mRNA_M-pyrifera_M_contig77189.18192.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig77189.18192.1 vs. uniprot
Match: A0A5A8EKK4_CAFRO (Uncharacterized protein n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8EKK4_CAFRO) HSP 1 Score: 89.0 bits (219), Expect = 1.290e-16 Identity = 76/223 (34.08%), Postives = 117/223 (52.47%), Query Frame = 1 Query: 64 IEGSNFGNSLEGPSKALVGGQLCDPVVFVNSSFLECRNVSMAQ-WKETAVRVTVGGVEGQG-NVFSFTGSPTIVGIVPSSAPTTGNVWMNITGSNLGAGNGESDLSFITVGGVECLEIDSMNGGDKARCLIPPGVGAKLTIAVKTKDGLRA--AIDNLFSYNPPTISSISPNSVVTG-ALTYEVVITGTNLA-------ARNVTVGGVSCASITATSSKSITC 696 + G+N +L+ P + ++ G C VV VNSS + C +S A W +AV + V + ++ + G P++V + P G + I G N G S+++ +TVGG EC E+ S+ + PPG G ++ V T G RA A FSY+ PT++SISP++V++G +LTY+ I+GTNL AR+V VGG C+ SS + C Sbjct: 1427 VAGTNLATALDVP-ELVIAGVRCPDVVVVNSSVVVCFGLSGADGWLGSAVALAHPAVSVRSADLLTAFGLPSVVAVSPPGGSVEGGDVIRIVGENFG--RRLSEVASVTVGGREC-ELVSLVSSSIVQVRTPPGTG-RVQAVVLTNIGGRATDATPATFSYDAPTVASISPDTVLSGPSLTYDFNISGTNLGNALDGPNARDVLVGGRPCSQARVVSSTLLQC 1644
BLAST of mRNA_M-pyrifera_M_contig77189.18192.1 vs. uniprot
Match: A0A5A8CR06_CAFRO (Uncharacterized protein n=3 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8CR06_CAFRO) HSP 1 Score: 89.0 bits (219), Expect = 1.310e-16 Identity = 76/223 (34.08%), Postives = 117/223 (52.47%), Query Frame = 1 Query: 64 IEGSNFGNSLEGPSKALVGGQLCDPVVFVNSSFLECRNVSMAQ-WKETAVRVTVGGVEGQG-NVFSFTGSPTIVGIVPSSAPTTGNVWMNITGSNLGAGNGESDLSFITVGGVECLEIDSMNGGDKARCLIPPGVGAKLTIAVKTKDGLRA--AIDNLFSYNPPTISSISPNSVVTG-ALTYEVVITGTNLA-------ARNVTVGGVSCASITATSSKSITC 696 + G+N +L+ P + ++ G C VV VNSS + C +S A W +AV + V + ++ + G P++V + P G + I G N G S+++ +TVGG EC E+ S+ + PPG G ++ V T G RA A FSY+ PT++SISP++V++G +LTY+ I+GTNL AR+V VGG C+ SS + C Sbjct: 1371 VAGTNLATALDVP-ELVIAGVRCPDVVVVNSSVVVCFGLSGADGWLGSAVALAHPAVSVRSADLLTAFGLPSVVAVSPPGGSVEGGDVIRIVGENFG--RRLSEVASVTVGGREC-ELVSLVSSSIVQVRTPPGTG-RVQAVVLTNIGGRATDATPATFSYDAPTVASISPDTVLSGPSLTYDFNISGTNLGNALDGPNARDVLVGGRPCSQARVVSSTLLQC 1588
BLAST of mRNA_M-pyrifera_M_contig77189.18192.1 vs. uniprot
Match: A0A514ZTP0_9BACT (T9SS type A sorting domain-containing protein n=1 Tax=Spirosoma sp. KCTC 42546 TaxID=2520506 RepID=A0A514ZTP0_9BACT) HSP 1 Score: 72.4 bits (176), Expect = 5.870e-11 Identity = 69/228 (30.26%), Postives = 110/228 (48.25%), Query Frame = 1 Query: 1 TITKVTPNDVATLPGEYRKFYIEGSNFGNSLEGPSKALVGGQLCDPVVFVNSSFLECRNVSMAQWKETAVRVTVGGVEGQGNVFSFTGSPTIVGIVPSSAPTTGNVWMNITGSNLGAGNGESDLSFITVGGVECLEIDSMNGGDKARCLIPPGVGAKLTIAVKTKDGLRAAIDNLFSYNPPTISSISPNS-VVTGALTYEVVITGTNLAARNVTVGGVSCASITATSS 681 TIT ++PN +T G + G++FG S +GG + PV S N+ Q V++TV G +V +P ++ + P++ T+GN + + G++LGA +TVGGV + G L+P G G + V DG + + LFSYNPPTI+ I+P S TG +T ++ T + + +V++GG AS++A SS Sbjct: 291 TITSISPNHGSTSGGT--SLTVLGTSFGTS----GFVTIGG-ITAPVTGSYSHTAVVVNLPAGQGTNLPVQMTVSGQSSTSSVTFNYDAPALISVSPATG-TSGNT-VELIGTSLGASG------TVTVGGVSATVVSGGWGHTHVSFLLPSGQGTNQPVVVTRTDG-QVSNSLLFSYNPPTITVITPASGPTTGGITLTLMGTNFGVQSASVSIGG-QAASVSAQSS 501
BLAST of mRNA_M-pyrifera_M_contig77189.18192.1 vs. uniprot
Match: UPI000644A0D9 (hypothetical protein n=1 Tax=Acytostelium subglobosum LB1 TaxID=1410327 RepID=UPI000644A0D9) HSP 1 Score: 61.6 bits (148), Expect = 2.720e-7 Identity = 56/176 (31.82%), Postives = 88/176 (50.00%), Query Frame = 1 Query: 196 KETAVRVTVGGVEGQGNVFSFTGSPTIVGIVPSSAPTTGNVWMNITGSNLGAGNGESDLSFITVGGVECLEIDSMNGGDKAR--CLIPPGVGAKLTIAVKTKDGLRAAIDNLFSYNPPTISSISPNSVVTGALTYEVVITGTNL-------AARNVTVGGVSCASITATSSKSITC 696 K+ ++++ VG + + +++ + V VP SA T G V + I G+N ++D S +T+ G C DS++ D C I PG+G L++++ D DN FSYN PTISS+S + ++T +TGTN A N+T+ C +I SS ITC Sbjct: 3703 KDISIKLVVGDQATERDNVTYSYNAPKVSSVPKSA-TDGEV-ITIVGTNFVPSGVDADDSSLTINGDSC---DSVSWIDDTHVSCSIAPGIGRDLSLSLVVGDQENTD-DNTFSYNAPTISSVSDSDTKGSSIT----LTGTNFVPAGVSPADSNITINNQDCETIDWISSTQITC 3868
BLAST of mRNA_M-pyrifera_M_contig77189.18192.1 vs. uniprot
Match: A0A2P6N8E8_9EUKA (Uncharacterized protein n=1 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6N8E8_9EUKA) HSP 1 Score: 61.2 bits (147), Expect = 3.730e-7 Identity = 78/247 (31.58%), Postives = 116/247 (46.96%), Query Frame = 1 Query: 1 TITKVTPNDVATLPGEYRKFYIEGSNFGNSLEGPSKALVGGQLCDPVVFV---NSSFLECRNVSMAQWKETAVRVTVGGVEGQGNVFSFTGSPTIVG--IVPSSAPTTGNVWMNITGSNLGAGNGESDLSFITVGG------VECLEIDSMNGGDKARCLIPPGVGAKLTIAVKTKDGLRAAIDNLFSYNPPTISSISPNSVVTGALTYEVVITGTNLA----ARNVTVGGVSCASIT-ATSSKSIT 693 T+T V+ V+TL G I G+NFGN+L S A VG P+ + NS + V + +TVGG + +++ +PTI +VP+S T N+TG N G G + +T+ G V+ + + D + +P G G+ TI V DG + AI N FSY PPT+SS++ +G L V + G NL A ++ V G+S +IT TS S+T Sbjct: 5719 TVTNVSA-PVSTLGGN---IVIYGNNFGNNLSAVSVA-VGKSGISPITSLAIFNSDTVLTMTVPTGTGASVPITITVGG-QSVTTAYAYK-APTISSTYLVPTSGAMT-----NLTGLNFG---GNTSAITVTLSGPFFSQPVQLSVANVSSSHDVLQLTVPAGTGSNNTITVNV-DG-QIAIYNSFSYQPPTVSSLTGLPPTSGGL---VSVLGANLGSTLNAISIAVAGLSATNITYVTSDTSLT 5945
BLAST of mRNA_M-pyrifera_M_contig77189.18192.1 vs. uniprot
Match: D3B798_POLPP (Uncharacterized protein n=2 Tax=Polysphondylium pallidum (strain ATCC 26659 / Pp 5 / PN500) TaxID=670386 RepID=D3B798_POLPP) HSP 1 Score: 58.2 bits (139), Expect = 3.970e-6 Identity = 56/187 (29.95%), Postives = 90/187 (48.13%), Query Frame = 1 Query: 163 LECRNVSMAQWKETAVRVTVGGVEGQGN--VFSFTGSPTIVGIVPSSAPTTGNVWMNITGSNLGAGNGESDLSFITVGGVECLEIDSMNGGDKARCLIPPGVGAKLTIAVKTKDGLRAAIDNL-FSYNPPTISSISPNSVVTGALTYEVVITGTNLAA------RNVTVGGVSCASITATSSKSITC 696 L+C + E V VT+ G + Q +++TG PTI I P S GN ++I+G G ++F ++ I S + + +P G G + I V G + + N FSYNPP+I+ I+PN + VVI+G+NL ++ +G VSC++I SS+S++C Sbjct: 3539 LQCNVPVYDRNTEEIVSVTLDGEQSQETNVTYTYTGEPTIDSISPESGSVDGNYQLDISGKFFKNGEISPTVNF----NLQAATIVS-SSDNSITITVPSGGGKDIPITVSV--GSQTSNTNTDFSYNPPSITLITPNQGKYNQPS-SVVISGSNLGLPGQSLLTHILIGAVSCSNIQVQSSQSVSC 3717
BLAST of mRNA_M-pyrifera_M_contig77189.18192.1 vs. uniprot
Match: A0A7I8VM73_9ANNE (DgyrCDS5681 n=1 Tax=Dimorphilus gyrociliatus TaxID=2664684 RepID=A0A7I8VM73_9ANNE) HSP 1 Score: 55.1 bits (131), Expect = 4.270e-5 Identity = 63/224 (28.12%), Postives = 101/224 (45.09%), Query Frame = 1 Query: 4 ITKVTPNDVATLPGEYRKFYIEGSNFGNSLEGPSKALVGGQLCDPVVFVNSSFLECRNVSMAQWKET-AVRVTVGGVEGQGNVFSFTGSPTIVGIVPSSAPTTGNVWMNITGSNLGAGNGESDLSFITVGGVEC-LEIDSMNGGDKARCLIPPGVGAKLTIAVKTKDGLRAAIDNLFSYNP---PTISSISPNSVVTG-ALTYEVVITGTNLAARNVTVGGVSC 657 IT + P T G I GSNFG + + S VG C P + + +EC + A + A+ G GN SF+G+PT+ + P++ G + + G+ A D+S I + G +C L+ +++ + C+ PP + +T+ +K G D + Y P +SSI+P + G ALT T+ A VTVGG++C Sbjct: 1861 ITAINP----TSGGASTTITITGSNFGTNKDDLSLK-VGEADCIPKDGLTDTQVECDLAASAVGANSLALEKVNAGSAIVGNSVSFSGTPTLDSVNPTTGSANGGTIITLIGNGFSA-----DIS-IRIAGQDCVLKSRTLS---RVTCVTPPFIA--MTVTIKITSGSTEFPDINYEYTDLATPIVSSINPTTGTGGDALTITGSDFNTDAATNAVTVGGLAC 2068 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig77189.18192.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 7
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig77189.18192.1 >prot_M-pyrifera_M_contig77189.18192.1 ID=prot_M-pyrifera_M_contig77189.18192.1|Name=mRNA_M-pyrifera_M_contig77189.18192.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=232bp TITKVTPNDVATLPGEYRKFYIEGSNFGNSLEGPSKALVGGQLCDPVVFVback to top mRNA from alignment at M-pyrifera_M_contig77189:179..916+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig77189.18192.1 ID=mRNA_M-pyrifera_M_contig77189.18192.1|Name=mRNA_M-pyrifera_M_contig77189.18192.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=738bp|location=Sequence derived from alignment at M-pyrifera_M_contig77189:179..916+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig77189:179..916+ >mRNA_M-pyrifera_M_contig77189.18192.1 ID=mRNA_M-pyrifera_M_contig77189.18192.1|Name=mRNA_M-pyrifera_M_contig77189.18192.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1392bp|location=Sequence derived from alignment at M-pyrifera_M_contig77189:179..916+ (Macrocystis pyrifera P11B4 male)back to top |