mRNA_M-pyrifera_M_contig77521.18245.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig77521.18245.1
Unique NamemRNA_M-pyrifera_M_contig77521.18245.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig77521.18245.1 vs. uniprot
Match: A0A2D6QBF0_9ARCH (Uncharacterized protein n=1 Tax=Candidatus Woesearchaeota archaeon TaxID=2026803 RepID=A0A2D6QBF0_9ARCH)

HSP 1 Score: 196 bits (498), Expect = 1.250e-57
Identity = 127/261 (48.66%), Postives = 153/261 (58.62%), Query Frame = 1
Query:    1 PLSAPLLEGGGLVDHVFRVPRGQGLLGLGGYRAALGAAREHAWDLAIDLQRIAKSALLARLSGAPRVLGWDRVRAKEGAWLLVRERVARTDPHKHMVEQYADFARHLGLAPREPFGLLAREPGAAARWA---AHPWQGPVAVVNVGASTPQKRWAPERFGAVAAALAAA-GLHVVLTGNGADDRAAAGTALATAHAAGAPHVESLVDHTTLPELTELLARAELFVGCDTGPMHMAVSLGCRTLALFGTGRARRTGPYGARA 771
            PL+APL+     VD V    RGQGL G   +R      R   ++LA+DLQR+ KSALLAR SGAPRVLG+DR R KE +WL  RER+       HMV+QY +FARHLGL       +L  +P A A WA      W  P  ++N+GAS P  RW  ERFG +A +LA      +V TG G D  AA       A AAG   V +LV  T+L +L  LL RA LFVGCDTGPMH+AV+     LALFG     RTGP+G RA
Sbjct:   47 PLAAPLVRNHPAVDRVHVWERGQGLAG---WRTIRNEVRAEEYELAVDLQRLFKSALLARASGAPRVLGFDRARTKECSWLFTRERIDAGPMRAHMVDQYLEFARHLGLDDARARHVLPVDPDADA-WAREQVEAWGAPPRILNLGASKPANRWPAERFGQLAKSLAQEQSAPIVFTGGGEDQGAAQ-----IAAAAGPEGVINLVGATSLLQLVSLLGRASLFVGCDTGPMHLAVAQQVPVLALFGPADPARTGPFGDRA 298          
BLAST of mRNA_M-pyrifera_M_contig77521.18245.1 vs. uniprot
Match: A0A518D433_9BACT (ADP-heptose--LPS heptosyltransferase 2 n=1 Tax=Planctomycetes bacterium Pla163 TaxID=2528008 RepID=A0A518D433_9BACT)

HSP 1 Score: 191 bits (486), Expect = 7.420e-56
Identity = 128/254 (50.39%), Postives = 147/254 (57.87%), Query Frame = 1
Query:    4 LSAPLLEGGGLVDHVFRVPRGQGLLGLGGYRAALGAAREHAWDLAIDLQRIAKSALLARLSGAPRVLGWDRVRAKEGAWLLVRERVARTDPHKHMVEQYADFARHLGL-APREPFGLLAREPGAAARWAAHPWQGPVAVVNVGASTPQKRWAPERFGAVAAALAAAGLHVVLTGNGADDRAAAGTALATAHAAGAPHVESLVDHTTLPELTELLARAELFVGCDTGPMHMAVSLGCRTLALFGTGRARRTGPYG 762
            L+ PL+EG   VD V    RG G  G    RA     R   +DLA+DLQRIAKSALLAR SGAPRVLG+DR RAKE +WLL  ER+A   PH+HMV+QY  FARHLG   P E    +  E  A A            ++N GAS P+ RW+PE FGA+A  L   G   V+   G  DR  A   LA A     P V  LV  TTLP L  L  RA L V  DTGPMH+AV++G  TLALFG    RRTGPYG
Sbjct:   62 LALPLVEGHPSVDRVHLWRRGSGGAGR---RAVTRELRAERYDLAVDLQRIAKSALLARASGAPRVLGYDRRRAKEFSWLLATERIAPGPPHEHMVDQYLAFARHLGCDGPAEHLLPVDAEADAWAAALVDELGAAPVLINPGASKPRNRWSPECFGALAKRLVEDGAAPVVAIGGPGDRELATALLAAA----GPGVRDLVGATTLPRLIALERRARLVVTGDTGPMHLAVAVGTPTLALFGPADPRRTGPYG 308          
BLAST of mRNA_M-pyrifera_M_contig77521.18245.1 vs. uniprot
Match: A0A800G485_9BACT (Glycosyltransferase family 9 protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A800G485_9BACT)

HSP 1 Score: 190 bits (482), Expect = 2.510e-55
Identity = 126/259 (48.65%), Postives = 152/259 (58.69%), Query Frame = 1
Query:    4 LSAPLLEGGGLVDHVFRVPRGQGLLGLGGYRAALGAAREHAWDLAIDLQRIAKSALLARLSGAPRVLGWDRVRAKEGAWLLVRERVARTDPHKHMVEQYADFARHLGLAPREPFGLLAREPGAAARWA---AHPWQGPVAVVNVGASTPQKRWAPERFGAVAAALAAA-GLHVVLTGNGADDRAAAGTALATAHAAGAPHVESLVDHTTLPELTELLARAELFVGCDTGPMHMAVSLGCRTLALFGTGRARRTGPYGAR 768
            L+APL+     VD V    RGQGL G   +RA     R   ++LA+DLQR+ KSALLAR S APRVLG+DR R KE +WL  RER+       HMV+QY +FARHLGL       +L  +P A A WA      W  P  ++N+GAS P K W  ERFG +A AL       VV TG G +D+ AA  A A    AG   V +LV  T+L +L  LL  A LFVGCDTGPMH+AV+     LALFG G   RTGP+G R
Sbjct:   45 LAAPLVHNHPAVDRVHVWERGQGLAG---WRAVRDEVRAEGYELAVDLQRLFKSALLARASRAPRVLGFDRARTKECSWLFTRERITAGPKRAHMVDQYLEFARHLGLGEARARHVLPADPAADA-WARGLVEAWGAPPWIMNLGASKPAKCWPAERFGQLAHALTQEWNAPVVFTG-GREDQGAAQIATA----AGPEGVVNLVGGTSLEQLIALLGHARLFVGCDTGPMHLAVAQQVPVLALFGPGDPARTGPFGDR 294          
BLAST of mRNA_M-pyrifera_M_contig77521.18245.1 vs. uniprot
Match: A0A521K5F7_9BACT (Glycosyltransferase family 9 protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A521K5F7_9BACT)

HSP 1 Score: 187 bits (476), Expect = 2.090e-54
Identity = 130/267 (48.69%), Postives = 152/267 (56.93%), Query Frame = 1
Query:    1 PLSAPLLEGGGLVDHVFRVPRGQGLLGLGGYRAALGAAREHAWDLAIDLQRIAKSALLARLSGAPRVLGWDRVRAKEGAWLLVRERVARTD-------PHKHMVEQYADFARHLGLAPREPFGLLAREPGAAARWAAHPWQ---GPVAVVNVGASTPQKRWAPERFGAVAAALAAAGLHVVLTGNGADDRAAAGTALATAHAAGAPHVESLVDHTTLPELTELLARAELFVGCDTGPMHMAVSLGCRTLALFGTGRARRTGPYGARA 771
            PL+ PL+     VD V    +  G    G +RA +   R   ++LAID QRI KSAL+AR S APRVLG+DR R KE +WLL RERVA          P +HMVEQYAD   HLGL PR P          AA WA         P  +VNVGAS P  RW PERF  +A ALAA    V +TG GA DR  A  AL      GAP+V  LV  T+L +  EL  RA L+VGCDTGPMH+A + GCR +ALFG     RTGP+ A A
Sbjct:   44 PLAEPLVRANPAVDRVHVWNKAGGA---GAFRALVRELRAERYELAIDAQRIFKSALVARWSRAPRVLGYDRARCKEQSWLLTRERVAARPAAPSAGAPARHMVEQYADLLEHLGL-PRAPLEHPLPRSSEAAAWADAQLARCGAPPILVNVGASKPANRWRPERFAELALALAARA-PVCVTG-GAADRELARAALERLR--GAPNVHDLVGATSLVQYVELARRARLYVGCDTGPMHVAAAAGCRCVALFGPADPARTGPWPAAA 302          
BLAST of mRNA_M-pyrifera_M_contig77521.18245.1 vs. uniprot
Match: A0A7Y4T4T1_9BACT (Glycosyltransferase family 9 protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A7Y4T4T1_9BACT)

HSP 1 Score: 185 bits (470), Expect = 1.920e-53
Identity = 125/261 (47.89%), Postives = 155/261 (59.39%), Query Frame = 1
Query:    4 LSAPLLEGGGLVDHVFRVPRGQGLLGLGGYRAA---LGAAREHAWDLAIDLQRIAKSALLARLSGAPRVLGWDRVRAKEGAWLLVRERVARTDPHKHMVEQYADFARHLGLAPREPFGLLAREPGAAARWAAH---PWQGPVAVVNVGASTPQKRWAPERFGAVAAALAAA-GLHVVLTGNGADDRAAAGTALATAHAAGAPHVESLVDHTTLPELTELLARAELFVGCDTGPMHMAVSLGCRTLALFGTGRARRTGPYGA 765
            L+APL+ G   V+ V    RG      GG+R A   +G  R   + LA+DLQRI KSA++ARLSGAPRVLG  R R KE +W+   ERV       HM++QY D ARHLG   R P   L R+  AA  WA+       G   ++NVGAS P  RW PERFGA+A ALA   G+ V LTG+  DDR AA  ALA +     P V  L+  T+L +L  L  R+ LF+GCDTGPMH+A ++G   +ALFG     RTGPYGA
Sbjct:   54 LAAPLVVGHPCVERVHVWQRG------GGWREAARLVGEIRAERYGLAVDLQRIQKSAMVARLSGAPRVLGHVRARTKEASWVWTNERVPARGGPFHMLDQYLDIARHLGCDVRAPRRELPRD-AAAEAWASALVAELGGAPVLINVGASKPANRWEPERFGALAGALAGEDGVPVCLTGSP-DDRPAATRALAVS----GPRVRDLIGQTSLLQLVALTRRSRLFLGCDTGPMHVAAAVGTPVVALFGPADPVRTGPYGA 302          
BLAST of mRNA_M-pyrifera_M_contig77521.18245.1 vs. uniprot
Match: A0A523PE05_9BACT (Glycosyltransferase family 9 protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A523PE05_9BACT)

HSP 1 Score: 184 bits (466), Expect = 5.860e-53
Identity = 131/260 (50.38%), Postives = 154/260 (59.23%), Query Frame = 1
Query:    1 PLSAPLLEGGGLVDHVFRVPRGQGLLGLGGYRAALGAAREHAWDLAIDLQRIAKSALLARLSGAPRVLGWDRVRAKEGAWLLVRERVARTDPHKHMVEQYADFARHLGLAPREPFGLLAREPGAAARWA----AHPWQGPVAVVNVGASTPQKRWAPERFGAVAAALAAA-GLHVVLTGNGADDRAAAGTALATAHAAGAPH-VESLVDHTTLPELTELLARAELFVGCDTGPMHMAVSLGCRTLALFGTGRARRTGPYG 762
            PL+ PL++G   VD V  V R  G  GL   R  L   R   ++LA+DLQRI KSALLAR SGA RVLG+DR RAKE +WL  RER+       HMV+QY +F RHLGL           +P AAA WA    A     P+ +VN+GA+ P  RW PERFG +A  L       VVLTG G  DRAA   ALA   A    H V SLV  T+L +L  L+ARA LFVGCDTGPMH+A + G   +ALFG    RRTGPYG
Sbjct:   45 PLAQPLVDGHPCVDRVH-VWRRDG--GLAEARRVLREVRGEQYELALDLQRITKSALLARCSGAARVLGFDRGRAKEASWLWTRERIPPGSAAAHMVDQYLEFVRHLGLREARARRAFPPDPEAAA-WADGLVAELGGAPI-LVNLGATKPANRWPPERFGTLAGTLRRELDTPVVLTG-GETDRAAERRALA---ALDPEHGVRSLVGATSLRQLVALVARARLFVGCDTGPMHLAAACGTPVVALFGPADPRRTGPYG 295          
BLAST of mRNA_M-pyrifera_M_contig77521.18245.1 vs. uniprot
Match: A0A2D5B0Z2_9BACT (Lipopolysaccharide heptosyltransferase II n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A2D5B0Z2_9BACT)

HSP 1 Score: 184 bits (466), Expect = 8.650e-53
Identity = 124/260 (47.69%), Postives = 153/260 (58.85%), Query Frame = 1
Query:    1 PLSAPLLEGGGLVDHVFRVPRGQGLLGLGGYRAALGAAREHAWDLAIDLQRIAKSALLARLSGAPRVLGWDRVRAKEGAWLLVRERVARTDPHKHMVEQYADFARHLGLAPREPFGLLAREPG--AAARWAAH---PWQGPVAVVNVGASTPQKRWAPERFGAVAAALAA-AGLHVVLTGNGADDRAAAGTALATAHAAGAPHVESLVDHTTLPELTELLARAELFVGCDTGPMHMAVSLGCRTLALFGTGRARRTGPYG 762
            PL  PL+EG   VDHV    RG GL  L   R  +G  R   +DLA+DLQRI KSALLAR SGA R LG+DR RAKE +WL   ER+   DP  HMVE Y +FARHLG+   E  G L   P   AA RWA      +     ++N+GA+ P  RWAPER+G +A  L+  + + + L G G +DR +A  AL+   AA    V  LV  T LP+L  L  R  LFV  D+GPMH+A +LG   +ALFG    RRTGP+G
Sbjct:   52 PLVRPLVEGHPSVDHVHLWKRGGGLREL---RRLVGEVRGERYDLAVDLQRIQKSALLARFSGARRRLGYDRRRAKEFSWLWSSERIQSGDPIAHMVEHYLEFARHLGVGRAEREGDLHHLPAEPAAERWAEQRVGAFGAEPILLNLGATKPSNRWAPERWGELATCLSRESDIPLALVG-GPNDRESADRALSKCRAAA---VHDLVGKTDLPQLIALARRTRLFVTGDSGPMHIAAALGTPVVALFGAAEPRRTGPWG 304          
BLAST of mRNA_M-pyrifera_M_contig77521.18245.1 vs. uniprot
Match: A0A518BRH8_9BACT (MurG-like transferase n=1 Tax=Planctomycetes bacterium Pla133 TaxID=2528011 RepID=A0A518BRH8_9BACT)

HSP 1 Score: 180 bits (456), Expect = 1.370e-51
Identity = 119/257 (46.30%), Postives = 148/257 (57.59%), Query Frame = 1
Query:    4 LSAPLLEGGGLVDHVFRVPRGQGLLGLGGYRAALGAAREHAWDLAIDLQRIAKSALLARLSGAPRVLGWDRVRAKEGAWLLVRERVARTDPHKHMVEQYADFARHLGLAPREPFGLLAREPGAAARWA----AHPWQGPVAVVNVGASTPQKRWAPERFGAVAAALAAAGLHVVLTGNGADDRAAAGTALATAHAAGAPHVESLVDHTTLPELTELLARAELFVGCDTGPMHMAVSLGCRTLALFGTGRARRTGPYG 762
            L+ PL+EG   VD V    RG G+ GL  +   +G  R   +D+ +DLQRI KSAL+ARL GA R +G+DR RAKE +WLL  E +A  D    M+ Q  +FA HLG     P   L REP A A WA    A     P+AV NVGAS P  RW PERF  +A  LA  G  +VLTG G +DR     A A   AA    +  LV  T++P+L  L  R  L+VGCDTGPMH+A +   R +ALFG    +RTGP+G
Sbjct:   48 LALPLVEGHPWVDRVHLWKRGGGIAGLLSF---VGELRAERYDVVLDLQRILKSALVARLCGASRTVGYDRARAKELSWLLHSEHIAPGDRRAPMILQALEFAAHLGATDLTPMRELPREPEAEA-WAQALVAELGAAPIAV-NVGASKPPNRWVPERFAQLARTLAEHGHSIVLTG-GPEDR---DWAAAACGAADGARIRDLVGRTSIPQLVSLYRRLSLYVGCDTGPMHVAAACDVRCVALFGPADPQRTGPFG 295          
BLAST of mRNA_M-pyrifera_M_contig77521.18245.1 vs. uniprot
Match: A0A7C2BBH9_9BACT (Glycosyltransferase family 9 protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A7C2BBH9_9BACT)

HSP 1 Score: 175 bits (444), Expect = 1.770e-49
Identity = 128/260 (49.23%), Postives = 154/260 (59.23%), Query Frame = 1
Query:    1 PLSAPLLEGGGLVDHVFRVPRGQGLLGLGGYRAALGAAREHAWDLAIDLQRIAKSALLARLSGAPRVLGWDRVRAKEGAWLLVRERVARTDPHKHMVEQYADFARHLGLAPREPFGLLAREPGAAARWA----AHPWQGPVAVVNVGASTPQKRWAPERFGAVAAALAAA-GLHVVLTGNGADDRAAAGTALATAHAAGAPHVE-SLVDHTTLPELTELLARAELFVGCDTGPMHMAVSLGCRTLALFGTGRARRTGPYG 762
            PL+APL+     VD V    RG GL G   +R  L   R   + LA+DLQR+ KSALLARLSGAPRVLG+DR RAKE +WL  +ER+    PH+HMV+Q   FAR+LG+    P  +L  +P A   WA    A     P+ ++N+GAS     W   RFG +A AL       VVLTG G  DRAA G ALA   A G P  + S V  T L +L  L  R+ LFV  DTGPMHMAV++G  TLALFG    RRTGPYG
Sbjct:   59 PLAAPLVTRHPSVDRVHLWERGGGLAG---FRRVLREVRAVGYGLAVDLQRLQKSALLARLSGAPRVLGYDRARAKELSWLWSKERIPGGPPHEHMVDQVLGFARYLGIGAG-PRHVLPSDPDAE-EWAEGFVAGVGAAPI-LLNLGASKRANLWPAARFGELARALEREHDAPVVLTG-GPTDRAAEGEALA---AWGRPPRDASAVGRTDLLQLAALQRRSRLFVSADTGPMHMAVAVGLPTLALFGAADPRRTGPYG 308          
BLAST of mRNA_M-pyrifera_M_contig77521.18245.1 vs. uniprot
Match: A0A800MHZ0_9BACT (Lipopolysaccharide heptosyltransferase family protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A800MHZ0_9BACT)

HSP 1 Score: 156 bits (394), Expect = 3.020e-42
Identity = 112/263 (42.59%), Postives = 145/263 (55.13%), Query Frame = 1
Query:    1 PLSAPLLEGGGLVDHVFRVPRGQGLLGLGGYRAALGAAREHAWDLAIDLQRIAKSALLARLSGAPRVLGWDRVRAKEGAWLLVRERVARTDPHKHMVEQYADFARHLGLAPREPFGLLAREPGAAARWAAHPWQGPVAV---------VNVGASTPQKRWAPERFGAVAAALAAAGLHVVLTGNGADDRAAAGTALATAHAAGAPHVESLVDHTTLPELTELLARAELFVGCDTGPMHMAVSLGCRTLALFGTGRARRTGPYG 762
            PL  PL++G   VD V    R  GL      R  L   R   +DLAID QRI KSA+L+R+SGA R LG+D  R+KEG+WL   ER++ +    HMV+ Y +FA  LGL   +P   L  +P A + WA    +   +V         V++GAS    RWAPER+G +   L    L  V+   G+ DR  A  AL  A     P  + LV HT+LP+L  LL R  ++VGCDTGPMH+A +L C  +ALFG     RTGPYG
Sbjct:   53 PLCVPLVKGHPAVDRVHIFQRKGGLKEWLRLRREL---RAENYDLAIDAQRILKSAILSRMSGASRSLGFDPGRSKEGSWLFHSERISPSGG-THMVDWYLEFAEALGLKDPKPRRRLPVDPTAES-WATDFVRNLNSVSKSEVTPLCVHIGASKLANRWAPERYGELMLRLQEKSLGPVVLTGGSGDRMDADQALKVAQ----PD-QDLVGHTSLPQLISLLRRCRVWVGCDTGPMHLAAALNCPVVALFGPSEPARTGPYG 305          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig77521.18245.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2D6QBF0_9ARCH1.250e-5748.66Uncharacterized protein n=1 Tax=Candidatus Woesear... [more]
A0A518D433_9BACT7.420e-5650.39ADP-heptose--LPS heptosyltransferase 2 n=1 Tax=Pla... [more]
A0A800G485_9BACT2.510e-5548.65Glycosyltransferase family 9 protein n=1 Tax=Planc... [more]
A0A521K5F7_9BACT2.090e-5448.69Glycosyltransferase family 9 protein n=1 Tax=Planc... [more]
A0A7Y4T4T1_9BACT1.920e-5347.89Glycosyltransferase family 9 protein n=1 Tax=Planc... [more]
A0A523PE05_9BACT5.860e-5350.38Glycosyltransferase family 9 protein n=1 Tax=Planc... [more]
A0A2D5B0Z2_9BACT8.650e-5347.69Lipopolysaccharide heptosyltransferase II n=1 Tax=... [more]
A0A518BRH8_9BACT1.370e-5146.30MurG-like transferase n=1 Tax=Planctomycetes bacte... [more]
A0A7C2BBH9_9BACT1.770e-4949.23Glycosyltransferase family 9 protein n=1 Tax=Planc... [more]
A0A800MHZ0_9BACT3.020e-4242.59Lipopolysaccharide heptosyltransferase family prot... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig77521contigM-pyrifera_M_contig77521:236..1006 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score141.0
Seed ortholog evalue7.9e-31
Seed eggNOG ortholog177437.HRM2_18300
Preferred namerfaF
KEGG rclassRC00009,RC00077,RC00247
KEGG koko:K02527,ko:K02841,ko:K02843,ko:K12982
KEGG ReactionR04658,R05074,R09763
KEGG Pathwayko00540,ko01100,map00540,map01100
KEGG ModuleM00060,M00080
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Glycosyltransferase family 9 (heptosyltransferase)
EggNOG OGs1MYZA@1224,2MI8V@213118,2WKA9@28221,43AFG@68525,COG0859@1,COG0859@2
EC2.4.99.12,2.4.99.13,2.4.99.14,2.4.99.15
COG Functional cat.M
CAZyGT30,GT9
Best tax levelDesulfobacterales
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01003,ko01005
Exons1
Model size771
Cds size771
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816676.0294652-CDS-M-pyrifera_M_contig77521:235..10061622816676.0294652-CDS-M-pyrifera_M_contig77521:235..1006Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig77521 236..1006 -
1692278113.0873606-CDS-M-pyrifera_M_contig77521:235..10061692278113.0873606-CDS-M-pyrifera_M_contig77521:235..1006Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig77521 236..1006 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig77521.18245.1prot_M-pyrifera_M_contig77521.18245.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig77521 236..1006 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig77521.18245.1

>prot_M-pyrifera_M_contig77521.18245.1 ID=prot_M-pyrifera_M_contig77521.18245.1|Name=mRNA_M-pyrifera_M_contig77521.18245.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=257bp
PLSAPLLEGGGLVDHVFRVPRGQGLLGLGGYRAALGAAREHAWDLAIDLQ
RIAKSALLARLSGAPRVLGWDRVRAKEGAWLLVRERVARTDPHKHMVEQY
ADFARHLGLAPREPFGLLAREPGAAARWAAHPWQGPVAVVNVGASTPQKR
WAPERFGAVAAALAAAGLHVVLTGNGADDRAAAGTALATAHAAGAPHVES
LVDHTTLPELTELLARAELFVGCDTGPMHMAVSLGCRTLALFGTGRARRT
GPYGARA
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mRNA from alignment at M-pyrifera_M_contig77521:236..1006-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig77521.18245.1 ID=mRNA_M-pyrifera_M_contig77521.18245.1|Name=mRNA_M-pyrifera_M_contig77521.18245.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=771bp|location=Sequence derived from alignment at M-pyrifera_M_contig77521:236..1006- (Macrocystis pyrifera P11B4 male)
CCGCTCTCGGCGCCGCTGCTCGAGGGCGGCGGGCTGGTGGACCACGTCTT CCGCGTGCCGCGCGGACAAGGTCTGCTCGGCCTCGGCGGGTACCGTGCCG CGCTCGGGGCCGCGCGCGAGCACGCGTGGGACCTCGCCATCGATCTGCAG CGGATCGCCAAGAGCGCGCTGCTCGCGCGCCTGAGCGGCGCGCCGCGCGT GCTGGGTTGGGACCGCGTGCGGGCCAAGGAAGGCGCGTGGCTGCTGGTCC GCGAGCGCGTCGCGCGCACCGATCCGCACAAGCACATGGTCGAGCAGTAC GCCGACTTCGCGCGCCATCTGGGCCTCGCACCGCGCGAGCCCTTCGGCTT GTTGGCGCGCGAACCCGGCGCCGCGGCGCGCTGGGCCGCGCACCCTTGGC AAGGCCCGGTCGCCGTCGTCAACGTCGGCGCGAGCACGCCCCAGAAGCGC TGGGCGCCCGAGCGCTTCGGCGCCGTCGCCGCGGCCCTCGCCGCCGCAGG TCTGCACGTCGTCCTGACCGGCAACGGCGCGGACGACCGCGCCGCCGCCG GTACCGCCCTCGCCACCGCGCACGCCGCCGGCGCGCCGCACGTCGAGAGC CTGGTCGACCACACGACGCTCCCCGAGCTCACCGAGCTGCTCGCCCGCGC CGAGCTGTTCGTCGGTTGCGACACGGGCCCGATGCACATGGCGGTCAGCC TGGGCTGCCGCACGCTCGCGCTCTTTGGCACGGGCCGCGCGCGGCGCACC GGTCCGTATGGAGCGCGCGCC
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig77521:236..1006-

>mRNA_M-pyrifera_M_contig77521.18245.1 ID=mRNA_M-pyrifera_M_contig77521.18245.1|Name=mRNA_M-pyrifera_M_contig77521.18245.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1542bp|location=Sequence derived from alignment at M-pyrifera_M_contig77521:236..1006- (Macrocystis pyrifera P11B4 male)
CCGCTCTCGGCGCCGCTGCTCGAGGGCGGCGGGCTGGTGGACCACGTCTT
CCGCGTGCCGCGCGGACAAGGTCTGCTCGGCCTCGGCGGGTACCGTGCCG
CGCTCGGGGCCGCGCGCGAGCACGCGTGGGACCTCGCCATCGATCTGCAG
CGGATCGCCAAGAGCGCGCTGCTCGCGCGCCTGAGCGGCGCGCCGCGCGT
GCTGGGTTGGGACCGCGTGCGGGCCAAGGAAGGCGCGTGGCTGCTGGTCC
GCGAGCGCGTCGCGCGCACCGATCCGCACAAGCACATGGTCGAGCAGTAC
GCCGACTTCGCGCGCCATCTGGGCCTCGCACCGCGCGAGCCCTTCGGCTT
GTTGGCGCGCGAACCCGGCGCCGCGGCGCGCTGGGCCGCGCACCCTTGGC
AAGGCCCGGTCGCCGTCGTCAACGTCGGCGCGAGCACGCCCCAGAAGCGC
TGGGCGCCCGAGCGCTTCGGCGCCGTCGCCGCGGCCCTCGCCGCCGCAGG
TCTGCACGTCGTCCTGACCGGCAACGGCGCGGACGACCGCGCCGCCGCCG
GTACCGCCCTCGCCACCGCGCACGCCGCCGGCGCGCCGCACGTCGAGAGC
CTGGTCGACCACACGACGCTCCCCGAGCTCACCGAGCTGCTCGCCCGCGC
CGAGCTGTTCGTCGGTTGCGACACGGGCCCGATGCACATGGCGGTCAGCC
TGGGCTGCCGCACGCTCGCGCTCTTTGGCACGGGCCGCGCGCGGCGCACC
GGTCCGTATGGAGCGCGCGCCCCGCTCTCGGCGCCGCTGCTCGAGGGCGG
CGGGCTGGTGGACCACGTCTTCCGCGTGCCGCGCGGACAAGGTCTGCTCG
GCCTCGGCGGGTACCGTGCCGCGCTCGGGGCCGCGCGCGAGCACGCGTGG
GACCTCGCCATCGATCTGCAGCGGATCGCCAAGAGCGCGCTGCTCGCGCG
CCTGAGCGGCGCGCCGCGCGTGCTGGGTTGGGACCGCGTGCGGGCCAAGG
AAGGCGCGTGGCTGCTGGTCCGCGAGCGCGTCGCGCGCACCGATCCGCAC
AAGCACATGGTCGAGCAGTACGCCGACTTCGCGCGCCATCTGGGCCTCGC
ACCGCGCGAGCCCTTCGGCTTGTTGGCGCGCGAACCCGGCGCCGCGGCGC
GCTGGGCCGCGCACCCTTGGCAAGGCCCGGTCGCCGTCGTCAACGTCGGC
GCGAGCACGCCCCAGAAGCGCTGGGCGCCCGAGCGCTTCGGCGCCGTCGC
CGCGGCCCTCGCCGCCGCAGGTCTGCACGTCGTCCTGACCGGCAACGGCG
CGGACGACCGCGCCGCCGCCGGTACCGCCCTCGCCACCGCGCACGCCGCC
GGCGCGCCGCACGTCGAGAGCCTGGTCGACCACACGACGCTCCCCGAGCT
CACCGAGCTGCTCGCCCGCGCCGAGCTGTTCGTCGGTTGCGACACGGGCC
CGATGCACATGGCGGTCAGCCTGGGCTGCCGCACGCTCGCGCTCTTTGGC
ACGGGCCGCGCGCGGCGCACCGGTCCGTATGGAGCGCGCGCC
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