mRNA_M-pyrifera_M_contig7782.18307.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig7782.18307.1
Unique NamemRNA_M-pyrifera_M_contig7782.18307.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig7782.18307.1 vs. uniprot
Match: A0A6H5JCH2_9PHAE (Cyclic nucleotide-binding domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JCH2_9PHAE)

HSP 1 Score: 380 bits (975), Expect = 1.310e-125
Identity = 186/202 (92.08%), Postives = 189/202 (93.56%), Query Frame = 1
Query:    1 DVTFEDRPIQRFWFLETVARMPYFSYLSMLFFYETLGWWSGGAEVRKVHFAEEYNEMQHLRIMESLGGDTLWSDRFLARHAAIVYFWVLTLGYIVSPFLAYNFSELIESHAVDTYTEFAEVNKELLQSLPPTPQALAYYHGGDMYLFDEFQTSRPAFSRRPLIKNLYDVFRSIRDDELEHVKTMFACERGKGALTSPNAAAA 606
            DV FEDRPIQRFWFLETVARMPYFSYLSMLF YETLGWWSG AEVRKVHFAEEYNEMQHLRIMESLGGDT WSDRFLARHAAI+YF+VL LGY+VSPFLAYNFSELIESHAVDTYTEFAE NKELLQSLPPTPQAL YYHGGDMYLFDEFQTSRPAFSRRP IKNLYDVF  IRDDELEHVKTMFACERG G L SPNAAAA
Sbjct:  413 DVVFEDRPIQRFWFLETVARMPYFSYLSMLFLYETLGWWSGAAEVRKVHFAEEYNEMQHLRIMESLGGDTRWSDRFLARHAAIIYFFVLILGYLVSPFLAYNFSELIESHAVDTYTEFAEANKELLQSLPPTPQALDYYHGGDMYLFDEFQTSRPAFSRRPRIKNLYDVFSCIRDDELEHVKTMFACERGTGTLPSPNAAAA 614          
BLAST of mRNA_M-pyrifera_M_contig7782.18307.1 vs. uniprot
Match: A0A7S1KCS9_9ALVE (Hypothetical protein n=1 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A7S1KCS9_9ALVE)

HSP 1 Score: 295 bits (756), Expect = 4.180e-97
Identity = 144/202 (71.29%), Postives = 165/202 (81.68%), Query Frame = 1
Query:    1 DVTFEDRPIQRFWFLETVARMPYFSYLSMLFFYETLGWWSGGAEVRKVHFAEEYNEMQHLRIMESLGGDTLWSDRFLARHAAIVYFWVLTLGYIVSPFLAYNFSELIESHAVDTYTEFAEVNKELLQSLPPTPQALAYYHGGDMYLFDEFQTSRPAFSRRPLIKNLYDVFRSIRDDELEHVKTMFACERGKGALTSPNAAAA 606
            DV + +RPIQRFWFLETVARMPYF+Y+SML  YETLGWW  G EVR+VHFAEE+NEM HL IMESLGGD  W DRFLARHAAIVY+WV+   +++SP  AYNFSEL+E HA DTY EF E NK+ L+ LP    AL YY+GGD+YLFDEFQ+SRPA SRRP I NLYDVF +IRDDELEHVKTM AC+R + A+ SPNAAAA
Sbjct:  153 DVLYNERPIQRFWFLETVARMPYFAYISMLHLYETLGWWRVGVEVRRVHFAEEWNEMHHLFIMESLGGDQAWFDRFLARHAAIVYYWVVIFLFLISPTWAYNFSELVEWHATDTYAEFVEQNKDRLKRLPAPAVALEYYNGGDLYLFDEFQSSRPAESRRPNIDNLYDVFVTIRDDELEHVKTMSACQRLESAMKSPNAAAA 354          
BLAST of mRNA_M-pyrifera_M_contig7782.18307.1 vs. uniprot
Match: A0A835YR99_9STRA (Alternative oxidase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YR99_9STRA)

HSP 1 Score: 303 bits (777), Expect = 1.280e-96
Identity = 151/220 (68.64%), Postives = 171/220 (77.73%), Query Frame = 1
Query:    1 DVTFEDRPIQRFWFLETVARMPYFSYLSMLFFYETLGWWSGGAEVRKVHFAEEYNEMQHLRIMESLGGDTLWSDRFLARHAAIVYFWVLTLGYIVSPFLAYNFSELIESHAVDTYTEFAEVNKELLQSLPPTPQA------------------LAYYHGGDMYLFDEFQTSRPAFSRRPLIKNLYDVFRSIRDDELEHVKTMFACERGKGALTSPNAAAA 606
            D  FE RPIQRFWFLE+VARMPYFSYLSML  YETLGWWS G EVR+VHF+EE+NEM HL+IME+LGGD  WSDRFLARHAAIVY+W L + ++ SPFLAYNFS+LIESHAVDTY EF E NKELLQSLPP P+A                  +AYY GGDMY+FDEFQ+  PAF+RRP+I +LYDVF +IRDDE EHVKTMFACER    + SPN  AA
Sbjct:  345 DFVFEGRPIQRFWFLESVARMPYFSYLSMLHLYETLGWWSVGTEVRRVHFSEEWNEMNHLKIMEALGGDMRWSDRFLARHAAIVYYWALNILFLFSPFLAYNFSKLIESHAVDTYGEFVETNKELLQSLPPPPEAXXXXXXXXXXXXXXXXXAVAYYVGGDMYMFDEFQSGTPAFTRRPVINSLYDVFCNIRDDEREHVKTMFACEREGELVRSPNELAA 564          
BLAST of mRNA_M-pyrifera_M_contig7782.18307.1 vs. uniprot
Match: A0A1Y1HI87_KLENI (Ubiquinol oxidase n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1HI87_KLENI)

HSP 1 Score: 293 bits (750), Expect = 3.620e-94
Identity = 140/198 (70.71%), Postives = 158/198 (79.80%), Query Frame = 1
Query:    1 DVTFEDRPIQRFWFLETVARMPYFSYLSMLFFYETLGWWSGGAEVRKVHFAEEYNEMQHLRIMESLGGDTLWSDRFLARHAAIVYFWVLTLGYIVSPFLAYNFSELIESHAVDTYTEFAEVNKELLQSLPPTPQALAYYHGGDMYLFDEFQTSRPAFSRRPLIKNLYDVFRSIRDDELEHVKTMFACERGKGALTSPN 594
            DV F  RPIQRFWFLETVARMPYFSY+SML  YETLGWW  GAEVRKVHFAEE+NEM HL+IMESLGGD  W DRF  +HAA  Y+W+L   ++VSP +AYNFSELIE HAVDTY EFAE NKELL SLPP+P A+ YY G D+Y+FDEFQTSR   +RRP + NLYDVF +IRDDE EHVKTM AC+ G   + SPN
Sbjct:  326 DVIFNGRPIQRFWFLETVARMPYFSYISMLHLYETLGWWRVGAEVRKVHFAEEWNEMHHLKIMESLGGDNQWVDRFFGQHAAFFYYWILNFLFLVSPKVAYNFSELIEFHAVDTYEEFAEANKELLMSLPPSPVAVEYYRGEDLYMFDEFQTSRRPATRRPKVDNLYDVFCNIRDDEFEHVKTMVACQDGGQPIISPN 523          
BLAST of mRNA_M-pyrifera_M_contig7782.18307.1 vs. uniprot
Match: D8RPE6_SELML (Ubiquinol oxidase n=2 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8RPE6_SELML)

HSP 1 Score: 281 bits (719), Expect = 3.620e-93
Identity = 133/198 (67.17%), Postives = 159/198 (80.30%), Query Frame = 1
Query:    1 DVTFEDRPIQRFWFLETVARMPYFSYLSMLFFYETLGWWSGGAEVRKVHFAEEYNEMQHLRIMESLGGDTLWSDRFLARHAAIVYFWVLTLGYIVSPFLAYNFSELIESHAVDTYTEFAEVNKELLQSLPPTPQALAYYHGGDMYLFDEFQTSRPAFSRRPLIKNLYDVFRSIRDDELEHVKTMFACERGKGALTSPN 594
            DV FE RPIQRFWFLETVARMPYFSY+SML  YETLGWW  GA+VRKVHFAEE+NEM HL+IMESLGGD LW DRF  +HAA  Y+W+L   + VSP +AYNFSELIE HAVDTY +F + N+ELL+ LPP+P+A+AYY   D+Y+FDEFQTSR   SRRP + +LYDVF +I+ DE EHVKTM AC+R +  + SP+
Sbjct:   53 DVIFEGRPIQRFWFLETVARMPYFSYISMLHLYETLGWWRVGADVRKVHFAEEWNEMHHLKIMESLGGDLLWGDRFFGQHAAFFYYWILNFMFFVSPKVAYNFSELIEMHAVDTYGQFVDENEELLKQLPPSPEAVAYYENEDLYMFDEFQTSRAPESRRPKVDSLYDVFVAIKGDEFEHVKTMAACQRAE-TVASPH 249          
BLAST of mRNA_M-pyrifera_M_contig7782.18307.1 vs. uniprot
Match: A0A0G4F067_VITBC (Uncharacterized protein n=3 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4F067_VITBC)

HSP 1 Score: 293 bits (750), Expect = 1.060e-92
Identity = 145/203 (71.43%), Postives = 165/203 (81.28%), Query Frame = 1
Query:    1 DVTFEDRPIQRFWFLETVARMPYFSYLSMLFFYETLGWWSGGAEVRKVHFAEEYNEMQHLRIMESLGGDTLWSDRFLARHAAIVYFWVLTLGYIVSPFLAYNFSELIESHAVDTYTEFAEVNKELLQSLPPTPQALAYYHGGDMYLFDEFQTSRPAFSRRPLIKNLYDVFRSIRDDELEHVKTMFACERGKGALT-SPNAAAA 606
            DV + +RPIQRFWFLETVARMPYF+Y+SML  YETLGWW  G EVRKVHFAEE+NEM HL IMESLGGD  W DRFLARHAAIVY+WVL L +++SP  AYNFSELIE HAVDTY +F   NK++L+ LP    A+ YY  GD+Y+FDEFQTSRPA SRRP I NLYDVF +IRDDELEHVKTM AC+R + A+  SPNAAAA
Sbjct:  443 DVLYNERPIQRFWFLETVARMPYFAYISMLHLYETLGWWRVGTEVRKVHFAEEWNEMHHLFIMESLGGDQAWLDRFLARHAAIVYYWVLILLFLISPTWAYNFSELIEWHAVDTYGQFVSQNKQILKRLPAPAVAMEYYKSGDLYMFDEFQTSRPAQSRRPQINNLYDVFTTIRDDELEHVKTMSACQRLEAAMVMSPNAAAA 645          
BLAST of mRNA_M-pyrifera_M_contig7782.18307.1 vs. uniprot
Match: A0A2K1IAY0_PHYPA (Ubiquinol oxidase n=3 Tax=Physcomitrium patens TaxID=3218 RepID=A0A2K1IAY0_PHYPA)

HSP 1 Score: 286 bits (731), Expect = 6.220e-92
Identity = 137/198 (69.19%), Postives = 159/198 (80.30%), Query Frame = 1
Query:    1 DVTFEDRPIQRFWFLETVARMPYFSYLSMLFFYETLGWWSGGAEVRKVHFAEEYNEMQHLRIMESLGGDTLWSDRFLARHAAIVYFWVLTLGYIVSPFLAYNFSELIESHAVDTYTEFAEVNKELLQSLPPTPQALAYYHGGDMYLFDEFQTSRPAFSRRPLIKNLYDVFRSIRDDELEHVKTMFACERGKGALTSPN 594
            DV F DRPIQRFWFLETVARMPYFSY+SML  YETLGWW  GAEVRKVHFAEE+NEM HLRIMESLGGD  W DRF A+HAA  Y+WVL L +++SP +AYNFSELIE HAVDTY EFA+ N+ELL++LPP P AL YY   D+Y++DEFQTS+   +RRP I NLYDVF++I  DELEHVKTM AC+     + SP+
Sbjct:  273 DVIFNDRPIQRFWFLETVARMPYFSYISMLHLYETLGWWRIGAEVRKVHFAEEWNEMHHLRIMESLGGDLEWGDRFFAQHAAFFYYWVLNLMFLISPKVAYNFSELIEMHAVDTYGEFADANEELLKTLPPPPAALEYYESEDLYMYDEFQTSQAPETRRPKINNLYDVFKAISGDELEHVKTMSACQTLDMPIKSPH 470          
BLAST of mRNA_M-pyrifera_M_contig7782.18307.1 vs. uniprot
Match: A0A0G4EY52_VITBC (Uncharacterized protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4EY52_VITBC)

HSP 1 Score: 285 bits (730), Expect = 1.010e-91
Identity = 141/202 (69.80%), Postives = 161/202 (79.70%), Query Frame = 1
Query:    1 DVTFEDRPIQRFWFLETVARMPYFSYLSMLFFYETLGWWSGGAEVRKVHFAEEYNEMQHLRIMESLGGDTLWSDRFLARHAAIVYFWVLTLGYIVSPFLAYNFSELIESHAVDTYTEFAEVNKELLQSLPPTPQALAYYHGGDMYLFDEFQTSRPAFSRRPLIKNLYDVFRSIRDDELEHVKTMFACERGKGALTSPNAAAA 606
            D  +  RPIQRFW LETVAR+PY SY+SML  YETLGWW  G EVR+VHFAEE+NEM HL IMESLGGD  W DRFLARHAAIVY+WV+   +++SP  AYNFSEL+E HA DTY EF E NK+ L+ LP    AL YY+GGD+YLFDEFQ+SRPA SRRP I NLYDVF +IRDDELEHVKTM AC+R + A+ SPNAAAA
Sbjct:  266 DRLYAGRPIQRFWTLETVARIPYMSYISMLHLYETLGWWRVGVEVRRVHFAEEWNEMHHLFIMESLGGDQAWFDRFLARHAAIVYYWVVIFLFLISPTWAYNFSELVEWHATDTYAEFVEQNKDRLKRLPAPAVALEYYNGGDLYLFDEFQSSRPAESRRPNIDNLYDVFVTIRDDELEHVKTMSACQRLESAMKSPNAAAA 467          
BLAST of mRNA_M-pyrifera_M_contig7782.18307.1 vs. uniprot
Match: A0A6U1QBH7_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A6U1QBH7_9STRA)

HSP 1 Score: 285 bits (729), Expect = 2.230e-91
Identity = 137/198 (69.19%), Postives = 159/198 (80.30%), Query Frame = 1
Query:    1 DVTFEDRPIQRFWFLETVARMPYFSYLSMLFFYETLGWWSGGAEVRKVHFAEEYNEMQHLRIMESLGGDTLWSDRFLARHAAIVYFWVLTLGYIVSPFLAYNFSELIESHAVDTYTEFAEVNKELLQSLPPTPQALAYYHGGDMYLFDEFQTSRPAFSRRPLIKNLYDVFRSIRDDELEHVKTMFACERGKGALTSPN 594
            D  F+ RPIQRFW LETVARMPYFSY+SML  YETLGWWS G EVRKVHFAEE+NEM+HL IME+LGGD +W DRF ARHAAIVY+W+L L Y+ SP L+YNFSELIE HAVDTY EF   NKELL+SLPP  +A+ YY   DMY+FDEFQT R A SRRP+++ LYDVF +IR DE EHV+TMFAC+  +  + SPN
Sbjct:  271 DTLFKGRPIQRFWCLETVARMPYFSYISMLHLYETLGWWSQGVEVRKVHFAEEWNEMRHLAIMEALGGDQIWLDRFFARHAAIVYYWLLNLIYLWSPRLSYNFSELIEWHAVDTYEEFVIQNKELLKSLPPPIEAMEYYMANDMYMFDEFQTGRKAGSRRPVVRTLYDVFDNIRADEYEHVRTMFACQEHESFIESPN 468          
BLAST of mRNA_M-pyrifera_M_contig7782.18307.1 vs. uniprot
Match: A0A7S3XP24_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XP24_HETAK)

HSP 1 Score: 282 bits (722), Expect = 2.290e-91
Identity = 140/202 (69.31%), Postives = 162/202 (80.20%), Query Frame = 1
Query:    1 DVTFEDRPIQRFWFLETVARMPYFSYLSMLFFYETLGWWSGGAEVRKVHFAEEYNEMQHLRIMESLGGDTLWSDRFLARHAAIVYFWVLTLGYIVSPFLAYNFSELIESHAVDTYTEFAEVNKELLQSLPPTPQALAYYHGGDMYLFDEFQTSRPAFSRRPLIKNLYDVFRSIRDDELEHVKTMFACERGKGALTSPNAAAA 606
            D  F+ RPIQRFWFLET+ARMPYFSYLSML  YETLGWW+ G EVRKVHFAEE+NE++HL+IM+SLGGD  W+DRF ARHAAI+Y+W+L L + VSP  AYNFSELIE HAVD+Y +F E N+ELL+ LPP   A+ YY  GDMYLFDEFQTSR   SRRP I NLYDVFR+I +DELEHVKT+ AC+     L SPN AAA
Sbjct:  133 DFIFDGRPIQRFWFLETIARMPYFSYLSMLHLYETLGWWTVGEEVRKVHFAEEWNELRHLKIMQSLGGDAAWADRFFARHAAILYYWLLNLMFSVSPRAAYNFSELIEFHAVDSYGQFLEENEELLRRLPPPKAAVDYYMSGDMYLFDEFQTSRAPRSRRPKINNLYDVFRNIMEDELEHVKTVTACQISDN-LGSPNLAAA 333          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig7782.18307.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JCH2_9PHAE1.310e-12592.08Cyclic nucleotide-binding domain-containing protei... [more]
A0A7S1KCS9_9ALVE4.180e-9771.29Hypothetical protein n=1 Tax=Vitrella brassicaform... [more]
A0A835YR99_9STRA1.280e-9668.64Alternative oxidase n=1 Tax=Tribonema minus TaxID=... [more]
A0A1Y1HI87_KLENI3.620e-9470.71Ubiquinol oxidase n=1 Tax=Klebsormidium nitens Tax... [more]
D8RPE6_SELML3.620e-9367.17Ubiquinol oxidase n=2 Tax=Selaginella moellendorff... [more]
A0A0G4F067_VITBC1.060e-9271.43Uncharacterized protein n=3 Tax=Vitrella brassicaf... [more]
A0A2K1IAY0_PHYPA6.220e-9269.19Ubiquinol oxidase n=3 Tax=Physcomitrium patens Tax... [more]
A0A0G4EY52_VITBC1.010e-9169.80Uncharacterized protein n=2 Tax=Vitrella brassicaf... [more]
A0A6U1QBH7_9STRA2.230e-9169.19Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S3XP24_HETAK2.290e-9169.31Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig7782contigM-pyrifera_M_contig7782:2712..6099 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score377.1
Seed ortholog evalue5.2e-102
Seed eggNOG ortholog2880.D7FVT3
KEGG rclassRC00061
KEGG koko:K17893
KEGG ReactionR09504
Hectar predicted targeting categoryother localisation
EggNOG free text desc.ubiquinol:oxygen oxidoreductase activity
EggNOG OGs2CMS2@1,2QRMM@2759
EC1.10.3.11
COG Functional cat.C
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000
Exons6
Model size606
Cds size606
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig7782.18307.1prot_M-pyrifera_M_contig7782.18307.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig7782 2712..6099 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816679.4628453-CDS-M-pyrifera_M_contig7782:2711..27701622816679.4628453-CDS-M-pyrifera_M_contig7782:2711..2770Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7782 2712..2770 +
1692278115.2395523-CDS-M-pyrifera_M_contig7782:2711..27701692278115.2395523-CDS-M-pyrifera_M_contig7782:2711..2770Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7782 2712..2770 +
1622816679.4743328-CDS-M-pyrifera_M_contig7782:3157..32541622816679.4743328-CDS-M-pyrifera_M_contig7782:3157..3254Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7782 3158..3254 +
1692278115.250587-CDS-M-pyrifera_M_contig7782:3157..32541692278115.250587-CDS-M-pyrifera_M_contig7782:3157..3254Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7782 3158..3254 +
1622816679.4873278-CDS-M-pyrifera_M_contig7782:3543..36601622816679.4873278-CDS-M-pyrifera_M_contig7782:3543..3660Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7782 3544..3660 +
1692278115.269921-CDS-M-pyrifera_M_contig7782:3543..36601692278115.269921-CDS-M-pyrifera_M_contig7782:3543..3660Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7782 3544..3660 +
1622816679.4998982-CDS-M-pyrifera_M_contig7782:4549..46781622816679.4998982-CDS-M-pyrifera_M_contig7782:4549..4678Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7782 4550..4678 +
1692278115.279107-CDS-M-pyrifera_M_contig7782:4549..46781692278115.279107-CDS-M-pyrifera_M_contig7782:4549..4678Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7782 4550..4678 +
1622816679.5174108-CDS-M-pyrifera_M_contig7782:5293..54031622816679.5174108-CDS-M-pyrifera_M_contig7782:5293..5403Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7782 5294..5403 +
1692278115.2876842-CDS-M-pyrifera_M_contig7782:5293..54031692278115.2876842-CDS-M-pyrifera_M_contig7782:5293..5403Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7782 5294..5403 +
1622816679.5291688-CDS-M-pyrifera_M_contig7782:6005..60991622816679.5291688-CDS-M-pyrifera_M_contig7782:6005..6099Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7782 6006..6099 +
1692278115.295713-CDS-M-pyrifera_M_contig7782:6005..60991692278115.295713-CDS-M-pyrifera_M_contig7782:6005..6099Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7782 6006..6099 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig7782.18307.1

>prot_M-pyrifera_M_contig7782.18307.1 ID=prot_M-pyrifera_M_contig7782.18307.1|Name=mRNA_M-pyrifera_M_contig7782.18307.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=202bp
DVTFEDRPIQRFWFLETVARMPYFSYLSMLFFYETLGWWSGGAEVRKVHF
AEEYNEMQHLRIMESLGGDTLWSDRFLARHAAIVYFWVLTLGYIVSPFLA
YNFSELIESHAVDTYTEFAEVNKELLQSLPPTPQALAYYHGGDMYLFDEF
QTSRPAFSRRPLIKNLYDVFRSIRDDELEHVKTMFACERGKGALTSPNAA
AA
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mRNA from alignment at M-pyrifera_M_contig7782:2712..6099+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig7782.18307.1 ID=mRNA_M-pyrifera_M_contig7782.18307.1|Name=mRNA_M-pyrifera_M_contig7782.18307.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=3388bp|location=Sequence derived from alignment at M-pyrifera_M_contig7782:2712..6099+ (Macrocystis pyrifera P11B4 male)
GACGTGACTTTCGAGGATCGCCCTATCCAACGGTTCTGGTTTTTGGAGAC GGTGGCGAGGTACAGTAGTGACGCTGTCCAAACGATTTGCCGTCGAGAGA AAACAAAGCCCAGTGAATGTCTAGGCTCTAAGAATTCTGATTGTGTTGGG GCTTCGATAGGAACCTTTTACGAAATGTTCGGAGAATAAGAAGCCTTGCC TGCCCTCGCACGCGTCACACGGCAACCTGGGCGTTGAATCGAGAGCTGTC ATGCGTCGGTAACCTCATTGTAAGCTTTGAAAAATGAGGTGGGCGATTTC GATCGCATGTCAACATAATTCGAAGTTAGGAAGCAGGCCGAGTATGTAGG AGCCTGCCTCACACTTTTCAAGCGTCACCTGTGGACAGGTCTGTACCGCG ATAACCCTCTTCCCCTTCCCCCCATTCCAATCCCTTGTGAACCCAGGATG CCGTACTTTTCGTACTTATCGATGCTGTTCTTCTACGAAACCTTAGGGTG GTGGAGCGGAGGGGCCGAAGTCAGGAAGGTTCACTTTGCGGAGGTGCGTA TGCTGAGCAAAACACACAGCACTTGTGTTATACCTTTCCTCCGTACAGGC AGAAGGGCAGAAGCAGTATAGCCTTTGATTTATGTACCAGGCAGATCGCA ATGGCCTGGAGATAGCGGCAGTAGCGACAGCAGTTACGCTAGCCAACGAC GCGACAGTGGTGCGCGTTTCACCACAAACGCTTCTTAGTTACCTGTTGAC CGGGCGTCTGTCCCTTGCCTGCCCTCCCACGCATGCGCACGGCAACCTCT GTTCGCGTCTCGTCGGGACGCGTGGCGTGCAGGAGTATAACGAGATGCAG CACCTGAGGATCATGGAGTCCTTGGGTGGGGACACGCTGTGGTCAGACCG ATTTTTGGCGAGGCACGCCGCCATCGTATATTTCTGGGTGCTCACTCTGG TAGGTGGATGGGCGGGCGGATGGGTGGGTGGGTGGGTGGACGGGTGGAGG GGGGTAGAAGTGTCGGTCGGTGAGGGGGCGAGGGAGTGGGTGGGGGCCCG GGTGAGTGATGGAATGAGGGGGTGGGTGGGTTGGTTGGTTGGGAGAGGGC GGGAGGGTGTCGCCTTAACGTCCATATCGCAATGGCTGTTCAGGTGCTTC TCTTACCCGTTACCTCTTCTTGAGCGCTGCGACTGTTCGTGGCTTTGCAC CCGCCCCAAATTTTGTCAGAGTCGAGCTGCAGCCTTTTTGCAAAAGTATG ACCCATTTCGACCCAGAGTCGCCTGTCAACTTCTCCACAGTTTTTTCCCA CCGCTTGCACCCATGCCTACGCAAATTTATGCGTGTGTTCGCGGCGGACT TGCCTTCTCGCACAGTTGAACGTTTCTTGGGGTCGAGAGTCTAGACTCAC AATATTTTTTGGTGACGATGTCGGCTCGCTACAGTCAGACACATACTGTT ATCTTGCTCGCACCGAGATACTGAACTAGTATATGCTTACCAATAGCAGT GAGGAGAAGGTCTCCCCTTGCTTCGGTGAAGCAACATTTTGTGTTCCCTT CTCAATATGCAAGGGCCTTCCCCACCCTCGCCCCTCGCCGGACCTCCCTC ATCCCTCCTCCTGAAACTCTAAATCGTTAATTCCGATTCACAGTGCCGTT CGTGTTTGTCCATGACCCCCATGCGAGAGGGCTTAACTCCTAAAGGACTG CACCCACGATTTTAGGAATCCAAACACTCGAATTTAGCGTAGGTCACGTT TTGCATCAGCTCCCCCTCGCCGTTACGTAACCGTCCGGAAAAAACTGCGC GTGGCGTTCCCGTCGGCTGTAACTGTCCCCCCCTACAGGGATACATTGTG TCGCCCTTCTTGGCCTACAACTTCAGCGAACTGATCGAGAGCCACGCCGT AGACACATACACGGAGTTCGCCGAAGTCAACAAGGAGTTGCTCCAGAGCT TGCCGCCCACTCCGCAGGTGAAGAGGGTGTCCCATTCAGAGGTCAACGAA AGGCAATGTGTGTGTGCGTTCCACGTCCTCTTTTGCCGCTAGCCTCGAGC ATTGCGTTGTGTGTATGTGTACCCATGCCCTCCTTTTCCGCTAGCCTCGA GTGTCGCGTCGTGTGTGTGCTTCCCGCGGTTCCCTGAAAGACGAGGGATG GGTAGGGGAATGGCGATACGAGAGGCGCACGCGGGCCGCGGGGGCGGCTG AGAAGCTGTGTTCAGGAACGGACGCAGGCTGTGTTCTCCTTCAAAATGGC CGTATGATGCCCCTCCTCGTTTTTGAGCGCTCCCATGTTTTGCGAGGTTT TTTCGTGATCGTGTTGAAATATTCGCTCTTCTGCACACGAGCCTTGGATA CGATTTTTACTTATTGTTTCTCCTGATTGAACGGACAGTATCGTAGGCAG TCGCCTGGTGGATAGGCTCAGGCCGTTCGTCTCCCGTCCCACCGGCTCTC TCCCATGCCGTTAGAAACCCGTGGTCGATTCCTGTGCATTCACCAAGACG TGCGAAACGCCTAGCCTCTCTCCCTCCCCCCCCACGCCCTTGCTTTCCCA CGCAACCGCCACGCTTTGATTCGGCATGGCAGGCGTTGGCGTACTACCAC GGGGGAGACATGTACCTGTTCGACGAGTTCCAGACAAGCCGTCCAGCGTT CAGCCGCCGCCCGCTCATCAAGAACCTCTACGATGTATTCAGGTGGGGCG AGCATACCTCCACCTTTCCCGGCGCTACACGCGATAGTACTCGACGACCA CACCTGCTGCTGTTGCTGCTGCTGTTGCTGCTGCTGTTGCTGCTGCTACC GCGTGCCAGCGCAGAAATAACGTTGGTGGCCGAAGATTTTGTGGTAGTAT CGGCTACACTCCCCCTGTGGAGAACGCTAGTTGGTGAGGGCGATCTGCGA GCGCCAATTCATCCCTCAGTGCACCCCCTGCCTCTTCCCACCCGTGGCTG TATGGTATTAGCGGCTATTGAGACTAGGCCCTTGAGGAGGGCATCGCCCA CCGTTCCCTGTGAGACTTCCCTGACAACAGACCGGCTGCTTTATCATCAA GAACCCGCGATTTTGCCACGTGCGATCCCAGACTCTGCACAGTACGAAGG GTTCGTTCCGGGTAAGCGCTCGGCGGCGCACCGAATACCCCCCCACCCCT CCGCCCCTTCCCCGCCACTCTCCCCGCCTCACCATTTTCCCACCCCCACC ACCCATGACCCCACTCCCCCGCTCCCCCCACCGCCTCCCTCACTCACCCC TCCTCCCCCCCCTCCCCTGGATCCCCCGTGCCCGTTTCCCTAAGATCCAT CCGCGACGACGAGCTGGAACACGTCAAGACCATGTTCGCGTGCGAGCGCG GCAAGGGGGCACTCACCTCTCCTAACGCCGCGGCGGCC
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig7782:2712..6099+

>mRNA_M-pyrifera_M_contig7782.18307.1 ID=mRNA_M-pyrifera_M_contig7782.18307.1|Name=mRNA_M-pyrifera_M_contig7782.18307.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1212bp|location=Sequence derived from alignment at M-pyrifera_M_contig7782:2712..6099+ (Macrocystis pyrifera P11B4 male)
GACGTGACTTTCGAGGATCGCCCTATCCAACGGTTCTGGTTTTTGGAGAC
GGTGGCGAGGACGTGACTTTCGAGGATCGCCCTATCCAACGGTTCTGGTT
TTTGGAGACGGTGGCGAGGATGCCGTACTTTTCGTACTTATCGATGCTGT
TCTTCTACGAAACCTTAGGGTGGTGGAGCGGAGGGGCCGAAGTCAGGAAG
GTTCACTTTGCGGAGGATGCCGTACTTTTCGTACTTATCGATGCTGTTCT
TCTACGAAACCTTAGGGTGGTGGAGCGGAGGGGCCGAAGTCAGGAAGGTT
CACTTTGCGGAGGAGTATAACGAGATGCAGCACCTGAGGATCATGGAGTC
CTTGGGTGGGGACACGCTGTGGTCAGACCGATTTTTGGCGAGGCACGCCG
CCATCGTATATTTCTGGGTGCTCACTCTGGAGTATAACGAGATGCAGCAC
CTGAGGATCATGGAGTCCTTGGGTGGGGACACGCTGTGGTCAGACCGATT
TTTGGCGAGGCACGCCGCCATCGTATATTTCTGGGTGCTCACTCTGGGAT
ACATTGTGTCGCCCTTCTTGGCCTACAACTTCAGCGAACTGATCGAGAGC
CACGCCGTAGACACATACACGGAGTTCGCCGAAGTCAACAAGGAGTTGCT
CCAGAGCTTGCCGCCCACTCCGCAGGGATACATTGTGTCGCCCTTCTTGG
CCTACAACTTCAGCGAACTGATCGAGAGCCACGCCGTAGACACATACACG
GAGTTCGCCGAAGTCAACAAGGAGTTGCTCCAGAGCTTGCCGCCCACTCC
GCAGGCGTTGGCGTACTACCACGGGGGAGACATGTACCTGTTCGACGAGT
TCCAGACAAGCCGTCCAGCGTTCAGCCGCCGCCCGCTCATCAAGAACCTC
TACGATGTATTCAGGCGTTGGCGTACTACCACGGGGGAGACATGTACCTG
TTCGACGAGTTCCAGACAAGCCGTCCAGCGTTCAGCCGCCGCCCGCTCAT
CAAGAACCTCTACGATGTATTCAGATCCATCCGCGACGACGAGCTGGAAC
ACGTCAAGACCATGTTCGCGTGCGAGCGCGGCAAGGGGGCACTCACCTCT
CCTAACGCCGCGGCGGCCATCCATCCGCGACGACGAGCTGGAACACGTCA
AGACCATGTTCGCGTGCGAGCGCGGCAAGGGGGCACTCACCTCTCCTAAC
GCCGCGGCGGCC
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