mRNA_M-pyrifera_M_contig77852.18310.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig77852.18310.1 vs. uniprot
Match: A0A8J2SFF3_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SFF3_9STRA) HSP 1 Score: 125 bits (313), Expect = 1.340e-30 Identity = 92/280 (32.86%), Postives = 134/280 (47.86%), Query Frame = 1 Query: 4 GETPKRQMRDRNFTPLTILQINKALASAGSGGGDTIKIDGQEASRFRVCGYVVESAVAEVKARLVLEDGTGRMTFSKWLDSATDDGVLIAEQERARALFEAGRYIMASGELRAGSSGVNANIFEARPVTDFNEVTHHFMDAAFAHLVNTRGPPKDPSAPDALPTSAXXXXXXXXXXXXXXGIGAPAFNPMSTAATLSMPAAGXXXXXXAAAPGKVDVQQKVLEAFRSLGTGDDGASIPAVAAHLAKLGINEEQVRSSADNLSLQGHLYSTIDETHFKSTS 843 GE K+ + TP+TI Q+ A G G D KID E RV V V E KA +EDGTG + + WL+ A D+ A Q+ A+ G Y++ G ++ + + ++ RPV DFN+VTHH+++A + H K + A P + F+P T AAG A G +Q++VL+ + GTGD+G + +VA A LG++ QV+++ + LS +GHLYSTIDE H KSTS Sbjct: 32 GEKEKKPRDKQTLTPVTIKQLQSA--EKGVGDDDGYKIDNAEIHSVRVVACVQTDEVRETKATYNIEDGTGSVEVTFWLNDAQDEDSW-ARQKLAK--MTPGAYVVVHGNIKEYDGRLTISAYDMRPVEDFNQVTHHYLEAIYVHAKRVG---KIQVSSGAAPAAKRDSMA--------------GFHPT----THGQSAAGGADG----ADGMTSLQKRVLDYYTENGTGDEGCNTDSVA---ASLGLDLGQVKAAVEFLSSEGHLYSTIDEDHHKSTS 278
BLAST of mRNA_M-pyrifera_M_contig77852.18310.1 vs. uniprot
Match: A0A7S2B4J1_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2B4J1_9STRA) HSP 1 Score: 120 bits (300), Expect = 4.120e-29 Identity = 93/258 (36.05%), Postives = 136/258 (52.71%), Query Frame = 1 Query: 70 KALASAGSGGGDTIKIDGQEASRFRVCGYVVESAVAEVKARLVLEDGTGRMTFSKWLDSATDDGVLIAEQERARALFEAGRYIMASGELRAGSSGVNANIFEARPVTDFNEVTHHFMDAAFAHLVNTRGPPKDPSAPDALPTSAXXXXXXXXXXXXXXGIGAPAFNPMSTAATLSMPAAGXXXXXXAAAPGKVDVQQKVLEAFRSLGTGDDGASIPAVAAHLAKLGINEEQVRSSADNLSLQGHLYSTIDETHFKSTS 843 +A + G K+DGQ+ + ++ G ++ A +EDGTG + W+D+ + A+ E+ RAL G Y+ A G LR + +++ RPVTD NE+THH ++A + HL NT+G + +A XXXXXXXXXXX G APA N T +M + G + VQ +VL F + G+G++GASI L G +++ VR + + LS +GHLYSTID+ HFKSTS Sbjct: 1 RASSDPDKGSDSNYKVDGQDIHQLKLVGNILSIEEHSTYAVYKIEDGTGVVDCKLWIDAGDSE----ADAEK-RALCRQGSYVRAVGVLRDFQGNASVQLYDMRPVTDHNEITHHMLEAIYVHLQNTKG------SKNAGQPXXXXXXXXXXXXXGVGGFNAPAVN---TNLNSAMASDGQGSGDFST------VQTEVLAYFTNNGSGEEGASINDAVKSLCANGHHDQAVRETVEFLSNEGHLYSTIDDEHFKSTS 238
BLAST of mRNA_M-pyrifera_M_contig77852.18310.1 vs. uniprot
Match: A0A7S0J2L8_9EUKA (Hypothetical protein n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0J2L8_9EUKA) HSP 1 Score: 121 bits (304), Expect = 5.710e-29 Identity = 91/280 (32.50%), Postives = 135/280 (48.21%), Query Frame = 1 Query: 1 SGETPKRQMRDR-NFTPLTILQINKALASAGSGGGDTIKIDGQEASRFRVCGYVVESAVAEVKARLVLEDGTGRMTFSKWLDSATDDGVLIAEQERARALFEAGRYIMASGELRAGSSGVNANIFEARPVTDFNEVTHHFMDAAFAHLVNTRGPPKDPSAPDALPTSAXXXXXXXXXXXXXXGIGAPAFNPMSTAATLSMPAAGXXXXXXAAAPGKVDVQQKVLEAFRSLGTGDDGASIPAVAAHLAKLGINEEQVRSSADNLSLQGHLYSTIDETHFKS 837 +G K + +DR + P+TI Q+ A SA G + IDGQ+ + + G ++ + A + ++DGTG M KW+DS D G ++ + RA+ G+ + G+LR + + F +P+TDFNE T HF++ +HL +TRG P A G AP ++ A XXXXXXAAA + VL+ FR+ GT D G ++ + G Q+R DNL+ +GHLYSTID+ HFKS Sbjct: 67 AGPDGKARNKDRQSLIPVTIKQLKNAQGSAA--GDQSFTIDGQDLHQVTIVGVIMRAEEANTNLQYTIDDGTGDMDVKKWIDSEAD-GAMVEQ----RAMCREGKIVRVVGQLRTFNHTRSVVAFNIQPITDFNEYTFHFIECVHSHLRHTRGKPPAGGA----------------------GANAPMMGGVAGVAAGQQXXXXXXXXXXAAA-----LVDTVLQYFRNYGTSDLGCTVADCYEAMKASGTTMPQLREVVDNLAQEGHLYSTIDDDHFKS 312
BLAST of mRNA_M-pyrifera_M_contig77852.18310.1 vs. uniprot
Match: F0YKH3_AURAN (Uncharacterized protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YKH3_AURAN) HSP 1 Score: 116 bits (290), Expect = 1.330e-27 Identity = 85/274 (31.02%), Postives = 135/274 (49.27%), Query Frame = 1 Query: 28 RDR-NFTPLTILQINKALASAGSGGGDTIKIDGQEASRFRVCGYVVESAVAEVKARLVLEDGTGRMTFSKWLDSATDDGVLIAEQERARALFEAGRYIMASGELRAGSSGVNANIFEARPVTDFNEVTHHFMDAAFAHLVNTRGPPKDPSAPDALPTSAXXXXXXXXXXXXXXGIGAPAFNPMSTAATL-SMPAAGXXXXXXAAAPGKVDVQQKVLEAFRSLGTGDDGASIPAVAAHLAKLGINEEQVRSSADNLSLQGHLYSTIDETHFKSTS 843 RD+ + P+TI Q+ A +AG D +DG+E ++ RV G ++ E K +ED TG + + W++ + G + +ERA + G Y+ G L+ + +N + ++ RP+ DFNE+THH+++A ++H T K A P SA AFNP + +M +G G Q KV + + GTGD+G ++ +VA+ LA ++ QV+ + LS +GHLYSTID+ H KSTS Sbjct: 2 RDKQSLIPMTIKQVLSATKAAGE--DDGFAVDGREVNQVRVVGNILRQDKKETKHVYTIEDQTGMLECTMWVNQE-EAGATV--EERAEKMVN-GSYVCVIGGLKEYNGKLNVSAYDVRPIEDFNEITHHYLEAIYSHAKQTNAI-KTGGGGAAAPASAFG-----------------AFNPSGGRVSADAMDTSGDG--------GMTADQTKVFNFYTTEGTGDEGCNVNSVASSLA---MDLNQVKHIVEFLSSEGHLYSTIDDDHHKSTS 240
BLAST of mRNA_M-pyrifera_M_contig77852.18310.1 vs. uniprot
Match: A0A7S0HR69_9EUKA (Hypothetical protein n=2 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0HR69_9EUKA) HSP 1 Score: 117 bits (293), Expect = 3.370e-27 Identity = 78/275 (28.36%), Postives = 124/275 (45.09%), Query Frame = 1 Query: 19 RQMRDRNFTPLTILQINKALASAGSGGGDTIKIDGQEASRFRVCGYVVESAVAEVKARLVLEDGTGRMTFSKWLDSATDDGVLIAEQERARALFEAGRYIMASGELRAGSSGVNANIFEARPVTDFNEVTHHFMDAAFAHLVNTRGPPKDPSAPDALPTSAXXXXXXXXXXXXXXGIGAPAFNPMSTAATLSMPAAGXXXXXXAAAPGKVDVQQKVLEAFRSLGTGDDGASIPAVAAHLAKLGINEEQVRSSADNLSLQGHLYSTIDETHFKSTS 843 +Q+ ++ P TI Q+ A AS G G +DG++ + + G + + + ++DGT + W+D+ATD+ + RA + G + G++RA + + F +P+TDFNE T HF++ HL NT+G + AP A A G AP AG AA G Q V++ F S D G +I +A G+ + QVR++ + L +GHLYSTID+ H+K+T+ Sbjct: 84 KQLNKQSLAPCTIKQLKNAPASGGDNG---FSVDGKDLHQVTIVGLITHADEQNTNLQYTVDDGTDSINVKMWIDAATDEAAM-----EKRAQWREGAVVRVIGQMRAFNQVRSIVAFHIQPLTDFNEYTFHFIEVVHTHLRNTKGAAAEQGAPAA---GAGMAGASMGVAGGMAGGMAPQGG------------AGFAPQAGFAANGAASTQDTVMKYFTSYAETDIGCTISDCVNAMAPQGVTDAQVRTAVEALVNEGHLYSTIDDEHYKATA 335
BLAST of mRNA_M-pyrifera_M_contig77852.18310.1 vs. uniprot
Match: L1IVT0_GUITC (Replication protein A2, 32kDa n=2 Tax=Guillardia theta TaxID=55529 RepID=L1IVT0_GUITC) HSP 1 Score: 115 bits (288), Expect = 7.210e-27 Identity = 83/278 (29.86%), Postives = 131/278 (47.12%), Query Frame = 1 Query: 16 KRQMRDRNFTPLTILQINKALASAGSGGGDTIKIDGQEASRFRVCGYVVESAVAEVKARLVLEDGTGRMTFSKWLDSATDDGVLIAEQERARALFEAGRYIMASGELRAGSSGVNANIFEARPVTDFNEVTHHFMDAAFAHLVNTRGPPKDPSAPDALPTSAXXXXXXXXXXXXXXGIGAPAFNPMSTAATLSMPAAGXXXXXXAAAPGKV-DVQQKVLEAFRSLG-TGD-DGASIPAVAAHLAKL---GINEEQVRSSADNLSLQGHLYSTIDETHF 831 K+ ++ P++I Q+ A + + IKIDG++ + + Y+V+ LEDGTG + W+D + ++ R+RA + G Y+ G++R+ + + F R VTDFNE+T+H D AHL NTRGP D P+S+ G P+ P T+ + A A G V D+++ V +AF G TGD G SI ++++ ++ +V S +NL+L GH+YSTIDE HF Sbjct: 28 KKSNAEKGMLPVSIKQVMNAPQDSQD---EDIKIDGRDTKQVTIIAYIVDVKETSTSVTFSLEDGTGNIDAIMWIDQDESEFMV-----RSRAEWVVGTYVRVVGQVRSHNGKRSMVAFHLRTVTDFNELTYHLFDTIHAHLYNTRGPLADSKPQTGFPSSSFQSP------------GKPSMGPGFTSPSQPGGAGAGRVDSSRPAGGPVTDMREAVHKAFIDFGATGDLTGLSIDNCVQQVSRVMGRSVSRAEVSSHIENLALDGHIYSTIDEEHF 285
BLAST of mRNA_M-pyrifera_M_contig77852.18310.1 vs. uniprot
Match: A0A7S0WS52_9CHLO (Hypothetical protein n=1 Tax=Pyramimonas obovata TaxID=1411642 RepID=A0A7S0WS52_9CHLO) HSP 1 Score: 112 bits (281), Expect = 7.450e-26 Identity = 81/280 (28.93%), Postives = 129/280 (46.07%), Query Frame = 1 Query: 28 RDRNFTPLTILQINKALASAGSGGGDTIKIDGQEASRFRVCGYVVESAVAEVKARLVLEDGTGRMTFSKWLDSATDDGVLIAEQERARALFEAGRYIMASGELRAGSSGVNANIFEARPVTDFNEVTHHFMDAAFAHLVNTRGPPKDPSAPDALPTSAXXXXXXXXXXXXXXGIGAPA-----FNPMSTAATLS-MPAAGXXXXXXAAAPGKVDVQQKVLEAFRS--LGTGDDGASIPAVAAHLAKLGINEEQVRSSADNLSLQGHLYSTIDETHFKSTS 843 ++ + TPLT+ Q+++AL G +++ +DG + + G VV++ + L+DGTG++ WLD D G Q + + + G Y+ G LR + N F+ RPV DFNEVT H ++A F H T+ G GAP FNP + A + +PA + G Q KV+ AF + T + G S+ ++ L + ++EQ+R++ + L GHLYSTID+ H+KST+ Sbjct: 42 KNESLTPLTVRQLHEALQ--GGNVDESLTVDGDDLHSLTLVGKVVDAQDSSTMLSYTLDDGTGKVEVRMWLDDEGDLG-----QSMSGSGYAKGTYVRVYGNLRTFQNQRNIVAFQIRPVVDFNEVTFHLLEAIFVHTKRTKA--------------------------MGMGAGAPTTPNVKFNPNAPANYQTPVPAYNGNSGANNNSNGMEACQDKVMRAFETPQAATNEAGLSVDSLVQELGSM-FSKEQIRTAVETLVNDGHLYSTIDDNHYKSTN 287
BLAST of mRNA_M-pyrifera_M_contig77852.18310.1 vs. uniprot
Match: A0A7S3AZ16_9EUKA (Hypothetical protein n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3AZ16_9EUKA) HSP 1 Score: 111 bits (277), Expect = 4.710e-25 Identity = 80/273 (29.30%), Postives = 129/273 (47.25%), Query Frame = 1 Query: 28 RDR-NFTPLTILQINKALASAGSGGGDTIKIDGQEASRFRVCGYVVESAVAEVKARLVLEDGTGRMTFSKWLDSATDDGVLIAEQERARALFEAGRYIMASGELRAGSSGVNANIFEARPVTDFNEVTHHFMDAAFAHLVNTRGPPKDPSAPDALPTSAXXXXXXXXXXXXXXGIGAPAFNPMSTAATLSMPAAGXXXXXXAAAPGKVDVQQKVLEAFRSLGTGDD-GASIPAVAAHLAKLGINEEQVRSSADNLSLQGHLYSTIDETHFKST 840 RD+ + P TI Q+ A+ + S G + IDG + + + G + + + ++DGT + W+D+ D+ QER RA ++ G + G+LRA ++ + + +P+T+FNE T HF+D HL T+G P P + G+G PA A ++P G AP DV VL F++ G D G +I V ++ I+E++VR + + L+ +GHLYSTID+ HFK+T Sbjct: 68 RDKQSLIPATIKQLKNAVPA--SNGEASFMIDGADLHQITIVGLITSADEQATNLQYSVDDGTDHIMVKMWIDAEADESF----QER-RAQWKEGVVVRVIGQLRAFNNSKSVVAYSIQPITNFNEYTFHFIDVVHTHLKATKGKPVGVGVPRGI---------MGGFPMNGGGMGGPAMQQGMAQAAPNVPTGG--------AP--ADVNNLVLSFFKTKGEASDMGCTIGDVVGAVSAQNISEQRVREAVEFLTNEGHLYSTIDDDHFKAT 314
BLAST of mRNA_M-pyrifera_M_contig77852.18310.1 vs. uniprot
Match: D8R9G7_SELML (Uncharacterized protein n=2 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8R9G7_SELML) HSP 1 Score: 105 bits (262), Expect = 3.450e-23 Identity = 77/269 (28.62%), Postives = 124/269 (46.10%), Query Frame = 1 Query: 46 PLTILQINKALASAGSGGGDTIKIDGQEASRFRVCGYVVESAVAEVKARLVLEDGTGRMTFSKWLDSATDDGVLIAEQERARALFEAGRYIMASGELRAGSSGVNANIFEARPVTDFNEVTHHFMDAAFAHLVNTRGP-PKDPSAPDALPTSAXXXXXXXXXXXXXXGIGAPAFNPMSTAATLSMPAAGXXXXXXAAAPGKVDVQQKVLEAFR--SLGTGDDGASIPAVAAHLAKLGINEEQVRSSADNLSLQGHLYSTIDETHFKSTS 843 PLT+ Q+++A+ SA D + +DGQ S + G ++ +L+DGTGR+ +W++S L + G+Y+ G LR + F +P+TDFNE+T HF+D FAH NT+ P P + PT P NP +T PAA A + G + Q++V F S+ + G + +A + G +++QVR + + L +G++YST+D+ HFKST+ Sbjct: 44 PLTVKQMSRAIQSATD---DNLIVDGQSMSNVTMVGMLLGKEERATDISFMLDDGTGRVEVKRWIESPDAPEALQLHS------IQHGQYVRIHGHLRTFQNKRTVVAFAVKPITDFNEITFHFLDCIFAHTYNTKSQGAARPDGPASPPT------------FNHTNYSNPVSNPYAT------PAA------PANSNGMSECQRRVQAVFEEPSVKESEQGLHVDEIARRIT--GFSKKQVRDAVEFLVNEGYVYSTVDDEHFKSTN 277
BLAST of mRNA_M-pyrifera_M_contig77852.18310.1 vs. uniprot
Match: C1MT71_MICPC (Predicted protein n=1 Tax=Micromonas pusilla (strain CCMP1545) TaxID=564608 RepID=C1MT71_MICPC) HSP 1 Score: 103 bits (257), Expect = 1.670e-22 Identity = 89/276 (32.25%), Postives = 130/276 (47.10%), Query Frame = 1 Query: 22 QMRDRNFTPLTILQINKALASAGSGGGDTIKIDGQEASRFRVCGYVVESAVAEVKARLVLEDGTGRMTFSKWLDSATDDGVLIAEQERARALFEAGRYIMASGELRA--GSSGVNANIFEARPVTDFNEVTHHFMDAAFAHLVNTRGPPKDPSAPDALPTSAXXXXXXXXXXXXXXGIGAPAFNPMSTAATLSMPAAGXXXXXXAAAPGKVDVQQKVLEAFRS-LGTGDDGASIPAVAAHLAKLGINEEQVRSSADNLSLQGHLYSTIDETHFKST 840 Q R + PLT+ Q+ +++ ++ D K++G+E + G +V++ + ++DGTG W+D+ DG Q + +A ++ G Y+ G LRA G GV A F RPVTDFNE+T+HF++ + + N A A A APA M + + P+AGXXXXXX G + Q V F G G+ G + V L E QVR S ++L +GHLYSTID+ HFKST Sbjct: 36 QGRAESLVPLTVKQLKESIDASNV--DDAFKVNGEEVHNLTLLGKIVKANDSSTSLMYTIDDGTGTCEVKIWVDADDADG-----QNQNKAEWKVGAYVRVYGHLRAFQGQRGVIA--FNMRPVTDFNEITYHFLEVVYCNSHN---------ASRAATAGA-----------------APATAAMGGDSAYAAPSAGXXXXXXXXXGGSANDQ--VFAIFNGPQGHGESGVRVDDVVTQLNGR-FTEAQVRESVEHLVNEGHLYSTIDDDHFKST 273 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig77852.18310.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig77852.18310.1 >prot_M-pyrifera_M_contig77852.18310.1 ID=prot_M-pyrifera_M_contig77852.18310.1|Name=mRNA_M-pyrifera_M_contig77852.18310.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=275bp MRDRNFTPLTILQINKALASAGSGGGDTIKIDGQEASRFRVCGYVVESAVback to top mRNA from alignment at M-pyrifera_M_contig77852:1..849+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig77852.18310.1 ID=mRNA_M-pyrifera_M_contig77852.18310.1|Name=mRNA_M-pyrifera_M_contig77852.18310.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=849bp|location=Sequence derived from alignment at M-pyrifera_M_contig77852:1..849+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig77852:1..849+ >mRNA_M-pyrifera_M_contig77852.18310.1 ID=mRNA_M-pyrifera_M_contig77852.18310.1|Name=mRNA_M-pyrifera_M_contig77852.18310.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1650bp|location=Sequence derived from alignment at M-pyrifera_M_contig77852:1..849+ (Macrocystis pyrifera P11B4 male)back to top |