mRNA_M-pyrifera_M_contig77118.18174.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig77118.18174.1 vs. uniprot
Match: A0A7S1CI45_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CI45_9STRA) HSP 1 Score: 211 bits (538), Expect = 5.310e-60 Identity = 111/219 (50.68%), Postives = 148/219 (67.58%), Query Frame = 1 Query: 1 LYPVDAKDGVVYCLDRSSRVVSVSFDPTEYLFKAALAAGEYARVVMLIRSGNMCGQALIAYLRRAGFPEVAMQFVEDPDTKLALALECGDLETARACATRLGTPAAWQSLATEALHQGDTGVVEVAYQQIRDLDRLSFLYLTLGRREYLDKMLAIAKRRKDGPAQFQTALFLGDAAERVAVLESTGQLALAFVCASTFGLEEDADRIRGLLEEAELPVP 657 +Y + A+ ++ LDR +V +++ +PTEY+FK A+ GE+ + ++RSG +CGQA+IAYL++AGFPEVA++FV+D T+ LALECG LE A A L T W L EAL QG+ VVE AYQQ + +RLSFLYL G E L KML I+K R+D A+F AL+LGD ERV +LES GQ+ LA+V A T GL E A+R+ LE ELP+P Sbjct: 578 VYALWARGTTLHVLDREGKVRALTVEPTEYIFKMAVNKGEHRTALRMVRSGRLCGQAVIAYLQKAGFPEVALEFVKDQQTRFNLALECGALEVALEAANELNTDDCWHRLGVEALRQGNHQVVERAYQQTHNFERLSFLYLITGNTEKLRKMLKISKLREDVMARFHNALYLGDVGERVELLESVGQIGLAYVAAKTHGLTEAAERLAASLEAHELPIP 796
BLAST of mRNA_M-pyrifera_M_contig77118.18174.1 vs. uniprot
Match: A0A6H5KXQ0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXQ0_9PHAE) HSP 1 Score: 209 bits (533), Expect = 3.280e-59 Identity = 114/226 (50.44%), Postives = 150/226 (66.37%), Query Frame = 1 Query: 1 LYPVDAKDGVVYCLDRSSRVVSVSFDPTEYLFKAALAAGEYARVVMLIRSGNMCGQALIAYLRRAGFPEVAMQFVEDPDTKLALALECGDLETARACATRLGTPAAWQSLATEALHQGDTGVVEVAYQQIRDLDRLSFLYLTLGRREYLDKMLAIAKRRKDGPAQFQTALFLGDAAERVAVLESTGQLALAFVCASTFGLEEDADRIRGLLEEAELPVPDMESIAA 678 LY A ++CLDR + V D TE LFK AL +Y V+ ++R +CGQ++I+YL+ GFPEVA+ FV D TK LAL CG++E A A +L A W L TEAL QG+ VVE+AYQ+ ++ +RLSFLYL G + L KML IA+RR D ++F +LFLGDAAERV+VLESTGQ++LA++ A+T GLEEDA R+R LLE +P+P AA Sbjct: 226 LYLTKAVGKKLFCLDREGKTRVVEIDNTEALFKLALEDKKYGEVMHMVRHSRLCGQSIISYLQEKGFPEVALHFVSDNKTKFRLALACGNIEVAMHTADKLPDDAIWHQLGTEALRQGNHQVVEMAYQRTKNFERLSFLYLLTGNTDKLRKMLKIAERRGDVMSRFHNSLFLGDAAERVSVLESTGQISLAYLTAATHGLEEDAARLRELLEAQGMPIPQTRPDAA 451
BLAST of mRNA_M-pyrifera_M_contig77118.18174.1 vs. uniprot
Match: A0A7S3UV91_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UV91_HETAK) HSP 1 Score: 208 bits (529), Expect = 4.040e-59 Identity = 114/219 (52.05%), Postives = 146/219 (66.67%), Query Frame = 1 Query: 1 LYPVDAKDGVVYCLDRSSRVVSVSFDPTEYLFKAALAAGEYARVVMLIRSGNMCGQALIAYLRRAGFPEVAMQFVEDPDTKLALALECGDLETARACATRLGTPAAWQSLATEALHQGDTGVVEVAYQQIRDLDRLSFLYLTLGRREYLDKMLAIAKRRKDGPAQFQTALFLGDAAERVAVLESTGQLALAFVCASTFGLEEDADRIRGLLEEAELPVP 657 LY A CLDR + ++ D TE LFK AL A +Y V+ L+R +CG+A++ YL+ G+PEVA+ FV D + LAL+CGD+E+A A A L AW+ L EAL QG VVE+AYQ+ RDL+RLSFLYL GR E L KM IA+++ D ++F AL+LGDA ERVAVLE+ GQ ALA++ AST GL+EDADR+R LLE A PVP Sbjct: 466 LYICQASHLQALCLDREGKTRALELDCTEALFKLALEAKQYGEVMRLVRHSRLCGRAVVGYLQDKGYPEVALHFVRDTAQRFDLALKCGDIESAIATAYELNADDAWRRLGREALRQGKLEVVEMAYQRCRDLERLSFLYLVAGRTEKLRKMQLIAQKKGDLMSRFHNALYLGDAQERVAVLEAAGQTALAYLTASTHGLQEDADRLRQLLEAAGQPVP 684
BLAST of mRNA_M-pyrifera_M_contig77118.18174.1 vs. uniprot
Match: D8LL95_ECTSI (Coatomer subunit alpha n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LL95_ECTSI) HSP 1 Score: 209 bits (532), Expect = 1.420e-58 Identity = 112/219 (51.14%), Postives = 148/219 (67.58%), Query Frame = 1 Query: 1 LYPVDAKDGVVYCLDRSSRVVSVSFDPTEYLFKAALAAGEYARVVMLIRSGNMCGQALIAYLRRAGFPEVAMQFVEDPDTKLALALECGDLETARACATRLGTPAAWQSLATEALHQGDTGVVEVAYQQIRDLDRLSFLYLTLGRREYLDKMLAIAKRRKDGPAQFQTALFLGDAAERVAVLESTGQLALAFVCASTFGLEEDADRIRGLLEEAELPVP 657 LY A ++CLDR + V D TE LFK AL +Y V+ ++R +CGQ++I+YL+ GFPEVA+ FV D TK LAL CG++E A A +L A W L TEAL QG+ VVE+AYQ+ ++ +RLSFLYL G + L KML IA+RR D ++F +LFLGDAAERV+VLESTGQ++LA++ A+T GLEEDA R+R LLE +P+P Sbjct: 585 LYLTKAVGKKLFCLDREGKTRVVEIDNTEALFKLALEDKKYGEVMHMVRHSRLCGQSIISYLQEKGFPEVALHFVSDNKTKFRLALACGNIEVAMHTADKLPDDAIWHQLGTEALRQGNHQVVEMAYQRTKNFERLSFLYLLTGNTDKLRKMLKIAERRGDVMSRFHNSLFLGDAAERVSVLESTGQISLAYLTAATHGLEEDAARLRELLEAQGMPIP 803
BLAST of mRNA_M-pyrifera_M_contig77118.18174.1 vs. uniprot
Match: A0A2R5GVU4_9STRA (Coatomer subunit alpha-1 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GVU4_9STRA) HSP 1 Score: 209 bits (532), Expect = 1.490e-58 Identity = 110/226 (48.67%), Postives = 147/226 (65.04%), Query Frame = 1 Query: 1 LYPVDAKDGVVYCLDRSSRVVSVSFDPTEYLFKAALAAGEYARVVMLIRSGNMCGQALIAYLRRAGFPEVAMQFVEDPDTKLALALECGDLETARACATRLGTPAAWQSLATEALHQGDTGVVEVAYQQIRDLDRLSFLYLTLGRREYLDKMLAIAKRRKDGPAQFQTALFLGDAAERVAVLESTGQLALAFVCASTFGLEEDADRIRGLLEEAELPVPDMESIAA 678 +Y +YCLDR +V +S D TE LFK AL +Y V+ +IR N+CGQA+IAYL+ G+PEVA+ FVED T+ LA+ECG+LE A A + W L EAL QG+ +VE+AYQ+ +D +RLSFLYL G + L KML IA+ R D ++F AL+LGDAAERV +LE GQL+LA+V A + GL EDA+RI G L EA + +P ++ +A Sbjct: 594 IYITRVTKDTLYCLDRECKVRKLSIDTTECLFKIALMRKQYGEVIRMIRHANLCGQAIIAYLQAKGYPEVALHFVEDKKTRFNLAIECGNLEVAMTAALEVDDTECWTRLGVEALRQGNQKIVEMAYQRTKDFERLSFLYLITGNTDKLRKMLKIAEMRGDVMSRFHNALYLGDAAERVKILEEVGQLSLAYVAAVSHGLNEDAERIAGALSEAGVELPQVDPSSA 819
BLAST of mRNA_M-pyrifera_M_contig77118.18174.1 vs. uniprot
Match: A0A6T5YPA4_9CHLO (Coatomer subunit alpha n=1 Tax=Ostreococcus mediterraneus TaxID=1486918 RepID=A0A6T5YPA4_9CHLO) HSP 1 Score: 206 bits (524), Expect = 1.660e-57 Identity = 105/215 (48.84%), Postives = 144/215 (66.98%), Query Frame = 1 Query: 28 VVYCLDRSSRVVSVSFDPTEYLFKAALAAGEYARVVMLIRSGNMCGQALIAYLRRAGFPEVAMQFVEDPDTKLALALECGDLETARACATRLGTPAAWQSLATEALHQGDTGVVEVAYQQIRDLDRLSFLYLTLGRREYLDKMLAIAKRRKDGPAQFQTALFLGDAAERVAVLESTGQLALAFVCASTFGLEEDADRIRGLLEEAELPVPDMESI 672 VVYCLDR R + FDP+EY+FK AL A + +V+ +I+SG +CGQ++IAYL++ G+PE+A+ FV+D T+ LALECG++E A A A + W L EAL QG+ +VE AYQ+ ++ +RLSFLYL G E L KML I++ R D QF AL+LG+ AERV VLE G LA++ A T GLEEDA RI +L EA +P+++ + Sbjct: 577 VVYCLDRDGRSRQIQFDPSEYMFKLALNAKRFDQVLAMIKSGQLCGQSIIAYLQQKGYPEIALHFVQDERTRFELALECGNIEVALASAQEMDEKDTWHKLGVEALRQGNHQIVEFAYQKTKNFERLSFLYLITGNVEKLSKMLKISEMRSDVMGQFHNALYLGNVAERVKVLEQVGHYPLAYLTAKTHGLEEDATRIAEMLTEAGAAIPEVDGL 791
BLAST of mRNA_M-pyrifera_M_contig77118.18174.1 vs. uniprot
Match: A0A7S2G5I5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2G5I5_9STRA) HSP 1 Score: 194 bits (493), Expect = 2.110e-57 Identity = 106/219 (48.40%), Postives = 140/219 (63.93%), Query Frame = 1 Query: 31 VYCLDRSSRVVSVSFDPTEYLFKAALAAGEYARVVMLIRSGNMCGQALIAYLRRAGFPEVAMQFVEDPDTKLALALECGDLETARACATRLGTPAA--------WQSLATEALHQGDTGVVEVAYQQIRDLDRLSFLYLTLGRREYLDKMLAIAKRRKDGPAQFQTALFLGDAAERVAVLESTGQLALAFVCASTFGLEEDADRIRGLLEEAELPVPDM 663 +YCLDR + + + TE LFK AL +Y V+ ++ +CGQA+IAYL++ GFPEVA+ FV DP T+ LAL CG++E A +LG + WQ L EAL QG+ VVE A Q +D DRLSFLYL G R+ L KML IA+ R+D ++F L+LGD ERVA+LES GQ LA++ A T GLEE+A+RI+ LLE A L VP++ Sbjct: 20 LYCLDRECKTRKMKIESTEALFKMALDNKQYGDVMRMVHHSRLCGQAIIAYLQQKGFPEVALHFVRDPKTRFRLALACGNIEVAMETVDKLGEDESMHQLAMDCWQQLGIEALRQGNHQVVEKAAQMTKDFDRLSFLYLITGNRKKLGKMLKIAEIRQDVMSRFHNTLYLGDVKERVAILESAGQTYLAYLTAITHGLEEEAERIKALLEAANLDVPEV 238
BLAST of mRNA_M-pyrifera_M_contig77118.18174.1 vs. uniprot
Match: UPI0006B0E6B7 (coatomer subunit alpha-like n=1 Tax=Limulus polyphemus TaxID=6850 RepID=UPI0006B0E6B7) HSP 1 Score: 204 bits (520), Expect = 5.730e-57 Identity = 108/229 (47.16%), Postives = 151/229 (65.94%), Query Frame = 1 Query: 1 LYPVDAKDGVVYCLDRSSRVVSVSFDPTEYLFKAALAAGEYARVVMLIRSGNMCGQALIAYLRRAGFPEVAMQFVEDPDTKLALALECGDLETARACATRLGTPAAWQSLATEALHQGDTGVVEVAYQQIRDLDRLSFLYLTLGRREYLDKMLAIAKRRKDGPAQFQTALFLGDAAERVAVLESTGQLALAFVCASTFGLEEDADRIRGLL--EEAELPVPDMESIAAQ 681 +Y +D VYCLDR R + DPTEY FK AL +Y V+ ++R+ + GQ++IAYL++ G+PEVA+ FV+D T+ ALALECG++E A A L A W+ L AL QG+ VVE+AYQ+ ++ D+LSFLYL G E L KM+ IA+ RKD QFQ ALFLGD AERV +L++ GQL+LA++CA T G+ E+A+ ++ E +LP PD +++ Q Sbjct: 570 IYITRVRDTNVYCLDRECRPRVLGIDPTEYRFKLALVNRKYDEVLHMVRNAKLVGQSIIAYLQKKGYPEVALHFVKDEKTRFALALECGNIEVALEAARTLDDKACWEKLGEAALFQGNHQVVEMAYQRTKNFDKLSFLYLITGNLEKLRKMMKIAEIRKDTSGQFQNALFLGDVAERVKILKNCGQLSLAYLCAVTHGMHEEANNLKDSFKSENVKLPEPDPDAVLLQ 798
BLAST of mRNA_M-pyrifera_M_contig77118.18174.1 vs. uniprot
Match: A0A7S3DZE6_9CHLO (Hypothetical protein n=1 Tax=Chloropicon laureae TaxID=464258 RepID=A0A7S3DZE6_9CHLO) HSP 1 Score: 200 bits (508), Expect = 3.420e-56 Identity = 100/215 (46.51%), Postives = 141/215 (65.58%), Query Frame = 1 Query: 31 VYCLDRSSRVVSVSFDPTEYLFKAALAAGEYARVVMLIRSGNMCGQALIAYLRRAGFPEVAMQFVEDPDTKLALALECGDLETARACATRLGTPAAWQSLATEALHQGDTGVVEVAYQQIRDLDRLSFLYLTLGRREYLDKMLAIAKRRKDGPAQFQTALFLGDAAERVAVLESTGQLALAFVCASTFGLEEDADRIRGLLEEAELPVPDMESIA 675 +YCLDR + + D TEY+FK AL +Y +V+ ++RS +CGQA+I+YL++ GFPE+A+ FV++ TK LA+ECG++E A A L W L EAL QG+ +VE AYQ+ ++ +RLSFLYL G E L KM+ IA+ R D QF +L+LGD +ERV VL GQL LA++ A + GLEE+A + LLEE LP+P+++ A Sbjct: 90 IYCLDRDGKTRQIQIDSTEYIFKLALLQKKYDQVIEMVRSSQLCGQAIISYLQKKGFPEIALHFVDNEQTKFNLAIECGNIEVALQSAQALDDKDTWHHLGVEALRQGNFEIVEFAYQKCKNFERLSFLYLITGHTEKLQKMVKIAEMRNDVMGQFHNSLYLGDVSERVKVLHEVGQLPLAYITAKSHGLEEEAAELVALLEEQGLPIPEVKGKA 304
BLAST of mRNA_M-pyrifera_M_contig77118.18174.1 vs. uniprot
Match: A0A087UGF1_STEMI (Coatomer subunit alpha (Fragment) n=3 Tax=Entelegynae TaxID=74971 RepID=A0A087UGF1_STEMI) HSP 1 Score: 202 bits (514), Expect = 3.570e-56 Identity = 107/229 (46.72%), Postives = 151/229 (65.94%), Query Frame = 1 Query: 1 LYPVDAKDGVVYCLDRSSRVVSVSFDPTEYLFKAALAAGEYARVVMLIRSGNMCGQALIAYLRRAGFPEVAMQFVEDPDTKLALALECGDLETARACATRLGTPAAWQSLATEALHQGDTGVVEVAYQQIRDLDRLSFLYLTLGRREYLDKMLAIAKRRKDGPAQFQTALFLGDAAERVAVLESTGQLALAFVCASTFGLEEDADRIRGLLE--EAELPVPDMESIAAQ 681 +Y K+ VYCLDR R ++ DPTEY FK AL +Y V+ ++R+ + GQ++IAYL++ G+PEVA+ FV+D T+ ALALECG++E A A L A W+ L AL G+ VVE+AYQ+ ++ D+LSFLYL G E L KM+ IA+ RKD QFQ AL+LGD AERV +L++ GQ ++A++CA T GLEE+A+ ++ LE + LP PD ++ Q Sbjct: 570 IYITCVKESNVYCLDRECRPRVLTIDPTEYRFKLALVNRKYEEVLHMVRNAKLVGQSIIAYLQKKGYPEVALHFVKDEKTRFALALECGNIEVALDAARILDDKACWEKLGEAALLHGNHQVVEMAYQRTKNFDKLSFLYLITGNLEKLKKMMKIAEIRKDTSGQFQNALYLGDVAERVKILKTCGQTSVAYLCAVTHGLEEEAENLKASLEGSDVSLPQPDPSAVLLQ 798 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig77118.18174.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig77118.18174.1 >prot_M-pyrifera_M_contig77118.18174.1 ID=prot_M-pyrifera_M_contig77118.18174.1|Name=mRNA_M-pyrifera_M_contig77118.18174.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=227bp LYPVDAKDGVVYCLDRSSRVVSVSFDPTEYLFKAALAAGEYARVVMLIRSback to top mRNA from alignment at M-pyrifera_M_contig77118:5..685+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig77118.18174.1 ID=mRNA_M-pyrifera_M_contig77118.18174.1|Name=mRNA_M-pyrifera_M_contig77118.18174.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=681bp|location=Sequence derived from alignment at M-pyrifera_M_contig77118:5..685+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig77118:5..685+ >mRNA_M-pyrifera_M_contig77118.18174.1 ID=mRNA_M-pyrifera_M_contig77118.18174.1|Name=mRNA_M-pyrifera_M_contig77118.18174.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1362bp|location=Sequence derived from alignment at M-pyrifera_M_contig77118:5..685+ (Macrocystis pyrifera P11B4 male)back to top |