mRNA_M-pyrifera_M_contig77073.18166.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig77073.18166.1
Unique NamemRNA_M-pyrifera_M_contig77073.18166.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig77073.18166.1 vs. uniprot
Match: A0A5A8CLL7_CAFRO (C2-C2_1 domain-containing protein n=3 Tax=Sar TaxID=2698737 RepID=A0A5A8CLL7_CAFRO)

HSP 1 Score: 144 bits (364), Expect = 5.550e-35
Identity = 130/343 (37.90%), Postives = 166/343 (48.40%), Query Frame = 1
Query:    1 LRDKLEAASRGTDALRAHLALYAGVDGADADAQGAVPLRDLEDALAIVRRKRDRPQH--VDFLDKDRDDAAAASASGDDGDTAAGLRKRLREARAALADAQQGRERIEQLLRTARAYTTDLEAEVADVRNQLRTETTRLASRADAVEKLARRKEDTIRVLRGQVDALLE--------------------DQRELRIHGRRRVMAIKDKDGE---EGGXXXXXEEESALTPAPVPFRAGETVVEVWVVSASIPLRA-----------TSFCVLDFYDFETQASGLAVGDAPAYNFVAAFPCAADDTLLRTCASQGC--ELEVCQARDGDVSVLASCTLPLSRLL 915
            LR + +AA+RGT+ALR HLALY G DG   D  G VPLR+LE+ALA+VR K        +   D D DD    +           LR+RLREARAAL  AQ   ER E+LLRT R +T DLEAEVAD+  +L       A R    E+  RRKE+TIR LR +V AL E                          + G R              +          ++L  AP      ET++EV+VVSA +   A           + F V+DF+DFE+QAS  A    PA+NF + F  A D+ L    A  G    ++V  ARD D  ++   TLPL RLL
Sbjct:  376 LRVRADAAARGTEALRRHLALYTGADG---DGDG-VPLRELEEALAVVRAKGGAAAAGVLALPDTDPDDVGPEA-----------LRRRLREARAALLTAQASAERSERLLRTQREFTKDLEAEVADLTRRLEGGGDAAAGRVRRYEEACRRKEETIRALRAKVLALTEAAGRRPDAGSGSXXXXXXXXXXXXXXLFGARXXXXXXXXXXXXXXDTASVGSASTTASLVAAPGGLAPAETIIEVYVVSAELFADADPSISGMSSLTSLFAVVDFWDFESQASPAAAPPRPAFNFASRFRVAYDEALAWHAAEPGAAVSVDVFAARDADARLVGRATLPLHRLL 703          
BLAST of mRNA_M-pyrifera_M_contig77073.18166.1 vs. uniprot
Match: A0A5A8DXX7_CAFRO (Uncharacterized protein n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8DXX7_CAFRO)

HSP 1 Score: 108 bits (270), Expect = 1.280e-22
Identity = 103/276 (37.32%), Postives = 132/276 (47.83%), Query Frame = 1
Query:    1 LRDKLEAASRGTDALRAHLALYAGVDGADADAQGAVPLRDLEDALAIVRRKRDRPQH--VDFLDKDRDDAAAASASGDDGDTAAGLRKRLREARAALADAQQGRERIEQLLRTARAYTTDLEAEVADVRNQLRTETTRLASRADAVEKLARRKEDTIRVLRGQVDALLE------------------DQRELRIHGRRRVMAIKDKDGE---EGGXXXXXEEESALTPAPVPFRAGETVVEVWVVSASIPLRA-----------TSFCVLDFYDFE 726
            LR + +AA+RGT+ALR HLALY G DG   D  G VPLR+LE+ALA+VR K        +   D D DD    +           LR+RLREARAAL  AQ   ER ++LLRT R +T DLEAEVAD+  +L       A R    E+  RRKE+TIR LR +V AL E                        + G R              +          ++L  AP      ET++EV+VVSA +   A           + F V+DF+DFE
Sbjct:  376 LRVRADAAARGTEALRRHLALYTGADG---DGDG-VPLRELEEALAVVRAKGGAAAAGVLALPDTDPDDVGPEA-----------LRRRLREARAALLTAQASAERSDRLLRTQREFTKDLEAEVADLTRRLEGGGDAAAGRVRRYEEACRRKEETIRALRAKVLALTEAAGRRPDAGSGSXXXXXXXXXXXXLFGARXXXXXXXXXXXXXXDTASVGSASTTASLVAAPGGLAPAETIIEVYVVSAELFADADPSIAGMSSLTSFFAVVDFWDFE 636          
BLAST of mRNA_M-pyrifera_M_contig77073.18166.1 vs. uniprot
Match: A0A2R5G9Z1_9STRA (Protein fantom n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5G9Z1_9STRA)

HSP 1 Score: 88.2 bits (217), Expect = 1.500e-15
Identity = 84/310 (27.10%), Postives = 131/310 (42.26%), Query Frame = 1
Query:    1 LRDKLEAASRGTDALRAHLALYAGVDGADADAQGAVPLRDLEDALAIVRRKRDRPQHVDFLDKDRDDAAAASASGDDGDTAAGLRKRLREARAALADAQQGRERIEQLLRTARAYTTDLEAEVADVRNQLRTETTRLASRADAVEKLARRKEDTIRVLRGQVDALLEDQRELRIHGRRRVMAIKDKDGEEGGXXXXXEEESALTPAPVPFRAGETVVEVWVVSASIP-----LRATSFCVLDFYDFETQASGLAVGDAPAYNFVAAFPCAADDTLLRTCASQGCELEVCQARDGDVSVLASCTLPLSRLL 915
            L+ KLE   RG+  L   + LY+G  G DA         +LE AL +V+R  +    V FL+                 TA    ++L++ +       +  E  E++L+   A   DL  E++D++ +++     L  + +  E L  R+   I  L  Q+  LL+  +                   +           +L  +   F  GE ++E+W+  A +        AT+F +LDFYD+ETQ S L  G  P +NF A +  A D  LLR  AS    LE+ + R GD  +L    L L  LL
Sbjct:  403 LKLKLEQVERGSSVLEDKMRLYSGEAGVDAS--------ELERALTLVKRGSEAMSQVGFLE-----------------TAPASDRKLQDLQMTHLSTCRDLEMAERMLKAQTAINRDLNEEISDLQRKVKGSNNELLRKLEDYETLCARRLQKIHALEAQIKQLLKKAKXXXXXXXXXXXXXXXXXXXDDDAISIV----SLAASASDFGPGENLIEIWIKDAKLDETKLEQAATTFVMLDFYDYETQTSPLVSGLTPNFNFAATYRVAVDHFLLRYMASDTLTLELNRTRHGDFELLGQTALSLRPLL 683          
BLAST of mRNA_M-pyrifera_M_contig77073.18166.1 vs. uniprot
Match: D8LSF7_ECTSI (C2-C2_1 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSF7_ECTSI)

HSP 1 Score: 84.7 bits (208), Expect = 2.030e-14
Identity = 91/303 (30.03%), Postives = 137/303 (45.21%), Query Frame = 1
Query:   31 GTDALRAHLALYAGVDGADADAQGAVPLRDLEDALAIVRRKRDRPQHVD-FLDKDRDDAAAASASGDDGDTAAGLRKRLREARAALADAQQGRERIEQLLRTARAYTTDLEAEVADVRNQLRTETTRLASRADAVEKLARRKEDTIRVLRGQVDALLEDQRELRIHGRRRVMAIKDKDGEEGGXXXXXEEESALTP--APVPFRAGETVVEVWVVSASIP-----LRATSFCVLDFYDFETQASGLAVGDAPAYNFVAAFPCAADDTLLRTCASQGCELEVCQARDGDVSVLASCTLPLSRLL 915
            G   +   + LYAG +  D        L +LE AL IVRRK   P     FL+   ++         D D    LR++L+  + +  +  +  ER E++L+   +   DL  E+ +   +   +   L  +    E LA  +   I  L  QV  LL          R+R+ A     G+        E+ESAL    A   F A + +VEVWVV A +        ++SF V+DF+DFE+QA+ L  G +PA++F   F    DD  LR   ++G  LE+ QAR  D  ++    + LS LL
Sbjct:  428 GAQLMADKMRLYAGDEDID--------LEELERALTIVRRKMADPAAFPGFLENPEEE---------DMDNVPALRRKLQRVQVSNLNLTRELERAERMLKAQMSINRDLHVELEEACRRSTLDRGELGQKLRDFEALALERLAVINRLEAQVKQLLYGPAR-----RKRLGAA----GDASAAQMEQEQESALLSELAEGDFSADQNIVEVWVVGAELEPGVLSAGSSSFIVVDFFDFESQATPLLPGVSPAFDFATTFKVTVDDFFLRFLGTEGLVLELNQARAADFELVGRRQVALSGLL 704          
BLAST of mRNA_M-pyrifera_M_contig77073.18166.1 vs. uniprot
Match: A0A7S3ZSY2_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZSY2_9STRA)

HSP 1 Score: 84.7 bits (208), Expect = 2.160e-14
Identity = 81/296 (27.36%), Postives = 137/296 (46.28%), Query Frame = 1
Query:   61 LYAGVDGADADAQGAVPLRDLEDALAIVRRKRD--RPQHVDFLDKDRDDAAAASASGDDGDTAAGLRKRLREARAALADAQQGRERIEQLLRTARAYTTDLEAEVADVRNQLRTETTRLASRADAVEKLARRKEDTIRVLRGQVDALLEDQRELRIH-GRRRVMAIKDKDGEEGGXXXXXEEESALTPAPVP---FRAGETVVEVWVVSAS-----IPLRATSFCVLDFYDFETQASGLAVGDAPAYNFVAAFPCAADDTLLRTCASQGCELEVCQARDGDVSVLASCTLPLSRLL 915
            L+ G+DG D        + +LE AL IV+++     P   DFL+K   +        D        +K+L E R      Q   ER E++L+   +   DL  E+ D  ++   +   L  + +  E L  ++   I  L  Q+       ++ R   G+ ++ +I + D  E        E + L  A +     +  E +VEVWVVSAS     +   A++F V+DF  +E+QA+    G  P ++F  ++  + DD  LR  A++   LE+C+A+  D  +LA  ++PL+ LL
Sbjct:  393 LFGGLDGVD--------MEELERALTIVKKREHMKNPDDFDFLEKIDPEIGNDLRQAD-------FKKKLEELRERHLQTQYELERAEKMLKVQMSINRDLHLELEDASSKKSAKHAELLQKVEDYEALNVKRLQRIHTLEAQL-------KQARYSTGKSKLRSIDEDDRSE------TTESTNLLLAELQDGDLQPDENLVEVWVVSASLDEGVVSPNASTFAVVDFLTYESQATQWLPGSKPEFDFATSYKVSVDDLFLRYLATESLSLEICEAQQADYELLAKASIPLAPLL 660          
BLAST of mRNA_M-pyrifera_M_contig77073.18166.1 vs. uniprot
Match: A0A7S3ZSY1_9STRA (Hypothetical protein (Fragment) n=3 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZSY1_9STRA)

HSP 1 Score: 84.7 bits (208), Expect = 2.160e-14
Identity = 81/296 (27.36%), Postives = 137/296 (46.28%), Query Frame = 1
Query:   61 LYAGVDGADADAQGAVPLRDLEDALAIVRRKRD--RPQHVDFLDKDRDDAAAASASGDDGDTAAGLRKRLREARAALADAQQGRERIEQLLRTARAYTTDLEAEVADVRNQLRTETTRLASRADAVEKLARRKEDTIRVLRGQVDALLEDQRELRIH-GRRRVMAIKDKDGEEGGXXXXXEEESALTPAPVP---FRAGETVVEVWVVSAS-----IPLRATSFCVLDFYDFETQASGLAVGDAPAYNFVAAFPCAADDTLLRTCASQGCELEVCQARDGDVSVLASCTLPLSRLL 915
            L+ G+DG D        + +LE AL IV+++     P   DFL+K   +        D        +K+L E R      Q   ER E++L+   +   DL  E+ D  ++   +   L  + +  E L  ++   I  L  Q+       ++ R   G+ ++ +I + D  E        E + L  A +     +  E +VEVWVVSAS     +   A++F V+DF  +E+QA+    G  P ++F  ++  + DD  LR  A++   LE+C+A+  D  +LA  ++PL+ LL
Sbjct:  393 LFGGLDGVD--------MEELERALTIVKKREHMKNPDDFDFLEKIDPEIGNDLRQAD-------FKKKLEELRERHLQTQYELERAEKMLKVQMSINRDLHLELEDASSKKSAKHAELLQKVEDYEALNVKRLQRIHTLEAQL-------KQARYSTGKSKLRSIDEDDRSE------TTESTNLLLAELQDGDLQPDENLVEVWVVSASLDEGVVSPNASTFAVVDFLTYESQATQWLPGSKPEFDFATSYKVSVDDLFLRYLATESLSLEICEAQQADYELLAKASIPLAPLL 660          
BLAST of mRNA_M-pyrifera_M_contig77073.18166.1 vs. uniprot
Match: A0A6H5KSV9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSV9_9PHAE)

HSP 1 Score: 73.2 bits (178), Expect = 1.290e-10
Identity = 66/210 (31.43%), Postives = 98/210 (46.67%), Query Frame = 1
Query:  307 ERIEQLLRTARAYTTDLEAEVADVRNQLRTETTRLASRADAVEKLARRKEDTIRVLRGQVDALLEDQRELRIHGRRRVMAIKDKDGEEGGXXXXXEEESALTP--APVPFRAGETVVEVWVVSASIP-----LRATSFCVLDFYDFETQASGLAVGDAPAYNFVAAFPCAADDTLLRTCASQGCELEVCQARDGDVSVLASCTLPLSRLL 915
            ER E++L+   +   DL  E+ +   +   +   L  +    E LA  +   I  L  QV  LL        +G  R   +    G+        E+ESAL    A   F A + +VEVWVV A +        ++SF V+DF+DFE+QA+ L  G +PA++F   F    DD  LR   ++G  LE+ QAR  D  ++    + LS LL
Sbjct:   55 ERAERMLKAQMSINRDLHVELEEACRRSTLDRGELGQKLRDFEALALERLTVINRLEAQVKQLL--------YGPARRQRLG-APGDASAAQMEQEQESALLSELAEGDFSADQNIVEVWVVGAELEPGVLSAGSSSFIVVDFFDFESQATPLLPGVSPAFDFATTFKVTVDDFFLRFLGTEGLVLELNQARAADFELVGRRQVALSGLL 255          
BLAST of mRNA_M-pyrifera_M_contig77073.18166.1 vs. uniprot
Match: A0A7S1TSY9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TSY9_9STRA)

HSP 1 Score: 71.2 bits (173), Expect = 5.710e-10
Identity = 82/314 (26.11%), Postives = 133/314 (42.36%), Query Frame = 1
Query:    1 LRDKLEAASRGTDALRAHLALYAGVDGADADAQGAVPLRDLEDALAIVRRKRDRPQHVDFLDKDRDDAAAASASGDDG-DTAAGLRKRLREARAALADAQQGRERIEQLLRTARAYTTDLEAEVADVRNQLRTETTRLASRADAVEKLARRKEDTIRVLRGQVDALLEDQRELRIHGRRRVMAIKDKDGEEGGXXXXXEEESALTPAPVPFRAGETVVEVWVVSASIPLRA-----TSFCVLDFYDFETQASGLAVGDAPAYNFVAAFPCAADDTLLRTCASQGCELEVCQARDG-DVSVLASCTLPLSRLLFA 921
            LR K+     G   L+   + +A + G D DA       +LE ALA+VRR+ + P  + FL++           G+ G DT  GLR+RL+E +    + Q+  ER E++L+       +L  EV ++                            I++L  QV   L   +     G    +A+   D  E         + A    P      E +VEVW+    +   A      +FC++DFYDFE+ A+ +  G  P ++F   +  + DD  LR  A++   +E+   + G D  +LA   +PL  +L A
Sbjct:  199 LRLKVREGEAGQALLQTVPSSFASLYGDDIDAA------ELEKALAMVRRRSENPTGISFLEQ-----------GEGGEDTVPGLRRRLQELQVRNLELQREVERAERMLKAQTKINRELHIEVEELSKSAXXXXXXXXXXXXXXXXXXXXXXXXIQMLEAQVKQHLYSLQHGGKGGAGPALALPMDDEAESVAETAYAADLAADIGP-----DENIVEVWIRKVELKDGALEEGSNTFCIVDFYDFESVATPIMAGLTPGFDFATTYKVSLDDFFLRYLATENLAVELNLTKRGADFDILARAQIPLGSMLEA 490          
BLAST of mRNA_M-pyrifera_M_contig77073.18166.1 vs. uniprot
Match: A0A836CCF4_9STRA (EF-hand domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CCF4_9STRA)

HSP 1 Score: 63.2 bits (152), Expect = 2.930e-7
Identity = 65/234 (27.78%), Postives = 95/234 (40.60%), Query Frame = 1
Query:  307 ERIEQLLRTARAYTTDLEAEVADVRNQLRTETTRLASRADAVEKLARRKEDTIRVLRGQVDALLEDQRELRIHGRRRVMAIKDKDGEEGGXXXXXEEESALTPAPVPFRAGETVVEVWVVSAS-----IPLRATSFCVLDFYDFETQASGLAVGDAPAYNFVAAFPCAADDTLL--------------------------RTCASQGCELEVCQARDGDVSVLASCTLPLSRLL 915
            ER E++L+       DL  E+ +   Q+  +   +A +    E LA ++   ++ L  Q+       R+LR  G             E G     EE      A   F   + VVEVWVV A      I   A+SF VLDF+D+E+QA+ L  G  P ++F   +    DD  L                          R  A++G  LE+ Q R  D  ++A C + LS LL
Sbjct:  614 ERAERMLKAQMGINRDLHLELEERARQMDADKRGIAQKLADFEALALQRLARVQELEAQL-------RQLRYMGGNGAAP-------EDGSDAAAEETLLAELADGDFGPDQNVVEVWVVGAQLKEGVIAANASSFAVLDFFDYESQATPLLAGREPRFDFATTYKVTVDDLFLSIEWHDGYSCXXXXXXXXXXXXXXXXRYLATEGLTLELNQTRAADFDLVARCKIALSSLL 833          
BLAST of mRNA_M-pyrifera_M_contig77073.18166.1 vs. uniprot
Match: A0A482SAF9_9ARCH (C2-C2_1 domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SAF9_9ARCH)

HSP 1 Score: 60.5 bits (145), Expect = 1.400e-6
Identity = 71/285 (24.91%), Postives = 131/285 (45.96%), Query Frame = 1
Query:   31 GTDALRAHLALYAGVDGADADAQGAVPLRDLEDALAIVRRKRDRPQHVDFLDKDRDDAAAASASGDDGDTAAGLRKRLREARAALADAQQGRERIEQLLRTARAYTTDLEAEV-ADVRNQLRTETTRLASRADAVEKLARRKEDTIRVLRGQVDALLEDQRELRIHGRRRVMAIKDKDGEEGGXXXXXEEESALTPAPV------PFRAGETVVEVWVVSASI-----PLRATSFCVLDFYDFETQASGLAVGDAPAYNFVAAFPCAADDTLLRTCASQGCELEV 849
            G  AL   L +Y G DG D        +  LE AL +V+R+    + + FL+   ++      +         L+++L + +       Q   R+E LL+       DL  E+ A VR++ + +   L  +A+  E++A ++ D I  L  Q+   +     L    + + ++I   + E+G        +++   A +        R  E ++EVWV  A+I     P  +++F V+DF+D+E+QA+ L  G  P ++F A +  + DD +LR  A+    +E+
Sbjct:  201 GNSALNDKLKMYTGSDGVD--------IESLERALTMVKRRDAAMERLPFLEDPENEKLITLPT---------LKRKLSDLQQLNLRLTQDNARLENLLKMQSNLNRDLHKEIEASVRSKDK-DKLELEKKAEDFEQIALQRLDKIHSLEAQLRQFVYG---LSKTSKNKPISIVSPEKEDGIYSASEIYDASDLIAELLGDRDGDLRPDENLMEVWVKEANIKDGVLPPASSTFVVVDFFDYESQATTLLTGMKPQWDFAATYKLSVDDFMLRYFATGAITIEL 464          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig77073.18166.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 12
Match NameE-valueIdentityDescription
A0A5A8CLL7_CAFRO5.550e-3537.90C2-C2_1 domain-containing protein n=3 Tax=Sar TaxI... [more]
A0A5A8DXX7_CAFRO1.280e-2237.32Uncharacterized protein n=1 Tax=Cafeteria roenberg... [more]
A0A2R5G9Z1_9STRA1.500e-1527.10Protein fantom n=1 Tax=Hondaea fermentalgiana TaxI... [more]
D8LSF7_ECTSI2.030e-1430.03C2-C2_1 domain-containing protein n=1 Tax=Ectocarp... [more]
A0A7S3ZSY2_9STRA2.160e-1427.36Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A7S3ZSY1_9STRA2.160e-1427.36Hypothetical protein (Fragment) n=3 Tax=Pelagomona... [more]
A0A6H5KSV9_9PHAE1.290e-1031.43Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S1TSY9_9STRA5.710e-1026.11Hypothetical protein (Fragment) n=1 Tax=Phaeomonas... [more]
A0A836CCF4_9STRA2.930e-727.78EF-hand domain-containing protein n=1 Tax=Tribonem... [more]
A0A482SAF9_9ARCH1.400e-624.91C2-C2_1 domain-containing protein n=1 Tax=archaeon... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig77073contigM-pyrifera_M_contig77073:38..979 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score90.1
Seed ortholog evalue2e-15
Seed eggNOG ortholog2880.D8LSF7
Preferred nameRPGRIP1L
KEGG koko:K16512,ko:K16550
Hectar predicted targeting categoryother localisation
GOsGO:0001654,GO:0001655,GO:0001664,GO:0001701,GO:0001736,GO:0001738,GO:0001754,GO:0001822,GO:0001889,GO:0002009,GO:0003002,GO:0003008,GO:0003674,GO:0005102,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005813,GO:0005815,GO:0005829,GO:0005856,GO:0005874,GO:0005879,GO:0005881,GO:0005886,GO:0005911,GO:0005929,GO:0005930,GO:0006935,GO:0006996,GO:0007163,GO:0007164,GO:0007275,GO:0007368,GO:0007389,GO:0007399,GO:0007417,GO:0007420,GO:0007423,GO:0007507,GO:0007600,GO:0007601,GO:0008104,GO:0008150,GO:0008277,GO:0008283,GO:0008589,GO:0009605,GO:0009653,GO:0009790,GO:0009792,GO:0009799,GO:0009855,GO:0009887,GO:0009888,GO:0009966,GO:0009968,GO:0009987,GO:0010646,GO:0010648,GO:0015630,GO:0016020,GO:0016043,GO:0021532,GO:0021537,GO:0021549,GO:0021591,GO:0021670,GO:0021772,GO:0021915,GO:0021988,GO:0022008,GO:0022037,GO:0022038,GO:0022406,GO:0022607,GO:0022615,GO:0023051,GO:0023057,GO:0030030,GO:0030031,GO:0030054,GO:0030154,GO:0030182,GO:0030326,GO:0030900,GO:0030902,GO:0031862,GO:0031870,GO:0031974,GO:0031981,GO:0032391,GO:0032501,GO:0032502,GO:0032838,GO:0033036,GO:0033365,GO:0034613,GO:0035107,GO:0035108,GO:0035113,GO:0035115,GO:0035116,GO:0035136,GO:0035137,GO:0035253,GO:0035295,GO:0035869,GO:0036064,GO:0040011,GO:0042221,GO:0042330,GO:0042461,GO:0042462,GO:0042995,GO:0043005,GO:0043009,GO:0043010,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043583,GO:0043584,GO:0044085,GO:0044422,GO:0044424,GO:0044428,GO:0044430,GO:0044441,GO:0044444,GO:0044446,GO:0044447,GO:0044463,GO:0044464,GO:0044782,GO:0045744,GO:0046530,GO:0048468,GO:0048513,GO:0048519,GO:0048523,GO:0048583,GO:0048585,GO:0048592,GO:0048598,GO:0048666,GO:0048699,GO:0048729,GO:0048731,GO:0048732,GO:0048736,GO:0048839,GO:0048856,GO:0048869,GO:0050789,GO:0050794,GO:0050877,GO:0050896,GO:0050953,GO:0051179,GO:0051640,GO:0051641,GO:0060039,GO:0060041,GO:0060173,GO:0060271,GO:0060322,GO:0060429,GO:0060541,GO:0061008,GO:0061351,GO:0061512,GO:0065007,GO:0070013,GO:0070727,GO:0070925,GO:0071840,GO:0071944,GO:0072001,GO:0072359,GO:0072657,GO:0090102,GO:0090596,GO:0097014,GO:0097458,GO:0097499,GO:0097500,GO:0097711,GO:0097730,GO:0097731,GO:0097733,GO:0099080,GO:0099081,GO:0099512,GO:0099513,GO:0099568,GO:0120025,GO:0120031,GO:0120036,GO:0120038,GO:0140056,GO:1903441,GO:1904491,GO:1905515,GO:1990778
EggNOG free text desc.thromboxane A2 receptor binding
EggNOG OGs2CMYB@1,2QSQG@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01009,ko03036
Exons1
Model size942
Cds size942
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816671.6703484-CDS-M-pyrifera_M_contig77073:37..9791622816671.6703484-CDS-M-pyrifera_M_contig77073:37..979Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig77073 38..979 +
1692278110.5480487-CDS-M-pyrifera_M_contig77073:37..9791692278110.5480487-CDS-M-pyrifera_M_contig77073:37..979Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig77073 38..979 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig77073.18166.1prot_M-pyrifera_M_contig77073.18166.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig77073 38..979 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig77073.18166.1

>prot_M-pyrifera_M_contig77073.18166.1 ID=prot_M-pyrifera_M_contig77073.18166.1|Name=mRNA_M-pyrifera_M_contig77073.18166.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=314bp
LRDKLEAASRGTDALRAHLALYAGVDGADADAQGAVPLRDLEDALAIVRR
KRDRPQHVDFLDKDRDDAAAASASGDDGDTAAGLRKRLREARAALADAQQ
GRERIEQLLRTARAYTTDLEAEVADVRNQLRTETTRLASRADAVEKLARR
KEDTIRVLRGQVDALLEDQRELRIHGRRRVMAIKDKDGEEGGEGDEGEEE
SALTPAPVPFRAGETVVEVWVVSASIPLRATSFCVLDFYDFETQASGLAV
GDAPAYNFVAAFPCAADDTLLRTCASQGCELEVCQARDGDVSVLASCTLP
LSRLLFAPAVPSGP
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mRNA from alignment at M-pyrifera_M_contig77073:38..979+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig77073.18166.1 ID=mRNA_M-pyrifera_M_contig77073.18166.1|Name=mRNA_M-pyrifera_M_contig77073.18166.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=942bp|location=Sequence derived from alignment at M-pyrifera_M_contig77073:38..979+ (Macrocystis pyrifera P11B4 male)
TTGCGAGACAAGTTAGAAGCTGCATCCCGTGGAACAGATGCACTGCGTGC ACACTTGGCTCTCTATGCTGGTGTGGATGGTGCAGATGCCGATGCGCAAG GTGCAGTCCCACTCCGTGATCTGGAAGATGCGTTGGCAATTGTTCGACGA AAGAGAGATCGTCCACAACATGTCGATTTCCTTGATAAAGATCGAGACGA TGCTGCAGCAGCTTCTGCAAGTGGTGATGATGGTGACACTGCTGCAGGGT TGAGAAAGCGATTGAGAGAAGCGAGAGCTGCACTTGCTGATGCACAACAA GGCAGAGAACGAATTGAACAACTCTTACGTACTGCAAGAGCATATACCAC TGATCTTGAAGCAGAAGTTGCTGACGTACGGAACCAATTGCGAACAGAAA CGACACGGCTTGCATCTCGGGCAGATGCTGTGGAGAAGTTGGCAAGGAGA AAAGAAGATACGATCCGTGTCTTGCGTGGACAGGTTGATGCATTGCTTGA AGATCAACGTGAGCTTCGTATTCATGGGCGGCGTCGTGTCATGGCGATCA AGGACAAAGATGGTGAAGAGGGAGGGGAAGGAGATGAGGGAGAAGAGGAG AGTGCACTCACACCAGCTCCAGTTCCGTTCCGGGCTGGTGAAACAGTTGT AGAAGTTTGGGTGGTATCTGCTTCGATTCCTCTTCGTGCTACCTCATTTT GTGTTCTTGATTTTTATGACTTTGAAACACAAGCAAGTGGCTTGGCAGTT GGAGATGCTCCAGCTTACAATTTTGTTGCTGCTTTCCCATGTGCGGCTGA TGATACTTTGTTGCGTACATGTGCAAGCCAAGGATGTGAGCTTGAAGTGT GTCAGGCAAGAGATGGTGATGTGAGTGTGTTGGCATCTTGCACTTTGCCA TTGTCACGCCTTCTCTTTGCACCAGCTGTTCCATCAGGACCA
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig77073:38..979+

>mRNA_M-pyrifera_M_contig77073.18166.1 ID=mRNA_M-pyrifera_M_contig77073.18166.1|Name=mRNA_M-pyrifera_M_contig77073.18166.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1884bp|location=Sequence derived from alignment at M-pyrifera_M_contig77073:38..979+ (Macrocystis pyrifera P11B4 male)
TTGCGAGACAAGTTAGAAGCTGCATCCCGTGGAACAGATGCACTGCGTGC
ACACTTGGCTCTCTATGCTGGTGTGGATGGTGCAGATGCCGATGCGCAAG
GTGCAGTCCCACTCCGTGATCTGGAAGATGCGTTGGCAATTGTTCGACGA
AAGAGAGATCGTCCACAACATGTCGATTTCCTTGATAAAGATCGAGACGA
TGCTGCAGCAGCTTCTGCAAGTGGTGATGATGGTGACACTGCTGCAGGGT
TGAGAAAGCGATTGAGAGAAGCGAGAGCTGCACTTGCTGATGCACAACAA
GGCAGAGAACGAATTGAACAACTCTTACGTACTGCAAGAGCATATACCAC
TGATCTTGAAGCAGAAGTTGCTGACGTACGGAACCAATTGCGAACAGAAA
CGACACGGCTTGCATCTCGGGCAGATGCTGTGGAGAAGTTGGCAAGGAGA
AAAGAAGATACGATCCGTGTCTTGCGTGGACAGGTTGATGCATTGCTTGA
AGATCAACGTGAGCTTCGTATTCATGGGCGGCGTCGTGTCATGGCGATCA
AGGACAAAGATGGTGAAGAGGGAGGGGAAGGAGATGAGGGAGAAGAGGAG
AGTGCACTCACACCAGCTCCAGTTCCGTTCCGGGCTGGTGAAACAGTTGT
AGAAGTTTGGGTGGTATCTGCTTCGATTCCTCTTCGTGCTACCTCATTTT
GTGTTCTTGATTTTTATGACTTTGAAACACAAGCAAGTGGCTTGGCAGTT
GGAGATGCTCCAGCTTACAATTTTGTTGCTGCTTTCCCATGTGCGGCTGA
TGATACTTTGTTGCGTACATGTGCAAGCCAAGGATGTGAGCTTGAAGTGT
GTCAGGCAAGAGATGGTGATGTGAGTGTGTTGGCATCTTGCACTTTGCCA
TTGTCACGCCTTCTCTTTGCACCAGCTGTTCCATCAGGACCATTGCGAGA
CAAGTTAGAAGCTGCATCCCGTGGAACAGATGCACTGCGTGCACACTTGG
CTCTCTATGCTGGTGTGGATGGTGCAGATGCCGATGCGCAAGGTGCAGTC
CCACTCCGTGATCTGGAAGATGCGTTGGCAATTGTTCGACGAAAGAGAGA
TCGTCCACAACATGTCGATTTCCTTGATAAAGATCGAGACGATGCTGCAG
CAGCTTCTGCAAGTGGTGATGATGGTGACACTGCTGCAGGGTTGAGAAAG
CGATTGAGAGAAGCGAGAGCTGCACTTGCTGATGCACAACAAGGCAGAGA
ACGAATTGAACAACTCTTACGTACTGCAAGAGCATATACCACTGATCTTG
AAGCAGAAGTTGCTGACGTACGGAACCAATTGCGAACAGAAACGACACGG
CTTGCATCTCGGGCAGATGCTGTGGAGAAGTTGGCAAGGAGAAAAGAAGA
TACGATCCGTGTCTTGCGTGGACAGGTTGATGCATTGCTTGAAGATCAAC
GTGAGCTTCGTATTCATGGGCGGCGTCGTGTCATGGCGATCAAGGACAAA
GATGGTGAAGAGGGAGGGGAAGGAGATGAGGGAGAAGAGGAGAGTGCACT
CACACCAGCTCCAGTTCCGTTCCGGGCTGGTGAAACAGTTGTAGAAGTTT
GGGTGGTATCTGCTTCGATTCCTCTTCGTGCTACCTCATTTTGTGTTCTT
GATTTTTATGACTTTGAAACACAAGCAAGTGGCTTGGCAGTTGGAGATGC
TCCAGCTTACAATTTTGTTGCTGCTTTCCCATGTGCGGCTGATGATACTT
TGTTGCGTACATGTGCAAGCCAAGGATGTGAGCTTGAAGTGTGTCAGGCA
AGAGATGGTGATGTGAGTGTGTTGGCATCTTGCACTTTGCCATTGTCACG
CCTTCTCTTTGCACCAGCTGTTCCATCAGGACCA
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