mRNA_M-pyrifera_M_contig7712.18175.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig7712.18175.1 vs. uniprot
Match: D8LGM5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGM5_ECTSI) HSP 1 Score: 379 bits (974), Expect = 2.540e-129 Identity = 211/284 (74.30%), Postives = 231/284 (81.34%), Query Frame = 1 Query: 13 RLGLPKAPRLDRSGTSAAXXXXXXXXXXAATHGFFASARRGKGGDAASPNVFARVGARGVLAARLLSDVAAAAVASIMVSPFISIVDRAIIQSASGTMGMQASVKQGVRVLATKPALFMARPDFICTFCLYGATYLAANAISTLADEMARSDALPKFLGTTAINMPGSIAKDQALTKLFGVVGGAAKVPAASFALFTVRDVATMAAAFTLPTPMSAKMQEEFGVDSGMADGVSQLVSPGLVQLFSTPTSFVPAIIMRVCRIGVAFGVGGLGNTAIRKNMHAAIA 864 RL +P PRL + A F +AR G G N+ R+GARGVLAARL+SD AAA++AS+MVSPFISIVDRAIIQSASG+MGM+ASV QG RVLATKPALF+ARPDFICTFCLYGATYLAAN IST+ADE +RSD +PKFLGTTAINMPGSIAKDQALTK+FGVVG AAKVPAASFALFTVRDVATMAAAFTLPTPMS KMQ+ FGVDSGMAD SQLVSPGLVQLFSTP SF+PAI MRV RIGVAFGVGGLGNT+IR +H AIA Sbjct: 33 RLHMPPVPRLQGPAVTRTVVAVAAAATGATAARGFLAARDGSAGGVGVGNLLERLGARGVLAARLVSDFAAASMASLMVSPFISIVDRAIIQSASGSMGMKASVAQGFRVLATKPALFLARPDFICTFCLYGATYLAANTISTMADEFSRSDTMPKFLGTTAINMPGSIAKDQALTKIFGVVGSAAKVPAASFALFTVRDVATMAAAFTLPTPMSTKMQD-FGVDSGMADVTSQLVSPGLVQLFSTPDSFMPAIAMRVARIGVAFGVGGLGNTSIRNKLHGAIA 315
BLAST of mRNA_M-pyrifera_M_contig7712.18175.1 vs. uniprot
Match: A0A6H5L555_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L555_9PHAE) HSP 1 Score: 363 bits (932), Expect = 4.640e-123 Identity = 218/308 (70.78%), Postives = 238/308 (77.27%), Query Frame = 1 Query: 22 LPKAPRLDRSG-TSAAXXXXXXXXXXAATHGFFASARRGKGGDAASP--NVFARVGARGVLAARLLSDVAAAAVASIMVSPFISIVDRAIIQSASGTMGMQASVKQGVRVLATKPALFMARPDFICTFCLYGATYLAANAISTLADEMARSDALPKFLGTTAINMPGSIAKDQALTKLFGVVGGAAKVPAASFALFTVRDVATMAAAFTLPTPMSAKMQEEFGVDSGMADGVSQLVSPGLVQLFSTPT------------------------SFVPAIIMRVCRIGVAFGVGGLGNTAIRKNMHAAIA 864 +P PRL+ G T A XXXXX A GF A AR G N+ R+GARGVLAARL+SD AAA++AS+MVSPFISIVDRAIIQSASG+MGM+ASV QG RVLATKPALF+ARPDFICTFCLYGATYLAAN IST+ADE +RSD +PKFLGTTAINMPGSIAKDQALTK+FGVVG AAKVPAASFALFTVRDVATMAAAFTLPTPMSA+MQE FGVDSGMAD SQLVSPGLVQ+FSTP SF+PAI MRV RIGVAFGVGGLGNT+IR +H AIA Sbjct: 1 MPPVPRLEGPGATRTAVAVXXXXXGATAARGFLA-ARDGSXXXXXXXXGNILERLGARGVLAARLVSDFAAASMASLMVSPFISIVDRAIIQSASGSMGMKASVAQGFRVLATKPALFLARPDFICTFCLYGATYLAANTISTMADEYSRSDTMPKFLGTTAINMPGSIAKDQALTKIFGVVGSAAKVPAASFALFTVRDVATMAAAFTLPTPMSARMQESFGVDSGMADVTSQLVSPGLVQVFSTPVHILGLDLYNHPRSSCRARLRVVQDSFMPAIAMRVARIGVAFGVGGLGNTSIRNMLHGAIA 307
BLAST of mRNA_M-pyrifera_M_contig7712.18175.1 vs. uniprot
Match: A0A835Z5G8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5G8_9STRA) HSP 1 Score: 171 bits (434), Expect = 2.490e-48 Identity = 99/243 (40.74%), Postives = 144/243 (59.26%), Query Frame = 1 Query: 214 DVAAAAVASIMVSPFISIVDRAIIQSASGTMGMQASVKQGVRVLATKPALFMARPDFICTFCLYGATYLAANAISTLADEMARSDALPKFLGTTAINMPGSIAKDQALTKLFGVVGGAAKVPAASFALFTVRDVATMAAAFTLPTPMSAKMQEEFGVDSGMADGVSQLVSPGLVQLFSTP------------------------TSFVPAIIMRVCRIGVAFGVGGLGNTAIRKNMHAAIATE 870 DV +A AS MVSPFI+IVDR+IIQ+ASG M M S++ G++ L +P +F+ RP+F+ F +Y ATY ANA++T + A P+FL T+A+NM IAKD+A T++FG A +P +++ALFT+RD T+ A+F LP P+S +Q + G+ AD +Q+ P VQ STP + + ++ R+ RIG AFG+GG+GNTA RK + A A + Sbjct: 40 DVLSAFGASFMVSPFITIVDRSIIQNASGVMQMGDSIRAGIKELVMRPHVFLRRPEFLMIFGVYSATYTTANAVNTTCEHRKVDSAWPRFLSTSAVNMTSCIAKDRAFTRMFGSSAPMA-LPLSTYALFTIRDAGTVGASFNLPGPVSEWLQAQ-GMSKARADFTAQMACPAAVQFLSTPLHLIGLDLYNNPKSTARDRWTFMCSKYTSSVAARIGRIGPAFGIGGVGNTAFRKGLRARFAKD 280
BLAST of mRNA_M-pyrifera_M_contig7712.18175.1 vs. uniprot
Match: A0A5D6XW10_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XW10_9STRA) HSP 1 Score: 168 bits (425), Expect = 3.830e-47 Identity = 103/252 (40.87%), Postives = 143/252 (56.75%), Query Frame = 1 Query: 187 GVLAARLLSDVAAAAVASIMVSPFISIVDRAIIQSASGTMGMQASVKQGVRVLATKPALFMARPDFICTFCLYGATYLAANAISTLADEMARSDALPKFLGTTAINMPGSIAKDQALTKLFGVVGGAAKVPAASFALFTVRDVATMAAAFTLPTPMSAKMQEEFGVDSGMADGVSQLVSPGLVQLFSTPT------------------------SFVPAIIMRVCRIGVAFGVGGLGNTAIRKNMHAAIATE 870 G+L RL +DV AAA AS V+PFI+IVDRAII++ASG + +++ R A +P F+ +F F LY ATY +ANA +L D R +PKF TTA+NM IAKD+A ++FGVV +A P A+ LF VRD T+AA+F P ++ K+Q++ GVD A +QL+ P LVQ STP ++ + I R+ RIG AFG+GG+GN R+ + AA+ E Sbjct: 18 GLLTRRLAADVTAAATASFAVAPFITIVDRAIIENASGARPLGVGIRELARAFARRPLAFVRTREFAIVFGLYTATYASANATDSLCDFAERDSQMPKFAATTAVNMSLCIAKDRAFAQMFGVVAPSA-FPLAAVGLFAVRDSLTVAASFNAPKAVARKLQDDTGVDPARARTAAQLLCPALVQFVSTPLHLLGLDLYNHKGAGAAAHLRVVRREYLKSAIARIGRIGPAFGIGGIGNAHCRETLRAALDAE 268
BLAST of mRNA_M-pyrifera_M_contig7712.18175.1 vs. uniprot
Match: A0A8K1CT18_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CT18_PYTOL) HSP 1 Score: 165 bits (418), Expect = 3.690e-46 Identity = 104/245 (42.45%), Postives = 141/245 (57.55%), Query Frame = 1 Query: 202 RLLSDVAAAAVASIMVSPFISIVDRAIIQSASGTMGMQASVKQGVRVLATKPALFMARPDFICTFCLYGATYLAANAISTLADEMARSDALPKFLGTTAINMPGSIAKDQALTKLFGVVGGAAKVPAASFALFTVRDVATMAAAFTLPTPMSAKMQEEFGVDSGMADGVSQLVSPGLVQLFSTPT------------------------SFVPAIIMRVCRIGVAFGVGGLGNTAIRKNMHAAIA 864 RL DVAAAA AS+ VSPFI+IVDRAII++ASG + VKQ P F+ R +F F LY ATY +AN+I TL D + +PKF+GTTA+NM IAKD+A T++FGV+ AA P AS LF +RD T+AA+F P M+ ++QE+ V + +SQLV P VQ STP ++ ++ R+ RIG AFG+GG+GNT R+ + A++ Sbjct: 19 RLGVDVAAAATASLGVSPFIAIVDRAIIENASGARRLSDGVKQLSMEFLRHPLRFLHRREFRLVFGLYTATYASANSIETLCDATDTDNQMPKFVGTTAVNMTLCIAKDRAFTQMFGVIAPAA-FPLASVGLFAIRDSMTVAASFNAPKIMAQQLQEKAHVKPSTSATISQLVCPAAVQFVSTPLHLVGLDLYNHKGASMSQRLVFVQREYIKSVFARIARIGPAFGIGGVGNTYCRQRLRTALS 262
BLAST of mRNA_M-pyrifera_M_contig7712.18175.1 vs. uniprot
Match: A0A662XCZ4_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XCZ4_9STRA) HSP 1 Score: 160 bits (406), Expect = 2.210e-44 Identity = 103/255 (40.39%), Postives = 146/255 (57.25%), Query Frame = 1 Query: 178 GARGV--LAARLLSDVAAAAVASIMVSPFISIVDRAIIQSASGTMGMQASVKQGVRVLATKPALFMARPDFICTFCLYGATYLAANAISTLADEMARSDALPKFLGTTAINMPGSIAKDQALTKLFGVVGGAAKVPAASFALFTVRDVATMAAAFTLPTPMSAKMQEEFGVDSGMADGVSQLVSPGLVQLFSTP-------------------TSFVP-----AIIMRVCRIGVAFGVGGLGNTAIRKNMHAAIA 864 G+RG LA RL D+AAA AS+ V+PFI+IVDRAII++ASG + +KQ P F+ + +F+ F LY ATY++ANAI T+ + + + +PKF+GTTA+NM IAKD+A ++FGV+ AA P AS LF VRD T+AA+F P ++ K++++ + A ++QLV P VQ STP SFV ++ R+ RIG AFG+GG+GNT R + A Sbjct: 9 GSRGASALAKRLGIDLAAAMAASVSVAPFITIVDRAIIENASGARPLGVGLKQLAADFVRHPLRFVVKREFLLIFGLYSATYVSANAIDTMCEFAEKDNQMPKFIGTTAVNMSLCIAKDRAFARMFGVIAPAA-FPLASIGLFAVRDSLTVAASFNAPKFLAKKLEDDAKMQPSRAGTIAQLVCPAAVQFISTPLHLLGLDLYNNKGLSAAKRASFVQREYLKSVFARIGRIGPAFGIGGVGNTYFRDQLRTTFA 262
BLAST of mRNA_M-pyrifera_M_contig7712.18175.1 vs. uniprot
Match: K3WSU5_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WSU5_GLOUD) HSP 1 Score: 159 bits (401), Expect = 1.260e-43 Identity = 96/246 (39.02%), Postives = 141/246 (57.32%), Query Frame = 1 Query: 190 VLAARLLSDVAAAAVASIMVSPFISIVDRAIIQSASGTMGMQASVKQGVRVLATKPALFMARPDFICTFCLYGATYLAANAISTLADEMARSDALPKFLGTTAINMPGSIAKDQALTKLFGVVGGAAKVPAASFALFTVRDVATMAAAFTLPTPMSAKMQEEFGVDSGMADGVSQLVSPGLVQLFSTPT------------------------SFVPAIIMRVCRIGVAFGVGGLGNTAIRKNMHA 855 V+A L D+AAAA AS VSPFI+IVDRAII++ASG + +K+ + P F+ + +FI F LY +TY +ANAI T+ + + +PKFLGTTA+NM IAKD+A ++FGVV +A P + LF +RD T+ A+F P ++ K++ + GV+ A ++QL+ P VQ STP ++ + + R+ RIG AFG+GG+GNT R+N+ A Sbjct: 16 VVAKNLAIDLAAAAAASFAVSPFITIVDRAIIENASGARPLAVGIKELSKAFVANPFQFVRKREFIIVFGLYTSTYASANAIDTVCEWAEADNQMPKFLGTTAVNMTLCIAKDRAFAQMFGVVAPSA-FPIGAIGLFAIRDSLTVGASFNAPKTVAKKLEVDGGVEPSRAKTLAQLLCPAAVQFVSTPLHLLGLDLYNNKGASVAARFRFVQREYLKSAVARIGRIGPAFGIGGVGNTYCRENLRA 260
BLAST of mRNA_M-pyrifera_M_contig7712.18175.1 vs. uniprot
Match: A0A2D4BK36_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BK36_PYTIN) HSP 1 Score: 158 bits (400), Expect = 1.830e-43 Identity = 102/249 (40.96%), Postives = 145/249 (58.23%), Query Frame = 1 Query: 190 VLAARLLS-DVAAAAVASIMVSPFISIVDRAIIQSASGTMGMQASVKQGVRVLATKPALFMARPDFICTFCLYGATYLAANAISTLADEMARSDALPKFLGTTAINMPGSIAKDQALTKLFGVVGGAAKVPAASFALFTVRDVATMAAAFTLPTPMSAKMQEEFGVDSGMADGVSQLVSPGLVQLFSTPT------------------------SFVPAIIMRVCRIGVAFGVGGLGNTAIRKNMHAAI 861 VLAA+ L D AAA +AS+ VSPFI+IVDR+II++ASG + +K+ P F+ R +F F LY ATY +ANAI TL D + +PKF+GTTA+NM IAKD+A T++FGV+ AA P AS LF VRD T+AA+F P ++ +++E ++ A V+QL+ P +VQ STP ++ + + R+ RIG AFGVGG+GNT R+ + A++ Sbjct: 15 VLAAKRLGVDAAAAMIASLGVSPFITIVDRSIIENASGARQLTTGLKELSIDFLRHPLQFLRRREFRLVFGLYTATYASANAIDTLCDVTDTNSQMPKFVGTTAVNMTLCIAKDRAFTQMFGVIAPAA-FPLASIGLFAVRDALTVAASFNAPRVVAKELRERAQLEPSRASTVAQLLCPAVVQFVSTPLHLLGLDLYNHRTAMVRQRINFVQREYLKSAVARIGRIGPAFGVGGVGNTFCRERLRASL 262
BLAST of mRNA_M-pyrifera_M_contig7712.18175.1 vs. uniprot
Match: A0A3M6VQY3_9STRA (Uncharacterized protein n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VQY3_9STRA) HSP 1 Score: 150 bits (379), Expect = 2.360e-40 Identity = 95/247 (38.46%), Postives = 137/247 (55.47%), Query Frame = 1 Query: 193 LAARLLSDVAAAAVASIMVSPFISIVDRAIIQSASGTMGMQASVKQGVRVLATKPALFMARPDFICTFCLYGATYLAANAISTLADEMARSDALPKFLGTTAINMPGSIAKDQALTKLFGVVGGAAKVPAASFALFTVRDVATMAAAFTLPTPMSAKMQEEFGVDSGMADGVSQLVSPGLVQLFSTPT------------------------SFVPAIIMRVCRIGVAFGVGGLGNTAIRKNMHAAI 861 L +L+ D AAA AS+ V+PFI+IVDRAII++ASG + +K+ P F+ + +F F LY ATY+AANA+ ++ + + + +PKF+GTTA+NM IAKD+A ++FGV+ AA P AS LF VRD T AA+F P ++ K+++ +D A +QL+ P VQ STP +V +++ RV RIG AFGVGG+GN R A + Sbjct: 17 LVKQLMVDTAAAMAASLGVAPFITIVDRAIIENASGARPLGRGIKELSISFLKNPLRFVGKREFHIVFGLYTATYMAANAVDSVCEYIETDNQMPKFIGTTAVNMSLCIAKDRAFARMFGVIAPAA-FPLASIGLFAVRDSMTCAASFNAPKVLAKKIEDNKLMDKSNAGTFAQLICPAAVQFISTPLHLLGLDLYNNKGHTMTQHASLVRREYVKSVLARVGRIGPAFGVGGVGNAYFRNIFRAKL 262
BLAST of mRNA_M-pyrifera_M_contig7712.18175.1 vs. uniprot
Match: A0A2D4BMX9_PYTIN (NUP50 domain-containing protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BMX9_PYTIN) HSP 1 Score: 157 bits (396), Expect = 1.650e-39 Identity = 100/246 (40.65%), Postives = 141/246 (57.32%), Query Frame = 1 Query: 196 AARLLSDVAAAAVASIMVSPFISIVDRAIIQSASGTMGMQASVKQGVRVLATKPALFMARPDFICTFCLYGATYLAANAISTLADEMARSDALPKFLGTTAINMPGSIAKDQALTKLFGVVGGAAKVPAASFALFTVRDVATMAAAFTLPTPMSAKMQEEFGVDSGMADGVSQLVSPGLVQLFSTPT------------------------SFVPAIIMRVCRIGVAFGVGGLGNTAIRKNMHAAI 861 A RL D AAA +AS+ VSPFI+IVDR+II++ASG + +K+ P F+ R +F F LY ATY ANAI TL D + +PKF+GTTA+NM IAKD+A T++FGV+ AA P AS LF VRD T+AA+F P ++ +++E ++ A V+QL+ P +VQ STP ++ + + R+ RIG AFGVGG+GNT R+ + A++ Sbjct: 568 AKRLGVDAAAAMIASLGVSPFITIVDRSIIENASGARQLTTGLKELSIDFLRHPLQFLRRREFRLVFGLYTATYARANAIDTLCDVTDTNSQMPKFVGTTAVNMTLCIAKDRAFTQMFGVIAPAA-FPLASIGLFAVRDALTVAASFNAPRVVAKELRERAQLEPSRASTVAQLLCPAVVQFVSTPLHLLGLDLYNHRTAMVRQRINFVQREYLKSAVARIGRIGPAFGVGGVGNTFCRERLRASL 812 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig7712.18175.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig7712.18175.1 >prot_M-pyrifera_M_contig7712.18175.1 ID=prot_M-pyrifera_M_contig7712.18175.1|Name=mRNA_M-pyrifera_M_contig7712.18175.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=296bp ASKSRLGLPKAPRLDRSGTSAATAAVAAAATSAATHGFFASARRGKGGDAback to top mRNA from alignment at M-pyrifera_M_contig7712:1555..4545+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig7712.18175.1 ID=mRNA_M-pyrifera_M_contig7712.18175.1|Name=mRNA_M-pyrifera_M_contig7712.18175.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=2991bp|location=Sequence derived from alignment at M-pyrifera_M_contig7712:1555..4545+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig7712:1555..4545+ >mRNA_M-pyrifera_M_contig7712.18175.1 ID=mRNA_M-pyrifera_M_contig7712.18175.1|Name=mRNA_M-pyrifera_M_contig7712.18175.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1776bp|location=Sequence derived from alignment at M-pyrifera_M_contig7712:1555..4545+ (Macrocystis pyrifera P11B4 male)back to top |