mRNA_M-pyrifera_M_contig7719.18193.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig7719.18193.1
Unique NamemRNA_M-pyrifera_M_contig7719.18193.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
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BLAST of mRNA_M-pyrifera_M_contig7719.18193.1 vs. uniprot
Match: D7FZM1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZM1_ECTSI)

HSP 1 Score: 433 bits (1114), Expect = 1.810e-147
Identity = 205/269 (76.21%), Postives = 227/269 (84.39%), Query Frame = 1 
Query:    1 APSQCSNGMPGVSDGTVCCKEACGACGGEGCGAVVGTNGASDCCPSTIIEEAAGEVCGEAPCVMEGFTPSPVNPAFDGTVAPFDPSTCANGIAGYQDGDICCLESCGQCGGAGCGTIPGTGGAANCCPTTIRESGVVCGEAPCIMEGYTPAPAVVGGGTAAPIGSSTCSNGVLGFQDGAACCAANCGQCGGEGCGAIPGTAGSAACCSSIVLAESPSCDITNESPCVIEGYTPAPVVTELGSAAPVVPGTCSNGMPGYQDLDVCCLEVG 807
            APS CSNG+PGVSDG VCC EACG CGGEGCGA+ GTNGASDCCP TI EE+ G  CGEAPCVM GFTPSP+NPAFDGT AP  PSTC+NGIAGYQDG ICCLE CG+CGG GCGTIPGTGG+ NCCP+TI  +GVVCGEAPCI+EGYTPAPAVVGGGT AP G+STCSNG+LG+QDG ACCAANCGQCGG GCG++PGTAG++ACCSS V      C  T  SPCVI+ YTPAPVV + GSAAPVVP  CSNG+PGYQ+ D+CCLE G
Sbjct:  288 APSTCSNGIPGVSDGDVCCLEACGQCGGEGCGAIAGTNGASDCCPDTIKEESGGVFCGEAPCVMAGFTPSPLNPAFDGTAAPVAPSTCSNGIAGYQDGAICCLEICGRCGGDGCGTIPGTGGSDNCCPSTILAAGVVCGEAPCIIEGYTPAPAVVGGGTTAPYGTSTCSNGILGYQDGPACCAANCGQCGGGGCGSVPGTAGASACCSSDVELAGNLCSATGVSPCVIDNYTPAPVVPDYGSAAPVVPSNCSNGLPGYQNNDICCLESG 556
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BLAST of mRNA_M-pyrifera_M_contig7719.18193.1 vs. uniprot
Match: A0A6H5JSA0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSA0_9PHAE)

HSP 1 Score: 225 bits (574), Expect = 3.500e-71
Identity = 104/137 (75.91%), Postives = 114/137 (83.21%), Query Frame = 1 
Query:    1 APSQCSNGMPGVSDGTVCCKEACGACGGEGCGAVVGTNGASDCCPSTIIEEAAGEVCGEAPCVMEGFTPSPVNPAFDGTVAPFDPSTCANGIAGYQDGDICCLESCGQCGGAGCGTIPGTGGAANCCPTTIRESGVV 411
            +PS CSNG+PGVSDG VCC EACG CGG GCGA+ GTNGASDCCP TI EE+ G  CGEAPCVMEGFTPSP+NPA DGT AP  PSTC+NGI GYQDG ICCLE CG+CGG GCGTIPGTGG+ NCCP+ I  +GVV
Sbjct:    2 SPSTCSNGIPGVSDGEVCCLEACGQCGGVGCGAIAGTNGASDCCPDTIKEESGGVFCGEAPCVMEGFTPSPLNPALDGTAAPVAPSTCSNGIPGYQDGVICCLEICGRCGGDGCGTIPGTGGSDNCCPSDILAAGVV 138
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BLAST of mRNA_M-pyrifera_M_contig7719.18193.1 vs. uniprot
Match: D7FJ68_ECTSI (WSC domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJ68_ECTSI)

HSP 1 Score: 159 bits (402), Expect = 1.930e-40
Identity = 112/318 (35.22%), Postives = 136/318 (42.77%), Query Frame = 1 
Query:   13 CSNGMPGVSDGTVCCKEACGACGGEGCGAVVGTNGASDCCPSTIIEEAAGEVCG---EAPCVMEGFTPSP--------------------------VNPAFDGTVAPFDPSTCANGIAGYQDGDICCLESCGQCGGAGCGTIPGTGGAANCCPTTIRESGVVCG---EAPCIMEGYTPAPAVVGGGTAAPIG------------------SSTCSNGVLGFQDGAACCAANCGQCGGEGCGAIPGTAGSAACCSSIVLAESPSCDITNESPCVIEGYTPAPVVTELGSAAPVVPGTCSNGMPGYQDLDVCCL-EVGDC 813
            CSNG PG+  G  CC   CGACGG  C    G  GA +CC S I+E   GE+C    EAPC ++   P+P                                    P D   C+NGI G Q G  CCL  C  CGG+GC    G  GA NCC   I E+G +C    +APC+++   PAP+ V   TA                      +  CSNG  G Q G ACC A CG CGG  C    G  G+  CC S ++     C I  E+PC I+                    TCSNG+PG Q  + CCL E G C
Sbjct:  784 CSNGFPGIQSGNACCLAECGACGGSDCDEFGGGLGADNCCESDIVEH--GELCSIALEAPCYIDDAAPAPSPVVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPTD--VCSNGIPGVQSGFACCLAECVACGGSGCDEFGGGLGADNCCEGNIEENGELCSITLQAPCVVDDSAPAPSPVAEPTAXXXXXXXXXXXXXXXXXXXXXXTDMCSNGFPGIQSGNACCLAECGACGGSDCDEFGGGLGADNCCVSDIVEHGELCSIALEAPCYIDE-------------------TCSNGIPGIQTGNACCLAECGAC 1078
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BLAST of mRNA_M-pyrifera_M_contig7719.18193.1 vs. uniprot
Match: D7FJ69_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJ69_ECTSI)

HSP 1 Score: 124 bits (311), Expect = 2.050e-31
Identity = 78/182 (42.86%), Postives = 98/182 (53.85%), Query Frame = 1 
Query:  163 EVCGEAPCVMEGFTPSPVNPAFDGTVAPFDPST--CANGIAGYQDGDICCLESCGQCGGAGCGTIPGTGGAANCCPTTIRESGVVCG---EAPCIMEGYTPAPAVVGGGTAAPIGSST--CSNGVLGFQDGAACCAANCGQCGGEGCGAIPGTAGSAACCSSIVLAESPSCDITNESPCVIE 687
            ++ G APCV+ G+ P+P   A    VAP    T  C+NGI G Q G  CCL  CG CGG+GC  + G  G  NCC   I E G +C    EAPC+++   PAP+ V     AP+   T  CSNG  G Q G +CC A CG+CGG GCG   G  G+  CC S +      C I   +PC I+
Sbjct:    3 DIFGSAPCVL-GYAPAPTPVAEP--VAPVTEPTDVCSNGIPGVQSGVSCCLAECGGCGGSGCAELGGGLGEHNCCEGEIEEFGELCSIKLEAPCVVDASAPAPSPVAE-PVAPVTEPTDVCSNGFPGIQSGVSCCLAECGECGGRGCGEFGGGLGADKCCESDIEEYGELCSIALAAPCYID 180
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BLAST of mRNA_M-pyrifera_M_contig7719.18193.1 vs. uniprot
Match: A0A6H5K7R2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7R2_9PHAE)

HSP 1 Score: 119 bits (297), Expect = 6.590e-27
Identity = 75/157 (47.77%), Postives = 85/157 (54.14%), Query Frame = 1 
Query:   13 CSNGMPGVSD--GTVCCKEACGACGGEGCGAVVGTNGASDCCPSTI-IEEAAGEVCGEAPCVMEGFTPSPVNPAFDGTVAPFDPSTCANGIAGYQDGDICCLESC-GQCGGAGCGTIPGTGGAANCCPTTIRESGVVCGE---APCIMEG--YTPAP 456
            CSNG+ G+ D    +CC  ACG CGG GCG V G  G  DCC   I +      V  EAPCVM+                 F  STC NG+AG QDG +CC E C G CGG GCG+I GT GA +CC  TI  +GV C E   APCIM    YT AP
Sbjct:  177 CSNGIVGIEDPVNLICCDAACGLCGGPGCGNVTGLTGL-DCCSEEIAVVNDLCSVTNEAPCVMDP--------------PDFVASTCPNGLAGVQDGSVCCAEECNGVCGGEGCGSIVGTNGAEDCCSNTILATGVDCEEGVMAPCIMLNGTYTDAP 318
[Close]
BLAST of mRNA_M-pyrifera_M_contig7719.18193.1 vs. uniprot
Match: A0A6H5JG29_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JG29_9PHAE)

HSP 1 Score: 95.9 bits (237), Expect = 1.470e-18
Identity = 89/309 (28.80%), Postives = 113/309 (36.57%), Query Frame = 1 
Query:  106 GTNGASDCCPSTIIEEAAGEVC---GEAPCVMEGFTPSPVNPAFDGTVAPFDPSTCANGIAG---------------------------YQDGDICCLESCGQCGGAGCGTIPGTGGAANCCPTTIRESGVVCG---EAPCIMEGYTPAPA--------------------------------VVGGGTAAPIG-------SSTCSNGVLGFQDGAACCAANCGQCGGEGCGAIPGTAGSAACCSSIVLAESPSCDITNESPCVIEGYTPAPVVTELGSAAPVVPGTCSNGMPGYQDLDVCCL-EVGDC 813
            G + A +CC  TI++   G++C   G APCV+ G    P +     +V+  D         G                              G+ CCL  CG CGG  C  + G  GA NCC + I E G +C    EAPC ++G                                      +V  G    I           CSNG  G Q G ACC A CG CGG  C A+ G  G+  CC S ++     C I  E+PC +E                    TCSNG PG Q  + CCL E G C
Sbjct:  166 GPDPAVECCADTIVDN--GQMCDDVGSAPCVIGG---QPAHKVSLASVSNLDDYLFRRPPGGSIPEPTXXXXXXXXXXXXXXXXXXXXXXXXGNACCLAECGGCGGLDCDALGGGLGAENCCESRIVEHGELCSIALEAPCYIDGEMNGVGNACCLAECGXXXXXXXXXXXXXXXXXXXCESDIVERGEICSIALEAPCYLEDMCSNGFPGIQSGNACCLAECGGCGGSDCDALGGGLGAENCCESDIVERGELCSIALEAPCYLED-------------------TCSNGFPGIQSGNACCLAECGGC 450
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BLAST of mRNA_M-pyrifera_M_contig7719.18193.1 vs. uniprot
Match: D7FZM0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZM0_ECTSI)

HSP 1 Score: 89.4 bits (220), Expect = 1.680e-18
Identity = 44/76 (57.89%), Postives = 54/76 (71.05%), Query Frame = 1 
Query:  253 PSTCANGIAGYQDGDICCLESCGQCGGAGCGTIPGTGGAANCCPTTIRESGVVCGE---APCIMEGY---TPAPAV 462
            PSTC+NG+ GYQDG  CCL +CG CGG GCG++ GT GA++CCP+TI  S  VCG    APCI+      TPAPA+
Sbjct:    4 PSTCSNGLPGYQDGQACCLMNCGLCGGDGCGSVNGTAGASDCCPSTIINSARVCGGDIVAPCIIPATPAPTPAPAL 79
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BLAST of mRNA_M-pyrifera_M_contig7719.18193.1 vs. uniprot
Match: D8LTF3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTF3_ECTSI)

HSP 1 Score: 90.1 bits (222), Expect = 1.150e-16
Identity = 101/298 (33.89%), Postives = 115/298 (38.59%), Query Frame = 1 
Query:   25 MPGVSD--GTVCCKEACGACGGEGCGAV--------------VGTNGASDCCPSTIIEEAAGEVCGEAPCVMEGFTPSPVNPAFDGTV-APFDPSTCAN--------GIAGYQD--GDICCLESCGQCGGAGCGTI------PGTGGAAN--------CCPTTIRESGVVCGEAPCIMEGYTPAPAVVGGGTAAPIGSSTCS-NGVLGFQD-GAACCAANCGQCGGEGCGAIP--------------GTAGSAACCSSIVLAESPSCDITNESPCVIEGYTPAPVVTELGSAAPVVPG 747
            +PG+ D  GT CC + CG CGG GCG V              +       CC S +  +     CG      EG+ P  + PA  GTV A   P   +N        GI G  D  G  CC + CG CGG GCG I      P   G           CC + +    V CG      EGY P          A     TC   GV G  D G  CC   CGQCGGEGCGAIP               TA S  C  + V  E    D   E PC+I   T  P V     AAPV  G
Sbjct:  262 IPGIMDTSGTRCCPQGCGMCGGVGCGLVDMNLVAPTVEGDVPIDAKSGDYCCTSGV--DTRDVTCGTGTGDDEGYPPCFI-PAGTGTVTATLAPEVSSNLIDNCGLPGIPGIMDATGTRCCPQGCGMCGGGGCGLIDMNLVAPTVEGDVPIDAKSGDYCCTSGVDTRDVTCGTGTGDDEGYPPCL------IPADFAEDTCYVEGVEGVSDDGVYCCPLGCGQCGGEGCGAIPVVNIFPDGRELPEDATASSYCCLKAFVDIEVVCGDPGVEPPCMIPEGTSRPPV-----AAPVDTG 545
[Close]
BLAST of mRNA_M-pyrifera_M_contig7719.18193.1 vs. uniprot
Match: D8LML4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LML4_ECTSI)

HSP 1 Score: 79.0 bits (193), Expect = 1.540e-13
Identity = 44/76 (57.89%), Postives = 49/76 (64.47%), Query Frame = 1 
Query:  247 FDPSTCANGIAGYQDGDICCLESC-GQCGGAGCGTIPGTGGAANCCPTTIRESGVVCGE---APCIMEG--YTPAP 456
            F  STC NGIAG QDG +CC E C G CGG GCG+I GT GA +CC +TI  +GV C     APCIM    YT AP
Sbjct:    6 FVASTCPNGIAGVQDGSVCCAEECNGVCGGEGCGSIVGTNGAEDCCSSTILTTGVDCDVGVVAPCIMLNGTYTDAP 81
[Close]
BLAST of mRNA_M-pyrifera_M_contig7719.18193.1 vs. uniprot
Match: D7FWE8_ECTSI (Mannuronan C-5-epimerase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FWE8_ECTSI)

HSP 1 Score: 79.3 bits (194), Expect = 5.260e-13
Identity = 52/140 (37.14%), Postives = 69/140 (49.29%), Query Frame = 1 
Query:  280 GYQDGDICCLESCGQCGGAGCGTIPGTGGAANCCPTTIRESGVVCGEAPCIME-GYTPAPAVVGGGTAAPIGSSTCSNGVLGFQDGAACCAANCGQCGGEGCGAIPGTAGSAACCSSIVLAESPSCDITNESPCVIEGYT 696
            G   G  CC   C +CGG+GC         A+CC + I  +G  CG APC++E G +P PA  GG            +G+L    G  CC+A CG CGG GCG+  G   +  C S+I  A  P       +PCV++G T
Sbjct:   23 GILKGIYCCSAGCEECGGSGCSDRGDGLTGADCCTSDILAAGKACGSAPCLLEEGSSPTPASSGG-----------CDGIL---QGDVCCSAECGTCGGSGCGSRAGLTANECCTSTIAAANVPC----GSAPCVVDGDT 144
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig7719.18193.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 16
Match NameE-valueIdentityDescription
D7FZM1_ECTSI1.810e-14776.21Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JSA0_9PHAE3.500e-7175.91Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FJ68_ECTSI1.930e-4035.22WSC domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7FJ69_ECTSI2.050e-3142.86Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K7R2_9PHAE6.590e-2747.77Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JG29_9PHAE1.470e-1828.80Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FZM0_ECTSI1.680e-1857.89Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LTF3_ECTSI1.150e-1633.89Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LML4_ECTSI1.540e-1357.89Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FWE8_ECTSI5.260e-1337.14Mannuronan C-5-epimerase n=2 Tax=Ectocarpus TaxID=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig7719contigM-pyrifera_M_contig7719:4394..12302 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score156.8
Seed ortholog evalue1.4e-35
Seed eggNOG ortholog2880.D7FJ68
Preferred nameMTPAP
KEGG koko:K08342,ko:K16462,ko:K17478,ko:K18060
KEGG Pathwayko04136,ko04138,ko04140,map04136,map04138,map04140
Hectar predicted targeting categoryother localisation
EggNOG free text desc.importin-alpha family protein binding
EggNOG OGsCOG0086@1,KOG0260@2759,KOG4725@1,KOG4725@2759
Ec32 ortholog descriptionexpressed unknown protein
Ec32 orthologEc-25_003630.1
EC2.7.7.19
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko01002,ko01009,ko03029,ko03036,ko03110,ko04131,ko04812
Exons7
Model size816
Cds size792
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig7719.18193.1prot_M-pyrifera_M_contig7719.18193.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig7719 4418..12302 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816672.9366744-UTR-M-pyrifera_M_contig7719:4393..44171622816672.9366744-UTR-M-pyrifera_M_contig7719:4393..4417Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig7719 4394..4417 +
1692278111.205645-UTR-M-pyrifera_M_contig7719:4393..44171692278111.205645-UTR-M-pyrifera_M_contig7719:4393..4417Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig7719 4394..4417 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816672.9478898-CDS-M-pyrifera_M_contig7719:4417..46431622816672.9478898-CDS-M-pyrifera_M_contig7719:4417..4643Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7719 4418..4643 +
1692278111.2203574-CDS-M-pyrifera_M_contig7719:4417..46431692278111.2203574-CDS-M-pyrifera_M_contig7719:4417..4643Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7719 4418..4643 +
1622816672.9612653-CDS-M-pyrifera_M_contig7719:5498..56561622816672.9612653-CDS-M-pyrifera_M_contig7719:5498..5656Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7719 5499..5656 +
1692278111.2309024-CDS-M-pyrifera_M_contig7719:5498..56561692278111.2309024-CDS-M-pyrifera_M_contig7719:5498..5656Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7719 5499..5656 +
1622816672.9713655-CDS-M-pyrifera_M_contig7719:8674..87561622816672.9713655-CDS-M-pyrifera_M_contig7719:8674..8756Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7719 8675..8756 +
1692278111.2415922-CDS-M-pyrifera_M_contig7719:8674..87561692278111.2415922-CDS-M-pyrifera_M_contig7719:8674..8756Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7719 8675..8756 +
1622816672.9818985-CDS-M-pyrifera_M_contig7719:9470..95201622816672.9818985-CDS-M-pyrifera_M_contig7719:9470..9520Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7719 9471..9520 +
1692278111.2523038-CDS-M-pyrifera_M_contig7719:9470..95201692278111.2523038-CDS-M-pyrifera_M_contig7719:9470..9520Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7719 9471..9520 +
1622816672.9953635-CDS-M-pyrifera_M_contig7719:10235..103311622816672.9953635-CDS-M-pyrifera_M_contig7719:10235..10331Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7719 10236..10331 +
1692278111.2686834-CDS-M-pyrifera_M_contig7719:10235..103311692278111.2686834-CDS-M-pyrifera_M_contig7719:10235..10331Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7719 10236..10331 +
1622816673.0064034-CDS-M-pyrifera_M_contig7719:11263..113661622816673.0064034-CDS-M-pyrifera_M_contig7719:11263..11366Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7719 11264..11366 +
1692278111.2779295-CDS-M-pyrifera_M_contig7719:11263..113661692278111.2779295-CDS-M-pyrifera_M_contig7719:11263..11366Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7719 11264..11366 +
1622816673.0169718-CDS-M-pyrifera_M_contig7719:12225..123021622816673.0169718-CDS-M-pyrifera_M_contig7719:12225..12302Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7719 12226..12302 +
1692278111.287673-CDS-M-pyrifera_M_contig7719:12225..123021692278111.287673-CDS-M-pyrifera_M_contig7719:12225..12302Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7719 12226..12302 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig7719.18193.1

>prot_M-pyrifera_M_contig7719.18193.1 ID=prot_M-pyrifera_M_contig7719.18193.1|Name=mRNA_M-pyrifera_M_contig7719.18193.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=264bp
MPGVSDGTVCCKEACGACGGEGCGAVVGTNGASDCCPSTIIEEAAGEVCG
EAPCVMEGFTPSPVNPAFDGTVAPFDPSTCANGIAGYQDGDICCLESCGQ
CGGAGCGTIPGTGGAANCCPTTIRESGVVCGEAPCIMEGYTPAPAVVGGG
TAAPIGSSTCSNGVLGFQDGAACCAANCGQCGGEGCGAIPGTAGSAACCS
SIVLAESPSCDITNESPCVIEGYTPAPVVTELGSAAPVVPGTCSNGMPGY
QDLDVCCLEVGDCS
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mRNA from alignment at M-pyrifera_M_contig7719:4394..12302+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig7719.18193.1 ID=mRNA_M-pyrifera_M_contig7719.18193.1|Name=mRNA_M-pyrifera_M_contig7719.18193.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=7909bp|location=Sequence derived from alignment at M-pyrifera_M_contig7719:4394..12302+ (Macrocystis pyrifera P11B4 male)
GCGCCCTCGCAGTGTTCCAACGGCATGCCCGGCGTGAGTGACGGCACGGT
GTGCTGTAAGGAGGCGTGCGGTGCCTGCGGGGGTGAGGGGTGCGGAGCCG
TGGTGGGCACCAACGGCGCGTCCGACTGCTGCCCCTCTACCATCATCGAG
GAGGCGGCCGGGGAGGTTTGCGGGGAGGCCCCCTGCGTCATGGAAGGCTT
TACGCCGTCGCCGGTGAACCCGGCCTTCGATGGCACCGTCGCCCCATTCG
GTGCGTGGGTGGTTGGGTTTTGTTGAGTGAAAGGCGTTTTTTTTCCCTTC
GTCATCCCCTGGATAATGGGTGTACAGTGGTACATACTAGATACGAGTAT
CAACCCTTTACGCTCTTGAGTGTACGCATACAGGAATCTCACTCTACTTC
CAAGCAAATTGCTTGGAAAGCTTGTCTACCCTGAAGAACTGCACCTATGT
GTAACAACTGCTAGGTTGTTGCTTCATTTACTAATAAAATAACAGCAGTG
GTTTGCGGAATGGCCTTAATTCCGGCATGCTACATACGTGCGACCCAGTA
TTGATTTTGATGGGTCAGGTTGTGTGTGCCCTACGGTTGCTTTGTTCTGT
TTTGTTTTGTTCCTTTTCGTTTTGTTTCGTTTCGTTCCGTTTCGTTTCGT
TTCGATCGTTTCGTTTGGTGTCACGTGTTTGATATCGTATCGAACGCGTC
GATGCTTTGAAATGTCGATCTTTCGATGTATCGCATTGAACGTGCTTCGC
GATTGTTTTCGGTTGGTTTCGTGGACGTTGTTTAATTTTTGGTGTTGGGT
ATCGACGTCGGAATCAACTTCGATAATATAGCGATAAACAAAAAAAAGAA
GCTGATACGATACGATTTTGATATAATTTGATATGGTACATGGAAGCTTT
CATTCAATATTATGTCGAATGAAAAACACGGGGATGCCAGGGAGGGTGAA
ACACGTTCGATGTTGCGATATATGGTGTCAAAGGTCAAATGTTCGACACA
TTGAAACCATATTCAACGCTCATTTCGTTTCGCTGCGTTCGTTTTCGATC
GTTTGGTGCTGTTGTTTCTTTTGCTGGTTGCTCACTGTCCCTTGCCCCCT
CGCAGACCCGTCGACGTGTGCCAACGGTATCGCGGGATATCAAGACGGTG
ACATCTGCTGCTTAGAGAGCTGCGGACAGTGCGGCGGAGCAGGCTGCGGA
ACGATTCCGGGAACAGGCGGGGCTGCTAACTGCTGCCCGACCACCATCCG
CGAATCTGGCGTGGTAAGTCACAGACCTTGGATAAACACGCCGTGATATC
ATGCAAAGACATGTACGTATTACGGGGGGCCATGGTAAATAGGACCAAAT
ATTGTTAGTAAAAATAGAGAAATATATAGGTTTTTGTGTGTACCGTAGGT
CCTATTTACTATGTACCCCCGTAATAGGTATTCGTCAGAAATTATATGGA
CAGACAGTCCCATCATACTACGTACAAAAACATTCAAAAATGAGCTTCGA
CGAAATTCCCCATCTCACACTTGATACATATATATATATATATTGATACG
ATATTGTTGGCCCTCTGCTCTCAGCGCTCCTCAGCGTTTCTTAGGCGTAT
TTTTTTGCGTTGTTCGTGCTAGCGCGAGATGAGAATCACCTCACGGGACG
AAACTGCCTTATCGTCATCCTCGGGCGTGCTCGCGCCGTGCTCTGAGTTG
GACCTTAATATATATATATAGTATATATATATATTATATATACATATTAA
TAGTTTTTTCATGAATACAAGAACTACTCGTATGATATTGATAGAAAGGG
CAACACACACACGCACCTTTCGGTGTAGACAATGATGGACTATCACGTGC
AAATACACGGTTTGTTACATGGATTGGAGCTGTACAGTGCTGCACCAGGT
GCCGTAGTATCGCTAGGGTGTCTTGCACGCGGGGGATATGTACGGTATTA
GTATTGGTCGCTATCGGTATCGTGTACACCTATTAATAGTACAGATAGAT
CATGATATAGATGATCTATCTGATCTGTCTGCAGTAGATCATCTAGATGG
TCTAGTTCCTCGCCTGCCGTTGGGAGAGTAGCGCTTGTGCAGGATCTGTG
TTATAGGGCAGATCTATCACACACAGGAAACATTTGCTACTGCTGTAGAT
CATGCAGATCATCGCACAGCTCCAACCCGGCACCAGGATCTATAGGTGAT
ACAGATCATGCAGATCATACAGATCAGAGATATATCTATCTGTATGCCCT
GAAATATCTATATAATCAAGTGGGAAGTATCTGTAGATGATCTGTAGATG
ATCTGTGAATGATCTGTCAGGGGTGTGGTATCGTGCACGTGGGACCGCCT
CACCACCACCCGCGAATCTGGCGTGGCAAGTCAACGGTTAGCTGCAGCTG
TAGCAAGGACGGTGGTGGTGGTCGCGATGGGTATCGTGCGCATGAGAGTG
TGGCGCGCCACCGCCGCCATCCTTACCCCTCTTTGGACTTGGAAGGGGCA
GCTGACAGCTGGCGATAAAAAATGACCATGACAGTACCGGCCACGCTGCG
TGTTTGGGGGACAATACGTAAACGTTGCTGTTCGAGTTCCAATCCAAGGT
ATCATATTTGTTCGGAACGGGCGCGACATAATCCTACCCGTACGACTCAG
CGCTCACGTTGCCCCTAGACGGCTGATTGAATCGAAGGCACTATTGTTTG
GGTCGCTATCAAAGGAGTTCCAAAGGAAGCTTTACTCTGGAATGAGGAGT
CGGTTGTAGCGATAGCTTCCGTCCTTTTTTTCAACCCATGTGTTGTATTC
TCCCTTCTTTTCTCTCCCCCTGTCCTATTAAATAGGCGTAACTCAGATCC
GGGGTCACGCTACAGGCTCCCCCCCCCCCCCCTCCCTCCACTACGTCTCT
TTGTGCTGTACCTTTTTATCGCGAGAAGGGTTCAGCAATTGTTTTCCTCC
TCGACTCGCGTCGAAAAGCGCCTCGACCCAAACTATGCGCTCTCAGTAGT
TATTGGTATTGCTTTTTTTTGCTAATGAAGGCTAAAATCTCACGATGGTG
GGATTTGGCTCAAGTATCAACCATGTTGATAGTAGTAATTCGAGGGGAAC
CACCACTAAAATGGTCGCCGGTGGCGTAGCGGCCGCTTCGGGCATCGCGC
ATGTGAAGTCAGGTGCCAGCGTGCGGTGCCCATCTTCGATGGTGTCAACT
TGTCTTCGCGTGTCGATTATGTTTTTGTGTGTCTATTTTGTGTCTGGTCT
GTGTGTTTCGGATGTCTTTGGATATCATCGGCGAATGGCGTATTCGGGTA
GCATCGCTAAATGGTGCTGGTAGCTCTTATCAAAATATTCCAACTTATCG
AGTGAAGCCTTTCATTACTCTTACGGATGGATAATTATTCTTAATCTTAT
CGCGCAGTCGCATCGTTCTTTCGGCCCAGTCGCGTTACCCAATGATATCA
ATCTGATCGTGTCGCGTGTCGCCAAATCGCTCAATCACATCACCCAATAC
TGTCTCCCAATCACATCACCCAATCACACCCTCTCCCACTTAAACCACCC
AGTGATATCGCTCAATGAAGTCCCCCAATCGATTCACTAGCTGCTCTCAC
TCAATGTCATCACGCACCGATATCGCTGGGTGGCATCGCGCAATGACATC
GCCCAACCAACAACCAACAAAATCATTGGTATACCACCACTCGAATGCAT
CCTTCACTGGTATCGTATACTGTGCTGTAACTCGATGGCATCTGCATAAA
CTGTGTATCACCTGCGTGACACTAGGGACACATTTCTTCTTCTGGATCTC
TCCTACACAGATCCTGCACAATGGTCGGTTTTGATCTAGATGATCTAGAT
GATCTAGATCATCAATCTGTGGATGATCTATACAATCTATCTGTGGATGA
TCTAGATAATCTATCTGGGGGTGATCTAGATAATCTATCTGGGGGTGATC
TCGACGATCTATCTGGGGGTGATCTCGACGATCTACCTGTAGATGATCTA
TCTGTAGATGATCTATATGTAGATGATCTATCTGTAGATGATCTATCTGT
AGATGATCTATCTGTAGATGATCCATCTGTCGATGATCTGTCTGTAGATG
ATCTATCTGTACATGATCTATCTGTAGATGATGTTTCTGTAGATGGTCTA
TCTGTAGATGATGCATCTGTAGATGATGTATCCGTACATGATGTATCCGA
CGTGTACATGGTTTGGGCAGATCGGCGTTTGTGTCGACGATATCGCTTAC
CGCCCCGCTGTGTCTGTTGCGATGGATTCAGGTGTGTGGTGAGGCCCCGT
GCATTATGGAAGGCTACACTCCCGCGCCTGCTGTCGTCGGCGGTGGCACC
GCTGCCCCCATCGGTGAGGACCATAAAAACAGACAGGCAGACAGACCTTG
CCTCATGCAAGAAGACAGAGCTTGCCTCATGCGTCAAACTAGAGCTTGCT
CGGTTGCGTCAAAGAACGCTTGCTCATGCGTCACACGGAACATGCCTCGT
GCGTCAACACAAAACTGCGCTCGTGCGTCGATAAAAGCTTGCTCGTGCGT
CAAACAATACTGTGCTCATGCATGCCGTCACGTAATCCTTGCTCGTGCGT
CGAACAGCACTTGCTCATGCGGCAGACTAACAGTGTCCTCATGCGCCGAA
CATGTTTTGCTCATGCGTGAAATAACACGTGCTCGTTCATGTGCCAAACA
AAAGTTGATCGAGCCCGTGAAATACCACTTGACCATCGGCGAGGACCAAC
AGAAAAGGCTCATGTACCACGTCGCCCCTTGTTTTGACGCAGACGGTTCT
GATTGGTTTCTGGTTGACGCAGGCGGCTCTGATTGGTTGACGCAACGTCT
TGGCCGTTGTGGCGGTGTATCCTGTTGCGCTTCGCCGTAGCGTGTACTGA
ACTGGTTTGCATGCACGAAAAAGCGGCAAGAACGCCTCGTGCTCGCGAAC
AGCCTTTTTTTTGTAACAGGGGTGCCTTTCCTGAAGGGTTTGTTCGCTCC
ATTACCCTTCCCTGATGGCATCTGTTCCCCCCTTTCCGATGTTTTTTTTT
TTTATGTACTGGTCCTCTTGATGCTAGGCTCATCCACCTGCTCCAACGGC
GTCCTTGGATTCCAAGACGGAGCTGCGGTAAAAGGGGTTTCGGCCAGGAA
CATATCCGTTCGATTCACGTGGTTTATAGTGGTTGTTCGCGGGAAGATAT
CCGTTGCACCCACGCGTTTTTTCCGTCGTTGTTTGGCAGGATGATATCCG
TTCAATCCACGTGGTTTTTAGTGGTTGCTTGCGGCACGATATCCGTTGGA
CCCACGTTGTCGTTATTTGCAGCAGGATAATATCCGTTCGAGCCACGTGT
TCTTTTGTGGTTGTTTCTTGGACGATATATCCGTTGGACGGACGCGGTAT
GTTGTCGTTGTTATCAGCAGGATAATATCCGTTCGATCCACGTGTTTTTT
GTGGTTGTTTCCTGGACGATATATCCGTTGGACGGGCGCGATATGTTGTC
GTTGTTATCAGCAGGATAACATCCGTTCGATAGACGCTTTTTTCCGTTTT
CGGCTAGTGCAAAGGAGCCCCAATGCCATTGGCCGGCCGGTTAACATTTT
TTTGGCGACCTCTATGGATTACTGATTGACCGAAAAAAGTATTATTTTTC
GCGCTGTTGACCACATCGGTACATACCTCGTCAGGACACAAACAATGCAC
CCATACATACAATGCGAGTAGCACCTTCACGTGCCACGATACAAAGCAAA
GCTCCCCCCCCCCCCCCTGCAGGACATGAGCCCCCCCCCCCCCCCCGCCC
GCCGCAAAACCGCCTGACCACGTCATTGGTGCGGGGTAACAGTGCTGCGC
GGCAAACTGCGGCCAGTGTGGTGGCGAAGGCTGCGGAGCGATCCCCGGTA
CTGCTGGGTCTGCGGCGTGTTGCTCGTCCATCGTCCTGGTGAGTTTTCCA
GAGATTATAAGCATGTGTAGGAGTGCTGAATTAGGGGAGGGGGGTGAAAG
AGCGGAGGGTTTCGGCAGTGGTGAGGGCTCTGAGGCTCCTTCCTCGATTC
GGGAGTTCCATTTCTCATCGAACAGCGGACTTTTGATATTACCGGTAAGC
TAAGCTTGAAAGACAATCCTCTGGGCCGAGTATCGAACTCTGGACAGTAG
CCTGTTGAAAGCGCCTATTGGTGTGTCAATGTGTCCATTGGCTGCGGTAT
TGCATGTGGATACCCATTGTCGACCTCAACTGGTTCCCAAAGTGTGCCAA
TCGATAGCTATCGCAATCAACCATGGACATGCCTGCTGCAGGAATAACAT
CATGCCTGTGGTCTATTCTAGACAACAGACCTGGTGTGCTATTAACAGGT
GTCCAAGTAACAGAGCATCATAGTCGTCATGGTTGTCCACACGTACATCT
GCCTGGAAATGAATGTCTTCCTTCATAGTGGTCATAAACCAACCAGTTCC
TTACGCCCGCGCAGAAAAACGCCCTGGTTATGTTTTTAGAATTAACCCGT
ACCTTGAGCTTGCACACGCGAACCCTTCCCTACGCCTGAACATGAAACGC
CCTGGTTATGTTATTGGAACCAGCCTGTACCTTGAGCTGGCACACACTCA
GCCTGAATGCACGGCACGGCGTGTACCAGTTTTTGCCTGTAGGAGGCGTC
GCTCGTGCCTCATGCAAAAAATGTAGGAATTGCCACCCGTGACCCTGTGA
CTGCTTTTTCGCGCGACGACGCTTGTTTTGCTATTGCGCTTTTTGTTGTT
GTTTTTTTTTTGCCTTGGTTTTTAATCCTCCGGCGGATCGGTAAGATGAA
AAAAAATCGCTTAAGCCAGCTTGAGCTCACCTCACTTTGTTGTGCTGTCG
CTTGATTTTTGTTCTTAAAGGCGGAAAGCCCGTCGTGCGACATAACCAAC
GAATCTCCGTGCGTGATCGAAGGCTACACCCCAGCTCCCGTGGTAACAGA
GTTGGGCTCTGCTGCTCCCGTTGGTGAGGTGGTGTAGCAGAGCAGATAGC
AGTAGAGCTTGCCGCAATGTATATAGATACTACCGTTTGTTGTACGTGCG
GAGATTTTGGTTTATGTGATATGTGCTGGTGTGGTGTGTCTTGTTTGCTG
TACGTGTTAACTGTTTTTATTGTTGAATGAAGTGCTTCTTGCACAGCAGT
ATGAATAGTAGCAGGTGGTATTGATGGTGTTCTAGTGTTGGTGCTATTGC
GGGGGGGCATAGTAAACAGGACCTACGGTACACGGTACACACTAAAAACT
ACACTCTTCCCTATTTTTGCTAACAATATTTGGTCCTATTAACTATTTAC
TACGGTACCACGTAAAATGGTTGATTACAGTAGCGGCAGCAGTAGTAGCG
GCAGCAGCAGGAGTAGTAGGAGTAGTATTAACAGTAGTAGTAGAAGTAGC
AGTAGCAGAGGTAGTAACAGCAGTAGAAGTATGAGTAGATAGTAGCGGCG
GTGGTGATACTAGTAGAGAATGTAGCAGTGGTATAGCAGTAGCAAAAGTG
GAAGTAGTAGCGGCAGTGGTAGTATATGTAGTCGTAGTTATAGCATGAAT
AACAGTACTAACAGTGGTAGTCGTAGTAGTGGTAGTAGTGGTAGTAGTAG
TAGTAGTAGTAGTATTGGTAGTAGTAGTAGTAGTAGTAGTAGTAGTAGTA
GTAGTAGTAGTAGTAGTAGCAGCGAGAGTAGCAGTAGCAGAGGCAGCCGT
TACCGCAGAAGCACTCCTGATGTTCTTCAATCGTTCCAATGTACGGACCA
GGTGCATGGCAAGGACTGACTATCGCCCACCCCCTTTTCTGTCCATTGCG
TAAACACTCCCTATCCCATCATGCTGTGACAGTTCCCGGCACATGCAGCA
ACGGCATGCCTGGCTACCAGGACCTGGACGTCTGCTGTCTTGAGGTGGGT
GACTGCTCT
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig7719:4394..12302+

>mRNA_M-pyrifera_M_contig7719.18193.1 ID=mRNA_M-pyrifera_M_contig7719.18193.1|Name=mRNA_M-pyrifera_M_contig7719.18193.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1584bp|location=Sequence derived from alignment at M-pyrifera_M_contig7719:4394..12302+ (Macrocystis pyrifera P11B4 male)
ATGCCCGGCGTGAGTGACGGCACGGTGTGCTGTAAGGAGGCGTGCGGTGC
CTGCGGGGGTGAGGGGTGCGGAGCCGTGGTGGGCACCAACGGCGCGTCCG
ACTGCTGCCCCTCTACCATCATCGAGGAGGCGGCCGGGGAGGTTTGCGGG
GAGGCCCCCTGCGTCATGGAAGGCTTTACGCCGTCGCCGGTGAACCCGGC
CTTCGATGGCACCGTCGCCCCATTCGATGCCCGGCGTGAGTGACGGCACG
GTGTGCTGTAAGGAGGCGTGCGGTGCCTGCGGGGGTGAGGGGTGCGGAGC
CGTGGTGGGCACCAACGGCGCGTCCGACTGCTGCCCCTCTACCATCATCG
AGGAGGCGGCCGGGGAGGTTTGCGGGGAGGCCCCCTGCGTCATGGAAGGC
TTTACGCCGTCGCCGGTGAACCCGGCCTTCGATGGCACCGTCGCCCCATT
CGACCCGTCGACGTGTGCCAACGGTATCGCGGGATATCAAGACGGTGACA
TCTGCTGCTTAGAGAGCTGCGGACAGTGCGGCGGAGCAGGCTGCGGAACG
ATTCCGGGAACAGGCGGGGCTGCTAACTGCTGCCCGACCACCATCCGCGA
ATCTGGCGTGACCCGTCGACGTGTGCCAACGGTATCGCGGGATATCAAGA
CGGTGACATCTGCTGCTTAGAGAGCTGCGGACAGTGCGGCGGAGCAGGCT
GCGGAACGATTCCGGGAACAGGCGGGGCTGCTAACTGCTGCCCGACCACC
ATCCGCGAATCTGGCGTGGTGTGTGGTGAGGCCCCGTGCATTATGGAAGG
CTACACTCCCGCGCCTGCTGTCGTCGGCGGTGGCACCGCTGCCCCCATCG
GTGTGTGGTGAGGCCCCGTGCATTATGGAAGGCTACACTCCCGCGCCTGC
TGTCGTCGGCGGTGGCACCGCTGCCCCCATCGGCTCATCCACCTGCTCCA
ACGGCGTCCTTGGATTCCAAGACGGAGCTGCGGCTCATCCACCTGCTCCA
ACGGCGTCCTTGGATTCCAAGACGGAGCTGCGTGCTGCGCGGCAAACTGC
GGCCAGTGTGGTGGCGAAGGCTGCGGAGCGATCCCCGGTACTGCTGGGTC
TGCGGCGTGTTGCTCGTCCATCGTCCTGTGCTGCGCGGCAAACTGCGGCC
AGTGTGGTGGCGAAGGCTGCGGAGCGATCCCCGGTACTGCTGGGTCTGCG
GCGTGTTGCTCGTCCATCGTCCTGGCGGAAAGCCCGTCGTGCGACATAAC
CAACGAATCTCCGTGCGTGATCGAAGGCTACACCCCAGCTCCCGTGGTAA
CAGAGTTGGGCTCTGCTGCTCCCGTTGGCGGAAAGCCCGTCGTGCGACAT
AACCAACGAATCTCCGTGCGTGATCGAAGGCTACACCCCAGCTCCCGTGG
TAACAGAGTTGGGCTCTGCTGCTCCCGTTGTTCCCGGCACATGCAGCAAC
GGCATGCCTGGCTACCAGGACCTGGACGTCTGCTGTCTTGAGGTGGGTGA
CTGCTCTTTCCCGGCACATGCAGCAACGGCATGCCTGGCTACCAGGACCT
GGACGTCTGCTGTCTTGAGGTGGGTGACTGCTCT
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