mRNA_M-pyrifera_M_contig77116.18172.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig77116.18172.1 vs. uniprot
Match: D8LRP2_ECTSI (Structural maintenance of chromosomes protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRP2_ECTSI) HSP 1 Score: 129 bits (324), Expect = 5.360e-30 Identity = 84/234 (35.90%), Postives = 145/234 (61.97%), Query Frame = 1 Query: 1 AYVSMSYEVGFGDDLEGFSAGDTISLRREILGSGGSRYRLNGRAVGFGEYEGVLAGMGCLVKARNFLVFQGDVDAIARKSPVELMAHLEQVAGSADLKEEYGRVRKELEEANEAALFSQQRVRGLQSEVAQLGEQGEESDKFQALVAEEKRLREQATLFRVWHLVRGLERGEDEVRVVEQERGRQEAEEKEAGKKAVRLVEEHRKARRELGKVQSKAKSARAAVQKRKKTEGEM 702 A V + Y VG G+++ G AGD + R I G S YRLN + V + YE L +G LVKARNFLVFQGDV++IA KSP EL EQ++GS + K EY ++ E+A E +FS +R +G Q+E Q+ EQ EE+++FQ + E + L+ ++ L +++H+ + ++ E++++++ R+E EE + +KA ++ + +K +E+ ++ + + A+A + ++K+ +M Sbjct: 78 AMVKVVYMVGEGEEVGGQEAGDEVHFSRVISAGGASSYRLNDKEVTWESYEKRLRSIGVLVKARNFLVFQGDVESIASKSPKELTQLFEQISGSDESKAEYEELKAAKEKAEEDTIFSFKRKKGCQAERKQVKEQKEEAERFQKKLKEMEDLKIESFLVQLFHINKDVDEREEDIKLM-----REELEEAQEREKAADVILKSKK--KEMARLNRELQKAQAELNQQKRLRDDM 304
BLAST of mRNA_M-pyrifera_M_contig77116.18172.1 vs. uniprot
Match: A0A4D9CMM9_9STRA (Structural maintenance of chromosomes protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CMM9_9STRA) HSP 1 Score: 119 bits (299), Expect = 1.100e-26 Identity = 70/181 (38.67%), Postives = 112/181 (61.88%), Query Frame = 1 Query: 1 AYVSMSYEVGFGDDLEGFSAGDTISLRREILGSGGSRYRLNGRAVGFGEYEGVLAGMGCLVKARNFLVFQGDVDAIARKSPVELMAHLEQVAGSADLKEEYGRVRKELEEANEAALFSQQRVRGLQSEVAQLGEQGEESDKFQALVAEEKRLREQATLFRVWHLVRGLERGEDEVRVVEQE 543 A+V + Y++ + + G+ G ++S +R I +G YR+N + V YE L +G LVKARNFLVFQGDV++IA+K+P +L A EQ++GS DLK Y R+ EEA+E +F+ Q+ + +E Q+ EQ EE++++ +E L +A L R++H+ R L++ E ++ VV E Sbjct: 79 AFVELIYQMDEDETVPGYETGASLSFKRTISPTGVGSYRINEKEVTGEAYESTLKSIGVLVKARNFLVFQGDVESIAQKAPKDLTALFEQISGSEDLKASYEEARRAKEEADENVIFAYQKKKSQAAERKQVKEQKEEAERYATKKSELSALTTEAYLHRLYHVKRELDQNEAKLSVVRSE 259
BLAST of mRNA_M-pyrifera_M_contig77116.18172.1 vs. uniprot
Match: UPI001FB1729A (structural maintenance of chromosomes protein 1 n=1 Tax=Impatiens glandulifera TaxID=253017 RepID=UPI001FB1729A) HSP 1 Score: 115 bits (288), Expect = 3.120e-25 Identity = 66/175 (37.71%), Postives = 109/175 (62.29%), Query Frame = 1 Query: 1 AYVSMSYEVGFGDDLEGFSAGDTISLRREILGSGGSRYRLNGRAVGFGEYEGVLAGMGCLVKARNFLVFQGDVDAIARKSPVELMAHLEQVAGSADLKEEYGRVRKELEEANEAALFSQQRVRGLQSEVAQLGEQGEESDKFQALVAEEKRLREQATLFRVWHLVRGLERGEDEV 525 A+V + Y +G G +++ R I +GGS YR++GR V + +Y G L +G LVKARNFLVFQGDV++IA K+P EL A +EQ++GS DLK+EY ++ ++ A E A + Q+ R + SE Q EQ EE++K + K ++++ L+++W+ + +E+ +++ Sbjct: 86 AFVKLVYLLGSGTEIQ---------FTRTITPAGGSEYRIDGRVVNWDDYNGKLKSLGILVKARNFLVFQGDVESIASKNPKELAALIEQISGSEDLKDEYEKLEEQKARAEEKAALAYQKKRTVVSERKQKKEQKEEAEKHLQFQTQLKSVKKEHFLWQLWNFEKDIEKANEDL 251
BLAST of mRNA_M-pyrifera_M_contig77116.18172.1 vs. uniprot
Match: A0A0K1NZJ5_ACTAR (Structural maintenance of chromosomes protein 1 (Fragment) n=1 Tax=Actinidia arguta TaxID=64478 RepID=A0A0K1NZJ5_ACTAR) HSP 1 Score: 114 bits (284), Expect = 9.290e-25 Identity = 68/175 (38.86%), Postives = 107/175 (61.14%), Query Frame = 1 Query: 1 AYVSMSYEVGFGDDLEGFSAGDTISLRREILGSGGSRYRLNGRAVGFGEYEGVLAGMGCLVKARNFLVFQGDVDAIARKSPVELMAHLEQVAGSADLKEEYGRVRKELEEANEAALFSQQRVRGLQSEVAQLGEQGEESDKFQALVAEEKRLREQATLFRVWHLVRGLERGEDEV 525 A+V + Y++G G +L+ R I SGGS YR++ R V + EY G L +G LVKARNFLVFQGDV++IA K+P EL LEQ++GS +LK +Y ++ ++ A E + + Q+ R + SE Q EQ EE++K L + K ++++ L+++W + +E+ DE+ Sbjct: 63 AFVRLVYQLGNGTELQ---------FTRSITNSGGSEYRIDSRVVNWEEYNGKLKSLGILVKARNFLVFQGDVESIASKNPRELTGLLEQISGSDELKGDYEKLEEQKARAEEKSALAYQKKRTIVSERKQKKEQKEEAEKHLRLQDQLKTVKKEHCLWQLWTIGDDIEKANDEI 228
BLAST of mRNA_M-pyrifera_M_contig77116.18172.1 vs. uniprot
Match: A0A7J0H3M1_9ERIC (Structural maintenance of chromosomes protein n=3 Tax=Actinidia TaxID=3624 RepID=A0A7J0H3M1_9ERIC) HSP 1 Score: 114 bits (284), Expect = 1.050e-24 Identity = 68/175 (38.86%), Postives = 107/175 (61.14%), Query Frame = 1 Query: 1 AYVSMSYEVGFGDDLEGFSAGDTISLRREILGSGGSRYRLNGRAVGFGEYEGVLAGMGCLVKARNFLVFQGDVDAIARKSPVELMAHLEQVAGSADLKEEYGRVRKELEEANEAALFSQQRVRGLQSEVAQLGEQGEESDKFQALVAEEKRLREQATLFRVWHLVRGLERGEDEV 525 A+V + Y++G G +L+ R I SGGS YR++ R V + EY G L +G LVKARNFLVFQGDV++IA K+P EL LEQ++GS +LK +Y ++ ++ A E + + Q+ R + SE Q EQ EE++K L + K ++++ L+++W + +E+ DE+ Sbjct: 86 AFVRLVYQLGNGTELQ---------FTRSITNSGGSEYRIDSRVVNWEEYNGKLKSLGILVKARNFLVFQGDVESIASKNPRELTGLLEQISGSDELKGDYEKLEEQKARAEEKSALAYQKKRTIVSERKQKKEQKEEAEKHLRLQDQLKTVKKEHCLWQLWTIGDDIEKANDEI 251
BLAST of mRNA_M-pyrifera_M_contig77116.18172.1 vs. uniprot
Match: A0A0K1P0G9_DIOKA (Structural maintenance of chromosomes protein 1 (Fragment) n=1 Tax=Diospyros kaki TaxID=35925 RepID=A0A0K1P0G9_DIOKA) HSP 1 Score: 113 bits (282), Expect = 1.870e-24 Identity = 68/175 (38.86%), Postives = 107/175 (61.14%), Query Frame = 1 Query: 1 AYVSMSYEVGFGDDLEGFSAGDTISLRREILGSGGSRYRLNGRAVGFGEYEGVLAGMGCLVKARNFLVFQGDVDAIARKSPVELMAHLEQVAGSADLKEEYGRVRKELEEANEAALFSQQRVRGLQSEVAQLGEQGEESDKFQALVAEEKRLREQATLFRVWHLVRGLERGEDEV 525 A+V + Y++G G +++ R I SGGS YR++GR V + EY L +G LVKARNFLVFQGDV++IA K+P EL A LEQ++GS +LK +Y R+ ++ A E + Q+ R + E Q EQ EE++K L + K L+++ L+++W++ + E+ ++V Sbjct: 63 AFVRLVYQLGNGTEIQ---------FTRAITSSGGSEYRIDGRVVNWDEYNAKLKSLGILVKARNFLVFQGDVESIASKNPKELTALLEQISGSEELKGDYERLEEQKGRAEEKSALVYQKKRTIVWERKQKKEQKEEAEKHLRLQEQLKALKKEHFLWQLWNIEKDTEKANEDV 228
BLAST of mRNA_M-pyrifera_M_contig77116.18172.1 vs. uniprot
Match: A0A0K1NZH6_9ASTE (Structural maintenance of chromosomes protein 1 (Fragment) n=1 Tax=Cornus wilsoniana TaxID=367357 RepID=A0A0K1NZH6_9ASTE) HSP 1 Score: 112 bits (281), Expect = 2.550e-24 Identity = 70/175 (40.00%), Postives = 107/175 (61.14%), Query Frame = 1 Query: 1 AYVSMSYEVGFGDDLEGFSAGDTISLRREILGSGGSRYRLNGRAVGFGEYEGVLAGMGCLVKARNFLVFQGDVDAIARKSPVELMAHLEQVAGSADLKEEYGRVRKELEEANEAALFSQQRVRGLQSEVAQLGEQGEESDKFQALVAEEKRLREQATLFRVWHLVRGLERGEDEV 525 A+VS+ Y++G G +L+ R I SGGS Y ++GR V + EY G L +G LVKARNFLVFQGDV++IA K+P EL A LEQ++GS DLK +Y + ++ A E + Q+ R + E Q EQ EE++K L E K L+++ L+++ ++ + +E+ +E+ Sbjct: 63 AFVSLVYQMGNGSELQ---------FTRTITSSGGSEYSIDGRVVTWDEYNGKLKSIGILVKARNFLVFQGDVESIASKNPKELTALLEQISGSDDLKRDYEELEEQKARAEEKSALVYQKKRTIVMERKQKKEQKEEAEKHLRLQEELKSLKKEHFLWQLLNIEKDIEKTSEEL 228
BLAST of mRNA_M-pyrifera_M_contig77116.18172.1 vs. uniprot
Match: A0A448ZRJ5_9STRA (Structural maintenance of chromosomes protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZRJ5_9STRA) HSP 1 Score: 111 bits (278), Expect = 6.690e-24 Identity = 80/202 (39.60%), Postives = 118/202 (58.42%), Query Frame = 1 Query: 67 TISLRREILGSGGSRYRLNGRAVGFGEYEGVLAGMGCLVKARNFLVFQGDVDAIARKSPVELMAHLEQVAGSADLKEEYGRVRKELEEANEAALFSQQRVRGLQSEVAQLGEQGEESDKFQALVAEEKRLREQATLFRVWHLVRGLERGEDEVRVVEQERGRQEAEEKE-------AGKKAVRLVEEHRKARRELGKVQSKA 651 T +R I +G YR+N R V + +YE LA +G LVKARNFLVFQGDV+++ARKSP E + LEQ++ SADLK+ Y EEA ALFS + +G++ E L EQ EE+++F L A +++L L++++H+ E ED + + E + E+ EKE A KKA + H++A E ++ +KA Sbjct: 141 TTKFQRTIHPNGSGDYRINDRVVSYKQYEEKLASIGVLVKARNFLVFQGDVESLARKSPKEFVXLLEQISQSADLKDPYEAALVAKEEAEAEALFSYNKQKGMKGERRLLKEQKEEAERFDRLRANKQQLLTDYYLWQIYHMETDREEREDHLSELRAEVEQAESAEKEQIAALKKAKKKASKARRXHQEADSERVELAAKA 342
BLAST of mRNA_M-pyrifera_M_contig77116.18172.1 vs. uniprot
Match: A0A2R5GJT3_9STRA (Structural maintenance of chromosomes protein n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GJT3_9STRA) HSP 1 Score: 111 bits (277), Expect = 9.020e-24 Identity = 70/181 (38.67%), Postives = 103/181 (56.91%), Query Frame = 1 Query: 1 AYVSMSYEVGFGDDLEGFSAGDTISLRREILGSGGSRYRLNGRAVGFGEYEGVLAGMGCLVKARNFLVFQGDVDAIARKSPVELMAHLEQVAGSADLKEEYGRVRKELEEANEAALFSQQRVRGLQSEVAQLGEQGEESDKFQALVAEEKRLREQATLFRVWHLVRGLERGEDEVRVVEQE 543 A V + YE G+ LEG AG+ I R I +G +Y L GR V Y+ L +G LV+ARNFLVFQGDV++IA KS +L E ++GS L EY +R + EEA +F+ ++ +G+ E Q EQ E++++ A V E +LR L ++W + G+E DE++ +E E Sbjct: 79 ALVRLIYEPAAGE-LEGVKAGEEIEFTRTINANGTCKYMLQGRTVSRDAYDKRLRDIGVLVRARNFLVFQGDVESIASKSTRQLTQFFEDISGSGALATEYDELRAKKEEAETDTIFTYRQKKGITLERKQAREQKNEAERYNAKVRELNQLRTNFFLMQLWQIENGIEGHRDEIKTLESE 258
BLAST of mRNA_M-pyrifera_M_contig77116.18172.1 vs. uniprot
Match: A0A5J5BJY3_9ASTE (Structural maintenance of chromosomes protein n=3 Tax=Cornales TaxID=41934 RepID=A0A5J5BJY3_9ASTE) HSP 1 Score: 110 bits (276), Expect = 1.200e-23 Identity = 69/175 (39.43%), Postives = 107/175 (61.14%), Query Frame = 1 Query: 1 AYVSMSYEVGFGDDLEGFSAGDTISLRREILGSGGSRYRLNGRAVGFGEYEGVLAGMGCLVKARNFLVFQGDVDAIARKSPVELMAHLEQVAGSADLKEEYGRVRKELEEANEAALFSQQRVRGLQSEVAQLGEQGEESDKFQALVAEEKRLREQATLFRVWHLVRGLERGEDEV 525 A+V + Y++G G +L+ R I GSGGS YR++GR V + EY L +G LVKARNFLVFQGDV++IA K+P EL A LEQ++GS +LK EY + ++ A E + Q+ R + E Q EQ EE++K L + K L+++ L+++ ++ + +E+ +E+ Sbjct: 86 AFVRLVYQLGNGSELQ---------FTRAITGSGGSEYRIDGRVVTWDEYNAKLKSLGILVKARNFLVFQGDVESIASKNPRELTALLEQISGSDELKREYEELEEQKARAEEKSALVYQKKRTIVLERKQKKEQKEEAEKHLRLQDQLKSLKKEHFLWQLLNIEKDIEKTSEEL 251 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig77116.18172.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig77116.18172.1 >prot_M-pyrifera_M_contig77116.18172.1 ID=prot_M-pyrifera_M_contig77116.18172.1|Name=mRNA_M-pyrifera_M_contig77116.18172.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=276bp MSYEVGFGDDLEGFSAGDTISLRREILGSGGSRYRLNGRAVGFGEYEGVLback to top mRNA from alignment at M-pyrifera_M_contig77116:31..870+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig77116.18172.1 ID=mRNA_M-pyrifera_M_contig77116.18172.1|Name=mRNA_M-pyrifera_M_contig77116.18172.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=840bp|location=Sequence derived from alignment at M-pyrifera_M_contig77116:31..870+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig77116:31..870+ >mRNA_M-pyrifera_M_contig77116.18172.1 ID=mRNA_M-pyrifera_M_contig77116.18172.1|Name=mRNA_M-pyrifera_M_contig77116.18172.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1656bp|location=Sequence derived from alignment at M-pyrifera_M_contig77116:31..870+ (Macrocystis pyrifera P11B4 male)back to top |