mRNA_M-pyrifera_M_contig77074.18167.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig77074.18167.1 vs. uniprot
Match: A0A812Z384_9DINO (BGAL5 protein (Fragment) n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812Z384_9DINO) HSP 1 Score: 108 bits (270), Expect = 9.450e-24 Identity = 82/228 (35.96%), Postives = 111/228 (48.68%), Query Frame = 1 Query: 1 AFEIAAWFARGGSHVNYYMFAPLLNHGTWAGASVTQAYAMDAPICPDGLPHPAKAQHLSNLHASLSSSSSALPATSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSRVTFLESDATVAVL-VQFEGRNYTLQPSSVLVVGP-DGSVEYDTGTVVPASFHRQVSSPSPL---SFSHWLEPLTSSSTSHLPSRQYSPAPDQGVANGGIGD-----YVVYQTQGAL 654 A+ WFARGGSHVNYYM+ N G WAGA +T AY++DAP+CPD LPHP KA H + +H++L+ + L A + V FLE+ L V + GR Y +QP SVLVV G+V +DT V + HR VSSP P ++ W EP+ LP+ S +QG A+ +GD +++Y AL Sbjct: 154 AYHTLRWFARGGSHVNYYMWTGGNNVGHWAGAGITNAYSLDAPLCPDLLPHPTKAAHFTAMHSTLAHIAPVLLAAPAQTGKQFTVPYFDGKAFVNGTQQLGWRYPSEQGHGGVVFLENQFMGGELYVLYGGRKYPMQPQSVLVVDEASGNVLFDTADVQTPATHR-VSSPCPDCLGAWQAWQEPVLGGPP--LPNVTSSTPLEQGNASVQLGDAAFNAFMLYDVDVAL 378
BLAST of mRNA_M-pyrifera_M_contig77074.18167.1 vs. uniprot
Match: A0A8J6C2K9_DIALT (Glyco_hydro_35 domain-containing protein n=2 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J6C2K9_DIALT) HSP 1 Score: 74.7 bits (182), Expect = 1.010e-11 Identity = 37/66 (56.06%), Postives = 46/66 (69.70%), Query Frame = 1 Query: 19 WFARGGSHVNYYMFAPLLNHGTWAGASVTQAYAMDAPICPDGLPHPAKAQHLSNLHASLSSSSSAL 216 WFARGGS +NYYMFA G WAGA++T AYA D P+C DGL H AK L +HA+L+S++ L Sbjct: 302 WFARGGSLINYYMFAGGSTRGLWAGAALTTAYAPDVPVCHDGLRHGAKFHFLQLMHAALASAAPEL 367
BLAST of mRNA_M-pyrifera_M_contig77074.18167.1 vs. uniprot
Match: A0A1E7F566_9STRA (Putative beta-galactosidase n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7F566_9STRA) HSP 1 Score: 70.9 bits (172), Expect = 2.060e-10 Identity = 59/203 (29.06%), Postives = 86/203 (42.36%), Query Frame = 1 Query: 7 EIAAWFARGGSHVNYYMFAPLLNHGTWAGASVTQAYAMDAPICPDGLPHPAKAQHLSNLHASLSSSSSALPAT-------------SSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSRVTFLESDATVAVLVQFEGRN--------YTLQPSSVLVVGPDGSVEYDTGTVVPAS--FHRQV----SSPSPLSFSHWLE 534 E WFARGG+H+NYYMF N G A ++ YA DA +C G H K H +LH ++S +S L A S +VTF+E+DA+ +++ N Y+L P+S ++V DG +E+D+ + P S F R+ S P+ LS+S W E Sbjct: 379 EALRWFARGGTHLNYYMFFGGYNRGRQAAGGISNQYATDAALCSSGQRHQPKFNHYQSLHKMIASIASTLLAAETALGNEKPVEVMSKEKEWVIGSEQRMFEYFVNQKETGSTVPVRSKSFKQVTFVENDASEEAVIRIPNINEKAKKYQQYSLAPTSAILV-VDGVLEFDSAIIDPKSMSFKREFADSSSIPALLSWSSWPE 580
BLAST of mRNA_M-pyrifera_M_contig77074.18167.1 vs. uniprot
Match: A0A7R9ZKE6_9STRA (Hypothetical protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9ZKE6_9STRA) HSP 1 Score: 65.1 bits (157), Expect = 1.650e-8 Identity = 70/264 (26.52%), Postives = 109/264 (41.29%), Query Frame = 1 Query: 7 EIAAWFARGGSHVNYYMFAPLLNHGTWAGASVTQAYAMDAPICPDGLPHPAKAQHLSNLHASLSSSSSALPATSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXS----------------RVTFLESDATVAVLVQFEGRN-YTLQPSSVLVVGPDGSVEYDTGTVV-PASFHRQV---SSPSPLSFSHWLEPLTSSSTSHLPSRQYSPAPDQG--VANGGIGDYVVYQTQGALDGGGDVA---IGATQSTAFVVVVDG 720 E+ WFARGG+H+NYYM+ N G A A ++ YA D +CP G H K ++L +LH L++ + AL S + V F+E+DA V G +L P+SV V+ DG+VE+D+ + A ++++ + S LS++ EPL S + P +A+ DY Y+T L+ D A I ++ +FV +DG Sbjct: 72 EVLKWFARGGAHLNYYMWWGGYNRGRSAAAGISNMYAADGVLCPSGQRHHPKFEYLQSLHDMLATIAPALLHRDSALHQDKDLLVKNSNGEWALQGDQRMFEYGAQNTNGPGKDGDGGSENGSLPHVIFVENDANFPVTAWVYGYGAVSLSPASVTVI-VDGAVEFDSAIIDGQAEQYQRIFDEDTASELSWTTQPEPLRLSEKDKKVTASTEPIEQTALNIASDVSSDYAWYETNITLNADMDDATLHIDTAEANSFVAYIDG 334
BLAST of mRNA_M-pyrifera_M_contig77074.18167.1 vs. uniprot
Match: A0A7S3K0E4_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3K0E4_9STRA) HSP 1 Score: 65.1 bits (157), Expect = 1.800e-8 Identity = 31/65 (47.69%), Postives = 41/65 (63.08%), Query Frame = 1 Query: 1 AFEIAAWFARGGSHVNYYMFAPLLNHGTWAGASVTQAYAMDAPICPDGLPHPAKAQHLSNLHASL 195 +++ WF RGGSHVN YM+A N G A A +TQAYA DA IC +G+PH K H + + + L Sbjct: 334 SYQALRWFERGGSHVNLYMWAGGSNFGPSAAAGITQAYAFDAAICANGIPHEPKFDHFAAMFSVL 398
BLAST of mRNA_M-pyrifera_M_contig77074.18167.1 vs. uniprot
Match: A0A7S2ESK3_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S2ESK3_9STRA) HSP 1 Score: 59.3 bits (142), Expect = 1.030e-6 Identity = 26/63 (41.27%), Postives = 38/63 (60.32%), Query Frame = 1 Query: 7 EIAAWFARGGSHVNYYMFAPLLNHGTWAGASVTQAYAMDAPICPDGLPHPAKAQHLSNLHASL 195 ++ WFARGGSH+N+YMF N + + AY+++AP+CP+G H K HL H+ L Sbjct: 149 DVMRWFARGGSHINHYMFWGGYNRERMSAGGIMNAYSLEAPLCPNGQRHYPKFDHLRLCHSLL 211
BLAST of mRNA_M-pyrifera_M_contig77074.18167.1 vs. uniprot
Match: A0A7S1ZWI8_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1ZWI8_9STRA) HSP 1 Score: 59.3 bits (142), Expect = 1.500e-6 Identity = 26/63 (41.27%), Postives = 38/63 (60.32%), Query Frame = 1 Query: 7 EIAAWFARGGSHVNYYMFAPLLNHGTWAGASVTQAYAMDAPICPDGLPHPAKAQHLSNLHASL 195 ++ WFARGGSH+N+YMF N + + AY+++AP+CP+G H K HL H+ L Sbjct: 75 DVMRWFARGGSHINHYMFWGGYNRERMSAGGIMNAYSLEAPLCPNGQRHYPKFDHLRLCHSLL 137
BLAST of mRNA_M-pyrifera_M_contig77074.18167.1 vs. uniprot
Match: B7FYH5_PHATC (Beta-galactosidase n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7FYH5_PHATC) HSP 1 Score: 57.4 bits (137), Expect = 7.230e-6 Identity = 66/258 (25.58%), Postives = 99/258 (38.37%), Query Frame = 1 Query: 1 AFEIAAWFARGGSHVNYYMFAPLLNHGTWAGASVTQAYAMDAPICPDGLPHPAKAQHLSNLHASLSSSSSAL--PATSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSRVTFLESDATVAVLVQFEGRN------YTLQP-SSVLVVGPDGSVEYDTGTV-VPASFHRQVSSPSPLSFSH---WLEPLTSSSTSHLPSRQYSPAPDQGVANGGI--GDYVVYQTQGALD---GGGDVAIGATQSTAFVVVVDG 720 A + WFARGG+H+NYYM+ N G + A + AYA DA +C G K H LH ++ ++ L TS +V FLE+DA + + G + ++P SS +V+ DG V +D+ T+ A R+ P H W EP+ + T P + + DY Y T +D + IG ++TA V +DG Sbjct: 467 ATDALQWFARGGTHLNYYMWWGGYNRGRSSAAGIMNAYATDAFLCSSGQRRHPKYDHFLALHLVIADIAAILLHAPTSLLKNASVEIMDGDDWIVGDNQRQFLYQVLDTHDSKQVIFLENDANTTEMARLTGAKADDSLVFVMKPYSSQIVI--DGIVAFDSSTISTKAMSFRRTLHYEPAVLLHLTSWSEPIAGADTDQNAHVSTEPLEQTNLNSKASISSDYAWYGTDVKIDVVLSQVKLYIGTEKATALAVFIDG 722 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig77074.18167.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 8
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig77074.18167.1 >prot_M-pyrifera_M_contig77074.18167.1 ID=prot_M-pyrifera_M_contig77074.18167.1|Name=mRNA_M-pyrifera_M_contig77074.18167.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=240bp AFEIAAWFARGGSHVNYYMFAPLLNHGTWAGASVTQAYAMDAPICPDGLPback to top mRNA from alignment at M-pyrifera_M_contig77074:94..990- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig77074.18167.1 ID=mRNA_M-pyrifera_M_contig77074.18167.1|Name=mRNA_M-pyrifera_M_contig77074.18167.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=897bp|location=Sequence derived from alignment at M-pyrifera_M_contig77074:94..990- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig77074:94..990- >mRNA_M-pyrifera_M_contig77074.18167.1 ID=mRNA_M-pyrifera_M_contig77074.18167.1|Name=mRNA_M-pyrifera_M_contig77074.18167.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1440bp|location=Sequence derived from alignment at M-pyrifera_M_contig77074:94..990- (Macrocystis pyrifera P11B4 male)back to top |