mRNA_M-pyrifera_M_contig7731.18214.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig7731.18214.1 vs. uniprot
Match: D8LR49_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LR49_ECTSI) HSP 1 Score: 314 bits (804), Expect = 4.230e-92 Identity = 146/162 (90.12%), Postives = 153/162 (94.44%), Query Frame = 1 Query: 16 RLRLVESNGYTCSRCKWMEGCVGCFIPPDDQPCQVRPGDSVAVDWHISVIKEHYDASEAMSCLLHSSIAIHKDVEARPLSLEKCLDTFTQQEDIKEGYCSRCKDFRSASKKMDVWRLPPILAIQLKRFQYTQYSRRKLRNNVHFPVNGLDLSPYVVKDPGTG 501 RLRLVESNGY CSRC+W EGCVGCFI PDD PC VR GDSV VDWHISVIKEHYDASEA+SCLLHSSIA+HKD+EARPLSLEKCLDTFT QEDIKEGYCSRCK+FR+ASKKMDVWRLPPILAIQLKRFQYTQYSRRKLRNNVHFPVNGLDLSPYVVKDP +G Sbjct: 1517 RLRLVESNGYACSRCRWTEGCVGCFIRPDDTPCPVRAGDSVGVDWHISVIKEHYDASEALSCLLHSSIALHKDLEARPLSLEKCLDTFTAQEDIKEGYCSRCKEFRNASKKMDVWRLPPILAIQLKRFQYTQYSRRKLRNNVHFPVNGLDLSPYVVKDPASG 1678
BLAST of mRNA_M-pyrifera_M_contig7731.18214.1 vs. uniprot
Match: A0A6H5KLB3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLB3_9PHAE) HSP 1 Score: 313 bits (801), Expect = 1.090e-91 Identity = 145/162 (89.51%), Postives = 153/162 (94.44%), Query Frame = 1 Query: 16 RLRLVESNGYTCSRCKWMEGCVGCFIPPDDQPCQVRPGDSVAVDWHISVIKEHYDASEAMSCLLHSSIAIHKDVEARPLSLEKCLDTFTQQEDIKEGYCSRCKDFRSASKKMDVWRLPPILAIQLKRFQYTQYSRRKLRNNVHFPVNGLDLSPYVVKDPGTG 501 RLRLVESNGY CSRC+W EGCVGCFI PDD+PC VR GDSV VDWHISVIKEHYD SEA+SCLLHSSIA+HKD+EARPLSLEKCLDTFT QEDIKEGYCSRCK+FR+ASKKMDVWRLPPILAIQLKRFQYTQYSRRKLRNNVHFPVNGLDLSPYVVKDP +G Sbjct: 1688 RLRLVESNGYACSRCRWTEGCVGCFIRPDDKPCPVRAGDSVGVDWHISVIKEHYDPSEALSCLLHSSIALHKDLEARPLSLEKCLDTFTAQEDIKEGYCSRCKEFRNASKKMDVWRLPPILAIQLKRFQYTQYSRRKLRNNVHFPVNGLDLSPYVVKDPASG 1849
BLAST of mRNA_M-pyrifera_M_contig7731.18214.1 vs. uniprot
Match: A0A835YVN1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVN1_9STRA) HSP 1 Score: 222 bits (565), Expect = 3.030e-60 Identity = 96/160 (60.00%), Postives = 127/160 (79.38%), Query Frame = 1 Query: 16 RLRLVESNGYTCSRCKWMEGCVGCFIPPDDQPCQVRPGDSVAVDWHISVIKEHYDASEAMSCLLHSSIAIHKDVEARPLSLEKCLDTFTQQEDIKEGYCSRCKDFRSASKKMDVWRLPPILAIQLKRFQYTQYSRRKLRNNVHFPVNGLDLSPYVVKDPG 495 RLRLV +G CSRC W+ GC+GCFIPP+D P +R GD+VAVDWH++V++E YDA++AM+C+ H S+A E++P+SL++CL+TFT +E I EGYCSRCK+ R + +M +WRLPP+L IQLKRFQYT YSRRKLRN V FP+ GLDLSP+++ PG Sbjct: 1560 RLRLVTYDGRACSRCPWLSGCLGCFIPPNDSPAGIRDGDTVAVDWHMTVMRERYDAAQAMACVNHPSVAAALRSESQPMSLQRCLETFTAEETIPEGYCSRCKELRETNMRMGLWRLPPVLVIQLKRFQYTAYSRRKLRNLVDFPIRGLDLSPFLLNKPG 1719
BLAST of mRNA_M-pyrifera_M_contig7731.18214.1 vs. uniprot
Match: A0A2D4BEQ6_PYTIN (USP domain-containing protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BEQ6_PYTIN) HSP 1 Score: 164 bits (415), Expect = 6.140e-42 Identity = 76/157 (48.41%), Postives = 105/157 (66.88%), Query Frame = 1 Query: 19 LRLVESNGYTCSRCKWMEGCVGCFIPPDDQP-CQVRPGDSVAVDWHISVIKEHYDASEAMSCLLHSSIAIHKDVEARPLSLEKCLDTFTQQEDIKEGYCSRCKDFRSASKKMDVWRLPPILAIQLKRFQYTQYSRRKLRNNVHFPVNGLDLSPYVVK 486 LRLV S+G CSRC+W++GC+GC +PP + +++A+DW I +K+ YD +A H ++A + ++ PL++ +CLD FT +E I E YC RCK R+A+K MD+WRLPP+L IQLKRF YTQ SRRKL + V FP+ GL L YV K Sbjct: 164 LRLVTSHGVGCSRCEWLDGCLGCVLPPSPSSRLPLSAEETIAIDWDIRTLKDEYDPIQASKLDTHDAVATNHRLDNMPLNIYRCLDIFTAKEHISEAYCGRCKTHRAATKTMDLWRLPPLLVIQLKRFCYTQTSRRKLHHFVDFPLTGLRLEDYVAK 320
BLAST of mRNA_M-pyrifera_M_contig7731.18214.1 vs. uniprot
Match: A0A418CX72_9STRA (USP domain-containing protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A418CX72_9STRA) HSP 1 Score: 162 bits (409), Expect = 9.790e-42 Identity = 80/164 (48.78%), Postives = 107/164 (65.24%), Query Frame = 1 Query: 19 LRLVESNGYTCSRCKWMEGCVGCFIPPD-DQPCQVRPGDSVAVDWHISVIKEHYDASEAMSCLLHSSIAIHKDVEARPLSLEKCLDTFTQQEDIKEGYCSRCKDFRSASKKMDVWRLPPILAIQLKRFQYTQYSRRKLRNNVHFPVNGLDLSPYVVKD-PGTGV 504 LRLV +G CSRC W+ GC GC + D QV +++A+DW I + E YDA+EA +H+S V+A LSL+ CL FT E + E YCSRCK A+KKMD+WR+PP+L IQLKRFQYT SR+KLR+ V FP+ GLDL+ ++V+ P +G+ Sbjct: 146 LRLVTMDGMACSRCPWLSGCRGCLVSSHPDALLQVCGRETIAIDWDIQTMAEDYDATEASKVQVHASFEKQAKVQAAVLSLQSCLKDFTASEPLDEAYCSRCKALTPAAKKMDLWRVPPLLVIQLKRFQYTATSRKKLRHLVQFPLKGLDLTEFLVRSSPDSGL 309
BLAST of mRNA_M-pyrifera_M_contig7731.18214.1 vs. uniprot
Match: K3WLF0_GLOUD (Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WLF0_GLOUD) HSP 1 Score: 167 bits (422), Expect = 1.740e-41 Identity = 79/157 (50.32%), Postives = 106/157 (67.52%), Query Frame = 1 Query: 19 LRLVESNGYTCSRCKWMEGCVGCFI-PPDDQPCQVRPGDSVAVDWHISVIKEHYDASEAMSCLLHSSIAIHKDVEARPLSLEKCLDTFTQQEDIKEGYCSRCKDFRSASKKMDVWRLPPILAIQLKRFQYTQYSRRKLRNNVHFPVNGLDLSPYVVK 486 LR+V S+G CSRC+W+EGC+GC I P +P Q+ +++A+DW I +KE YD +A +S+ +K + PLS+E C+D FT +E I+E YC RCK R A+K MD+WRLPP+L IQLKRF YTQ SRRKL + V FP+ GL L +V K Sbjct: 578 LRMVTSHGTGCSRCEWLEGCLGCLILPSPHEPLQLTAEETIAIDWDIRTLKEEYDPIQASKLDFDNSVQHNKRQDNMPLSIEHCMDMFTAKERIQEAYCGRCKTLRPATKTMDLWRLPPLLVIQLKRFCYTQVSRRKLHHLVDFPLRGLQLENFVAK 734
BLAST of mRNA_M-pyrifera_M_contig7731.18214.1 vs. uniprot
Match: A0A5D6XSD2_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XSD2_9STRA) HSP 1 Score: 165 bits (418), Expect = 7.830e-41 Identity = 77/157 (49.04%), Postives = 108/157 (68.79%), Query Frame = 1 Query: 19 LRLVESNGYTCSRCKWMEGCVGCFIPPDDQPC-QVRPGDSVAVDWHISVIKEHYDASEAMSCLLHSSIAIHKDVEARPLSLEKCLDTFTQQEDIKEGYCSRCKDFRSASKKMDVWRLPPILAIQLKRFQYTQYSRRKLRNNVHFPVNGLDLSPYVVK 486 LRLV ++G CSRC+W++GC+GC I P Q +V +++A+DW I +KE YD +A + +S+ +K + PLS+E+C+D FT +E I+E YC RC+ R A+K MD+WRLPP+L IQLKRF YTQ SRRKL ++V FP+ GL L +V K Sbjct: 1357 LRLVTASGGGCSRCEWLDGCLGCLILPSPQRALEVTAEETIAIDWDIRTLKEEYDPIQASKLDVDASVQANKRQDNMPLSIERCMDMFTAKERIQEAYCGRCRTHRPATKTMDLWRLPPLLVIQLKRFCYTQVSRRKLHHHVDFPLRGLQLEAFVAK 1513
BLAST of mRNA_M-pyrifera_M_contig7731.18214.1 vs. uniprot
Match: F0VYX5_9STRA (Ubiquitinspecific protease putative n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0VYX5_9STRA) HSP 1 Score: 164 bits (414), Expect = 2.650e-40 Identity = 76/156 (48.72%), Postives = 104/156 (66.67%), Query Frame = 1 Query: 19 LRLVESNGYTCSRCKWMEGCVGCFIPPDDQPCQVRPGDSVAVDWHISVIKEHYDASEAMSCLLHSSIAIHKDVEARPLSLEKCLDTFTQQEDIKEGYCSRCKDFRSASKKMDVWRLPPILAIQLKRFQYTQYSRRKLRNNVHFPVNGLDLSPYVVK 486 LR+V S G++CSRC W++ C+GC I P V +++A+DW + +KE YD EA + + +SI ++ + PL+L++CL+ FT QE I E YC RCK R A+K MD WRLPPIL I LKRF YTQ SRRKL + V FP+ GLD++ +V K Sbjct: 1438 LRMVTSAGHSCSRCAWLDACLGCLIVPSQDRISVTAEETIAMDWDTASLKEEYDPLEASTMITDASIEHNRQKDQGPLTLDQCLNIFTAQEHINEAYCGRCKALRPANKTMDFWRLPPILVIHLKRFCYTQVSRRKLYHFVDFPLTGLDMTKFVAK 1593
BLAST of mRNA_M-pyrifera_M_contig7731.18214.1 vs. uniprot
Match: A0A067CKF0_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CKF0_SAPPC) HSP 1 Score: 163 bits (413), Expect = 3.330e-40 Identity = 77/157 (49.04%), Postives = 105/157 (66.88%), Query Frame = 1 Query: 19 LRLVESNGYTCSRCKWMEGCVGCFIPPDDQP-CQVRPGDSVAVDWHISVIKEHYDASEAMSCLLHSSIAIHKDVEARPLSLEKCLDTFTQQEDIKEGYCSRCKDFRSASKKMDVWRLPPILAIQLKRFQYTQYSRRKLRNNVHFPVNGLDLSPYVVK 486 LR+V ++G CSRC W+EGC GC +P DD Q+ +++A+DW I+ + E YD+ EA ++H S +K V PLSL CL FT E + E +C RCK ++KKMD+WRLPP+L +QLKRFQYT S++KLR VHFP+ GLDL+ +VK Sbjct: 1088 LRMVTTDGLACSRCDWLEGCRGCLVPSDDVAHVQMCGRETLAIDWDIATMTEVYDSGEASKVVVHPSYHTYKAVVDAPLSLASCLLEFTASEPMDEAFCGRCKALSPSTKKMDLWRLPPLLVVQLKRFQYTSSSKKKLRQLVHFPLRGLDLADVLVK 1244
BLAST of mRNA_M-pyrifera_M_contig7731.18214.1 vs. uniprot
Match: A0A3L6VYB4_9STRA (Ubiquitin carboxyl-terminal hydrolase (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3L6VYB4_9STRA) HSP 1 Score: 162 bits (409), Expect = 4.560e-40 Identity = 80/164 (48.78%), Postives = 107/164 (65.24%), Query Frame = 1 Query: 19 LRLVESNGYTCSRCKWMEGCVGCFIPPD-DQPCQVRPGDSVAVDWHISVIKEHYDASEAMSCLLHSSIAIHKDVEARPLSLEKCLDTFTQQEDIKEGYCSRCKDFRSASKKMDVWRLPPILAIQLKRFQYTQYSRRKLRNNVHFPVNGLDLSPYVVKD-PGTGV 504 LRLV +G CSRC W+ GC GC + D QV +++A+DW I + E YDA+EA +H+S V+A LSL+ CL FT E + E YCSRCK A+KKMD+WR+PP+L IQLKRFQYT SR+KLR+ V FP+ GLDL+ ++V+ P +G+ Sbjct: 498 LRLVTMDGMACSRCPWLSGCRGCLVSSHPDALLQVCGRETIAIDWDIQTMAEDYDATEASKVQVHASFEKQAKVQAAVLSLQSCLKDFTASEPLDEAYCSRCKALTPAAKKMDLWRVPPLLVIQLKRFQYTATSRKKLRHLVQFPLKGLDLTEFLVRSSPDSGL 661 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig7731.18214.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig7731.18214.1 >prot_M-pyrifera_M_contig7731.18214.1 ID=prot_M-pyrifera_M_contig7731.18214.1|Name=mRNA_M-pyrifera_M_contig7731.18214.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=416bp MCVLVRLRLVESNGYTCSRCKWMEGCVGCFIPPDDQPCQVRPGDSVAVDWback to top mRNA from alignment at M-pyrifera_M_contig7731:846..6686+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig7731.18214.1 ID=mRNA_M-pyrifera_M_contig7731.18214.1|Name=mRNA_M-pyrifera_M_contig7731.18214.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=5841bp|location=Sequence derived from alignment at M-pyrifera_M_contig7731:846..6686+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig7731:846..6686+ >mRNA_M-pyrifera_M_contig7731.18214.1 ID=mRNA_M-pyrifera_M_contig7731.18214.1|Name=mRNA_M-pyrifera_M_contig7731.18214.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=2496bp|location=Sequence derived from alignment at M-pyrifera_M_contig7731:846..6686+ (Macrocystis pyrifera P11B4 male)back to top |