mRNA_M-pyrifera_M_contig77115.18171.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig77115.18171.1 vs. uniprot
Match: A0A3C0ANC6_9PLAN (IS66 family transposase (Fragment) n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A3C0ANC6_9PLAN) HSP 1 Score: 395 bits (1016), Expect = 2.250e-136 Identity = 198/253 (78.26%), Postives = 220/253 (86.96%), Query Frame = 1 Query: 1 YDFTMSRRRDGPQAFLQGFRGYLHADAYGGYDAIYLKSGSNVIEVACWAHARRKFFDARNNYPREAYQVLEWIQQLYDIEDRGRELSADARRALRRAEADPVLDRLDAYLTQLTATVLPKSALAKAVTYARNQWDALRCYTTDGRLTIDNNTSERTLRAQAIGRKNWLFLGSTDAGPRAAVLDTILAGAKRHRLEPWAYVRELLMRQHAENASLEELLPDRWAAQHPEAVLRHRLDESRRKATARRDRRRRRR 759 YDFTMSR RDGPQ FL+ FRGYLHADAY GYDAI+L S S ++EVACWAHARRKFFDAR NYPREA+QVLEWI QLYDIEDR R+LSA+AR LR AEA+P LD+L AYL QL +T+LPKSALAKA+TY RNQWDALR YTTDGRLTIDNNTSERTLR QAIGRKNWLFLGS +AGPRAAVL T+LAGAKRHR+EPW YVRELLMR HA++ LEE+LPD WA H E+VL HRL+ESR KA A+RDRR+RRR Sbjct: 61 YDFTMSRGRDGPQRFLENFRGYLHADAYAGYDAIFLGSDSEIVEVACWAHARRKFFDARKNYPREAHQVLEWIGQLYDIEDRARDLSAEARCELRCAEANPALDQLGAYLAQLASTLLPKSALAKAITYTRNQWDALRRYTTDGRLTIDNNTSERTLRHQAIGRKNWLFLGSKNAGPRAAVLSTVLAGAKRHRIEPWGYVRELLMRLHADDTRLEEMLPDHWATAHSESVLTHRLNESRAKAAAKRDRRQRRR 313
BLAST of mRNA_M-pyrifera_M_contig77115.18171.1 vs. uniprot
Match: A0A2E2C645_9PLAN (Transposase n=2 Tax=Planctomycetaceae TaxID=126 RepID=A0A2E2C645_9PLAN) HSP 1 Score: 397 bits (1020), Expect = 3.570e-134 Identity = 199/253 (78.66%), Postives = 221/253 (87.35%), Query Frame = 1 Query: 1 YDFTMSRRRDGPQAFLQGFRGYLHADAYGGYDAIYLKSGSNVIEVACWAHARRKFFDARNNYPREAYQVLEWIQQLYDIEDRGRELSADARRALRRAEADPVLDRLDAYLTQLTATVLPKSALAKAVTYARNQWDALRCYTTDGRLTIDNNTSERTLRAQAIGRKNWLFLGSTDAGPRAAVLDTILAGAKRHRLEPWAYVRELLMRQHAENASLEELLPDRWAAQHPEAVLRHRLDESRRKATARRDRRRRRR 759 YDFTMSR RDGPQ FL+ FRGYLHADAY GYDAI+L S S ++EVACWAHARRKFFDAR NYPREA+QVLEWI QLYDIEDR R+LSA+AR LR AEA+PVLD+L AYL QL +T+LPKSALAKA+TY RNQWDALR YTTDGRLTIDNNTSERTLR QAIGRKNWLFLGS +AGPRAAVL T+LAGAKRHR+EPW YVRELLMR HA++ LEE+LPD WA H E+VL HRL+ESR KA A+RDRR+RRR Sbjct: 255 YDFTMSRGRDGPQRFLENFRGYLHADAYAGYDAIFLGSDSEIVEVACWAHARRKFFDARKNYPREAHQVLEWIGQLYDIEDRARDLSAEARCELRCAEANPVLDQLGAYLAQLASTLLPKSALAKAITYTRNQWDALRRYTTDGRLTIDNNTSERTLRHQAIGRKNWLFLGSKNAGPRAAVLSTVLAGAKRHRIEPWGYVRELLMRLHADDTRLEEMLPDHWATAHSESVLTHRLNESRAKAAAKRDRRQRRR 507
BLAST of mRNA_M-pyrifera_M_contig77115.18171.1 vs. uniprot
Match: A0A838QWU5_9BACT (IS66 family transposase n=2 Tax=Pirellulales bacterium TaxID=2715253 RepID=A0A838QWU5_9BACT) HSP 1 Score: 363 bits (933), Expect = 3.910e-122 Identity = 180/250 (72.00%), Postives = 207/250 (82.80%), Query Frame = 1 Query: 1 YDFTMSRRRDGPQAFLQGFRGYLHADAYGGYDAIYLKSGSNVIEVACWAHARRKFFDARNNYPREAYQVLEWIQQLYDIEDRGRELSADARRALRRAEADPVLDRLDAYLTQLTATVLPKSALAKAVTYARNQWDALRCYTTDGRLTIDNNTSERTLRAQAIGRKNWLFLGSTDAGPRAAVLDTILAGAKRHRLEPWAYVRELLMRQHAENASLEELLPDRWAAQHPEAVLRHRLDESRRKATARRDRRR 750 YDFT SR RDGP FL GF+GYLHADAYGGYD IYL S ++ EVACWAHARRKFFDA + PREA+Q+LEWI+QLYD+EDR RE SADARR LR AEA+PVLDR++A L QL LPKS L KAV YA+NQW ALR YTTDGRL+IDNN SERTLR QA+GRKNWLF+GS AGPRAAVL TILAGAKRHR+EPW Y+RELL+R H ++ L+E+LPD+WAA HPE+VL +RL+ESRRKA A+ RRR Sbjct: 174 YDFTESRARDGPAKFLAGFQGYLHADAYGGYDHIYLGSNDSIREVACWAHARRKFFDAIKSSPREAHQILEWIRQLYDVEDRARETSADARRTLRAAEAEPVLDRIEACLAQLERRALPKSVLGKAVAYAQNQWPALRRYTTDGRLSIDNNVSERTLRHQAVGRKNWLFVGSAQAGPRAAVLFTILAGAKRHRIEPWTYLRELLLRLHDDDLRLDEMLPDKWAANHPESVLTYRLEESRRKAAAKSTRRR 423
BLAST of mRNA_M-pyrifera_M_contig77115.18171.1 vs. uniprot
Match: A0A524K4V6_9GAMM (IS66 family transposase n=1 Tax=Chromatiales bacterium TaxID=2026725 RepID=A0A524K4V6_9GAMM) HSP 1 Score: 361 bits (927), Expect = 2.540e-120 Identity = 183/257 (71.21%), Postives = 210/257 (81.71%), Query Frame = 1 Query: 1 YDFTMSRRRDGPQAFLQGFRGYLHADAYGGYDAIYLKSGSNVIEVACWAHARRKFFDARNNYPREAYQVLEWIQQLYDIEDRGRELSADARRALRRAEADPVLDRLDAYLTQLTATVLPKSALAKAVTYARNQWDALRCYTTDGRLTIDNNTSERTLRAQAIGRKNWLFLGSTDAGPRAAVLDTILAGAKRHRLEPWAYVRELLMRQHAENASLEELLPDRWAAQHPEAVLRHRLDESRRKATARRDRRRRRRALAK 771 YDFT SR R GP FL G+ GYLHADAY GYDA++L S V EVACW+HARRKFFDA + YPR+A+QVLEWI+QLYDIEDR +LS +ARR LR AE+ P+LDR++AYL +L +VLPKS LAKAVTYARNQW ALR YT DGRLTIDNN SERTLR QA+GR+NWLFLG+ AGPRAAVL TILAGAKRHR+EPWAYVR+LL+R HAE+ LEE+LPDRWAA HPEA+L HRL ESR +A R RR RRA A+ Sbjct: 242 YDFTASRSRAGPTRFLAGYSGYLHADAYTGYDAMFLDVASGVSEVACWSHARRKFFDAVSGYPRQAHQVLEWIRQLYDIEDRAHDLSVEARRELRTAESSPILDRIEAYLAKLARSVLPKSNLAKAVTYARNQWQALRRYTEDGRLTIDNNVSERTLRHQAVGRRNWLFLGNEAAGPRAAVLYTILAGAKRHRIEPWAYVRDLLLRLHAEDPCLEEMLPDRWAAAHPEAILSHRLHESRTQAIRTRARRAHRRARAR 498
BLAST of mRNA_M-pyrifera_M_contig77115.18171.1 vs. uniprot
Match: X0WH03_9ZZZZ (DDE_Tnp_IS66 domain-containing protein (Fragment) n=1 Tax=marine sediment metagenome TaxID=412755 RepID=X0WH03_9ZZZZ) HSP 1 Score: 352 bits (902), Expect = 6.530e-120 Identity = 175/249 (70.28%), Postives = 204/249 (81.93%), Query Frame = 1 Query: 1 YDFTMSRRRDGPQAFLQGFRGYLHADAYGGYDAIYLKSGSNVIEVACWAHARRKFFDARNNYPREAYQVLEWIQQLYDIEDRGRELSADARRALRRAEADPVLDRLDAYLTQLTATVLPKSALAKAVTYARNQWDALRCYTTDGRLTIDNNTSERTLRAQAIGRKNWLFLGSTDAGPRAAVLDTILAGAKRHRLEPWAYVRELLMRQHAENASLEELLPDRWAAQHPEAVLRHRLDESRRKATARRDRR 747 YDFT +R R GP +FL+ + GYLHADAY GYDA+++ G +V+EVACW+HARRKFFDA ++ PREA+QVLEWI QL DIEDR RE S D RR LR E++P+LD+++AYL +L T LPKS L KAVTYARNQW+ALR YT DGRLT DNN SERTLR QAIGRKNWLFLGS AGPR+AVL TILAGAKRHR+EPWAYVR+LL+R HA++ LEELLPDRWAA HPEA+L HRL+ESR KA R RR Sbjct: 7 YDFTNNRTRAGPMSFLESYSGYLHADAYTGYDAMFVDVGRDVLEVACWSHARRKFFDAVDSNPREAHQVLEWIWQLSDIEDRAREWSVDTRRDLRARESNPILDKMEAYLAELAQTTLPKSCLRKAVTYARNQWEALRRYTEDGRLTADNNVSERTLRHQAIGRKNWLFLGSEAAGPRSAVLYTILAGAKRHRIEPWAYVRDLLLRLHADDLRLEELLPDRWAAAHPEAILTHRLEESRAKADRTRRRR 255
BLAST of mRNA_M-pyrifera_M_contig77115.18171.1 vs. uniprot
Match: A0A838QWZ4_9BACT (IS66 family transposase n=1 Tax=Pirellulales bacterium TaxID=2715253 RepID=A0A838QWZ4_9BACT) HSP 1 Score: 352 bits (902), Expect = 2.070e-116 Identity = 176/250 (70.40%), Postives = 205/250 (82.00%), Query Frame = 1 Query: 1 YDFTMSRRRDGPQAFLQGFRGYLHADAYGGYDAIYLKSGSNVIEVACWAHARRKFFDARNNYPREAYQVLEWIQQLYDIEDRGRELSADARRALRRAEADPVLDRLDAYLTQLTATVLPKSALAKAVTYARNQWDALRCYTTDGRLTIDNNTSERTLRAQAIGRKNWLFLGSTDAGPRAAVLDTILAGAKRHRLEPWAYVRELLMRQHAENASLEELLPDRWAAQHPEAVLRHRLDESRRKATARRDRRR 750 YDFT SR RDGP FL+GF+GYLHADAYGGYD IYL S + EVACWAHARRKFFD R++ PR+A+Q+LEWI QLYDIED+ R LSADARR +R + A+PVL R++A L +L LPKSAL+KAV YARNQW AL YT DGRL+IDNN SERTLR QAIGRKNWLFLGS AGPRAA+L T+LAGAKRHR+EPW Y+RELL+R H ++ L+E+LPDRWAAQHPEAVL +RL+ESRRK A+ RRR Sbjct: 250 YDFTESRARDGPAKFLEGFQGYLHADAYGGYDHIYLGSNDAIREVACWAHARRKFFDTRDSSPRDAHQILEWIGQLYDIEDQARPLSADARRDIRASHAEPVLARINARLAELERRALPKSALSKAVWYARNQWQALCRYTEDGRLSIDNNVSERTLRHQAIGRKNWLFLGSQQAGPRAAILFTMLAGAKRHRIEPWTYLRELLIRLHDDDPRLDEMLPDRWAAQHPEAVLTYRLEESRRKTAAQSTRRR 499
BLAST of mRNA_M-pyrifera_M_contig77115.18171.1 vs. uniprot
Match: A0A0F9KVN0_9ZZZZ (Uncharacterized protein n=1 Tax=marine sediment metagenome TaxID=412755 RepID=A0A0F9KVN0_9ZZZZ) HSP 1 Score: 347 bits (891), Expect = 4.800e-114 Identity = 176/257 (68.48%), Postives = 207/257 (80.54%), Query Frame = 1 Query: 1 YDFTMSRRRDGPQAFLQGFRGYLHADAYGGYDAIYLKSGSNVIEVACWAHARRKFFDARNNYPREAYQVLEWIQQLYDIEDRGRELSADARRALRRAEADPVLDRLDAYLTQLTATVLPKSALAKAVTYARNQWDALRCYTTDGRLTIDNNTSERTLRAQAIGRKNWLFLGSTDAGPRAAVLDTILAGAKRHRLEPWAYVRELLMRQHAENASLEELLPDRWAAQHPEAVLRHRLDESRRKATARRDRRRRRRALAK 771 YDFT S RDGP FLQ + GYLHADAY GYD+I+ GS++IEVACW+H R +FF A + PREA+QVLEW++QLYDIEDR + S DARR LR EA+PVLD+++AYL +L LPKS+LAKAVTYARNQW+ALR YT DGRLTIDNN SERTLR QAIGRKN+LFLGS AGPRAAVL TILAGAKRHR+EPWAYV +LL+R +A++ +LEE+LPD WAA HP+A+L HRL+ESRRKA R RR RRA K Sbjct: 307 YDFTNSHSRDGPADFLQSYSGYLHADAYTGYDSIFSAPGSSIIEVACWSHTRSRFFKAVGSNPREAHQVLEWVRQLYDIEDRAHDWSVDARRELRAGEANPVLDKIEAYLAELAPRALPKSSLAKAVTYARNQWEALRRYTDDGRLTIDNNVSERTLRHQAIGRKNYLFLGSEAAGPRAAVLYTILAGAKRHRIEPWAYVCDLLLRLNADDPNLEEMLPDHWAASHPDAILTHRLEESRRKAVRTRARRAHRRARQK 563
BLAST of mRNA_M-pyrifera_M_contig77115.18171.1 vs. uniprot
Match: A0A5B9W533_9BACT (Transposase IS66 family protein n=3 Tax=Aquisphaera giovannonii TaxID=406548 RepID=A0A5B9W533_9BACT) HSP 1 Score: 347 bits (890), Expect = 7.190e-114 Identity = 178/253 (70.36%), Postives = 204/253 (80.63%), Query Frame = 1 Query: 1 YDFTMSRRRDGPQAFLQGFRGYLHADAYGGYDAIYLKSGSNVIEVACWAHARRKFFDARNNYPREAYQVLEWIQQLYDIEDRGRELSADARRALRRAEADPVLDRLDAYLTQLTATVLPKSALAKAVTYARNQWDALRCYTTDGRLTIDNNTSERTLRAQAIGRKNWLFLGSTDAGPRAAVLDTILAGAKRHRLEPWAYVRELLMRQHAENASLEELLPDRWAAQHPEAVLRHRLDESRRKAT---ARRDRRR 750 YDFTMSR RDGP FL+G+RGYL ADAYGGYD IY S + EVACWAHARRKFF+AR+N P EA ++LEW+++LYDIEDRGREL+A+ RR+LRR E+ P+LDR++AY+ +L LPKSAL KA+TYARNQ ALR Y DGRLTIDNN SER LR QAIGRKNWLFLGS AGPRAAVL TILAGAKRHRLEPWAY+RE+L+ A A LE LLPDRWAA HPE VL HRL+ESR++A A RDRRR Sbjct: 306 YDFTMSRERDGPATFLKGYRGYLQADAYGGYDGIYAGSDGAIAEVACWAHARRKFFEARSNAPAEANRILEWVRRLYDIEDRGRELAAEDRRSLRRRESVPILDRIEAYVDELRPRALPKSALGKALTYARNQRAALRRYVEDGRLTIDNNASERVLRLQAIGRKNWLFLGSEAAGPRAAVLFTILAGAKRHRLEPWAYLREVLLHLAAGEADLESLLPDRWAAAHPEHVLEHRLEESRQRAARQKAIRDRRR 558
BLAST of mRNA_M-pyrifera_M_contig77115.18171.1 vs. uniprot
Match: UPI0013EBF35E (IS66 family transposase n=1 Tax=Aquisphaera sp. JC669 TaxID=2712864 RepID=UPI0013EBF35E) HSP 1 Score: 332 bits (851), Expect = 1.900e-108 Identity = 171/256 (66.80%), Postives = 203/256 (79.30%), Query Frame = 1 Query: 1 YDFTMSRRRDGPQAFLQGFRGYLHADAYGGYDAIYLKSGSNVIEVACWAHARRKFFDARNNYPREAYQVLEWIQQLYDIEDRGRELSADARRALRRAEADPVLDRLDAYLTQLTATVLPKSALAKAVTYARNQWDALRCYTTDGRLTIDNNTSERTLRAQAIGRKNWLFLGSTDAGPRAAVLDTILAGAKRHRLEPWAYVRELLMRQHA--ENASLEELLPDRWAAQHPEAVLRHRLDESRRKATARRDRRRRRRA 762 YDFTMSR R+GP FL+ +RGYL ADAYGGYD IY S ++EVACWAHARRKFF+AR N P EA ++LEW++QLYDIEDRGR+L A+ RRALR+ E+ +L +++AY+ +L LPKS++ KA+TYARNQ ALR Y DGRLTIDNN SERTLR QAIGRKNWLFLGS AGPRAAVL TILAGAKRHRLEPW Y+RE+++ A E A LEELLPDRWAA HPE VL HRL+ESR+KA ++ R+ RRA Sbjct: 268 YDFTMSRERNGPATFLKEYRGYLQADAYGGYDGIYTGSDGTLVEVACWAHARRKFFEARANAPAEANRILEWVRQLYDIEDRGRDLMAEDRRALRQRESVSLLGKIEAYIDELAPRTLPKSSMGKALTYARNQRAALRRYVGDGRLTIDNNVSERTLRLQAIGRKNWLFLGSEAAGPRAAVLFTILAGAKRHRLEPWVYLREVILHLAADGEGADLEELLPDRWAAAHPEHVLEHRLEESRQKAARQKATRKHRRA 523
BLAST of mRNA_M-pyrifera_M_contig77115.18171.1 vs. uniprot
Match: L0D757_SINAD (Transposase n=7 Tax=Singulisphaera TaxID=466152 RepID=L0D757_SINAD) HSP 1 Score: 308 bits (790), Expect = 5.760e-99 Identity = 159/245 (64.90%), Postives = 186/245 (75.92%), Query Frame = 1 Query: 1 YDFTMSRRRDGPQAFLQGFRGYLHADAYGGYDAIYLKSGSNVIEVACWAHARRKFFDARNNYPREAYQVLEWIQQLYDIEDRGRELSADARRALRRAEADPVLDRLDAYLTQLTATVLPKSALAKAVTYARNQWDALRCYTTDGRLTIDNNTSERTLRAQAIGRKNWLFLGSTDAGPRAAVLDTILAGAKRHRLEPWAYVRELLMRQHAENASLEELLPDRWAAQHPEAVLRHRLDESRRKATAR 735 YD T SR+RDGP FL GF GYL ADAY GYD +YL S S + EVACWAHARRKF+DAR++ P A +LE I++LYD+EDR R LS +AR+ALR EA P+L+RL L +L LPKSAL +A+TYARNQW AL YT DGRLTIDNN +ER LR QAIGRKNWLFLG+ DAGPRAAVL TI+AGAKRHRLEPWAYV+++LM +E+LLPDRWA HP VL HRL+ESR +A R Sbjct: 299 YDHTASRKRDGPATFLAGFVGYLQADAYAGYDGLYLGSPSAIHEVACWAHARRKFYDARSSSPGNAGLILEAIRRLYDVEDRVRGLSVEARQALRAQEAVPILERLRGDLDRLADQSLPKSALGQALTYARNQWKALCRYTEDGRLTIDNNVAERRLRDQAIGRKNWLFLGNVDAGPRAAVLSTIMAGAKRHRLEPWAYVKDVLMTLSVAPERVEDLLPDRWARNHPGHVLTHRLEESRERARRR 543 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig77115.18171.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig77115.18171.1 >prot_M-pyrifera_M_contig77115.18171.1 ID=prot_M-pyrifera_M_contig77115.18171.1|Name=mRNA_M-pyrifera_M_contig77115.18171.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=256bp MSRRRDGPQAFLQGFRGYLHADAYGGYDAIYLKSGSNVIEVACWAHARRKback to top mRNA from alignment at M-pyrifera_M_contig77115:234..1013- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig77115.18171.1 ID=mRNA_M-pyrifera_M_contig77115.18171.1|Name=mRNA_M-pyrifera_M_contig77115.18171.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=780bp|location=Sequence derived from alignment at M-pyrifera_M_contig77115:234..1013- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig77115:234..1013- >mRNA_M-pyrifera_M_contig77115.18171.1 ID=mRNA_M-pyrifera_M_contig77115.18171.1|Name=mRNA_M-pyrifera_M_contig77115.18171.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1536bp|location=Sequence derived from alignment at M-pyrifera_M_contig77115:234..1013- (Macrocystis pyrifera P11B4 male)back to top |