mRNA_M-pyrifera_M_contig77125.18177.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig77125.18177.1 vs. uniprot
Match: A0A7S1C7F8_9STRA (Transmembrane 9 superfamily member n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1C7F8_9STRA) HSP 1 Score: 237 bits (605), Expect = 3.480e-69 Identity = 132/285 (46.32%), Postives = 178/285 (62.46%), Query Frame = 1 Query: 4 VAFVLIRTLRADVSRYLRAADDDGIDAAAAAAALEAALVDESGWKQVRGDVFRRPMSPEMFAALLGSGAQLTGMGIGTVLAALAGSLYVDRGSVSAAMLILYALTSFLAGIVSGAWYRRQFHPRPAPSWKHVMFLTASLFPILGATVILNLNLLAGYYNTVNAIPFSTVVFILLAWATVNLPLVVAGTLLGRSWCGTRKRLPRINPVPRPVPTHRFLTHPVTLALLAGVAPFCSIFIETYFIFASFWGYRVYYVFELLXXXXXXXXXXXXCVSVVVTYVLLSVED 858 VA +L++ LR D ++Y+R D++ +D + E + DESGWK V GDVFRRP +FAAL G+G QL + VL AL GSLYVDRG+++ ++ YALTS ++G SG++YR F+P P+P W M LTA L P VI LN +A Y+TVNAIPF+T+V + L WA V++PLVVAGT LGR G R+N +P P+P R+ PV + L GV PF SIFIE Y++F SFW Y+ YYV+ + CV++V TY+LL+ ED Sbjct: 413 VALILLKVLRNDYAKYMR--DEEDLDDS------EKGMGDESGWKLVHGDVFRRPDHLALFAALTGTGYQLAFLVAAVVLVALMGSLYVDRGAITTVSIVAYALTSVVSGYASGSYYRAHFYPNPSPGWIKTMLLTALLCPFTVFAVIFALNFVAIAYSTVNAIPFATMVSVFLIWAFVSVPLVVAGTYLGRHLGGHASWPCRVNHIPHPIPPRRWFFSPVVVCLATGVLPFGSIFIEMYYVFTSFWNYKFYYVYGFMLLVYTILVIVIACVTIVSTYLLLNSED 689
BLAST of mRNA_M-pyrifera_M_contig77125.18177.1 vs. uniprot
Match: A0A1Y1IFS9_KLENI (Transmembrane 9 superfamily member n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1IFS9_KLENI) HSP 1 Score: 218 bits (554), Expect = 5.240e-63 Identity = 122/286 (42.66%), Postives = 173/286 (60.49%), Query Frame = 1 Query: 1 LVAFVLIRTLRADVSRYLRAADDDGIDAAAAAAALEAALVDESGWKQVRGDVFRRPMSPEMFAALLGSGAQLTGMGIGTVLAALAGSLYVDRGSVSAAMLILYALTSFLAGIVSGAWYRRQFHPRPAPSWKHVMFLTASLFPILGATVILNLNLLAGYYNTVNAIPFSTVVFILLAWATVNLPLVVAGTLLGRSWCGTRKRLPRINPVPRPVPTHRFLTHPVTLALLAGVAPFCSIFIETYFIFASFWGYRVYYVFELLXXXXXXXXXXXXCVSVVVTYVLLSVED 858 LV+ +L+RTLR D ++Y R DD LE + +ESGWK V GDVFR P + + AAL+G+GAQL + + ++ A+ G LYV RG++ A +I YALTSF+AG VSG +Y R W M LTASLFP + LN +A +Y+++ AIPF T+V + L WA ++ PL +AGT++GR+W G R+ +PRP+P ++ P +A++ G+ PF SIFIE YFIF SFW Y+VYYV+ + CV++V TY LL+ E+ Sbjct: 249 LVSMILMRTLRNDYAKYAREEDD--------LETLERDVSEESGWKLVHGDVFRAPRNLVLLAALVGTGAQLALLILSVIIIAIIGMLYVGRGTIVTAFIICYALTSFVAGYVSGGFYSRS----DGKHWIKSMLLTASLFPFASFGIGFILNTVAIFYHSLAAIPFGTMVVVFLIWAFISFPLCLAGTVVGRNWSGVPDNPCRVKTIPRPIPQKKWYLTPTVVAIMGGLLPFGSIFIEMYFIFTSFWNYKVYYVYGFMLLVFIILVIVTVCVTIVGTYFLLNAEN 522
BLAST of mRNA_M-pyrifera_M_contig77125.18177.1 vs. uniprot
Match: I0YSS0_COCSC (Transmembrane 9 superfamily member n=2 Tax=Coccomyxa TaxID=41891 RepID=I0YSS0_COCSC) HSP 1 Score: 217 bits (552), Expect = 1.240e-62 Identity = 120/286 (41.96%), Postives = 178/286 (62.24%), Query Frame = 1 Query: 1 LVAFVLIRTLRADVSRYLRAADDDGIDAAAAAAALEAALVDESGWKQVRGDVFRRPMSPEMFAALLGSGAQLTGMGIGTVLAALAGSLYVDRGSVSAAMLILYALTSFLAGIVSGAWYRRQFHPRPAPSWKHVMFLTASLFPILGATVILNLNLLAGYYNTVNAIPFSTVVFILLAWATVNLPLVVAGTLLGRSWCGTRKRLPRINPVPRPVPTHRFLTHPVTLALLAGVAPFCSIFIETYFIFASFWGYRVYYVFELLXXXXXXXXXXXXCVSVVVTYVLLSVED 858 LV+ +L+RTLRAD +RY A DDD ++A LE + +ESGWK V GDVFR P E+ AAL+G+G QL + + +L +AG+L+ +RG++ ++ YALTSF+AG VSG +Y R +W M LTA+LFP+L ++ LN +A Y+++ A+PF ++V +LL W ++ PL + GT++GR+W G R+ +P P+P ++ P +AL+ G+ PF SIFIE YFIF SFW Y+VYYV+ + CV++V TY LL+ E+ Sbjct: 258 LVSMILMRTLRADYARYT-ARDDDDLEA------LERDVGEESGWKLVHGDVFRPPRYLELLAALVGTGVQLALLVLSVILITIAGTLFTERGTIVTVFIVCYALTSFVAGYVSGGFYARN----AGKTWIPTMLLTANLFPLLCFSIASVLNTIAIAYHSLAAVPFGSIVVVLLIWMFLSFPLCLFGTVVGRNWNGLPDNPCRVKRIPSPIPARQWYLRPTVIALMGGLLPFGSIFIEMYFIFTSFWNYKVYYVYGFMLLVFLILAIMTVCVTIVGTYFLLNAEN 532
BLAST of mRNA_M-pyrifera_M_contig77125.18177.1 vs. uniprot
Match: A0A8J5GQJ2_ZINOF (Transmembrane 9 superfamily member n=8 Tax=Zingiber officinale TaxID=94328 RepID=A0A8J5GQJ2_ZINOF) HSP 1 Score: 216 bits (550), Expect = 1.430e-62 Identity = 119/286 (41.61%), Postives = 177/286 (61.89%), Query Frame = 1 Query: 1 LVAFVLIRTLRADVSRYLRAADDDGIDAAAAAAALEAALVDESGWKQVRGDVFRRPMSPEMFAALLGSGAQLTGMGIGTVLAALAGSLYVDRGSVSAAMLILYALTSFLAGIVSGAWYRRQFHPRPAPSWKHVMFLTASLFPILGATVILNLNLLAGYYNTVNAIPFSTVVFILLAWATVNLPLVVAGTLLGRSWCGTRKRLPRINPVPRPVPTHRFLTHPVTLALLAGVAPFCSIFIETYFIFASFWGYRVYYVFELLXXXXXXXXXXXXCVSVVVTYVLLSVED 858 LV+ +L+RTLR D ++Y R +DD ++ LE + +ESGWK V GDVFR P S + +AL+G+GAQLT + + +L A+ G+LY+ RGS+ ++ YALTSF++G VSG Y R SW M +TASLFP L + LN +A +Y ++ AIPF T+V + + WA ++ PL + GT++GR+W G+ R+ +PRP+P ++ P ++L+ G+ PF SIFIE YF+F SFW Y+VYYV+ + CV++V TY LL+ E+ Sbjct: 231 LVSMILMRTLRNDYAKYAR--EDDDLET------LERDVSEESGWKLVHGDVFRPPHSLVLLSALVGTGAQLTTLILLVILLAIVGTLYIGRGSIITTFIVCYALTSFISGYVSGGLYSRN----GGKSWIKAMIVTASLFPFLCFGIGFLLNTIAIFYGSLAAIPFGTMVVVFVLWAFISFPLALLGTVVGRNWSGSPNNPCRVKTIPRPIPEKKWYLTPSVVSLMGGLLPFGSIFIEMYFVFTSFWNYKVYYVYGFMLLVFLILLIVTICVTIVGTYFLLNAEN 504
BLAST of mRNA_M-pyrifera_M_contig77125.18177.1 vs. uniprot
Match: UPI000C1D4847 (transmembrane 9 superfamily member 1-like n=3 Tax=Olea europaea var. sylvestris TaxID=158386 RepID=UPI000C1D4847) HSP 1 Score: 215 bits (547), Expect = 4.160e-62 Identity = 121/286 (42.31%), Postives = 185/286 (64.69%), Query Frame = 1 Query: 1 LVAFVLIRTLRADVSRYLRAADDDGIDAAAAAAALEAALVDESGWKQVRGDVFRRPMSPEMFAALLGSGAQLTGMGIGTVLAALAGSLYVDRGSVSAAMLILYALTSFLAGIVSGAWYRRQFHPRPAPSWKHVMFLTASLFPILGATVILNLNLLAGYYNTVNAIPFSTVVFILLAWATVNLPLVVAGTLLGRSWCGTRKRLPRINPVPRPVPTHRFLTHPVTLALLAGVAPFCSIFIETYFIFASFWGYRVYYVFELLXXXXXXXXXXXXCVSVVVTYVLLSVED 858 LV+ +L+RTLR D ++Y R +DD ++ +E + +ESGWK V GDVFR P++ + +A++G+GAQL + + ++ A+ G LY+ RG++ ++ YALTSF+AG +SG+ Y R SW M LTASLFP++ + LN +A +Y ++ AIP T+V +L+ WA ++LPL + GT++GR+W GT R+ +PRP+P ++ P ++L+ G+ PF SIFIE YF+F SFW Y+VYYV+ + XXXXXX CV++V TY LL+ E+ Sbjct: 234 LVSMILMRTLRNDYAKYTR--EDDDLET------MERDVNEESGWKLVHGDVFRPPINLSLLSAVVGTGAQLATLVLLVIILAIIGMLYIGRGAIVTTFIVCYALTSFIAGYISGSMYSRN----GGKSWIKSMILTASLFPLMCFLIGFVLNTIAIFYGSLAAIPVGTIVVVLVIWAFISLPLSLLGTVVGRNWSGTPDNPCRVKTIPRPIPEKKWYLTPTVISLMGGLLPFGSIFIEMYFVFTSFWNYKVYYVYGFMLLVVXXXXXXTVCVTIVGTYFLLNAEN 507
BLAST of mRNA_M-pyrifera_M_contig77125.18177.1 vs. uniprot
Match: A0A453K7A8_AEGTS (Transmembrane 9 superfamily member n=1 Tax=Aegilops tauschii subsp. strangulata TaxID=200361 RepID=A0A453K7A8_AEGTS) HSP 1 Score: 212 bits (540), Expect = 5.490e-62 Identity = 117/286 (40.91%), Postives = 173/286 (60.49%), Query Frame = 1 Query: 1 LVAFVLIRTLRADVSRYLRAADDDGIDAAAAAAALEAALVDESGWKQVRGDVFRRPMSPEMFAALLGSGAQLTGMGIGTVLAALAGSLYVDRGSVSAAMLILYALTSFLAGIVSGAWYRRQFHPRPAPSWKHVMFLTASLFPILGATVILNLNLLAGYYNTVNAIPFSTVVFILLAWATVNLPLVVAGTLLGRSWCGTRKRLPRINPVPRPVPTHRFLTHPVTLALLAGVAPFCSIFIETYFIFASFWGYRVYYVFELLXXXXXXXXXXXXCVSVVVTYVLLSVED 858 LV+ +L+RTLR D ++Y R DDD +++ LE + +ESGWK V GDVFR P S + +AL+G G QL + + ++ A+ G LYV RG++ ++ YALTSF++G VS Y R +W M LTASLFP L + LN +A +Y ++ AIPF T+V + + WA ++ PLV+ GT++GR+W G R+ +PRP+P ++ P ++L+ G+ PF SIFIE YF+F SFW Y+VYYV+ + CV++V TY LL+ E+ Sbjct: 135 LVSMILMRTLRNDYAKYAR--DDDDLES------LERDVNEESGWKLVHGDVFRPPRSLTLLSALVGIGTQLAALILLVIVLAIVGMLYVGRGAIITTFIVCYALTSFISGYVSAGLYSRN----GGKNWIKAMILTASLFPFLHFAIGFALNTIAIFYGSLAAIPFGTMVVMFVLWAFISFPLVLLGTVVGRNWSGAPNNPCRVKTIPRPIPERKWYLTPSVISLMGGLLPFGSIFIEMYFVFTSFWNYKVYYVYGFMLLVFVILLIVTICVTIVGTYFLLNAEN 408
BLAST of mRNA_M-pyrifera_M_contig77125.18177.1 vs. uniprot
Match: UPI00051C5CDD (transmembrane 9 superfamily member 1-like n=1 Tax=Nicotiana tomentosiformis TaxID=4098 RepID=UPI00051C5CDD) HSP 1 Score: 214 bits (546), Expect = 6.180e-62 Identity = 119/286 (41.61%), Postives = 175/286 (61.19%), Query Frame = 1 Query: 1 LVAFVLIRTLRADVSRYLRAADDDGIDAAAAAAALEAALVDESGWKQVRGDVFRRPMSPEMFAALLGSGAQLTGMGIGTVLAALAGSLYVDRGSVSAAMLILYALTSFLAGIVSGAWYRRQFHPRPAPSWKHVMFLTASLFPILGATVILNLNLLAGYYNTVNAIPFSTVVFILLAWATVNLPLVVAGTLLGRSWCGTRKRLPRINPVPRPVPTHRFLTHPVTLALLAGVAPFCSIFIETYFIFASFWGYRVYYVFELLXXXXXXXXXXXXCVSVVVTYVLLSVED 858 LV+ +L+RTLR D ++Y R +DD ++ LE + +ESGWK V GDVFR P + + +AL+G+GAQL + + +L A+ G LYV RG++ ++ YALTSF++G VSGA Y R SW M LTASLFP L + LN +A +Y ++ AIPF T+V + + WA ++ PL + GT++GR+W G R+ +PRP+P ++ P ++L+ G+ PF SIFIE YF+F SFW Y+VYYV+ + CV++V TY LL+ E+ Sbjct: 237 LVSMILMRTLRNDYAKYAR--EDDDLET------LERDVSEESGWKLVHGDVFRTPRTLVLLSALVGTGAQLALLVLLVILLAIVGMLYVGRGAIVTTFIVCYALTSFISGYVSGAMYSRN----GGKSWIKSMILTASLFPFLCFGIGFILNTIAIFYGSLAAIPFGTMVVVFVIWAFISFPLALLGTVVGRNWSGAPNNPCRVKTIPRPIPVKKWYLTPSVISLMGGLLPFGSIFIEMYFVFTSFWNYKVYYVYGFMLLVFLILIVVTVCVTIVGTYFLLNAEN 510
BLAST of mRNA_M-pyrifera_M_contig77125.18177.1 vs. uniprot
Match: A9U2F6_PHYPA (Transmembrane 9 superfamily member n=3 Tax=Physcomitrium patens TaxID=3218 RepID=A9U2F6_PHYPA) HSP 1 Score: 214 bits (546), Expect = 6.420e-62 Identity = 121/286 (42.31%), Postives = 172/286 (60.14%), Query Frame = 1 Query: 1 LVAFVLIRTLRADVSRYLRAADDDGIDAAAAAAALEAALVDESGWKQVRGDVFRRPMSPEMFAALLGSGAQLTGMGIGTVLAALAGSLYVDRGSVSAAMLILYALTSFLAGIVSGAWYRRQFHPRPAPSWKHVMFLTASLFPILGATVILNLNLLAGYYNTVNAIPFSTVVFILLAWATVNLPLVVAGTLLGRSWCGTRKRLPRINPVPRPVPTHRFLTHPVTLALLAGVAPFCSIFIETYFIFASFWGYRVYYVFELLXXXXXXXXXXXXCVSVVVTYVLLSVED 858 LV+ +L+RTLR D ++Y R DD LE + +ESGWK V GDVFR P + + +AL+G+GAQL + + +L A+ G LYV RG++ ++ YALTSF+AG VSG +Y R W M LTASLFP L + LN +A YY+++ AIPF T+V + + WA ++ PL + GT++GR+W G R+ +PRP+P ++ P +ALL G+ PF SIFIE YF+F SFW Y+VYYV+ + CV++V TY LL+ E+ Sbjct: 239 LVSMILMRTLRNDYAKYAREEDD--------LETLERDVSEESGWKLVHGDVFRAPRNLVLLSALVGTGAQLAMLMLLVILLAIVGMLYVGRGAIVTTFIVCYALTSFIAGYVSGGFYSRN----DGKHWIKSMLLTASLFPFLCFGIGFLLNFVAIYYHSLAAIPFGTMVVVFVIWAFISFPLALFGTVVGRNWSGQPDNPCRVKTIPRPIPEKKWYLKPSVVALLGGLLPFGSIFIEMYFVFTSFWQYKVYYVYGFMLLVFIILTIVTVCVTIVGTYFLLNAEN 512
BLAST of mRNA_M-pyrifera_M_contig77125.18177.1 vs. uniprot
Match: A0A2G3AU96_CAPCH (Transmembrane 9 superfamily member n=1 Tax=Capsicum chinense TaxID=80379 RepID=A0A2G3AU96_CAPCH) HSP 1 Score: 219 bits (557), Expect = 6.510e-62 Identity = 121/286 (42.31%), Postives = 176/286 (61.54%), Query Frame = 1 Query: 1 LVAFVLIRTLRADVSRYLRAADDDGIDAAAAAAALEAALVDESGWKQVRGDVFRRPMSPEMFAALLGSGAQLTGMGIGTVLAALAGSLYVDRGSVSAAMLILYALTSFLAGIVSGAWYRRQFHPRPAPSWKHVMFLTASLFPILGATVILNLNLLAGYYNTVNAIPFSTVVFILLAWATVNLPLVVAGTLLGRSWCGTRKRLPRINPVPRPVPTHRFLTHPVTLALLAGVAPFCSIFIETYFIFASFWGYRVYYVFELLXXXXXXXXXXXXCVSVVVTYVLLSVED 858 LV+ +L+RTLR D ++Y R +DD ++ LE + +ESGWK V GDVFR P+S + +AL+G+GAQL + + +L A+ G LYV RGS+ ++ YALTSF++G VSGA Y R SW M LTASLFP L + LN +A +Y ++ AIPF T+V + + WA ++ PL + GT++GR+W G R+ +PRP+P ++ P ++L+ G+ PF SIFIE YF+F SFW Y+VYYV+ + CV++V TY LL+ E+ Sbjct: 486 LVSMILMRTLRNDYAKYAR--EDDDLET------LERDVSEESGWKLVHGDVFRTPLSLVLLSALVGTGAQLALLVLLVILLAIVGMLYVGRGSIVTTFIVCYALTSFISGYVSGAMYSRN----GGKSWIKSMILTASLFPFLCFGIGFVLNTIAIFYGSLAAIPFGTIVVVFVIWAFISFPLALLGTVVGRNWSGAPNNPCRVKTIPRPIPVKKWYLTPSVISLMGGLLPFGSIFIEMYFVFTSFWNYKVYYVYGFMLLVFLILIVVTVCVTIVGTYFLLNAEN 759
BLAST of mRNA_M-pyrifera_M_contig77125.18177.1 vs. uniprot
Match: A0A7I8L564_SPIIN (Transmembrane 9 superfamily member n=2 Tax=Spirodela intermedia TaxID=51605 RepID=A0A7I8L564_SPIIN) HSP 1 Score: 214 bits (544), Expect = 9.420e-62 Identity = 121/286 (42.31%), Postives = 172/286 (60.14%), Query Frame = 1 Query: 1 LVAFVLIRTLRADVSRYLRAADDDGIDAAAAAAALEAALVDESGWKQVRGDVFRRPMSPEMFAALLGSGAQLTGMGIGTVLAALAGSLYVDRGSVSAAMLILYALTSFLAGIVSGAWYRRQFHPRPAPSWKHVMFLTASLFPILGATVILNLNLLAGYYNTVNAIPFSTVVFILLAWATVNLPLVVAGTLLGRSWCGTRKRLPRINPVPRPVPTHRFLTHPVTLALLAGVAPFCSIFIETYFIFASFWGYRVYYVFELLXXXXXXXXXXXXCVSVVVTYVLLSVED 858 LV+ +L+RTLR D ++Y R DD ALE + +ESGWK V GDVFR P S + +AL+G+GAQL + + +L A+ G+LYV RG++ ++ YALTSF++G VSG Y R +W M LTASLFP V LN +A +Y T+ AIP T+V +L+ WA ++ PL + GT++GR+W G R+ +PRP+P ++ P ++L+ G+ PF SIFIE YF+F SFW Y+VYYVF + CV++V TY LL+ E+ Sbjct: 224 LVSMILMRTLRKDYAKYAREEDD--------LEALERDVNEESGWKLVHGDVFRPPQSLALLSALVGTGAQLAMLVLLVILLAIIGTLYVGRGAIVTTFIVCYALTSFISGYVSGGLYSRS----SGKNWIRSMILTASLFPFTCFGVGFVLNTIAIFYRTLAAIPLGTMVVVLVIWAFISFPLALLGTVVGRNWNGAPNNPCRVKTIPRPIPDKKWYLTPPVISLMGGLLPFGSIFIEMYFVFTSFWHYKVYYVFGFMLLVFLILVIVTVCVTIVGTYFLLNAEN 497 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig77125.18177.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig77125.18177.1 >prot_M-pyrifera_M_contig77125.18177.1 ID=prot_M-pyrifera_M_contig77125.18177.1|Name=mRNA_M-pyrifera_M_contig77125.18177.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=286bp LVAFVLIRTLRADVSRYLRAADDDGIDAAAAAAALEAALVDESGWKQVRGback to top mRNA from alignment at M-pyrifera_M_contig77125:3..1013+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig77125.18177.1 ID=mRNA_M-pyrifera_M_contig77125.18177.1|Name=mRNA_M-pyrifera_M_contig77125.18177.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=1011bp|location=Sequence derived from alignment at M-pyrifera_M_contig77125:3..1013+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig77125:3..1013+ >mRNA_M-pyrifera_M_contig77125.18177.1 ID=mRNA_M-pyrifera_M_contig77125.18177.1|Name=mRNA_M-pyrifera_M_contig77125.18177.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1716bp|location=Sequence derived from alignment at M-pyrifera_M_contig77125:3..1013+ (Macrocystis pyrifera P11B4 male)back to top |