mRNA_M-pyrifera_M_contig77137.18182.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig77137.18182.1
Unique NamemRNA_M-pyrifera_M_contig77137.18182.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig77137.18182.1 vs. uniprot
Match: D7G544_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G544_ECTSI)

HSP 1 Score: 406 bits (1043), Expect = 2.540e-136
Identity = 198/264 (75.00%), Postives = 223/264 (84.47%), Query Frame = 1
Query:    1 IFDDPHVNGLRGQRYDWCGQDGGWYAFLSIKDQLQMNLRVTSHLPTTFSERQLVTGVAVVIDSGHTITVDIVDPLDLAPTCQITANAARPGSNSAPCLVNGGLRVTVDGREEMPGAGEYHFHGGIHITAVNLPLECQRFGDYLMWGNLGEEEKLIHASRSLRSAGPVTSIFDWLLEDSVMIAPPWCVRYLEELHGDVTALAGLQSNHAVLRIRSPNLSLRVNVGINSEEAQTLQDGRVVPSASFWQMDVRVEDAEGSTTAKGML 792
            I+DDPH+ GLRGQ +DW GQDGGWYAFLS  DQLQMNLRVTSHLP TF ERQLVTGVA+V + GHTIT DIVDPLDLAPTC  T +A      SAPCLVNGGLR+TVDGRE++ GAGEY F G IHITAVNLPLECQRFGDY+MWG+L  E++L   SRSLRSA    ++FDWL+ DSVMIAP WCV+YL+EL+GDVTALA ++S+HAVLRI +PNLSLRVNVGIN+E  QTLQDGRVVP+ASFWQMDVRVE AEG  TAKGML
Sbjct:  242 IWDDPHLTGLRGQHFDWYGQDGGWYAFLSTPDQLQMNLRVTSHLPATFPERQLVTGVALVTEGGHTITADIVDPLDLAPTCHGTVDAV----GSAPCLVNGGLRITVDGREQLQGAGEYDFDGDIHITAVNLPLECQRFGDYMMWGDLDVEQRLRGGSRSLRSA---ETVFDWLVADSVMIAPAWCVKYLKELNGDVTALASMKSSHAVLRIGTPNLSLRVNVGINTEREQTLQDGRVVPTASFWQMDVRVEHAEGMATAKGML 498          
BLAST of mRNA_M-pyrifera_M_contig77137.18182.1 vs. uniprot
Match: D8LMW2_ECTSI (Imm upregulated 3 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMW2_ECTSI)

HSP 1 Score: 214 bits (544), Expect = 3.750e-64
Identity = 126/327 (38.53%), Postives = 191/327 (58.41%), Query Frame = 1
Query:    1 IFDDPHVNGLRGQRYDWCGQDGGWYAFLSIKDQ---LQMNLRVTSHLPTTFSERQLVTGVAVVIDSGHTITVDIVDPLDLAPTCQITANAARPGSNSAPCLVNGGLRVTVDGRE---------EMPGAGEYHFHGGIHITAVNLPLECQRFGDYLMWGNLGEEEKLIHASRSLRSAGPVTSIFDWLLE-DSVMIAPPWCVRYLEELHGDVTALAGLQSNHAVLRIRSPNLSLRVNVGINSE-EAQTLQDGRVVPSASFWQMDVRVEDAEGSTTA-KGMLGETARPVHDKQTGKAVMSGLGVLRGDVEDYRVMHPLGTEFKQLFVPEE 936
            ++ DPH+ GLRGQR +W G DGGWY+   +KD    L +N+RVT+ LP  F +RQL+T +A+ +  G+++ +++ +P  +     +T       S   PCL NGGLR+ VDG+E         +MP A      G + ++A NLP+EC++FG + +W  + ++  ++   R LR      S+ +W+L  D  M A  WC +Y+ E       LA LQ+NHA+ +I++P +++R+N G+N + + +   DGRV+P   FWQMDV ++  +    A  G+LGETARPV+  + G+AVM G    RG VEDYRV   LG  F  L   EE
Sbjct:   12 MWGDPHMRGLRGQRINWSGVDGGWYSL--VKDDHADLSINVRVTAPLPDEFPDRQLMTSLAI-MSEGYSVVIEVENPYTI-----VTGGCPEGVS---PCLANGGLRIIVDGQEVDELLRFSRQMPVAD-----GTMTMSASNLPVECRQFGGHRIWARMYQD--ILEDRRQLRGG---ESLEEWILRYDQNMPARRWCAKYIAE-----NDLADLQANHAIFKIQTPTVTVRLNAGVNYQGDGELNWDGRVLPDLEFWQMDVGIDGLDVDNPALSGLLGETARPVYG-ENGEAVMEGSDAFRGTVEDYRVSSALGVHFALLDEKEE 311          
BLAST of mRNA_M-pyrifera_M_contig77137.18182.1 vs. uniprot
Match: A0A6H5JS96_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JS96_9PHAE)

HSP 1 Score: 210 bits (534), Expect = 1.770e-61
Identity = 123/323 (38.08%), Postives = 185/323 (57.28%), Query Frame = 1
Query:    1 IFDDPHVNGLRGQRYDWCGQDGGWYAFLSIKDQ---LQMNLRVTSHLPTTFSERQLVTGVAVVIDSGHTITVDIVDPLDLAPTCQITANAARPGSNSAPCLVNGGLRVTVDGREEMPGAGEYHFH-----GGIHITAVNLPLECQRFGDYLMWGNLGEEEKLIHASRSLRSAGPVTSIFDWLLE-DSVMIAPPWCVRYLEELHGDVTALAGLQSNHAVLRIRSPNLSLRVNVGINSEEAQTLQ-DGRVVPSASFWQMDVRVEDAEGSTTA-KGMLGETARPVHDKQTGKAVMSGLGVLRGDVEDYRVMHPLGTEFKQLFVPEE 936
            +  DPH+ GLRGQR DW G DGGWY+   IKD    + +N+R+T+ LP  F +RQL+T +AV +  GH++ +++ +P        +  N    G +  PCL NGGLR+ VD  +++     +  H     G + +++ NLP+ECQ+FG   +W  + ++  +I   R L       S+ +W+L+ D  M AP WC +Y+ E       LA LQS+HA+ +I++P +++R+N G+N +    L  DGRV+P   FWQM V ++  +    A  G+LGETARPV+D + G+ VM G    RG +EDYRV   L   F  L   EE
Sbjct:  111 VCGDPHMQGLRGQRIDWSGVDGGWYSL--IKDDNIDININVRLTAPLPDEFPDRQLMTSLAV-LSKGHSVVIEVENPYT------VVTNGCPEGVS--PCLANGGLRIIVDS-QQVDELLRFSRHVPVADGAMTVSSSNLPVECQQFGGDRIWARMYQD--MIEGRRELHGD---ESLEEWILKYDHGMAAPGWCAKYIAE-----NDLADLQSDHAIFKIQTPTVTVRLNAGVNYQGNGELNWDGRVLPDLEFWQMGVGMDGLDVDNPALSGLLGETARPVYD-ENGQVVMEGFDAFRGTIEDYRVSDALDVHFPLLDEKEE 410          
BLAST of mRNA_M-pyrifera_M_contig77137.18182.1 vs. uniprot
Match: A0A6H5JP37_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JP37_9PHAE)

HSP 1 Score: 183 bits (465), Expect = 1.630e-52
Identity = 114/313 (36.42%), Postives = 167/313 (53.35%), Query Frame = 1
Query:    1 IFDDPHVNGLRGQRYDWCGQDGGWYAFLSIKDQ---LQMNLRVTSHLPTTFSERQLVTGVAVVIDSGHTITVDIVDPLDLAPTCQITANAARPGSNSAPCLVNGGLRVTVDGREEMPGAGEYHFHGGIHITAVNLPLECQRFGDYLMWGNLGEEEKLIHASRSLRSAGPVTSIFDWLLE-DSVMIAPPWCVRYLEELHGDVTALAGLQSNHAVLRIRSPNLSLRVNVGINSEEAQTLQ-DGRVVPSASFWQMDVRVEDAEGSTTA-KGMLGETARPVHDKQTGKAVMSGLGVLRGDVEDYRVMHPLGTEFKQL 921
            I+ DPH+ GL GQR +W G DGGWY+   IKD    L +N+RVT+ LP  F +RQL+T +A+ +  G+++ +++ +P         T +      + +PC  NGGLR+ VDG                H     L    Q  G   +W  + ++  ++   R LR      S+ +W+L  D  M A  WC +Y+ E       LA LQ+NHA+ +I++P +++R+N G+N +    L  DGRV+P   FWQ+DV ++  +    A  G+ GETA PV+D + GKAVM G    RG VEDYRV   LG  F  L
Sbjct:   17 IWGDPHMRGLLGQRVNWSGFDGGWYSL--IKDDNADLHINVRVTAPLPDEFPDRQLMTSLAI-MSEGYSVVIEVKNPY--------TTDTGGCPEDVSPCHANGGLRIIVDG----------------HEVDELLRFSRQMPGGKRIWARMYQD--ILEGRRQLRGG---ESLEEWILRYDQNMPARTWCAKYIAE-----NDLADLQANHAIFKIQTPTVTVRLNAGVNYQSNGELNWDGRVLPDLEFWQIDVGIDGLDVDKPALSGLFGETACPVYD-ENGKAVMEGYDAFRGAVEDYRVSSALGVHFALL 291          
BLAST of mRNA_M-pyrifera_M_contig77137.18182.1 vs. uniprot
Match: A0A6H5JW46_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JW46_9PHAE)

HSP 1 Score: 177 bits (448), Expect = 5.020e-49
Identity = 105/306 (34.31%), Postives = 164/306 (53.59%), Query Frame = 1
Query:   10 DPHVNGLRGQRYDWCGQDGGWYAFLSIKDQLQMNLRVTSHLPTTFSERQLVTGVAVVIDSG----HTITVDIVDPLDLAPTCQITANAARPGSNSAPCLVNGGLRVTVDGREEMPGAGEYHFHGGIHITAVNLPLECQRFGDYLMWGNLGEEEKLIHASRSLRSAGPVTSIFDWLLEDSVMIAPPWCVRYLEELHGDVTALAGLQSNHAVLRIRSPNLSLRVNVGINSEEAQTLQDGRV-VPSASFWQMDVRVEDAEGSTTAKGMLGETARPVHDKQTGKAVMSGLGVLRGDVEDYRVMHPLGTEF 912
            DPH+ G  GQ++D+ G+DGG+YA +S    + MN+RVTS +P+   E   +TG++++        H+I +++ +P D+   C          +  +PCL +G LRV ++G+EE+   G      G+ +TAVNLP EC+ FG    W     E K +  +R  R  G   S+ DWLL D        C+ Y+ +  G    L  LQS HA  +I +P  ++R++ G   + A      R  +P  + WQM++ ++  E S +A G+LGET+ P  D   G+ +M+G+  +RG  EDYRV  PL   F
Sbjct:   90 DPHMTGFLGQKFDFTGEDGGYYALISDFPNMHMNMRVTSPVPS-LPEITYITGLSLLTTDANGEVHSIVIEVKNPHDIESACP---------AGVSPCLADGSLRVMLNGKEELSAPGSVALADGVIVTAVNLPGECRSFGFEHYW-----ERKKLENARHGRHLGE-QSMGDWLLGDPTATNMDECMEYVAQAEGQAGGLFALQSEHASFQIVTPTATVRLSHGRLHQIATRDPTNRFDLPDHTTWQMNMGIDHNEVSYSATGILGETSTPTKDAY-GQDIMTGMEAIRGSEEDYRVAGPLDVTF 378          
BLAST of mRNA_M-pyrifera_M_contig77137.18182.1 vs. uniprot
Match: A0A6H5KVF3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVF3_9PHAE)

HSP 1 Score: 153 bits (386), Expect = 1.980e-38
Identity = 96/311 (30.87%), Postives = 156/311 (50.16%), Query Frame = 1
Query:    1 IFDDPHVNGLRGQRYDWCGQDGGWYAFLSIKDQLQMNLRVTSHLPTTFSERQLVTGVAVVIDSG----HTITVDIVDPLDLAPTCQITANAARPGSNSAPCLVNGGLRVTVDGREEMPGAGEYHFHGGIHITAVNLPLECQRFGDYLMWGNLGEEEKLIHASRSLRSAGPVTSIFDWLLEDSVMIAPPWCVRYLEELHGDVTALAGLQSNHAVLRIRSPNLSLRVNVGINSEEAQTLQDGRV-VPSASFWQMDVRVEDAEGSTTAKGMLGETARPVHDKQTGKAVMSGLGVLRGDVEDYRVMHPLGTEFKQ 918
            I  DPH+ G  GQ++D+ G+DGGWY+ ++  + + +N+RVTS +     E   +TG++V+        H+I ++++DP +L  +C          +  +PCL +G L V +DG E +   G       + ++A NLP  C+ FG    W     E K +  +R+ R      S+ +W+L D        CV Y+     +   +   QS H   +I +P  ++R++ G   + A      R  +P    WQM++ +   + S  AKG+LG+T  P  D   GK +M+GL  +RG  EDYRV   LG +F Q
Sbjct:  316 ICGDPHMTGFLGQKFDFTGEDGGWYSVIADSN-MNVNMRVTSPV-ADLPEITYITGLSVLTTDTDGLEHSIVIEVIDPHNLDSSCP---------AGVSPCLGDGALVVLLDGVESLFAPGTVALGADVEVSAANLPGACRSFGFEKYW-----ERKKLENARAGRLLRTTPSMGEWILGDPTATNMNECVEYVARAEAEEGGVFAHQSEHVSFQIVTPKATVRLSHGRLHQIAMRDPTDRFDLPDHLTWQMNMAIHHEDVSHAAKGILGQTFVPTRDAD-GKPIMTGLEAIRGSEEDYRVDGALGVDFVQ 609          
BLAST of mRNA_M-pyrifera_M_contig77137.18182.1 vs. uniprot
Match: A0A6H5L5Y7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5Y7_9PHAE)

HSP 1 Score: 140 bits (352), Expect = 1.980e-35
Identity = 96/307 (31.27%), Postives = 154/307 (50.16%), Query Frame = 1
Query:   13 PHVNGLRGQRYDWCGQDGGWYAFLSIKDQLQMNLRVTS------HLPTT---------FSERQLVTGVAVVIDSGHTITVDIVDPLDLAPTCQITANAARPGSNSAPCLVNGGLRVTVDGREEMPGAGEYHFHGGIHITAVNLPLECQRFGDYLMWGNLGEEEKLIHAS--RSLRSAGPVTSIFDWLLEDSVMIAPPWCVRYLEELHGDVTALAGLQSNHAVLRIRSPNLSLRVNVG-INSEEAQTLQDGRVVPSASFWQMDVRVEDAEGSTTAKGMLGETARPVHDKQTGKAVMSGLGVLRGDVED 879
            PH+ G  GQ++D+ G+DGGWY+ ++  + + +N+RVTS        PT+           ER+L         S H+I +++ +P  L  +C          +  +PCL +G LRV +DG E +   G      G+ I+AVNLP  C+ FG    W    E +KL +A+  R LR+     S+ +W+L D        CV Y+     +   +   QS HA  +I +P  ++R++ G ++    +   D   +P    WQM++ V+  + S  AKG+LGET  P  D  +GK +M+G+  +RG  ED
Sbjct:   11 PHMTGFLGQKFDFTGEDGGWYSIIADSN-MNVNMRVTSPSSTCPRSPTSQRLGAYSSAVLERRLSVLTTDADGSDHSIVIEVAEPHSLDSSCP---------AGVSPCLADGALRVLLDGDEALFAHGTVSLGLGVEISAVNLPGACRSFGFEKYW----EHKKLEYATGGRQLRTQ---PSMGEWILGDPTATNMDECVEYVARAEAEEGGMFAHQSEHASFQIVTPAATVRLSHGRLHQIAMRDPTDQYDLPDHLTWQMNLAVDHNQVSYAAKGILGETFVPTRDA-SGKPIMTGMEAIRGTEED 299          
BLAST of mRNA_M-pyrifera_M_contig77137.18182.1 vs. uniprot
Match: A0A6H5K7V7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7V7_9PHAE)

HSP 1 Score: 142 bits (358), Expect = 2.000e-35
Identity = 94/309 (30.42%), Postives = 148/309 (47.90%), Query Frame = 1
Query:   10 DPHVNGLRGQRYDWCGQDGGWYAFLSIKDQLQMNLRVTSHLPTTFSERQLVTGVAV----VIDSGHTITVDIVDPLDLAPTCQITANAARPGSNSAPCLVNGGLRVTVDGREEMPGAGEYHFHGGIHITAVNLPLECQRFGDYLMWGNLGEEEKLIHASRSLRSAGPVTSIFDWLLEDSVMIAPPWCVRYLEELHGDVTALAGL---QSNHAVLRIRSPNLSLRVNVGINSEEAQTLQDGRV-VPSASFWQMDVRVEDAEGSTTAKGMLGETARPVHDKQTGKAVMSGLGVLRGDVEDYRVMHPLGTEF 912
            DPH+ G  GQ++D+ GQDG WYA +S    L++N+RVTS +P    E   +TG+ +    +    H++ + + DP  L   C +  +          CL +G L V +DG   +   GE     G+ I+AVNLP  C+ FG    W    ++ + + + R L +   +  + DW+L D        C  Y+  L   V   AGL    S H   +I +P  ++R++ G   + A      R  +P    WQM++  ++ + +  A G+LGET +   D   G  +M G+  +RG  EDY V  PL   F
Sbjct:  140 DPHMTGFLGQKFDFVGQDGEWYAVVSDMPDLEVNMRVTSPVPAE-PEITYITGLGIKTRDIEGLDHSLVITVTDPHSLDSACPVQGST---------CLADGALTVELDGDVALLSPGEAELGPGVAISAVNLPGACRSFGFEKYWER--KKAEYVASGRRLNNDLQMQEMSDWILGDPTATNMAECTEYV--LGATVDGQAGLFEYDSEHTSFQIVTPKGTIRLSHGRLHQLAMRDPTDRFDIPDHLTWQMNLAFDNVDLAVDATGILGETQQHTLDAN-GNPIMEGMAAIRGSQEDYLVDGPLDNVF 433          
BLAST of mRNA_M-pyrifera_M_contig77137.18182.1 vs. uniprot
Match: A0A6H5KRS2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRS2_9PHAE)

HSP 1 Score: 138 bits (347), Expect = 3.350e-34
Identity = 88/302 (29.14%), Postives = 145/302 (48.01%), Query Frame = 1
Query:   10 DPHVNGLRGQRYDWCGQDGGWYAFLSIKDQLQMNLRVTSHLPTTFSERQLVTGVAVVIDSG----HTITVDIVDPLDLAPTCQITANAARPGSNSAPCLVNGGLRVTVDGREEMPGAGEYHFHGGIHITAVNLPLECQRFGDYLMWGNLGEEEKLIHASRS-LRSAGPVTSIFDWLLEDSVMIAPPWCVRYLEE--LHGDVTALAGLQSNHAVLRIRSPNLSLRVNVGINSEEAQTLQDGRVVPSASFWQMDVRVEDAEGSTTAKGMLGETARPVHDKQTGKAVMSGLGVLRGDVEDYRVMH 894
            DPH+ G  GQ++D+ G DG WY  +S    + +N+RVT+ +P+   +   +TG++++   G    H++ + + DP  L  +C          +   PCL NG L V++DG+E +   G       + ++ VNLP  C+ FG    W    E +KL +A     R +     + DW+L D        C  Y+    + G    L   +S HA  +I  P  ++R++ G   + AQ       +P  S WQM++ ++       A+G+LGET  P  D   G+ VM G+  +RG  E+  + H
Sbjct:   57 DPHMTGFHGQKFDFTGDDGEWYCLISDLPSMNLNMRVTAPVPSR-PDITYITGISLITQDGNGLDHSVVITVKDPHSLESSCP---------AGVTPCLANGALSVSLDGKEALSAPGVVEMAPNMKVSVVNLPGACRSFGFEKYW----ERKKLEYAQAGGRRLSSKDQDMGDWILGDPTATNMAECTEYVARHVVEGGDGGLFAHKSEHASFQIVMPIATVRLSHGRLHQIAQY-----GLPDHSTWQMNLAIDSDSVGVGAQGVLGETLVPTRDAD-GEYVMHGMESIRGTQEECELAH 338          
BLAST of mRNA_M-pyrifera_M_contig77137.18182.1 vs. uniprot
Match: A0A6H5L2W0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2W0_9PHAE)

HSP 1 Score: 119 bits (299), Expect = 2.300e-28
Identity = 83/294 (28.23%), Postives = 136/294 (46.26%), Query Frame = 1
Query:   19 VNGLRGQRYDWCGQDGGWYAFLSIKDQLQMNLRVTSHLPTTFSERQLVTGVAVVIDSG----HTITVDIVDPLDLAPTCQITANAARPGSNSAPCLVNGGLRVTVDGREEMPGAGEYHFHGGIHITAVNLPLECQRFGDYLMWGNLGEEEKLIHASRSLRSAGPVTSIFDWLLEDSVMIAPPWCVRYLEELHGDVTALAGLQSN---HAVLRIRSPNLSLRVNVGINSEEAQTLQDGRVVPSASFWQMDVRVEDAEGSTTAKGMLGETARPVHDKQTGKAVMSGLGVLRGDVED 879
            + G RGQ++D+ GQDGGWY+  S   ++ +N+R  S +P+   E   +TG+ +         HTI + + DP  L   C +  +         PCL +G L V +DG+  +   GE  F   + I+AVNLP  C+ FG    W    ++++     R L S+  + ++ DW+L D        C  Y+ E   +   L GL  +   H   +I +P  ++R                 +    SF  M++ ++  + S  A G+LGET +P  D   G  +M G+  +RG  +D
Sbjct:    1 MTGFRGQKFDFTGQDGGWYSVHSDMPRIHLNMRARSLVPSV-PEITYITGLGITTTDANGLDHTIVITVTDPHSLDSACPVGVS---------PCLADGALTVQLDGKHALLAPGEVLFGPQVAISAVNLPGACRSFGFEEYWER--KKQEYARGGRRLPSSTQMQAMSDWILGDPTATNMAECTEYVVEATRN--GLGGLFEHDLEHTSFQILTPMGTIR---------------RAMAAFTSFPCMNLAIDRIDVSPNATGILGETQKPTLDAN-GSPIMQGMASIRGAQDD 264          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig77137.18182.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 10
Match NameE-valueIdentityDescription
D7G544_ECTSI2.540e-13675.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LMW2_ECTSI3.750e-6438.53Imm upregulated 3 n=1 Tax=Ectocarpus siliculosus T... [more]
A0A6H5JS96_9PHAE1.770e-6138.08Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JP37_9PHAE1.630e-5236.42Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JW46_9PHAE5.020e-4934.31Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KVF3_9PHAE1.980e-3830.87Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L5Y7_9PHAE1.980e-3531.27Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K7V7_9PHAE2.000e-3530.42Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KRS2_9PHAE3.350e-3429.14Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L2W0_9PHAE2.300e-2828.23Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig77137contigM-pyrifera_M_contig77137:33..971 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons1
Model size939
Cds size939
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816672.4012964-CDS-M-pyrifera_M_contig77137:32..9711622816672.4012964-CDS-M-pyrifera_M_contig77137:32..971Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig77137 33..971 -
1692278110.9423056-CDS-M-pyrifera_M_contig77137:32..9711692278110.9423056-CDS-M-pyrifera_M_contig77137:32..971Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig77137 33..971 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig77137.18182.1prot_M-pyrifera_M_contig77137.18182.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig77137 33..971 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig77137.18182.1

>prot_M-pyrifera_M_contig77137.18182.1 ID=prot_M-pyrifera_M_contig77137.18182.1|Name=mRNA_M-pyrifera_M_contig77137.18182.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=313bp
IFDDPHVNGLRGQRYDWCGQDGGWYAFLSIKDQLQMNLRVTSHLPTTFSE
RQLVTGVAVVIDSGHTITVDIVDPLDLAPTCQITANAARPGSNSAPCLVN
GGLRVTVDGREEMPGAGEYHFHGGIHITAVNLPLECQRFGDYLMWGNLGE
EEKLIHASRSLRSAGPVTSIFDWLLEDSVMIAPPWCVRYLEELHGDVTAL
AGLQSNHAVLRIRSPNLSLRVNVGINSEEAQTLQDGRVVPSASFWQMDVR
VEDAEGSTTAKGMLGETARPVHDKQTGKAVMSGLGVLRGDVEDYRVMHPL
GTEFKQLFVPEE*
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mRNA from alignment at M-pyrifera_M_contig77137:33..971-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig77137.18182.1 ID=mRNA_M-pyrifera_M_contig77137.18182.1|Name=mRNA_M-pyrifera_M_contig77137.18182.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=939bp|location=Sequence derived from alignment at M-pyrifera_M_contig77137:33..971- (Macrocystis pyrifera P11B4 male)
ATATTCGACGACCCGCACGTGAATGGCCTCCGTGGCCAGCGCTACGACTG GTGCGGTCAAGACGGCGGCTGGTACGCCTTTCTGTCCATTAAAGACCAAC TCCAGATGAACCTTCGCGTGACTTCTCACCTGCCCACAACGTTTTCCGAA CGCCAACTGGTGACCGGCGTTGCAGTCGTGATTGATAGCGGCCATACGAT CACGGTGGATATCGTGGACCCCCTCGACCTCGCACCTACTTGCCAGATCA CCGCGAACGCTGCCAGGCCCGGATCTAACTCGGCACCCTGTCTGGTCAAC GGCGGTCTGCGTGTGACTGTGGATGGGCGCGAGGAGATGCCGGGCGCCGG TGAGTACCACTTCCACGGCGGAATCCACATCACCGCCGTCAATCTCCCCC TCGAGTGCCAGCGGTTCGGCGACTACCTCATGTGGGGTAACCTCGGCGAG GAGGAGAAGCTCATACACGCGAGTCGTAGTCTGCGGTCCGCTGGGCCAGT CACGTCCATTTTTGACTGGCTGCTGGAAGACTCCGTAATGATTGCCCCGC CGTGGTGCGTGAGGTACCTCGAAGAGCTCCACGGCGATGTGACCGCCCTC GCCGGGCTTCAGTCCAACCATGCCGTGCTGCGGATCCGTTCGCCTAATCT GTCCCTTCGTGTGAACGTGGGCATCAACAGCGAGGAAGCGCAGACTCTGC AAGACGGCCGTGTTGTACCTTCTGCCTCGTTCTGGCAGATGGACGTGCGC GTCGAGGATGCCGAAGGCAGTACGACCGCCAAGGGAATGCTCGGCGAGAC TGCTCGGCCCGTCCATGACAAGCAGACCGGGAAAGCTGTGATGTCGGGTC TCGGTGTGCTTCGTGGCGATGTGGAGGACTACAGGGTCATGCACCCGCTC GGAACCGAGTTCAAGCAGCTATTCGTCCCGGAGGAGTGA
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig77137:33..971-

>mRNA_M-pyrifera_M_contig77137.18182.1 ID=mRNA_M-pyrifera_M_contig77137.18182.1|Name=mRNA_M-pyrifera_M_contig77137.18182.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1878bp|location=Sequence derived from alignment at M-pyrifera_M_contig77137:33..971- (Macrocystis pyrifera P11B4 male)
ATATTCGACGACCCGCACGTGAATGGCCTCCGTGGCCAGCGCTACGACTG
GTGCGGTCAAGACGGCGGCTGGTACGCCTTTCTGTCCATTAAAGACCAAC
TCCAGATGAACCTTCGCGTGACTTCTCACCTGCCCACAACGTTTTCCGAA
CGCCAACTGGTGACCGGCGTTGCAGTCGTGATTGATAGCGGCCATACGAT
CACGGTGGATATCGTGGACCCCCTCGACCTCGCACCTACTTGCCAGATCA
CCGCGAACGCTGCCAGGCCCGGATCTAACTCGGCACCCTGTCTGGTCAAC
GGCGGTCTGCGTGTGACTGTGGATGGGCGCGAGGAGATGCCGGGCGCCGG
TGAGTACCACTTCCACGGCGGAATCCACATCACCGCCGTCAATCTCCCCC
TCGAGTGCCAGCGGTTCGGCGACTACCTCATGTGGGGTAACCTCGGCGAG
GAGGAGAAGCTCATACACGCGAGTCGTAGTCTGCGGTCCGCTGGGCCAGT
CACGTCCATTTTTGACTGGCTGCTGGAAGACTCCGTAATGATTGCCCCGC
CGTGGTGCGTGAGGTACCTCGAAGAGCTCCACGGCGATGTGACCGCCCTC
GCCGGGCTTCAGTCCAACCATGCCGTGCTGCGGATCCGTTCGCCTAATCT
GTCCCTTCGTGTGAACGTGGGCATCAACAGCGAGGAAGCGCAGACTCTGC
AAGACGGCCGTGTTGTACCTTCTGCCTCGTTCTGGCAGATGGACGTGCGC
GTCGAGGATGCCGAAGGCAGTACGACCGCCAAGGGAATGCTCGGCGAGAC
TGCTCGGCCCGTCCATGACAAGCAGACCGGGAAAGCTGTGATGTCGGGTC
TCGGTGTGCTTCGTGGCGATGTGGAGGACTACAGGGTCATGCACCCGCTC
GGAACCGAGTTCAAGCAGCTATTCGTCCCGGAGGAGTGAATATTCGACGA
CCCGCACGTGAATGGCCTCCGTGGCCAGCGCTACGACTGGTGCGGTCAAG
ACGGCGGCTGGTACGCCTTTCTGTCCATTAAAGACCAACTCCAGATGAAC
CTTCGCGTGACTTCTCACCTGCCCACAACGTTTTCCGAACGCCAACTGGT
GACCGGCGTTGCAGTCGTGATTGATAGCGGCCATACGATCACGGTGGATA
TCGTGGACCCCCTCGACCTCGCACCTACTTGCCAGATCACCGCGAACGCT
GCCAGGCCCGGATCTAACTCGGCACCCTGTCTGGTCAACGGCGGTCTGCG
TGTGACTGTGGATGGGCGCGAGGAGATGCCGGGCGCCGGTGAGTACCACT
TCCACGGCGGAATCCACATCACCGCCGTCAATCTCCCCCTCGAGTGCCAG
CGGTTCGGCGACTACCTCATGTGGGGTAACCTCGGCGAGGAGGAGAAGCT
CATACACGCGAGTCGTAGTCTGCGGTCCGCTGGGCCAGTCACGTCCATTT
TTGACTGGCTGCTGGAAGACTCCGTAATGATTGCCCCGCCGTGGTGCGTG
AGGTACCTCGAAGAGCTCCACGGCGATGTGACCGCCCTCGCCGGGCTTCA
GTCCAACCATGCCGTGCTGCGGATCCGTTCGCCTAATCTGTCCCTTCGTG
TGAACGTGGGCATCAACAGCGAGGAAGCGCAGACTCTGCAAGACGGCCGT
GTTGTACCTTCTGCCTCGTTCTGGCAGATGGACGTGCGCGTCGAGGATGC
CGAAGGCAGTACGACCGCCAAGGGAATGCTCGGCGAGACTGCTCGGCCCG
TCCATGACAAGCAGACCGGGAAAGCTGTGATGTCGGGTCTCGGTGTGCTT
CGTGGCGATGTGGAGGACTACAGGGTCATGCACCCGCTCGGAACCGAGTT
CAAGCAGCTATTCGTCCCGGAGGAGTGA
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