mRNA_M-pyrifera_M_contig77125.18177.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig77125.18177.1
Unique NamemRNA_M-pyrifera_M_contig77125.18177.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig77125.18177.1 vs. uniprot
Match: A0A7S1C7F8_9STRA (Transmembrane 9 superfamily member n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1C7F8_9STRA)

HSP 1 Score: 237 bits (605), Expect = 3.480e-69
Identity = 132/285 (46.32%), Postives = 178/285 (62.46%), Query Frame = 1
Query:    4 VAFVLIRTLRADVSRYLRAADDDGIDAAAAAAALEAALVDESGWKQVRGDVFRRPMSPEMFAALLGSGAQLTGMGIGTVLAALAGSLYVDRGSVSAAMLILYALTSFLAGIVSGAWYRRQFHPRPAPSWKHVMFLTASLFPILGATVILNLNLLAGYYNTVNAIPFSTVVFILLAWATVNLPLVVAGTLLGRSWCGTRKRLPRINPVPRPVPTHRFLTHPVTLALLAGVAPFCSIFIETYFIFASFWGYRVYYVFELLXXXXXXXXXXXXCVSVVVTYVLLSVED 858
            VA +L++ LR D ++Y+R  D++ +D +      E  + DESGWK V GDVFRRP    +FAAL G+G QL  +    VL AL GSLYVDRG+++   ++ YALTS ++G  SG++YR  F+P P+P W   M LTA L P     VI  LN +A  Y+TVNAIPF+T+V + L WA V++PLVVAGT LGR   G      R+N +P P+P  R+   PV + L  GV PF SIFIE Y++F SFW Y+ YYV+  +            CV++V TY+LL+ ED
Sbjct:  413 VALILLKVLRNDYAKYMR--DEEDLDDS------EKGMGDESGWKLVHGDVFRRPDHLALFAALTGTGYQLAFLVAAVVLVALMGSLYVDRGAITTVSIVAYALTSVVSGYASGSYYRAHFYPNPSPGWIKTMLLTALLCPFTVFAVIFALNFVAIAYSTVNAIPFATMVSVFLIWAFVSVPLVVAGTYLGRHLGGHASWPCRVNHIPHPIPPRRWFFSPVVVCLATGVLPFGSIFIEMYYVFTSFWNYKFYYVYGFMLLVYTILVIVIACVTIVSTYLLLNSED 689          
BLAST of mRNA_M-pyrifera_M_contig77125.18177.1 vs. uniprot
Match: A0A1Y1IFS9_KLENI (Transmembrane 9 superfamily member n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1IFS9_KLENI)

HSP 1 Score: 218 bits (554), Expect = 5.240e-63
Identity = 122/286 (42.66%), Postives = 173/286 (60.49%), Query Frame = 1
Query:    1 LVAFVLIRTLRADVSRYLRAADDDGIDAAAAAAALEAALVDESGWKQVRGDVFRRPMSPEMFAALLGSGAQLTGMGIGTVLAALAGSLYVDRGSVSAAMLILYALTSFLAGIVSGAWYRRQFHPRPAPSWKHVMFLTASLFPILGATVILNLNLLAGYYNTVNAIPFSTVVFILLAWATVNLPLVVAGTLLGRSWCGTRKRLPRINPVPRPVPTHRFLTHPVTLALLAGVAPFCSIFIETYFIFASFWGYRVYYVFELLXXXXXXXXXXXXCVSVVVTYVLLSVED 858
            LV+ +L+RTLR D ++Y R  DD           LE  + +ESGWK V GDVFR P +  + AAL+G+GAQL  + +  ++ A+ G LYV RG++  A +I YALTSF+AG VSG +Y R         W   M LTASLFP     +   LN +A +Y+++ AIPF T+V + L WA ++ PL +AGT++GR+W G      R+  +PRP+P  ++   P  +A++ G+ PF SIFIE YFIF SFW Y+VYYV+  +            CV++V TY LL+ E+
Sbjct:  249 LVSMILMRTLRNDYAKYAREEDD--------LETLERDVSEESGWKLVHGDVFRAPRNLVLLAALVGTGAQLALLILSVIIIAIIGMLYVGRGTIVTAFIICYALTSFVAGYVSGGFYSRS----DGKHWIKSMLLTASLFPFASFGIGFILNTVAIFYHSLAAIPFGTMVVVFLIWAFISFPLCLAGTVVGRNWSGVPDNPCRVKTIPRPIPQKKWYLTPTVVAIMGGLLPFGSIFIEMYFIFTSFWNYKVYYVYGFMLLVFIILVIVTVCVTIVGTYFLLNAEN 522          
BLAST of mRNA_M-pyrifera_M_contig77125.18177.1 vs. uniprot
Match: I0YSS0_COCSC (Transmembrane 9 superfamily member n=2 Tax=Coccomyxa TaxID=41891 RepID=I0YSS0_COCSC)

HSP 1 Score: 217 bits (552), Expect = 1.240e-62
Identity = 120/286 (41.96%), Postives = 178/286 (62.24%), Query Frame = 1
Query:    1 LVAFVLIRTLRADVSRYLRAADDDGIDAAAAAAALEAALVDESGWKQVRGDVFRRPMSPEMFAALLGSGAQLTGMGIGTVLAALAGSLYVDRGSVSAAMLILYALTSFLAGIVSGAWYRRQFHPRPAPSWKHVMFLTASLFPILGATVILNLNLLAGYYNTVNAIPFSTVVFILLAWATVNLPLVVAGTLLGRSWCGTRKRLPRINPVPRPVPTHRFLTHPVTLALLAGVAPFCSIFIETYFIFASFWGYRVYYVFELLXXXXXXXXXXXXCVSVVVTYVLLSVED 858
            LV+ +L+RTLRAD +RY  A DDD ++A      LE  + +ESGWK V GDVFR P   E+ AAL+G+G QL  + +  +L  +AG+L+ +RG++    ++ YALTSF+AG VSG +Y R        +W   M LTA+LFP+L  ++   LN +A  Y+++ A+PF ++V +LL W  ++ PL + GT++GR+W G      R+  +P P+P  ++   P  +AL+ G+ PF SIFIE YFIF SFW Y+VYYV+  +            CV++V TY LL+ E+
Sbjct:  258 LVSMILMRTLRADYARYT-ARDDDDLEA------LERDVGEESGWKLVHGDVFRPPRYLELLAALVGTGVQLALLVLSVILITIAGTLFTERGTIVTVFIVCYALTSFVAGYVSGGFYARN----AGKTWIPTMLLTANLFPLLCFSIASVLNTIAIAYHSLAAVPFGSIVVVLLIWMFLSFPLCLFGTVVGRNWNGLPDNPCRVKRIPSPIPARQWYLRPTVIALMGGLLPFGSIFIEMYFIFTSFWNYKVYYVYGFMLLVFLILAIMTVCVTIVGTYFLLNAEN 532          
BLAST of mRNA_M-pyrifera_M_contig77125.18177.1 vs. uniprot
Match: A0A8J5GQJ2_ZINOF (Transmembrane 9 superfamily member n=8 Tax=Zingiber officinale TaxID=94328 RepID=A0A8J5GQJ2_ZINOF)

HSP 1 Score: 216 bits (550), Expect = 1.430e-62
Identity = 119/286 (41.61%), Postives = 177/286 (61.89%), Query Frame = 1
Query:    1 LVAFVLIRTLRADVSRYLRAADDDGIDAAAAAAALEAALVDESGWKQVRGDVFRRPMSPEMFAALLGSGAQLTGMGIGTVLAALAGSLYVDRGSVSAAMLILYALTSFLAGIVSGAWYRRQFHPRPAPSWKHVMFLTASLFPILGATVILNLNLLAGYYNTVNAIPFSTVVFILLAWATVNLPLVVAGTLLGRSWCGTRKRLPRINPVPRPVPTHRFLTHPVTLALLAGVAPFCSIFIETYFIFASFWGYRVYYVFELLXXXXXXXXXXXXCVSVVVTYVLLSVED 858
            LV+ +L+RTLR D ++Y R  +DD ++       LE  + +ESGWK V GDVFR P S  + +AL+G+GAQLT + +  +L A+ G+LY+ RGS+    ++ YALTSF++G VSG  Y R        SW   M +TASLFP L   +   LN +A +Y ++ AIPF T+V + + WA ++ PL + GT++GR+W G+     R+  +PRP+P  ++   P  ++L+ G+ PF SIFIE YF+F SFW Y+VYYV+  +            CV++V TY LL+ E+
Sbjct:  231 LVSMILMRTLRNDYAKYAR--EDDDLET------LERDVSEESGWKLVHGDVFRPPHSLVLLSALVGTGAQLTTLILLVILLAIVGTLYIGRGSIITTFIVCYALTSFISGYVSGGLYSRN----GGKSWIKAMIVTASLFPFLCFGIGFLLNTIAIFYGSLAAIPFGTMVVVFVLWAFISFPLALLGTVVGRNWSGSPNNPCRVKTIPRPIPEKKWYLTPSVVSLMGGLLPFGSIFIEMYFVFTSFWNYKVYYVYGFMLLVFLILLIVTICVTIVGTYFLLNAEN 504          
BLAST of mRNA_M-pyrifera_M_contig77125.18177.1 vs. uniprot
Match: UPI000C1D4847 (transmembrane 9 superfamily member 1-like n=3 Tax=Olea europaea var. sylvestris TaxID=158386 RepID=UPI000C1D4847)

HSP 1 Score: 215 bits (547), Expect = 4.160e-62
Identity = 121/286 (42.31%), Postives = 185/286 (64.69%), Query Frame = 1
Query:    1 LVAFVLIRTLRADVSRYLRAADDDGIDAAAAAAALEAALVDESGWKQVRGDVFRRPMSPEMFAALLGSGAQLTGMGIGTVLAALAGSLYVDRGSVSAAMLILYALTSFLAGIVSGAWYRRQFHPRPAPSWKHVMFLTASLFPILGATVILNLNLLAGYYNTVNAIPFSTVVFILLAWATVNLPLVVAGTLLGRSWCGTRKRLPRINPVPRPVPTHRFLTHPVTLALLAGVAPFCSIFIETYFIFASFWGYRVYYVFELLXXXXXXXXXXXXCVSVVVTYVLLSVED 858
            LV+ +L+RTLR D ++Y R  +DD ++       +E  + +ESGWK V GDVFR P++  + +A++G+GAQL  + +  ++ A+ G LY+ RG++    ++ YALTSF+AG +SG+ Y R        SW   M LTASLFP++   +   LN +A +Y ++ AIP  T+V +L+ WA ++LPL + GT++GR+W GT     R+  +PRP+P  ++   P  ++L+ G+ PF SIFIE YF+F SFW Y+VYYV+  +    XXXXXX  CV++V TY LL+ E+
Sbjct:  234 LVSMILMRTLRNDYAKYTR--EDDDLET------MERDVNEESGWKLVHGDVFRPPINLSLLSAVVGTGAQLATLVLLVIILAIIGMLYIGRGAIVTTFIVCYALTSFIAGYISGSMYSRN----GGKSWIKSMILTASLFPLMCFLIGFVLNTIAIFYGSLAAIPVGTIVVVLVIWAFISLPLSLLGTVVGRNWSGTPDNPCRVKTIPRPIPEKKWYLTPTVISLMGGLLPFGSIFIEMYFVFTSFWNYKVYYVYGFMLLVVXXXXXXTVCVTIVGTYFLLNAEN 507          
BLAST of mRNA_M-pyrifera_M_contig77125.18177.1 vs. uniprot
Match: A0A453K7A8_AEGTS (Transmembrane 9 superfamily member n=1 Tax=Aegilops tauschii subsp. strangulata TaxID=200361 RepID=A0A453K7A8_AEGTS)

HSP 1 Score: 212 bits (540), Expect = 5.490e-62
Identity = 117/286 (40.91%), Postives = 173/286 (60.49%), Query Frame = 1
Query:    1 LVAFVLIRTLRADVSRYLRAADDDGIDAAAAAAALEAALVDESGWKQVRGDVFRRPMSPEMFAALLGSGAQLTGMGIGTVLAALAGSLYVDRGSVSAAMLILYALTSFLAGIVSGAWYRRQFHPRPAPSWKHVMFLTASLFPILGATVILNLNLLAGYYNTVNAIPFSTVVFILLAWATVNLPLVVAGTLLGRSWCGTRKRLPRINPVPRPVPTHRFLTHPVTLALLAGVAPFCSIFIETYFIFASFWGYRVYYVFELLXXXXXXXXXXXXCVSVVVTYVLLSVED 858
            LV+ +L+RTLR D ++Y R  DDD +++      LE  + +ESGWK V GDVFR P S  + +AL+G G QL  + +  ++ A+ G LYV RG++    ++ YALTSF++G VS   Y R        +W   M LTASLFP L   +   LN +A +Y ++ AIPF T+V + + WA ++ PLV+ GT++GR+W G      R+  +PRP+P  ++   P  ++L+ G+ PF SIFIE YF+F SFW Y+VYYV+  +            CV++V TY LL+ E+
Sbjct:  135 LVSMILMRTLRNDYAKYAR--DDDDLES------LERDVNEESGWKLVHGDVFRPPRSLTLLSALVGIGTQLAALILLVIVLAIVGMLYVGRGAIITTFIVCYALTSFISGYVSAGLYSRN----GGKNWIKAMILTASLFPFLHFAIGFALNTIAIFYGSLAAIPFGTMVVMFVLWAFISFPLVLLGTVVGRNWSGAPNNPCRVKTIPRPIPERKWYLTPSVISLMGGLLPFGSIFIEMYFVFTSFWNYKVYYVYGFMLLVFVILLIVTICVTIVGTYFLLNAEN 408          
BLAST of mRNA_M-pyrifera_M_contig77125.18177.1 vs. uniprot
Match: UPI00051C5CDD (transmembrane 9 superfamily member 1-like n=1 Tax=Nicotiana tomentosiformis TaxID=4098 RepID=UPI00051C5CDD)

HSP 1 Score: 214 bits (546), Expect = 6.180e-62
Identity = 119/286 (41.61%), Postives = 175/286 (61.19%), Query Frame = 1
Query:    1 LVAFVLIRTLRADVSRYLRAADDDGIDAAAAAAALEAALVDESGWKQVRGDVFRRPMSPEMFAALLGSGAQLTGMGIGTVLAALAGSLYVDRGSVSAAMLILYALTSFLAGIVSGAWYRRQFHPRPAPSWKHVMFLTASLFPILGATVILNLNLLAGYYNTVNAIPFSTVVFILLAWATVNLPLVVAGTLLGRSWCGTRKRLPRINPVPRPVPTHRFLTHPVTLALLAGVAPFCSIFIETYFIFASFWGYRVYYVFELLXXXXXXXXXXXXCVSVVVTYVLLSVED 858
            LV+ +L+RTLR D ++Y R  +DD ++       LE  + +ESGWK V GDVFR P +  + +AL+G+GAQL  + +  +L A+ G LYV RG++    ++ YALTSF++G VSGA Y R        SW   M LTASLFP L   +   LN +A +Y ++ AIPF T+V + + WA ++ PL + GT++GR+W G      R+  +PRP+P  ++   P  ++L+ G+ PF SIFIE YF+F SFW Y+VYYV+  +            CV++V TY LL+ E+
Sbjct:  237 LVSMILMRTLRNDYAKYAR--EDDDLET------LERDVSEESGWKLVHGDVFRTPRTLVLLSALVGTGAQLALLVLLVILLAIVGMLYVGRGAIVTTFIVCYALTSFISGYVSGAMYSRN----GGKSWIKSMILTASLFPFLCFGIGFILNTIAIFYGSLAAIPFGTMVVVFVIWAFISFPLALLGTVVGRNWSGAPNNPCRVKTIPRPIPVKKWYLTPSVISLMGGLLPFGSIFIEMYFVFTSFWNYKVYYVYGFMLLVFLILIVVTVCVTIVGTYFLLNAEN 510          
BLAST of mRNA_M-pyrifera_M_contig77125.18177.1 vs. uniprot
Match: A9U2F6_PHYPA (Transmembrane 9 superfamily member n=3 Tax=Physcomitrium patens TaxID=3218 RepID=A9U2F6_PHYPA)

HSP 1 Score: 214 bits (546), Expect = 6.420e-62
Identity = 121/286 (42.31%), Postives = 172/286 (60.14%), Query Frame = 1
Query:    1 LVAFVLIRTLRADVSRYLRAADDDGIDAAAAAAALEAALVDESGWKQVRGDVFRRPMSPEMFAALLGSGAQLTGMGIGTVLAALAGSLYVDRGSVSAAMLILYALTSFLAGIVSGAWYRRQFHPRPAPSWKHVMFLTASLFPILGATVILNLNLLAGYYNTVNAIPFSTVVFILLAWATVNLPLVVAGTLLGRSWCGTRKRLPRINPVPRPVPTHRFLTHPVTLALLAGVAPFCSIFIETYFIFASFWGYRVYYVFELLXXXXXXXXXXXXCVSVVVTYVLLSVED 858
            LV+ +L+RTLR D ++Y R  DD           LE  + +ESGWK V GDVFR P +  + +AL+G+GAQL  + +  +L A+ G LYV RG++    ++ YALTSF+AG VSG +Y R         W   M LTASLFP L   +   LN +A YY+++ AIPF T+V + + WA ++ PL + GT++GR+W G      R+  +PRP+P  ++   P  +ALL G+ PF SIFIE YF+F SFW Y+VYYV+  +            CV++V TY LL+ E+
Sbjct:  239 LVSMILMRTLRNDYAKYAREEDD--------LETLERDVSEESGWKLVHGDVFRAPRNLVLLSALVGTGAQLAMLMLLVILLAIVGMLYVGRGAIVTTFIVCYALTSFIAGYVSGGFYSRN----DGKHWIKSMLLTASLFPFLCFGIGFLLNFVAIYYHSLAAIPFGTMVVVFVIWAFISFPLALFGTVVGRNWSGQPDNPCRVKTIPRPIPEKKWYLKPSVVALLGGLLPFGSIFIEMYFVFTSFWQYKVYYVYGFMLLVFIILTIVTVCVTIVGTYFLLNAEN 512          
BLAST of mRNA_M-pyrifera_M_contig77125.18177.1 vs. uniprot
Match: A0A2G3AU96_CAPCH (Transmembrane 9 superfamily member n=1 Tax=Capsicum chinense TaxID=80379 RepID=A0A2G3AU96_CAPCH)

HSP 1 Score: 219 bits (557), Expect = 6.510e-62
Identity = 121/286 (42.31%), Postives = 176/286 (61.54%), Query Frame = 1
Query:    1 LVAFVLIRTLRADVSRYLRAADDDGIDAAAAAAALEAALVDESGWKQVRGDVFRRPMSPEMFAALLGSGAQLTGMGIGTVLAALAGSLYVDRGSVSAAMLILYALTSFLAGIVSGAWYRRQFHPRPAPSWKHVMFLTASLFPILGATVILNLNLLAGYYNTVNAIPFSTVVFILLAWATVNLPLVVAGTLLGRSWCGTRKRLPRINPVPRPVPTHRFLTHPVTLALLAGVAPFCSIFIETYFIFASFWGYRVYYVFELLXXXXXXXXXXXXCVSVVVTYVLLSVED 858
            LV+ +L+RTLR D ++Y R  +DD ++       LE  + +ESGWK V GDVFR P+S  + +AL+G+GAQL  + +  +L A+ G LYV RGS+    ++ YALTSF++G VSGA Y R        SW   M LTASLFP L   +   LN +A +Y ++ AIPF T+V + + WA ++ PL + GT++GR+W G      R+  +PRP+P  ++   P  ++L+ G+ PF SIFIE YF+F SFW Y+VYYV+  +            CV++V TY LL+ E+
Sbjct:  486 LVSMILMRTLRNDYAKYAR--EDDDLET------LERDVSEESGWKLVHGDVFRTPLSLVLLSALVGTGAQLALLVLLVILLAIVGMLYVGRGSIVTTFIVCYALTSFISGYVSGAMYSRN----GGKSWIKSMILTASLFPFLCFGIGFVLNTIAIFYGSLAAIPFGTIVVVFVIWAFISFPLALLGTVVGRNWSGAPNNPCRVKTIPRPIPVKKWYLTPSVISLMGGLLPFGSIFIEMYFVFTSFWNYKVYYVYGFMLLVFLILIVVTVCVTIVGTYFLLNAEN 759          
BLAST of mRNA_M-pyrifera_M_contig77125.18177.1 vs. uniprot
Match: A0A7I8L564_SPIIN (Transmembrane 9 superfamily member n=2 Tax=Spirodela intermedia TaxID=51605 RepID=A0A7I8L564_SPIIN)

HSP 1 Score: 214 bits (544), Expect = 9.420e-62
Identity = 121/286 (42.31%), Postives = 172/286 (60.14%), Query Frame = 1
Query:    1 LVAFVLIRTLRADVSRYLRAADDDGIDAAAAAAALEAALVDESGWKQVRGDVFRRPMSPEMFAALLGSGAQLTGMGIGTVLAALAGSLYVDRGSVSAAMLILYALTSFLAGIVSGAWYRRQFHPRPAPSWKHVMFLTASLFPILGATVILNLNLLAGYYNTVNAIPFSTVVFILLAWATVNLPLVVAGTLLGRSWCGTRKRLPRINPVPRPVPTHRFLTHPVTLALLAGVAPFCSIFIETYFIFASFWGYRVYYVFELLXXXXXXXXXXXXCVSVVVTYVLLSVED 858
            LV+ +L+RTLR D ++Y R  DD          ALE  + +ESGWK V GDVFR P S  + +AL+G+GAQL  + +  +L A+ G+LYV RG++    ++ YALTSF++G VSG  Y R        +W   M LTASLFP     V   LN +A +Y T+ AIP  T+V +L+ WA ++ PL + GT++GR+W G      R+  +PRP+P  ++   P  ++L+ G+ PF SIFIE YF+F SFW Y+VYYVF  +            CV++V TY LL+ E+
Sbjct:  224 LVSMILMRTLRKDYAKYAREEDD--------LEALERDVNEESGWKLVHGDVFRPPQSLALLSALVGTGAQLAMLVLLVILLAIIGTLYVGRGAIVTTFIVCYALTSFISGYVSGGLYSRS----SGKNWIRSMILTASLFPFTCFGVGFVLNTIAIFYRTLAAIPLGTMVVVLVIWAFISFPLALLGTVVGRNWNGAPNNPCRVKTIPRPIPDKKWYLTPPVISLMGGLLPFGSIFIEMYFVFTSFWHYKVYYVFGFMLLVFLILVIVTVCVTIVGTYFLLNAEN 497          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig77125.18177.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S1C7F8_9STRA3.480e-6946.32Transmembrane 9 superfamily member n=1 Tax=Bicosoe... [more]
A0A1Y1IFS9_KLENI5.240e-6342.66Transmembrane 9 superfamily member n=1 Tax=Klebsor... [more]
I0YSS0_COCSC1.240e-6241.96Transmembrane 9 superfamily member n=2 Tax=Coccomy... [more]
A0A8J5GQJ2_ZINOF1.430e-6241.61Transmembrane 9 superfamily member n=8 Tax=Zingibe... [more]
UPI000C1D48474.160e-6242.31transmembrane 9 superfamily member 1-like n=3 Tax=... [more]
A0A453K7A8_AEGTS5.490e-6240.91Transmembrane 9 superfamily member n=1 Tax=Aegilop... [more]
UPI00051C5CDD6.180e-6241.61transmembrane 9 superfamily member 1-like n=1 Tax=... [more]
A9U2F6_PHYPA6.420e-6242.31Transmembrane 9 superfamily member n=3 Tax=Physcom... [more]
A0A2G3AU96_CAPCH6.510e-6242.31Transmembrane 9 superfamily member n=1 Tax=Capsicu... [more]
A0A7I8L564_SPIIN9.420e-6242.31Transmembrane 9 superfamily member n=2 Tax=Spirode... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig77125contigM-pyrifera_M_contig77125:3..1013 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeViridiplantae
Seed ortholog score216.1
Seed ortholog evalue2.2e-53
Seed eggNOG ortholog248742.XP_005645983.1
Preferred nameTM9SF3
KEGG koko:K17087
Hectar predicted targeting categorymitochondrion
GOsGO:0005575,GO:0016020,GO:0016021,GO:0031224,GO:0044425
EggNOG free text desc.Belongs to the nonaspanin (TM9SF) (TC 9.A.2) family
EggNOG OGs34H1F@3041,37QY7@33090,KOG1277@2759,KOG1278@1
COG Functional cat.U
Best tax levelChlorophyta
Best eggNOG OGNA|NA|NA
BRITEko00000,ko04147
Exons2
Model size858
Cds size858
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816672.1771395-CDS-M-pyrifera_M_contig77125:2..831622816672.1771395-CDS-M-pyrifera_M_contig77125:2..83Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig77125 3..83 +
1692278110.8207357-CDS-M-pyrifera_M_contig77125:2..831692278110.8207357-CDS-M-pyrifera_M_contig77125:2..83Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig77125 3..83 +
1622816672.1875288-CDS-M-pyrifera_M_contig77125:236..10131622816672.1875288-CDS-M-pyrifera_M_contig77125:236..1013Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig77125 237..1013 +
1692278110.837485-CDS-M-pyrifera_M_contig77125:236..10131692278110.837485-CDS-M-pyrifera_M_contig77125:236..1013Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig77125 237..1013 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig77125.18177.1prot_M-pyrifera_M_contig77125.18177.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig77125 3..1013 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig77125.18177.1

>prot_M-pyrifera_M_contig77125.18177.1 ID=prot_M-pyrifera_M_contig77125.18177.1|Name=mRNA_M-pyrifera_M_contig77125.18177.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=286bp
LVAFVLIRTLRADVSRYLRAADDDGIDAAAAAAALEAALVDESGWKQVRG
DVFRRPMSPEMFAALLGSGAQLTGMGIGTVLAALAGSLYVDRGSVSAAML
ILYALTSFLAGIVSGAWYRRQFHPRPAPSWKHVMFLTASLFPILGATVIL
NLNLLAGYYNTVNAIPFSTVVFILLAWATVNLPLVVAGTLLGRSWCGTRK
RLPRINPVPRPVPTHRFLTHPVTLALLAGVAPFCSIFIETYFIFASFWGY
RVYYVFELLLLVVIVLVIVVSCVSVVVTYVLLSVED
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mRNA from alignment at M-pyrifera_M_contig77125:3..1013+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig77125.18177.1 ID=mRNA_M-pyrifera_M_contig77125.18177.1|Name=mRNA_M-pyrifera_M_contig77125.18177.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=1011bp|location=Sequence derived from alignment at M-pyrifera_M_contig77125:3..1013+ (Macrocystis pyrifera P11B4 male)
CTCGTTGCCTTTGTGCTCATTCGCACCTTGCGAGCAGACGTATCACGCTA CCTTCGTGCTGCAGACGATGATGGAATCGACGTCGAAGCCGCTACCTCTT CCTCCTCCTCTTCCTCCACGCCACAGAAAGGTGGGAGAGGCAGAAGAGCG GTGGCTAGAGATCACGGGAGCGATGAGGAGGCGGAGGAGGAAGGTGGCGA GGAGGAGGAGAACGGGAGCAGTGTCACGGACGAGGCAGCTGCGGCTGCTG CAGCTCTGGAAGCTGCATTGGTGGACGAGAGTGGCTGGAAGCAGGTGCGA GGAGACGTGTTCCGTCGTCCCATGTCACCCGAAATGTTTGCTGCTCTGTT GGGATCTGGGGCGCAATTGACGGGAATGGGCATTGGAACGGTTTTGGCTG CACTTGCTGGGTCCTTGTACGTGGACCGAGGCAGTGTGTCCGCCGCAATG CTTATCCTCTACGCGCTCACTTCCTTCCTCGCCGGGATTGTGTCTGGAGC GTGGTATCGCCGCCAGTTCCACCCTCGCCCCGCTCCTTCCTGGAAACACG TCATGTTCCTCACAGCCTCCCTCTTCCCCATCCTCGGGGCCACTGTCATC CTCAACCTCAACCTCCTCGCGGGGTACTACAACACGGTCAACGCCATCCC CTTCTCCACAGTCGTCTTCATCCTCCTCGCATGGGCCACCGTCAACCTAC CCCTCGTCGTCGCTGGAACACTCCTTGGAAGATCCTGGTGTGGCACTCGA AAACGACTCCCTCGTATCAACCCAGTACCACGACCAGTACCCACCCACCG CTTCCTCACCCACCCCGTCACTCTTGCCCTGCTCGCCGGCGTCGCTCCCT TCTGCTCCATCTTCATCGAAACCTACTTCATCTTCGCTTCCTTCTGGGGA TACAGAGTCTACTACGTCTTCGAACTCCTCCTCCTCGTCGTCATCGTCCT CGTCATCGTCGTCTCCTGCGTCTCCGTCGTTGTCACCTACGTCCTCCTCT CCGTCGAAGAC
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig77125:3..1013+

>mRNA_M-pyrifera_M_contig77125.18177.1 ID=mRNA_M-pyrifera_M_contig77125.18177.1|Name=mRNA_M-pyrifera_M_contig77125.18177.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1716bp|location=Sequence derived from alignment at M-pyrifera_M_contig77125:3..1013+ (Macrocystis pyrifera P11B4 male)
CTCGTTGCCTTTGTGCTCATTCGCACCTTGCGAGCAGACGTATCACGCTA
CCTTCGTGCTGCAGACGATGATGGAATCGACCTCGTTGCCTTTGTGCTCA
TTCGCACCTTGCGAGCAGACGTATCACGCTACCTTCGTGCTGCAGACGAT
GATGGAATCGACGCAGCTGCGGCTGCTGCAGCTCTGGAAGCTGCATTGGT
GGACGAGAGTGGCTGGAAGCAGGTGCGAGGAGACGTGTTCCGTCGTCCCA
TGTCACCCGAAATGTTTGCTGCTCTGTTGGGATCTGGGGCGCAATTGACG
GGAATGGGCATTGGAACGGTTTTGGCTGCACTTGCTGGGTCCTTGTACGT
GGACCGAGGCAGTGTGTCCGCCGCAATGCTTATCCTCTACGCGCTCACTT
CCTTCCTCGCCGGGATTGTGTCTGGAGCGTGGTATCGCCGCCAGTTCCAC
CCTCGCCCCGCTCCTTCCTGGAAACACGTCATGTTCCTCACAGCCTCCCT
CTTCCCCATCCTCGGGGCCACTGTCATCCTCAACCTCAACCTCCTCGCGG
GGTACTACAACACGGTCAACGCCATCCCCTTCTCCACAGTCGTCTTCATC
CTCCTCGCATGGGCCACCGTCAACCTACCCCTCGTCGTCGCTGGAACACT
CCTTGGAAGATCCTGGTGTGGCACTCGAAAACGACTCCCTCGTATCAACC
CAGTACCACGACCAGTACCCACCCACCGCTTCCTCACCCACCCCGTCACT
CTTGCCCTGCTCGCCGGCGTCGCTCCCTTCTGCTCCATCTTCATCGAAAC
CTACTTCATCTTCGCTTCCTTCTGGGGATACAGAGTCTACTACGTCTTCG
AACTCCTCCTCCTCGTCGTCATCGTCCTCGTCATCGTCGTCTCCTGCGTC
TCCGTCGTTGTCACCTACGTCCTCCTCTCCGTCGAAGACGCAGCTGCGGC
TGCTGCAGCTCTGGAAGCTGCATTGGTGGACGAGAGTGGCTGGAAGCAGG
TGCGAGGAGACGTGTTCCGTCGTCCCATGTCACCCGAAATGTTTGCTGCT
CTGTTGGGATCTGGGGCGCAATTGACGGGAATGGGCATTGGAACGGTTTT
GGCTGCACTTGCTGGGTCCTTGTACGTGGACCGAGGCAGTGTGTCCGCCG
CAATGCTTATCCTCTACGCGCTCACTTCCTTCCTCGCCGGGATTGTGTCT
GGAGCGTGGTATCGCCGCCAGTTCCACCCTCGCCCCGCTCCTTCCTGGAA
ACACGTCATGTTCCTCACAGCCTCCCTCTTCCCCATCCTCGGGGCCACTG
TCATCCTCAACCTCAACCTCCTCGCGGGGTACTACAACACGGTCAACGCC
ATCCCCTTCTCCACAGTCGTCTTCATCCTCCTCGCATGGGCCACCGTCAA
CCTACCCCTCGTCGTCGCTGGAACACTCCTTGGAAGATCCTGGTGTGGCA
CTCGAAAACGACTCCCTCGTATCAACCCAGTACCACGACCAGTACCCACC
CACCGCTTCCTCACCCACCCCGTCACTCTTGCCCTGCTCGCCGGCGTCGC
TCCCTTCTGCTCCATCTTCATCGAAACCTACTTCATCTTCGCTTCCTTCT
GGGGATACAGAGTCTACTACGTCTTCGAACTCCTCCTCCTCGTCGTCATC
GTCCTCGTCATCGTCGTCTCCTGCGTCTCCGTCGTTGTCACCTACGTCCT
CCTCTCCGTCGAAGAC
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