTENGTGDEGCNTDSVA---ASLGLDLGQVKAAVEFLSSEGHLYSTIDEDHHKSTS 278          
BLAST of mRNA_M-pyrifera_M_contig77852.18310.1 vs. uniprot
Match: A0A7S2B4J1_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2B4J1_9STRA)

HSP 1 Score: 120 bits (300), Expect = 4.120e-29
Identity = 93/258 (36.05%), Postives = 136/258 (52.71%), Query Frame = 1
Query:   70 KALASAGSGGGDTIKIDGQEASRFRVCGYVVESAVAEVKARLVLEDGTGRMTFSKWLDSATDDGVLIAEQERARALFEAGRYIMASGELRAGSSGVNANIFEARPVTDFNEVTHHFMDAAFAHLVNTRGPPKDPSAPDALPTSAXXXXXXXXXXXXXXGIGAPAFNPMSTAATLSMPAAGXXXXXXAAAPGKVDVQQKVLEAFRSLGTGDDGASIPAVAAHLAKLGINEEQVRSSADNLSLQGHLYSTIDETHFKSTS 843
            +A +    G     K+DGQ+  + ++ G ++        A   +EDGTG +    W+D+   +    A+ E+ RAL   G Y+ A G LR      +  +++ RPVTD NE+THH ++A + HL NT+G      + +A     XXXXXXXXXXX   G  APA N   T    +M + G      +       VQ +VL  F + G+G++GASI      L   G +++ VR + + LS +GHLYSTID+ HFKSTS
Sbjct:    1 RASSDPDKGSDSNYKVDGQDIHQLKLVGNILSIEEHSTYAVYKIEDGTGVVDCKLWIDAGDSE----ADAEK-RALCRQGSYVRAVGVLRDFQGNASVQLYDMRPVTDHNEITHHMLEAIYVHLQNTKG------SKNAGQPXXXXXXXXXXXXXGVGGFNAPAVN---TNLNSAMASDGQGSGDFST------VQTEVLAYFTNNGSGEEGASINDAVKSLCANGHHDQAVRETVEFLSNEGHLYSTIDDEHFKSTS 238          
BLAST of mRNA_M-pyrifera_M_contig77852.18310.1 vs. uniprot
Match: A0A7S0J2L8_9EUKA (Hypothetical protein n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0J2L8_9EUKA)

HSP 1 Score: 121 bits (304), Expect = 5.710e-29
Identity = 91/280 (32.50%), Postives = 135/280 (48.21%), Query Frame = 1
Query:    1 SGETPKRQMRDR-NFTPLTILQINKALASAGSGGGDTIKIDGQEASRFRVCGYVVESAVAEVKARLVLEDGTGRMTFSKWLDSATDDGVLIAEQERARALFEAGRYIMASGELRAGSSGVNANIFEARPVTDFNEVTHHFMDAAFAHLVNTRGPPKDPSAPDALPTSAXXXXXXXXXXXXXXGIGAPAFNPMSTAATLSMPAAGXXXXXXAAAPGKVDVQQKVLEAFRSLGTGDDGASIPAVAAHLAKLGINEEQVRSSADNLSLQGHLYSTIDETHFKS 837
            +G   K + +DR +  P+TI Q+  A  SA   G  +  IDGQ+  +  + G ++ +  A    +  ++DGTG M   KW+DS  D G ++ +    RA+   G+ +   G+LR  +   +   F  +P+TDFNE T HF++   +HL +TRG P    A                      G  AP    ++  A        XXXXXXAAA     +   VL+ FR+ GT D G ++      +   G    Q+R   DNL+ +GHLYSTID+ HFKS
Sbjct:   67 AGPDGKARNKDRQSLIPVTIKQLKNAQGSAA--GDQSFTIDGQDLHQVTIVGVIMRAEEANTNLQYTIDDGTGDMDVKKWIDSEAD-GAMVEQ----RAMCREGKIVRVVGQLRTFNHTRSVVAFNIQPITDFNEYTFHFIECVHSHLRHTRGKPPAGGA----------------------GANAPMMGGVAGVAAGQQXXXXXXXXXXAAA-----LVDTVLQYFRNYGTSDLGCTVADCYEAMKASGTTMPQLREVVDNLAQEGHLYSTIDDDHFKS 312          
BLAST of mRNA_M-pyrifera_M_contig77852.18310.1 vs. uniprot
Match: F0YKH3_AURAN (Uncharacterized protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YKH3_AURAN)

HSP 1 Score: 116 bits (290), Expect = 1.330e-27
Identity = 85/274 (31.02%), Postives = 135/274 (49.27%), Query Frame = 1
Query:   28 RDR-NFTPLTILQINKALASAGSGGGDTIKIDGQEASRFRVCGYVVESAVAEVKARLVLEDGTGRMTFSKWLDSATDDGVLIAEQERARALFEAGRYIMASGELRAGSSGVNANIFEARPVTDFNEVTHHFMDAAFAHLVNTRGPPKDPSAPDALPTSAXXXXXXXXXXXXXXGIGAPAFNPMSTAATL-SMPAAGXXXXXXAAAPGKVDVQQKVLEAFRSLGTGDDGASIPAVAAHLAKLGINEEQVRSSADNLSLQGHLYSTIDETHFKSTS 843
            RD+ +  P+TI Q+  A  +AG    D   +DG+E ++ RV G ++     E K    +ED TG +  + W++   + G  +  +ERA  +   G Y+   G L+  +  +N + ++ RP+ DFNE+THH+++A ++H   T    K      A P SA                   AFNP     +  +M  +G          G    Q KV   + + GTGD+G ++ +VA+ LA   ++  QV+   + LS +GHLYSTID+ H KSTS
Sbjct:    2 RDKQSLIPMTIKQVLSATKAAGE--DDGFAVDGREVNQVRVVGNILRQDKKETKHVYTIEDQTGMLECTMWVNQE-EAGATV--EERAEKMVN-GSYVCVIGGLKEYNGKLNVSAYDVRPIEDFNEITHHYLEAIYSHAKQTNAI-KTGGGGAAAPASAFG-----------------AFNPSGGRVSADAMDTSGDG--------GMTADQTKVFNFYTTEGTGDEGCNVNSVASSLA---MDLNQVKHIVEFLSSEGHLYSTIDDDHHKSTS 240          
BLAST of mRNA_M-pyrifera_M_contig77852.18310.1 vs. uniprot
Match: A0A7S0HR69_9EUKA (Hypothetical protein n=2 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0HR69_9EUKA)

HSP 1 Score: 117 bits (293), Expect = 3.370e-27
Identity = 78/275 (28.36%), Postives = 124/275 (45.09%), Query Frame = 1
Query:   19 RQMRDRNFTPLTILQINKALASAGSGGGDTIKIDGQEASRFRVCGYVVESAVAEVKARLVLEDGTGRMTFSKWLDSATDDGVLIAEQERARALFEAGRYIMASGELRAGSSGVNANIFEARPVTDFNEVTHHFMDAAFAHLVNTRGPPKDPSAPDALPTSAXXXXXXXXXXXXXXGIGAPAFNPMSTAATLSMPAAGXXXXXXAAAPGKVDVQQKVLEAFRSLGTGDDGASIPAVAAHLAKLGINEEQVRSSADNLSLQGHLYSTIDETHFKSTS 843
            +Q+  ++  P TI Q+  A AS G  G     +DG++  +  + G +  +       +  ++DGT  +    W+D+ATD+  +       RA +  G  +   G++RA +   +   F  +P+TDFNE T HF++    HL NT+G   +  AP A    A              G  AP               AG       AA G    Q  V++ F S    D G +I      +A  G+ + QVR++ + L  +GHLYSTID+ H+K+T+
Sbjct:   84 KQLNKQSLAPCTIKQLKNAPASGGDNG---FSVDGKDLHQVTIVGLITHADEQNTNLQYTVDDGTDSINVKMWIDAATDEAAM-----EKRAQWREGAVVRVIGQMRAFNQVRSIVAFHIQPLTDFNEYTFHFIEVVHTHLRNTKGAAAEQGAPAA---GAGMAGASMGVAGGMAGGMAPQGG------------AGFAPQAGFAANGAASTQDTVMKYFTSYAETDIGCTISDCVNAMAPQGVTDAQVRTAVEALVNEGHLYSTIDDEHYKATA 335          
BLAST of mRNA_M-pyrifera_M_contig77852.18310.1 vs. uniprot
Match: L1IVT0_GUITC (Replication protein A2, 32kDa n=2 Tax=Guillardia theta TaxID=55529 RepID=L1IVT0_GUITC)

HSP 1 Score: 115 bits (288), Expect = 7.210e-27
Identity = 83/278 (29.86%), Postives = 131/278 (47.12%), Query Frame = 1
Query:   16 KRQMRDRNFTPLTILQINKALASAGSGGGDTIKIDGQEASRFRVCGYVVESAVAEVKARLVLEDGTGRMTFSKWLDSATDDGVLIAEQERARALFEAGRYIMASGELRAGSSGVNANIFEARPVTDFNEVTHHFMDAAFAHLVNTRGPPKDPSAPDALPTSAXXXXXXXXXXXXXXGIGAPAFNPMSTAATLSMPAAGXXXXXXAAAPGKV-DVQQKVLEAFRSLG-TGD-DGASIPAVAAHLAKL---GINEEQVRSSADNLSLQGHLYSTIDETHF 831
            K+   ++   P++I Q+  A   +     + IKIDG++  +  +  Y+V+           LEDGTG +    W+D    + ++     R+RA +  G Y+   G++R+ +   +   F  R VTDFNE+T+H  D   AHL NTRGP  D       P+S+                G P+  P  T+ +    A          A G V D+++ V +AF   G TGD  G SI      ++++    ++  +V S  +NL+L GH+YSTIDE HF
Sbjct:   28 KKSNAEKGMLPVSIKQVMNAPQDSQD---EDIKIDGRDTKQVTIIAYIVDVKETSTSVTFSLEDGTGNIDAIMWIDQDESEFMV-----RSRAEWVVGTYVRVVGQVRSHNGKRSMVAFHLRTVTDFNELTYHLFDTIHAHLYNTRGPLADSKPQTGFPSSSFQSP------------GKPSMGPGFTSPSQPGGAGAGRVDSSRPAGGPVTDMREAVHKAFIDFGATGDLTGLSIDNCVQQVSRVMGRSVSRAEVSSHIENLALDGHIYSTIDEEHF 285          
BLAST of mRNA_M-pyrifera_M_contig77852.18310.1 vs. uniprot
Match: A0A7S0WS52_9CHLO (Hypothetical protein n=1 Tax=Pyramimonas obovata TaxID=1411642 RepID=A0A7S0WS52_9CHLO)

HSP 1 Score: 112 bits (281), Expect = 7.450e-26
Identity = 81/280 (28.93%), Postives = 129/280 (46.07%), Query Frame = 1
Query:   28 RDRNFTPLTILQINKALASAGSGGGDTIKIDGQEASRFRVCGYVVESAVAEVKARLVLEDGTGRMTFSKWLDSATDDGVLIAEQERARALFEAGRYIMASGELRAGSSGVNANIFEARPVTDFNEVTHHFMDAAFAHLVNTRGPPKDPSAPDALPTSAXXXXXXXXXXXXXXGIGAPA-----FNPMSTAATLS-MPAAGXXXXXXAAAPGKVDVQQKVLEAFRS--LGTGDDGASIPAVAAHLAKLGINEEQVRSSADNLSLQGHLYSTIDETHFKSTS 843
            ++ + TPLT+ Q+++AL   G    +++ +DG +     + G VV++  +       L+DGTG++    WLD   D G     Q  + + +  G Y+   G LR   +  N   F+ RPV DFNEVT H ++A F H   T+                              G GAP      FNP + A   + +PA          + G    Q KV+ AF +    T + G S+ ++   L  +  ++EQ+R++ + L   GHLYSTID+ H+KST+
Sbjct:   42 KNESLTPLTVRQLHEALQ--GGNVDESLTVDGDDLHSLTLVGKVVDAQDSSTMLSYTLDDGTGKVEVRMWLDDEGDLG-----QSMSGSGYAKGTYVRVYGNLRTFQNQRNIVAFQIRPVVDFNEVTFHLLEAIFVHTKRTKA--------------------------MGMGAGAPTTPNVKFNPNAPANYQTPVPAYNGNSGANNNSNGMEACQDKVMRAFETPQAATNEAGLSVDSLVQELGSM-FSKEQIRTAVETLVNDGHLYSTIDDNHYKSTN 287          
BLAST of mRNA_M-pyrifera_M_contig77852.18310.1 vs. uniprot
Match: A0A7S3AZ16_9EUKA (Hypothetical protein n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3AZ16_9EUKA)

HSP 1 Score: 111 bits (277), Expect = 4.710e-25
Identity = 80/273 (29.30%), Postives = 129/273 (47.25%), Query Frame = 1
Query:   28 RDR-NFTPLTILQINKALASAGSGGGDTIKIDGQEASRFRVCGYVVESAVAEVKARLVLEDGTGRMTFSKWLDSATDDGVLIAEQERARALFEAGRYIMASGELRAGSSGVNANIFEARPVTDFNEVTHHFMDAAFAHLVNTRGPPKDPSAPDALPTSAXXXXXXXXXXXXXXGIGAPAFNPMSTAATLSMPAAGXXXXXXAAAPGKVDVQQKVLEAFRSLGTGDD-GASIPAVAAHLAKLGINEEQVRSSADNLSLQGHLYSTIDETHFKST 840
            RD+ +  P TI Q+  A+ +  S G  +  IDG +  +  + G +  +       +  ++DGT  +    W+D+  D+      QER RA ++ G  +   G+LRA ++  +   +  +P+T+FNE T HF+D    HL  T+G P     P  +                  G+G PA       A  ++P  G        AP   DV   VL  F++ G   D G +I  V   ++   I+E++VR + + L+ +GHLYSTID+ HFK+T
Sbjct:   68 RDKQSLIPATIKQLKNAVPA--SNGEASFMIDGADLHQITIVGLITSADEQATNLQYSVDDGTDHIMVKMWIDAEADESF----QER-RAQWKEGVVVRVIGQLRAFNNSKSVVAYSIQPITNFNEYTFHFIDVVHTHLKATKGKPVGVGVPRGI---------MGGFPMNGGGMGGPAMQQGMAQAAPNVPTGG--------AP--ADVNNLVLSFFKTKGEASDMGCTIGDVVGAVSAQNISEQRVREAVEFLTNEGHLYSTIDDDHFKAT 314          
BLAST of mRNA_M-pyrifera_M_contig77852.18310.1 vs. uniprot
Match: D8R9G7_SELML (Uncharacterized protein n=2 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8R9G7_SELML)

HSP 1 Score: 105 bits (262), Expect = 3.450e-23
Identity = 77/269 (28.62%), Postives = 124/269 (46.10%), Query Frame = 1
Query:   46 PLTILQINKALASAGSGGGDTIKIDGQEASRFRVCGYVVESAVAEVKARLVLEDGTGRMTFSKWLDSATDDGVLIAEQERARALFEAGRYIMASGELRAGSSGVNANIFEARPVTDFNEVTHHFMDAAFAHLVNTRGP-PKDPSAPDALPTSAXXXXXXXXXXXXXXGIGAPAFNPMSTAATLSMPAAGXXXXXXAAAPGKVDVQQKVLEAFR--SLGTGDDGASIPAVAAHLAKLGINEEQVRSSADNLSLQGHLYSTIDETHFKSTS 843
            PLT+ Q+++A+ SA     D + +DGQ  S   + G ++           +L+DGTGR+   +W++S      L           + G+Y+   G LR   +      F  +P+TDFNE+T HF+D  FAH  NT+      P  P + PT                    P  NP +T      PAA       A + G  + Q++V   F   S+   + G  +  +A  +   G +++QVR + + L  +G++YST+D+ HFKST+
Sbjct:   44 PLTVKQMSRAIQSATD---DNLIVDGQSMSNVTMVGMLLGKEERATDISFMLDDGTGRVEVKRWIESPDAPEALQLHS------IQHGQYVRIHGHLRTFQNKRTVVAFAVKPITDFNEITFHFLDCIFAHTYNTKSQGAARPDGPASPPT------------FNHTNYSNPVSNPYAT------PAA------PANSNGMSECQRRVQAVFEEPSVKESEQGLHVDEIARRIT--GFSKKQVRDAVEFLVNEGYVYSTVDDEHFKSTN 277          
BLAST of mRNA_M-pyrifera_M_contig77852.18310.1 vs. uniprot
Match: C1MT71_MICPC (Predicted protein n=1 Tax=Micromonas pusilla (strain CCMP1545) TaxID=564608 RepID=C1MT71_MICPC)

HSP 1 Score: 103 bits (257), Expect = 1.670e-22
Identity = 89/276 (32.25%), Postives = 130/276 (47.10%), Query Frame = 1
Query:   22 QMRDRNFTPLTILQINKALASAGSGGGDTIKIDGQEASRFRVCGYVVESAVAEVKARLVLEDGTGRMTFSKWLDSATDDGVLIAEQERARALFEAGRYIMASGELRA--GSSGVNANIFEARPVTDFNEVTHHFMDAAFAHLVNTRGPPKDPSAPDALPTSAXXXXXXXXXXXXXXGIGAPAFNPMSTAATLSMPAAGXXXXXXAAAPGKVDVQQKVLEAFRS-LGTGDDGASIPAVAAHLAKLGINEEQVRSSADNLSLQGHLYSTIDETHFKST 840
            Q R  +  PLT+ Q+ +++ ++     D  K++G+E     + G +V++  +       ++DGTG      W+D+   DG     Q + +A ++ G Y+   G LRA  G  GV A  F  RPVTDFNE+T+HF++  + +  N         A  A    A                 APA   M   +  + P+AGXXXXXX    G  + Q  V   F    G G+ G  +  V   L      E QVR S ++L  +GHLYSTID+ HFKST
Sbjct:   36 QGRAESLVPLTVKQLKESIDASNV--DDAFKVNGEEVHNLTLLGKIVKANDSSTSLMYTIDDGTGTCEVKIWVDADDADG-----QNQNKAEWKVGAYVRVYGHLRAFQGQRGVIA--FNMRPVTDFNEITYHFLEVVYCNSHN---------ASRAATAGA-----------------APATAAMGGDSAYAAPSAGXXXXXXXXXGGSANDQ--VFAIFNGPQGHGESGVRVDDVVTQLNGR-FTEAQVRESVEHLVNEGHLYSTIDDDHFKST 273          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig77852.18310.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A8J2SFF3_9STRA1.340e-3032.86Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A7S2B4J1_9STRA4.120e-2936.05Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A7S0J2L8_9EUKA5.710e-2932.50Hypothetical protein n=1 Tax=Calcidiscus leptoporu... [more]
F0YKH3_AURAN1.330e-2731.02Uncharacterized protein (Fragment) n=1 Tax=Aureoco... [more]
A0A7S0HR69_9EUKA3.370e-2728.36Hypothetical protein n=2 Tax=Phaeocystis antarctic... [more]
L1IVT0_GUITC7.210e-2729.86Replication protein A2, 32kDa n=2 Tax=Guillardia t... [more]
A0A7S0WS52_9CHLO7.450e-2628.93Hypothetical protein n=1 Tax=Pyramimonas obovata T... [more]
A0A7S3AZ16_9EUKA4.710e-2529.30Hypothetical protein n=1 Tax=Haptolina ericina Tax... [more]
D8R9G7_SELML3.450e-2328.62Uncharacterized protein n=2 Tax=Selaginella moelle... [more]
C1MT71_MICPC1.670e-2232.25Predicted protein n=1 Tax=Micromonas pusilla (stra... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig77852contigM-pyrifera_M_contig77852:1..849 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score114.0
Seed ortholog evalue1.1e-22
Seed eggNOG ortholog44056.XP_009040954.1
Preferred nameRPA2
KEGG rclassRC02795
KEGG koko:K02999,ko:K10739,ko:K10741
KEGG ReactionR00435,R00441,R00442,R00443
KEGG Pathwayko00230,ko00240,ko01100,ko03020,ko03030,ko03420,ko03430,ko03440,ko03460,map00230,map00240,map01100,map03020,map03030,map03420,map03430,map03440,map03460
KEGG ModuleM00182,M00288
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000018,GO:0000075,GO:0000076,GO:0000077,GO:0000082,GO:0000228,GO:0000278,GO:0000280,GO:0000722,GO:0000723,GO:0000724,GO:0000725,GO:0000731,GO:0000781,GO:0000785,GO:0000793,GO:0000794,GO:0003674,GO:0003676,GO:0003677,GO:0003684,GO:0003690,GO:0003697,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005657,GO:0005662,GO:0005694,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006265,GO:0006268,GO:0006269,GO:0006270,GO:0006278,GO:0006281,GO:0006282,GO:0006283,GO:0006284,GO:0006289,GO:0006293,GO:0006294,GO:0006296,GO:0006297,GO:0006298,GO:0006301,GO:0006302,GO:0006310,GO:0006312,GO:0006464,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0006996,GO:0007004,GO:0007049,GO:0007093,GO:0007127,GO:0007131,GO:0007346,GO:0008104,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009892,GO:0009987,GO:0010468,GO:0010564,GO:0010569,GO:0010605,GO:0010629,GO:0010833,GO:0010948,GO:0016043,GO:0016070,GO:0016458,GO:0016567,GO:0016604,GO:0016605,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0019538,GO:0019725,GO:0019899,GO:0019902,GO:0019903,GO:0019985,GO:0022402,GO:0022414,GO:0022607,GO:0030491,GO:0030894,GO:0031323,GO:0031334,GO:0031570,GO:0031571,GO:0031625,GO:0031974,GO:0031981,GO:0032200,GO:0032201,GO:0032392,GO:0032446,GO:0032508,GO:0032774,GO:0032991,GO:0032993,GO:0033036,GO:0033260,GO:0033365,GO:0033554,GO:0033683,GO:0034502,GO:0034613,GO:0034622,GO:0034641,GO:0034645,GO:0034654,GO:0035825,GO:0035861,GO:0036211,GO:0036297,GO:0042162,GO:0042276,GO:0042592,GO:0042769,GO:0043047,GO:0043085,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043254,GO:0043412,GO:0043565,GO:0043596,GO:0043601,GO:0043933,GO:0044085,GO:0044087,GO:0044089,GO:0044093,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044389,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044446,GO:0044451,GO:0044454,GO:0044464,GO:0044770,GO:0044772,GO:0044773,GO:0044774,GO:0044783,GO:0044786,GO:0044819,GO:0044843,GO:0045184,GO:0045786,GO:0045930,GO:0046483,GO:0047485,GO:0048285,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0050789,GO:0050790,GO:0050794,GO:0050896,GO:0051052,GO:0051095,GO:0051096,GO:0051128,GO:0051130,GO:0051171,GO:0051179,GO:0051234,GO:0051276,GO:0051321,GO:0051336,GO:0051345,GO:0051606,GO:0051641,GO:0051716,GO:0051726,GO:0060249,GO:0060255,GO:0061982,GO:0065003,GO:0065004,GO:0065007,GO:0065008,GO:0065009,GO:0070013,GO:0070647,GO:0070727,GO:0070987,GO:0071103,GO:0071704,GO:0071824,GO:0071840,GO:0071897,GO:0080090,GO:0080134,GO:0080135,GO:0090304,GO:0090305,GO:0090734,GO:0097159,GO:0098505,GO:0098687,GO:0098847,GO:0140013,GO:1900034,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901576,GO:1901976,GO:1901987,GO:1901988,GO:1901990,GO:1901991,GO:1902295,GO:1902318,GO:1902806,GO:1902807,GO:1902969,GO:1902981,GO:1903046,GO:1903047,GO:2000001,GO:2000045,GO:2000134,GO:2000779,GO:2001020
EggNOG free text desc.DNA metabolic process
EggNOG OGsCOG5235@1,KOG3108@2759
EC2.7.7.6
COG Functional cat.L
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEbr01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03032,ko03400
Exons1
Model size849
Cds size825
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816679.6382637-UTR-M-pyrifera_M_contig77852:0..241622816679.6382637-UTR-M-pyrifera_M_contig77852:0..24Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig77852 1..24 +
1692278115.3668988-UTR-M-pyrifera_M_contig77852:0..241692278115.3668988-UTR-M-pyrifera_M_contig77852:0..24Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig77852 1..24 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816679.6496623-CDS-M-pyrifera_M_contig77852:24..8491622816679.6496623-CDS-M-pyrifera_M_contig77852:24..849Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig77852 25..849 +
1692278115.3906562-CDS-M-pyrifera_M_contig77852:24..8491692278115.3906562-CDS-M-pyrifera_M_contig77852:24..849Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig77852 25..849 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig77852.18310.1prot_M-pyrifera_M_contig77852.18310.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig77852 25..849 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig77852.18310.1

>prot_M-pyrifera_M_contig77852.18310.1 ID=prot_M-pyrifera_M_contig77852.18310.1|Name=mRNA_M-pyrifera_M_contig77852.18310.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=275bp
MRDRNFTPLTILQINKALASAGSGGGDTIKIDGQEASRFRVCGYVVESAV
AEVKARLVLEDGTGRMTFSKWLDSATDDGVLIAEQERARALFEAGRYIMA
SGELRAGSSGVNANIFEARPVTDFNEVTHHFMDAAFAHLVNTRGPPKDPS
APDALPTSAAASASASCFSGGFGGIGAPAFNPMSTAATLSMPAAGPAAGA
SAAAPGKVDVQQKVLEAFRSLGTGDDGASIPAVAAHLAKLGINEEQVRSS
ADNLSLQGHLYSTIDETHFKSTSM*
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mRNA from alignment at M-pyrifera_M_contig77852:1..849+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig77852.18310.1 ID=mRNA_M-pyrifera_M_contig77852.18310.1|Name=mRNA_M-pyrifera_M_contig77852.18310.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=849bp|location=Sequence derived from alignment at M-pyrifera_M_contig77852:1..849+ (Macrocystis pyrifera P11B4 male)
AGCGGGGAGACACCCAAGAGGCAGATGCGCGACAGGAATTTCACTCCATT GACGATTCTGCAGATCAACAAAGCTTTGGCAAGTGCAGGAAGTGGAGGTG GTGATACAATCAAGATCGATGGACAAGAAGCATCACGATTTCGCGTCTGT GGGTATGTGGTCGAAAGCGCTGTCGCTGAAGTGAAAGCACGGCTGGTTTT AGAGGATGGCACTGGACGCATGACATTTTCCAAGTGGCTTGACTCTGCAA CAGATGATGGTGTACTGATTGCCGAACAGGAGAGAGCGAGAGCACTCTTT GAAGCTGGTAGGTACATAATGGCATCAGGTGAATTACGTGCTGGTTCTTC AGGCGTGAATGCAAACATCTTTGAAGCTCGCCCTGTCACTGATTTCAATG AAGTGACACACCACTTCATGGATGCAGCATTTGCACACTTGGTGAACACT AGAGGACCACCAAAAGATCCTTCAGCACCAGATGCTCTCCCAACCTCAGC CGCAGCTTCTGCATCAGCTTCGTGTTTTTCAGGAGGGTTTGGAGGCATTG GAGCACCTGCATTCAATCCAATGTCAACTGCAGCAACACTTTCCATGCCA GCAGCAGGTCCAGCAGCTGGAGCCTCTGCTGCTGCCCCTGGCAAAGTCGA TGTACAACAAAAAGTACTTGAAGCATTCCGTTCGCTTGGTACAGGAGATG ATGGTGCATCGATTCCTGCTGTAGCAGCACATCTTGCCAAACTTGGAATC AACGAGGAACAGGTCCGCTCTTCTGCAGATAACCTGTCACTCCAAGGACA TCTCTACTCCACAATTGACGAAACACACTTCAAATCGACATCCATGTGA
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig77852:1..849+

>mRNA_M-pyrifera_M_contig77852.18310.1 ID=mRNA_M-pyrifera_M_contig77852.18310.1|Name=mRNA_M-pyrifera_M_contig77852.18310.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1650bp|location=Sequence derived from alignment at M-pyrifera_M_contig77852:1..849+ (Macrocystis pyrifera P11B4 male)
ATGCGCGACAGGAATTTCACTCCATTGACGATTCTGCAGATCAACAAAGC
TTTGGCAAGTGCAGGAAGTGGAGGTGGTGATACAATCAAGATCGATGGAC
AAGAAGCATCACGATTTCGCGTCTGTGGGTATGTGGTCGAAAGCGCTGTC
GCTGAAGTGAAAGCACGGCTGGTTTTAGAGGATGGCACTGGACGCATGAC
ATTTTCCAAGTGGCTTGACTCTGCAACAGATGATGGTGTACTGATTGCCG
AACAGGAGAGAGCGAGAGCACTCTTTGAAGCTGGTAGGTACATAATGGCA
TCAGGTGAATTACGTGCTGGTTCTTCAGGCGTGAATGCAAACATCTTTGA
AGCTCGCCCTGTCACTGATTTCAATGAAGTGACACACCACTTCATGGATG
CAGCATTTGCACACTTGGTGAACACTAGAGGACCACCAAAAGATCCTTCA
GCACCAGATGCTCTCCCAACCTCAGCCGCAGCTTCTGCATCAGCTTCGTG
TTTTTCAGGAGGGTTTGGAGGCATTGGAGCACCTGCATTCAATCCAATGT
CAACTGCAGCAACACTTTCCATGCCAGCAGCAGGTCCAGCAGCTGGAGCC
TCTGCTGCTGCCCCTGGCAAAGTCGATGTACAACAAAAAGTACTTGAAGC
ATTCCGTTCGCTTGGTACAGGAGATGATGGTGCATCGATTCCTGCTGTAG
CAGCACATCTTGCCAAACTTGGAATCAACGAGGAACAGGTCCGCTCTTCT
GCAGATAACCTGTCACTCCAAGGACATCTCTACTCCACAATTGACGAAAC
ACACTTCAAATCGACATCCATGTGAATGCGCGACAGGAATTTCACTCCAT
TGACGATTCTGCAGATCAACAAAGCTTTGGCAAGTGCAGGAAGTGGAGGT
GGTGATACAATCAAGATCGATGGACAAGAAGCATCACGATTTCGCGTCTG
TGGGTATGTGGTCGAAAGCGCTGTCGCTGAAGTGAAAGCACGGCTGGTTT
TAGAGGATGGCACTGGACGCATGACATTTTCCAAGTGGCTTGACTCTGCA
ACAGATGATGGTGTACTGATTGCCGAACAGGAGAGAGCGAGAGCACTCTT
TGAAGCTGGTAGGTACATAATGGCATCAGGTGAATTACGTGCTGGTTCTT
CAGGCGTGAATGCAAACATCTTTGAAGCTCGCCCTGTCACTGATTTCAAT
GAAGTGACACACCACTTCATGGATGCAGCATTTGCACACTTGGTGAACAC
TAGAGGACCACCAAAAGATCCTTCAGCACCAGATGCTCTCCCAACCTCAG
CCGCAGCTTCTGCATCAGCTTCGTGTTTTTCAGGAGGGTTTGGAGGCATT
GGAGCACCTGCATTCAATCCAATGTCAACTGCAGCAACACTTTCCATGCC
AGCAGCAGGTCCAGCAGCTGGAGCCTCTGCTGCTGCCCCTGGCAAAGTCG
ATGTACAACAAAAAGTACTTGAAGCATTCCGTTCGCTTGGTACAGGAGAT
GATGGTGCATCGATTCCTGCTGTAGCAGCACATCTTGCCAAACTTGGAAT
CAACGAGGAACAGGTCCGCTCTTCTGCAGATAACCTGTCACTCCAAGGAC
ATCTCTACTCCACAATTGACGAAACACACTTCAAATCGACATCCATGTGA
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