mRNA_M-pyrifera_M_contig77799.18303.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig77799.18303.1
Unique NamemRNA_M-pyrifera_M_contig77799.18303.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
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BLAST of mRNA_M-pyrifera_M_contig77799.18303.1 vs. uniprot
Match: A0A354BAY5_9ACTN (Lysine--tRNA ligase n=8 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A354BAY5_9ACTN)

HSP 1 Score: 512 bits (1319), Expect = 1.350e-179
Identity = 248/279 (88.89%), Postives = 266/279 (95.34%), Query Frame = 1 
Query:    1 THHNALDTELFLRIAPELYLKRLVVGGMERVFEIGRVFRNEGMSTRHNPEFTMLELYWAYADHTDMMTLTEDLVAAAATDVIGSTTIDYDGREVDLSTPWRRATMEELILEHAGVEISLDTPIGELRALCDKFGVEVKDHYGPGKLILEIYEKTTEPELWGPIFVTDYPVEVSPLSREHRERPGYAERFEAIVAGRELCNGFSELTDPVVQRERFEAQEAEGAAGDDEAMVVDEDYLRALDYGLPGTAGLGIGIDRLVMLLTGTTTIRDVVLFPTLRPE 837
            THHNAL  +L+LRIAPELYLKRLVVGGME+VFEIGRVFRNEGMSTRHNPEFTMLELYWAYADH DMM LTE+LVA  A  V+G+TT++YDGREVDLSTPWRRATMEELI EHAGVEISL+TP+ ELR+LC++FGVEVKDHYGPGKLILEIYEKT E ELWGP+FVTDYPVEVSPLSREHRERPGY ERFEAIVAGRELCNGFSELTDPV+QRERFEAQEAEGAAGDDEAMVVDEDYLRALDYGLPGTAGLGIG+DRL+MLLTGTTTIRDVVLFPTL+PE
Sbjct:  188 THHNALGEDLYLRIAPELYLKRLVVGGMEKVFEIGRVFRNEGMSTRHNPEFTMLELYWAYADHADMMELTENLVAGVAEQVLGTTTVEYDGREVDLSTPWRRATMEELIAEHAGVEISLETPMDELRSLCERFGVEVKDHYGPGKLILEIYEKTCEAELWGPVFVTDYPVEVSPLSREHRERPGYTERFEAIVAGRELCNGFSELTDPVIQRERFEAQEAEGAAGDDEAMVVDEDYLRALDYGLPGTAGLGIGVDRLIMLLTGTTTIRDVVLFPTLKPE 466
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BLAST of mRNA_M-pyrifera_M_contig77799.18303.1 vs. uniprot
Match: A0A7K2A1I0_9ACTN (Lysine--tRNA ligase n=8 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A7K2A1I0_9ACTN)

HSP 1 Score: 439 bits (1128), Expect = 9.470e-151
Identity = 211/279 (75.63%), Postives = 236/279 (84.59%), Query Frame = 1 
Query:    1 THHNALDTELFLRIAPELYLKRLVVGGMERVFEIGRVFRNEGMSTRHNPEFTMLELYWAYADHTDMMTLTEDLVAAAATDVIGSTTIDYDGREVDLSTPWRRATMEELILEHAGVEISLDTPIGELRALCDKFGVEVKDHYGPGKLILEIYEKTTEPELWGPIFVTDYPVEVSPLSREHRERPGYAERFEAIVAGRELCNGFSELTDPVVQRERFEAQEAEGAAGDDEAMVVDEDYLRALDYGLPGTAGLGIGIDRLVMLLTGTTTIRDVVLFPTLRPE 837
            THH AL  +L+LR+APELYLKRLVVGGMERV+EIGRVFRNEG+STRHNPEFTMLELYWAYADHTD+M LTE+LVA  A +V GST + YDGRE+DL+ PWRRATM+E+I EH G E+SLDTP  EL ALCD  G+ ++D +G GKL+LE+YEK  EP LWGP+FVTDYP EVSPLSR HR RPGYAERFE IVAGRELCN F+EL DP  QR RFEAQ A  AAGDDEAM+VDEDYLRALDYGLP T GLGIG+DRLVMLLT T  IRD VLFPTLRP+
Sbjct:  190 THHEALHADLYLRVAPELYLKRLVVGGMERVYEIGRVFRNEGISTRHNPEFTMLELYWAYADHTDIMELTENLVATVAAEVCGSTAVVYDGREMDLAPPWRRATMDEVIAEHTGAEVSLDTPRPELAALCDSLGIAIQDGWGAGKLLLELYEKAAEPNLWGPVFVTDYPAEVSPLSRRHRSRPGYAERFEGIVAGRELCNAFTELVDPAEQRSRFEAQAALRAAGDDEAMLVDEDYLRALDYGLPPTGGLGIGVDRLVMLLTDTQAIRDAVLFPTLRPD 468
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BLAST of mRNA_M-pyrifera_M_contig77799.18303.1 vs. uniprot
Match: A0A2E8LHC1_9ACTN (Lysine--tRNA ligase n=2 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A2E8LHC1_9ACTN)

HSP 1 Score: 437 bits (1123), Expect = 1.460e-149
Identity = 213/280 (76.07%), Postives = 242/280 (86.43%), Query Frame = 1 
Query:    1 THHNALDTELFLRIAPELYLKRLVVGGMERVFEIGRVFRNEGMSTRHNPEFTMLELYWAYADHTDMMTLTEDLVAAAATDVIGSTTIDYDGREVDLSTPWRRATMEELILEHAGVEISLDTPIGELRALCDKFGVEVKDHYGPGKLILEIYEKTTEPELWGPIFVTDYPVEVSPLSREHRERPGYAERFEAIVAGRELCNGFSELTDPVVQRERFEAQEAEGAAGDDEAMVVDEDYLRALDYGLPGTAGLGIGIDRLVMLLTGTTTIRDVVLFPTLRPEQ 840
            THHNALD +L+LRIAPELYLKRL VGGMERVFE+ RVFRNEG+STRHNPEFTMLELY AYAD+ D+M L E+LVA  A  + G+T ++YDGR++DLS PWRRAT+ EL+ EHAG+E+ LDTP  EL  LC++  + VKDH GPGKLI+E+YEKTTEPELWGP+FV DYP EVSPLSR+HR+RPG+ ERFE IVAGRELCN F+EL DP  QRERFEAQEA  AAGDDEAMVVDEDYLRAL+YGLP T GLGIGIDRLVMLLTGTT IRDV+LFPTLRPEQ
Sbjct:  202 THHNALDLDLYLRIAPELYLKRLTVGGMERVFEVARVFRNEGVSTRHNPEFTMLELYQAYADYHDIMALVEELVAHLAETLHGTTQLEYDGRQLDLSVPWRRATLTELLAEHAGLEVDLDTPRDELVRLCEERDIPVKDHDGPGKLIMELYEKTTEPELWGPVFVVDYPKEVSPLSRDHRDRPGWVERFEGIVAGRELCNAFTELVDPDDQRERFEAQEAGRAAGDDEAMVVDEDYLRALEYGLPPTGGLGIGIDRLVMLLTGTTAIRDVILFPTLRPEQ 481
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BLAST of mRNA_M-pyrifera_M_contig77799.18303.1 vs. uniprot
Match: A0A2E4SUK9_9ACTN (Lysine--tRNA ligase n=2 Tax=root TaxID=1 RepID=A0A2E4SUK9_9ACTN)

HSP 1 Score: 434 bits (1115), Expect = 8.310e-149
Identity = 212/280 (75.71%), Postives = 239/280 (85.36%), Query Frame = 1 
Query:    1 THHNALDTELFLRIAPELYLKRLVVGGMERVFEIGRVFRNEGMSTRHNPEFTMLELYWAYADHTDMMTLTEDLVAAAATDVIGSTTIDYDGREVDLSTPWRRATMEELILEHAGVEISLDTPIGELRALCDKFGVEVKDHYGPGKLILEIYEKTTEPELWGPIFVTDYPVEVSPLSREHRERPGYAERFEAIVAGRELCNGFSELTDPVVQRERFEAQEAEGAAGDDEAMVVDEDYLRALDYGLPGTAGLGIGIDRLVMLLTGTTTIRDVVLFPTLRPEQ 840
            THHNALD +L+LRIAPELYLKRL VGG ERVFEI RVFRNEG+STRHNPEFTMLELY AYAD+TD+M L E+LVA  AT+V G+TT+ YDGRE+DLS PWRRAT+ EL+ EH G+ + LDTP  EL  LC +  + VKDHYGPGKLILE+YEKTTEPELWGP+FVTDYP EVSPLSR+HR++ G+ ERFE IVAGRELCN F+EL D   QR RFEAQEAE  AGD EAM VDEDYLRAL+YGLP T GLGIG+DRLVM+LTGTTTIRDV+LFPTLRPEQ
Sbjct:  194 THHNALDLDLYLRIAPELYLKRLTVGGFERVFEIARVFRNEGLSTRHNPEFTMLELYQAYADYTDIMELVEELVAHLATEVCGTTTLTYDGRELDLSVPWRRATLLELLAEHGGLIVDLDTPRDELVRLCQEHDISVKDHYGPGKLILELYEKTTEPELWGPVFVTDYPKEVSPLSRDHRDQTGWVERFEGIVAGRELCNAFTELVDADEQRARFEAQEAEKVAGDVEAMAVDEDYLRALEYGLPPTGGLGIGMDRLVMILTGTTTIRDVILFPTLRPEQ 473
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BLAST of mRNA_M-pyrifera_M_contig77799.18303.1 vs. uniprot
Match: A0A800ICK1_9ACTN (Lysine--tRNA ligase n=1 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A800ICK1_9ACTN)

HSP 1 Score: 434 bits (1115), Expect = 8.310e-149
Identity = 212/280 (75.71%), Postives = 242/280 (86.43%), Query Frame = 1 
Query:    1 THHNALDTELFLRIAPELYLKRLVVGGMERVFEIGRVFRNEGMSTRHNPEFTMLELYWAYADHTDMMTLTEDLVAAAATDVIGSTTIDYDGREVDLSTPWRRATMEELILEHAGVEISLDTPIGELRALCDKFGVEVKDHYGPGKLILEIYEKTTEPELWGPIFVTDYPVEVSPLSREHRERPGYAERFEAIVAGRELCNGFSELTDPVVQRERFEAQEAEGAAGDDEAMVVDEDYLRALDYGLPGTAGLGIGIDRLVMLLTGTTTIRDVVLFPTLRPEQ 840
            THHNALD +L+LRIAPELYLKRLVVGG ERVFEI RVFRNEG+STRHNPEFTMLELY AYAD+TD+M L E+LVA  A +++G+T++ YDG+E+DLS PWRRATM EL+LEHAG+++ L TP  EL A+C++  V VKDHYG GKLILE+YEKTTE +LWGPIFVTDYP EVSPLSR+HR++PG+ ERFE IVAGRELCN FSEL DP  QR RF AQE+E AAGD EAMVVDEDYLRALDYGLP T GLGIG+DRLVMLL  TT IRDV+LFPTLRPEQ
Sbjct:  190 THHNALDLDLYLRIAPELYLKRLVVGGFERVFEIARVFRNEGLSTRHNPEFTMLELYQAYADYTDIMVLVEELVAHLAQEILGTTSLTYDGQELDLSVPWRRATMRELLLEHAGLDVDLATPREELVAMCEQHEVPVKDHYGSGKLILELYEKTTEAKLWGPIFVTDYPQEVSPLSRDHRDQPGWVERFEGIVAGRELCNAFSELVDPEEQRNRFSAQESEKAAGDAEAMVVDEDYLRALDYGLPPTGGLGIGMDRLVMLLADTTAIRDVILFPTLRPEQ 469
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BLAST of mRNA_M-pyrifera_M_contig77799.18303.1 vs. uniprot
Match: A0A2D6PGJ5_9ACTN (Lysine--tRNA ligase n=4 Tax=root TaxID=1 RepID=A0A2D6PGJ5_9ACTN)

HSP 1 Score: 429 bits (1104), Expect = 5.400e-147
Identity = 205/280 (73.21%), Postives = 240/280 (85.71%), Query Frame = 1 
Query:    1 THHNALDTELFLRIAPELYLKRLVVGGMERVFEIGRVFRNEGMSTRHNPEFTMLELYWAYADHTDMMTLTEDLVAAAATDVIGSTTIDYDGREVDLSTPWRRATMEELILEHAGVEISLDTPIGELRALCDKFGVEVKDHYGPGKLILEIYEKTTEPELWGPIFVTDYPVEVSPLSREHRERPGYAERFEAIVAGRELCNGFSELTDPVVQRERFEAQEAEGAAGDDEAMVVDEDYLRALDYGLPGTAGLGIGIDRLVMLLTGTTTIRDVVLFPTLRPEQ 840
            THHNALD +L+LR+APELYLKRL VGGMERVFE+ RVFRNEG+STRHNPEFTMLELY AYAD+TD+M L E++VA  A  ++G T++ YDGR++DLS PWRRAT+ EL+ EH G+++ LDTP  EL  LC++ G+ V+DHYG GKLILE+YEKTTEPELWGP+FVTDYP EVSPLSR+HR+RPG+ ERFE IVAGRELCN F+EL DP  QRERF AQE   AAGD EAM VDEDYLRAL++GLP T GLGIG+DRL+MLLTGTT IRDV+LFPTLRPEQ
Sbjct:  194 THHNALDLDLYLRVAPELYLKRLTVGGMERVFEVARVFRNEGVSTRHNPEFTMLELYQAYADYTDIMALVEEMVAYLAETLLGXTSVVYDGRDIDLSVPWRRATLTELLAEHGGLQVDLDTPRDELVRLCEERGIPVEDHYGAGKLILELYEKTTEPELWGPVFVTDYPKEVSPLSRDHRDRPGWVERFEGIVAGRELCNAFTELVDPDEQRERFVAQEXGRAAGDAEAMPVDEDYLRALEFGLPPTGGLGIGVDRLIMLLTGTTAIRDVILFPTLRPEQ 473
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BLAST of mRNA_M-pyrifera_M_contig77799.18303.1 vs. uniprot
Match: A0A5Q2RI69_9ACTN (Lysine--tRNA ligase n=1 Tax=Actinomarinicola tropica TaxID=2789776 RepID=A0A5Q2RI69_9ACTN)

HSP 1 Score: 426 bits (1095), Expect = 1.210e-145
Identity = 210/280 (75.00%), Postives = 239/280 (85.36%), Query Frame = 1 
Query:    1 THHNALDTELFLRIAPELYLKRLVVGGMERVFEIGRVFRNEGMSTRHNPEFTMLELYWAYADHTDMMTLTEDLVAAAATDVIGSTTIDYDGREVDLSTPWRRATMEELILEHAGVEISLDTPIGELRALCDKFGVEVKDHYGPGKLILEIYEKTTEPELWGPIFVTDYPVEVSPLSREHRERPGYAERFEAIVAGRELCNGFSELTDPVVQRERFEAQEAEGAAGDDEAMVVDEDYLRALDYGLPGTAGLGIGIDRLVMLLTGTTTIRDVVLFPTLRPEQ 840
            THHNALD +LFLRIAPELYLKRL VGG ERVFEIGRVFRNEG+STRHNPEFTMLELY AYAD+TD+M LTE+LVA  AT++ GST+I Y GR++DLS PWRRAT++ELI EH G+EIS+DTP+ ELR +C+++ +  KD +G GKL+LE+YEKT E ELWGP+FVTDYP EVSPLSR+HRER GY ERFEAIVAGREL N FSELTDP  QR R ++Q    AAGD+EAMVVDEDYLRALDYGLP T GLGIGIDRLVMLL    +IRDVVLFPTLRPEQ
Sbjct:  202 THHNALDQDLFLRIAPELYLKRLTVGGFERVFEIGRVFRNEGISTRHNPEFTMLELYQAYADYTDVMALTEELVAHLATELCGSTSISYQGRDLDLSVPWRRATLDELITEHTGLEISVDTPLEELRGICERYDIPWKDGWGTGKLLLEVYEKTVEHELWGPVFVTDYPTEVSPLSRDHRERRGYTERFEAIVAGRELGNAFSELTDPGEQRSRMQSQADAKAAGDEEAMVVDEDYLRALDYGLPPTGGLGIGIDRLVMLLADVHSIRDVVLFPTLRPEQ 481
[Close]
BLAST of mRNA_M-pyrifera_M_contig77799.18303.1 vs. uniprot
Match: A0A7C7S4K7_9ACTN (Lysine--tRNA ligase n=5 Tax=root TaxID=1 RepID=A0A7C7S4K7_9ACTN)

HSP 1 Score: 426 bits (1095), Expect = 1.340e-145
Identity = 209/280 (74.64%), Postives = 235/280 (83.93%), Query Frame = 1 
Query:    1 THHNALDTELFLRIAPELYLKRLVVGGMERVFEIGRVFRNEGMSTRHNPEFTMLELYWAYADHTDMMTLTEDLVAAAATDVIGSTTIDYDGREVDLSTPWRRATMEELILEHAGVEISLDTPIGELRALCDKFGVEVKDHYGPGKLILEIYEKTTEPELWGPIFVTDYPVEVSPLSREHRERPGYAERFEAIVAGRELCNGFSELTDPVVQRERFEAQEAEGAAGDDEAMVVDEDYLRALDYGLPGTAGLGIGIDRLVMLLTGTTTIRDVVLFPTLRPEQ 840
            THHNALD EL+LRIAPELYLKRL VGG ERVFEI RVFRNEG+S RHNPEFTMLELY AYAD++D+M L E+LVA  A D+ G+T + YDGRE+DLS PWRRATM EL+ EH G+ + LDT +  L  LC + G+ V+DHYGPGKLILE+YEK  EPELWGP+FVTDYP EVSPLSR+HRE PG+ ERFE IVAGRELCN F+EL DP  QR RFEAQE   AAGD EAMV+DEDYLRAL+YGLP T GLGIG+DRLVMLLTGTTTIRDV+LFPTLRPEQ
Sbjct:  206 THHNALDLELYLRIAPELYLKRLTVGGFERVFEIARVFRNEGISPRHNPEFTMLELYQAYADYSDIMVLVEELVAHLAMDLHGTTKLSYDGRELDLSVPWRRATMLELLEEHGGIVVDLDTDMDMLVGLCTERGIPVEDHYGPGKLILELYEKLAEPELWGPVFVTDYPKEVSPLSRDHREHPGWVERFEGIVAGRELCNAFTELVDPDEQRARFEAQEVGKAAGDAEAMVIDEDYLRALEYGLPPTGGLGIGMDRLVMLLTGTTTIRDVILFPTLRPEQ 485
[Close]
BLAST of mRNA_M-pyrifera_M_contig77799.18303.1 vs. uniprot
Match: A0A2E2WY30_9ACTN (Lysine--tRNA ligase n=2 Tax=Actinobacteria TaxID=201174 RepID=A0A2E2WY30_9ACTN)

HSP 1 Score: 423 bits (1088), Expect = 1.390e-144
Identity = 208/280 (74.29%), Postives = 235/280 (83.93%), Query Frame = 1 
Query:    1 THHNALDTELFLRIAPELYLKRLVVGGMERVFEIGRVFRNEGMSTRHNPEFTMLELYWAYADHTDMMTLTEDLVAAAATDVIGSTTIDYDGREVDLSTPWRRATMEELILEHAGVEISLDTPIGELRALCDKFGVEVKDHYGPGKLILEIYEKTTEPELWGPIFVTDYPVEVSPLSREHRERPGYAERFEAIVAGRELCNGFSELTDPVVQRERFEAQEAEGAAGDDEAMVVDEDYLRALDYGLPGTAGLGIGIDRLVMLLTGTTTIRDVVLFPTLRPEQ 840
            TH NALD  L+LRIAPELYLKRL VGG ERVFEI RVFRNEG+STRHNPEFTMLELY AYAD+TD+M L E+LVA  A D+ G+TT+ YDGRE+DL+ PWRRATM EL+ EH G+ + LDT + EL  LC + G+ V+DHYGPGKLILE+YEK  E ELWGP+FVTDYP EVSPLSR+HR++PG+ ERFE IVAGRE+CN F+ L DP  QR RFEAQEA  AAGD EAM VDEDYLRALDYGLP T GLGIG+DRLVMLLTGTTTIRDV+LFPTLRPEQ
Sbjct:  203 THXNALDLXLYLRIAPELYLKRLTVGGFERVFEIARVFRNEGLSTRHNPEFTMLELYQAYADYTDIMVLVEELVAHLAMDLHGTTTLAYDGRELDLAVPWRRATMLELLEEHGGIVVDLDTDLDELVGLCAERGIPVEDHYGPGKLILELYEKVAESELWGPVFVTDYPKEVSPLSRDHRDQPGWVERFEGIVAGREICNAFTXLVDPDEQRARFEAQEAATAAGDAEAMAVDEDYLRALDYGLPPTGGLGIGMDRLVMLLTGTTTIRDVILFPTLRPEQ 482
[Close]
BLAST of mRNA_M-pyrifera_M_contig77799.18303.1 vs. uniprot
Match: A0A6B1ED03_9ACTN (Lysine--tRNA ligase n=2 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A6B1ED03_9ACTN)

HSP 1 Score: 421 bits (1083), Expect = 1.040e-143
Identity = 205/279 (73.48%), Postives = 233/279 (83.51%), Query Frame = 1 
Query:    1 THHNALDTELFLRIAPELYLKRLVVGGMERVFEIGRVFRNEGMSTRHNPEFTMLELYWAYADHTDMMTLTEDLVAAAATDVIGSTTIDYDGREVDLSTPWRRATMEELILEHAGVEISLDTPIGELRALCDKFGVEVKDHYGPGKLILEIYEKTTEPELWGPIFVTDYPVEVSPLSREHRERPGYAERFEAIVAGRELCNGFSELTDPVVQRERFEAQEAEGAAGDDEAMVVDEDYLRALDYGLPGTAGLGIGIDRLVMLLTGTTTIRDVVLFPTLRPE 837
            T H AL  +L+LR+APELYLKRLVVGGMERV+EI RVFRNEG+STRHNPEFTMLELY AYADHTD+M LTE LVA  A DV GSTT+ YDG++VDL+ PWRRATMEE+I EH G+++SL+    EL A+CD+ G+E++  +GPGKL+LEIYEKT EP LWGP+FVTDYP EVSPLSR HR RPGY ERFEAIVAGRELCN F+EL DP  QR RFEAQ    AAGD EAMVVDEDYLR+L+YGLP T GLGIG+DRLVMLLT T  IRD VLFPTLRP+
Sbjct:  206 TRHEALHADLYLRVAPELYLKRLVVGGMERVYEIARVFRNEGISTRHNPEFTMLELYQAYADHTDIMELTEHLVAGVARDVCGSTTVVYDGQDVDLAPPWRRATMEEVIAEHTGLDVSLEAGSAELEAVCDRLGIEIEAGWGPGKLLLEIYEKTAEPNLWGPVFVTDYPEEVSPLSRRHRSRPGYTERFEAIVAGRELCNAFTELVDPAEQRSRFEAQAELRAAGDAEAMVVDEDYLRSLEYGLPPTGGLGIGVDRLVMLLTDTQAIRDAVLFPTLRPD 484
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig77799.18303.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A354BAY5_9ACTN1.350e-17988.89Lysine--tRNA ligase n=8 Tax=Acidimicrobiaceae bact... [more]
A0A7K2A1I0_9ACTN9.470e-15175.63Lysine--tRNA ligase n=8 Tax=Acidimicrobiaceae bact... [more]
A0A2E8LHC1_9ACTN1.460e-14976.07Lysine--tRNA ligase n=2 Tax=Acidimicrobiaceae bact... [more]
A0A2E4SUK9_9ACTN8.310e-14975.71Lysine--tRNA ligase n=2 Tax=root TaxID=1 RepID=A0A... [more]
A0A800ICK1_9ACTN8.310e-14975.71Lysine--tRNA ligase n=1 Tax=Acidimicrobiia bacteri... [more]
A0A2D6PGJ5_9ACTN5.400e-14773.21Lysine--tRNA ligase n=4 Tax=root TaxID=1 RepID=A0A... [more]
A0A5Q2RI69_9ACTN1.210e-14575.00Lysine--tRNA ligase n=1 Tax=Actinomarinicola tropi... [more]
A0A7C7S4K7_9ACTN1.340e-14574.64Lysine--tRNA ligase n=5 Tax=root TaxID=1 RepID=A0A... [more]
A0A2E2WY30_9ACTN1.390e-14474.29Lysine--tRNA ligase n=2 Tax=Actinobacteria TaxID=2... [more]
A0A6B1ED03_9ACTN1.040e-14373.48Lysine--tRNA ligase n=2 Tax=Acidimicrobiaceae bact... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig77799contigM-pyrifera_M_contig77799:2..841 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score368.2
Seed ortholog evalue3.3e-99
Seed eggNOG ortholog1229780.BN381_110049
Preferred namelysS
KEGG rclassRC00055,RC00523
KEGG koko:K04567
KEGG ReactionR03658
KEGG Pathwayko00970,map00970
KEGG ModuleM00359,M00360
Hectar predicted targeting categoryother localisation
GOsGO:0000166,GO:0000287,GO:0003674,GO:0003824,GO:0004812,GO:0004824,GO:0005488,GO:0005524,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006430,GO:0006518,GO:0006520,GO:0006629,GO:0006644,GO:0006650,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0009058,GO:0009059,GO:0009405,GO:0009987,GO:0010467,GO:0016020,GO:0016070,GO:0016874,GO:0016875,GO:0017076,GO:0019538,GO:0019637,GO:0019752,GO:0030312,GO:0030322,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034641,GO:0034645,GO:0034660,GO:0035639,GO:0036094,GO:0040007,GO:0042221,GO:0042391,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044419,GO:0044424,GO:0044444,GO:0044464,GO:0046471,GO:0046483,GO:0046486,GO:0046677,GO:0046872,GO:0050896,GO:0051704,GO:0065007,GO:0065008,GO:0071704,GO:0071944,GO:0090304,GO:0090407,GO:0097159,GO:0097367,GO:0140098,GO:0140101,GO:1901265,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576
EggNOG free text desc.Belongs to the class-II aminoacyl-tRNA synthetase family
EggNOG OGs2GKE0@201174,3UW8P@52018,COG1190@1,COG1190@2
EC6.1.1.6
COG Functional cat.J
BiGG ReactioniAF1260.b4129,iECDH1ME8569_1439.ECDH1ME8569_3989,iECW_1372.ECW_m4490,iEcDH1_1363.EcDH1_3862,iJN678.lysS,iJO1366.b4129,iWFL_1372.ECW_m4490
Best tax levelunclassified Actinobacteria (class)
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01007,ko03016
Exons1
Model size840
Cds size840
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816679.187247-CDS-M-pyrifera_M_contig77799:1..8411622816679.187247-CDS-M-pyrifera_M_contig77799:1..841Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig77799 2..841 +
1692278115.0591214-CDS-M-pyrifera_M_contig77799:1..8411692278115.0591214-CDS-M-pyrifera_M_contig77799:1..841Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig77799 2..841 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig77799.18303.1prot_M-pyrifera_M_contig77799.18303.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig77799 2..841 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig77799.18303.1

>prot_M-pyrifera_M_contig77799.18303.1 ID=prot_M-pyrifera_M_contig77799.18303.1|Name=mRNA_M-pyrifera_M_contig77799.18303.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=280bp
THHNALDTELFLRIAPELYLKRLVVGGMERVFEIGRVFRNEGMSTRHNPE
FTMLELYWAYADHTDMMTLTEDLVAAAATDVIGSTTIDYDGREVDLSTPW
RRATMEELILEHAGVEISLDTPIGELRALCDKFGVEVKDHYGPGKLILEI
YEKTTEPELWGPIFVTDYPVEVSPLSREHRERPGYAERFEAIVAGRELCN
GFSELTDPVVQRERFEAQEAEGAAGDDEAMVVDEDYLRALDYGLPGTAGL
GIGIDRLVMLLTGTTTIRDVVLFPTLRPEQ
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mRNA from alignment at M-pyrifera_M_contig77799:2..841+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig77799.18303.1 ID=mRNA_M-pyrifera_M_contig77799.18303.1|Name=mRNA_M-pyrifera_M_contig77799.18303.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=840bp|location=Sequence derived from alignment at M-pyrifera_M_contig77799:2..841+ (Macrocystis pyrifera P11B4 male)
ACCCACCACAACGCGCTCGACACCGAGCTCTTCCTGCGGATCGCGCCCGA
GCTCTATCTGAAGCGCCTCGTCGTCGGTGGCATGGAGCGGGTCTTCGAGA
TCGGGCGGGTCTTCCGAAACGAGGGCATGTCGACCCGGCACAACCCCGAG
TTCACGATGCTCGAGCTCTACTGGGCCTACGCCGACCACACCGACATGAT
GACCCTCACCGAGGATCTGGTCGCCGCCGCGGCCACCGACGTCATCGGCT
CGACCACGATCGACTACGACGGACGCGAGGTCGACCTGTCCACACCGTGG
CGCCGAGCGACCATGGAGGAGCTCATCCTCGAACACGCCGGCGTCGAGAT
CAGCCTCGACACCCCGATCGGTGAGCTGCGCGCCCTGTGCGACAAGTTCG
GTGTCGAAGTGAAGGACCACTACGGCCCCGGCAAGCTCATCCTCGAGATC
TACGAGAAGACCACCGAGCCTGAACTCTGGGGCCCGATCTTCGTCACCGA
CTATCCGGTCGAGGTGTCGCCCCTTTCTCGCGAACATCGCGAACGCCCCG
GCTACGCCGAACGCTTCGAGGCGATCGTCGCCGGCCGCGAGCTGTGCAAC
GGATTCTCGGAGCTGACCGACCCGGTCGTGCAGCGCGAACGGTTCGAGGC
CCAAGAGGCCGAGGGTGCAGCGGGCGACGACGAGGCGATGGTCGTCGACG
AGGACTATCTCCGTGCGCTCGACTACGGCCTCCCCGGCACCGCCGGGCTG
GGCATCGGCATCGACCGTCTCGTGATGCTGCTCACCGGCACCACCACCAT
CCGCGACGTCGTCCTCTTCCCGACCCTCCGCCCCGAACAG
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig77799:2..841+

>mRNA_M-pyrifera_M_contig77799.18303.1 ID=mRNA_M-pyrifera_M_contig77799.18303.1|Name=mRNA_M-pyrifera_M_contig77799.18303.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1680bp|location=Sequence derived from alignment at M-pyrifera_M_contig77799:2..841+ (Macrocystis pyrifera P11B4 male)
ACCCACCACAACGCGCTCGACACCGAGCTCTTCCTGCGGATCGCGCCCGA
GCTCTATCTGAAGCGCCTCGTCGTCGGTGGCATGGAGCGGGTCTTCGAGA
TCGGGCGGGTCTTCCGAAACGAGGGCATGTCGACCCGGCACAACCCCGAG
TTCACGATGCTCGAGCTCTACTGGGCCTACGCCGACCACACCGACATGAT
GACCCTCACCGAGGATCTGGTCGCCGCCGCGGCCACCGACGTCATCGGCT
CGACCACGATCGACTACGACGGACGCGAGGTCGACCTGTCCACACCGTGG
CGCCGAGCGACCATGGAGGAGCTCATCCTCGAACACGCCGGCGTCGAGAT
CAGCCTCGACACCCCGATCGGTGAGCTGCGCGCCCTGTGCGACAAGTTCG
GTGTCGAAGTGAAGGACCACTACGGCCCCGGCAAGCTCATCCTCGAGATC
TACGAGAAGACCACCGAGCCTGAACTCTGGGGCCCGATCTTCGTCACCGA
CTATCCGGTCGAGGTGTCGCCCCTTTCTCGCGAACATCGCGAACGCCCCG
GCTACGCCGAACGCTTCGAGGCGATCGTCGCCGGCCGCGAGCTGTGCAAC
GGATTCTCGGAGCTGACCGACCCGGTCGTGCAGCGCGAACGGTTCGAGGC
CCAAGAGGCCGAGGGTGCAGCGGGCGACGACGAGGCGATGGTCGTCGACG
AGGACTATCTCCGTGCGCTCGACTACGGCCTCCCCGGCACCGCCGGGCTG
GGCATCGGCATCGACCGTCTCGTGATGCTGCTCACCGGCACCACCACCAT
CCGCGACGTCGTCCTCTTCCCGACCCTCCGCCCCGAACAGACCCACCACA
ACGCGCTCGACACCGAGCTCTTCCTGCGGATCGCGCCCGAGCTCTATCTG
AAGCGCCTCGTCGTCGGTGGCATGGAGCGGGTCTTCGAGATCGGGCGGGT
CTTCCGAAACGAGGGCATGTCGACCCGGCACAACCCCGAGTTCACGATGC
TCGAGCTCTACTGGGCCTACGCCGACCACACCGACATGATGACCCTCACC
GAGGATCTGGTCGCCGCCGCGGCCACCGACGTCATCGGCTCGACCACGAT
CGACTACGACGGACGCGAGGTCGACCTGTCCACACCGTGGCGCCGAGCGA
CCATGGAGGAGCTCATCCTCGAACACGCCGGCGTCGAGATCAGCCTCGAC
ACCCCGATCGGTGAGCTGCGCGCCCTGTGCGACAAGTTCGGTGTCGAAGT
GAAGGACCACTACGGCCCCGGCAAGCTCATCCTCGAGATCTACGAGAAGA
CCACCGAGCCTGAACTCTGGGGCCCGATCTTCGTCACCGACTATCCGGTC
GAGGTGTCGCCCCTTTCTCGCGAACATCGCGAACGCCCCGGCTACGCCGA
ACGCTTCGAGGCGATCGTCGCCGGCCGCGAGCTGTGCAACGGATTCTCGG
AGCTGACCGACCCGGTCGTGCAGCGCGAACGGTTCGAGGCCCAAGAGGCC
GAGGGTGCAGCGGGCGACGACGAGGCGATGGTCGTCGACGAGGACTATCT
CCGTGCGCTCGACTACGGCCTCCCCGGCACCGCCGGGCTGGGCATCGGCA
TCGACCGTCTCGTGATGCTGCTCACCGGCACCACCACCATCCGCGACGTC
GTCCTCTTCCCGACCCTCCGCCCCGAACAG
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