mRNA_M-pyrifera_M_contig7764.18269.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig7764.18269.1 vs. uniprot
Match: D7G576_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G576_ECTSI) HSP 1 Score: 428 bits (1101), Expect = 4.140e-131 Identity = 257/471 (54.56%), Postives = 312/471 (66.24%), Query Frame = 1 Query: 1 REVVQAAFVEADGLSWGQPGVDSLRAKLRARQGDLQLSIAAADAVVKETIRKLALQSLEGALIALRSGGGG----SPVDQVLRSIADIFRLKEAAALLVQVSPEIDCSRYFVGVLVGSPSLRLTESEKRAIFRVQLERALKDMRLDEEDKAALADLRDMLQLVDSDSRKVFLDVVNPLLAQRLAGMVELGDFSAQDVVKLEEDLAVPHEVFLDACMEAYHAQLTKLLESSEQDDG---GGVFFMPSDTDKAALDFVAESLDLSPEQLYTIHDITCGPAFKAAAVSVLT---EAEXXXXXXXXXXGHEHEEPAILVLDTWRRRLGMSNDGARAAFVGAFYEVVAHKIKQASVSIEALKDAREFMPSXXXXXXXXXXXXXXXXXXKGGDASNVSPTLSTPPSGAI--TVAPGR---DAAXXXXXXXXXXXXXXXEEALTQEGRLQAKAAEVMDRVVGLAAFCDRAGASKDLEV 1368 RE +QAAF EA GL G+PGVD+LRAKLR+RQ DLQL++AAADAVVKETIRKLAL+SLE AL+A+R+GGGG SP VLRS+ ++F+L+EA +LLVQ +P+ DCSRYF GVLVGSPSLRL ESEKRAIFR+QLE AL+D LDE+DK LA+L MLQL ++D R++ + VVNPLL++RLA +E DF+AQDV KL++DL VP + FLD CMEAYHA+LT LLE E+ G GV SDTDKAALD AE+L LS EQLYTIHDITCGP KAAA+ +LT EAE + E + L T R RLGMS DGARAAFVGAF+EVVA I++ SV+IEALKDAR+ MP S+ SP L GA+ P D + E L L +A E+M RV+ LA+ C+RAGASK+LEV Sbjct: 460 REAIQAAFAEAVGLQRGEPGVDALRAKLRSRQADLQLTMAAADAVVKETIRKLALRSLEVALVAMRNGGGGGPGGSPESYVLRSMTEVFQLREAVSLLVQNTPDADCSRYFTGVLVGSPSLRLAESEKRAIFRIQLEHALEDAHLDEDDKGTLAELGSMLQLAEADVRQIHVSVVNPLLSRRLAETIERKDFTAQDVAKLQQDLTVPADTFLDTCMEAYHAKLTNLLEEGEKSRGPPVSGVISDISDTDKAALDSAAEALGLSKEQLYTIHDITCGPVLKAAALELLTAVAEAEVDEGDG------QQPETVAMALKTSRDRLGMSKDGARAAFVGAFFEVVAPNIQEVSVAIEALKDARKGMPKAMPATAF----------------SSASPLLVNSGGGAMDDVTTPALADCDGSAVGEQSVAAVAKPRNGEGLGHAEELGMRADEIMGRVLRLASLCERAGASKELEV 908
BLAST of mRNA_M-pyrifera_M_contig7764.18269.1 vs. uniprot
Match: A0A6H5JD75_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JD75_9PHAE) HSP 1 Score: 406 bits (1044), Expect = 1.770e-123 Identity = 249/487 (51.13%), Postives = 306/487 (62.83%), Query Frame = 1 Query: 1 REVVQAAFVEADGLSWGQPGVDSLRAKLRARQGDLQLSIAAADAVVKETIRKLALQSLEGALIALRSGGGGSPVDQ----VLRSIADIFRLKEAAALLVQVSPEIDCSRYFVGVLVGSPSLRLTESEKRAIFRVQLERALKDMRLDEEDKAA---------------------LADLRDMLQLVDSDSRKVFLDVVNPLLAQRLAGMVELGDFSAQDVVKLEEDLAVPHEVFLDACMEAYHAQLTKLLESSEQDDG---GGVFFMPSDTDKAALDFVAESLDLSPEQLYTIHDITCGPAFKAAAVSVLT---EAEXXXXXXXXXXGHEHEEPAILVLDTWRRRLGMSNDGARAAFVGAFYEVVAHKIKQASVSIEALKDAREFMPSXXXXXXXXXXXXXXXXXXKGGDASNVSPTLSTPPSGAITVAPGRDAAXXXXXXXXXXXXXXXEEALTQEGRLQAKAAEVMDRVVGLAAFCDRAGASKDLEV 1368 RE +QAAF EA GL G+PGVD+LRAKLR+RQ DLQLS+AAADA VKETIRKLAL SLE AL+ALR+GGG P D VLRS+ ++F+L+EA +LLVQ +P+ +CSRYF GVLVGSPSLRL ESEKRAIFR+QLE AL+DMRLDE+DK LA+L MLQL ++D R++ + +VNPLL++RLA +E DF+AQDV KL++DL VP + FLD CMEAYHA+LT LLE ++ G GV SD D AAL AE+L LS EQLYTIHDITCGP KAAA+ +LT EAE + E +VL T R RLGMS DGARAAFVGA++EVVA I++ SV+IEALKDAR+ M GG +V A+ D + E L +L +A E+M RV+ LA+ C+RAGASK+LEV Sbjct: 429 REALQAAFAEAVGLQRGEPGVDALRAKLRSRQADLQLSMAAADAAVKETIRKLALGSLEVALVALRNGGGDGPGDSPESDVLRSMTEVFQLREAVSLLVQNTPDAECSRYFTGVLVGSPSLRLAESEKRAIFRIQLEHALEDMRLDEDDKVMRQALKVSMSRWKKCRCLGKGELAELGSMLQLAEADVRQIHVSIVNPLLSRRLAETIERNDFTAQDVAKLQQDLTVPADTFLDTCMEAYHAKLTNLLEEGKKSRGPPVSGVISDISDIDMAALGSAAEALGLSKEQLYTIHDITCGPVLKAAALELLTAVAEAEVDEGVG------QQTEAVAMVLGTSRDRLGMSKDGARAAFVGAYFEVVAPNIQEVSVAIEALKDARKGMRKAMPATAFSSTTPLLVNSGDGGARDDV----------AMPALARCDGSTVGDQSIAAVAEQCNGEGLGHAKKLDTRADEIMGRVLRLASLCERAGASKELEV 899
BLAST of mRNA_M-pyrifera_M_contig7764.18269.1 vs. uniprot
Match: A0A836C8K3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8K3_9STRA) HSP 1 Score: 171 bits (432), Expect = 2.290e-42 Identity = 141/381 (37.01%), Postives = 197/381 (51.71%), Query Frame = 1 Query: 1 REVVQAAFVE---------ADGLSWGQPGVDSLRAKLRARQGDLQLSIAAADAVVKETIRKLALQSLEGALIALRSGGGGSP-VDQVLRSIADIFRLKEAAALLVQVSPEIDCSRYFVGVLVGSPSLRLTESEKRAIFRVQLERALKDMRLDEEDKAALADLRDMLQLVDSDSRKVFLDVVNPLLAQRLAGMVELG-DFSAQDVVKLEEDLAVPHEVFLDACMEAYHAQLTKLLESSEQDDGGGVFFMPSDTDKAALDFVAESLDLSPEQLYTIHDITCGP--------------------AFKAAAVSVLTEAEXXXXXXXXXXGHEHEEPAILVLDTWRRRLGMSNDGARAAFVGAFYEVVAHKIKQASVSIEALKDAR 1050 RE ++ AF E A L WG PGVD+LR L+ RQ LQLS AAAD+V+KETIRK A QSLE AL A+R+ P +D V ++ + LL+Q P +D ++YF GVLVGSPSLRL+++EK+A++R + L+D RLDE+DKA+L +L MLQL +++ V+L +V P++AQ LA + E G + V + LAVP +F + EAY A+L +++ GGV P+ +HD C P XXXXXXXXXXG + P L+ RRRLG+S ARAA++ AF AH + +++A+ +AR Sbjct: 254 RESLERAFAEERHPAEWPQAMRLQWGDPGVDALRGTLKERQSQLQLSQAAADSVLKETIRKAAQQSLEAALAAVRNPPESGPDMDVVAAAVGE---------LLLQAGPGVDTAKYFAGVLVGSPSLRLSDTEKQAMYRCFMSACLRDGRLDEDDKASLWELSGMLQLAEAEGYAVYLGLVQPMVAQHLAHVAESGAPWDGAAVAAFADGLAVPRSLFAEIAAEAYGARL-----AADARANGGV---PAAAXXXXXXXXXXXXXXXXXXXEALHDAACAPHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSDSATP----LEALRRRLGVSRGAARAAYLDAFN---AHAAPRWRAALDAVAEAR 610 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig7764.18269.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 3
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig7764.18269.1 >prot_M-pyrifera_M_contig7764.18269.1 ID=prot_M-pyrifera_M_contig7764.18269.1|Name=mRNA_M-pyrifera_M_contig7764.18269.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=461bp REVVQAAFVEADGLSWGQPGVDSLRAKLRARQGDLQLSIAAADAVVKETIback to top mRNA from alignment at M-pyrifera_M_contig7764:1410..11555+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig7764.18269.1 ID=mRNA_M-pyrifera_M_contig7764.18269.1|Name=mRNA_M-pyrifera_M_contig7764.18269.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=10146bp|location=Sequence derived from alignment at M-pyrifera_M_contig7764:1410..11555+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig7764:1410..11555+ >mRNA_M-pyrifera_M_contig7764.18269.1 ID=mRNA_M-pyrifera_M_contig7764.18269.1|Name=mRNA_M-pyrifera_M_contig7764.18269.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=2766bp|location=Sequence derived from alignment at M-pyrifera_M_contig7764:1410..11555+ (Macrocystis pyrifera P11B4 male)back to top |