mRNA_M-pyrifera_M_contig7705.18160.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig7705.18160.1 vs. uniprot
Match: D8LQK0_ECTSI (Deoxyribodipyrimidine photo-lyase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQK0_ECTSI) HSP 1 Score: 320 bits (821), Expect = 1.700e-105 Identity = 156/185 (84.32%), Postives = 167/185 (90.27%), Query Frame = 1 Query: 1 QVDAHNVVPVWTTSDHQETMARTIRPKIHARPDLLGDIPELSLNPRDTKLPEATDWSAARGSLDLDLSVPEVTWLVPGAKAASDNLQSFIESRLKGFADLSNDPNEDVCSHMSAYFNMGQMSAQAAVMRVKASRRFPDGVKAFMEQGVVRRELGDNLCFFNANYDNLSGAADWARESLEAHADDQ 555 QVDAHNVVPVW TSD QETMARTIRPKIHARPD LG IPELS NP+ TKLP ATDW AA+ SLDLD SVPE++WL PGAK ASDNLQSFIE+R+KGFADLSN+PNEDVCSHMS YFN+GQMSAQAAVMRVKASRR PDGVKAF+EQGVVRREL DN CF+N NYDNLSGAA WARESLEAHA+DQ Sbjct: 159 QVDAHNVVPVWATSDKQETMARTIRPKIHARPDFLGAIPELSPNPQGTKLPAATDWKAAQTSLDLDRSVPEISWLKPGAKGASDNLQSFIETRMKGFADLSNNPNEDVCSHMSPYFNLGQMSAQAAVMRVKASRRHPDGVKAFVEQGVVRRELSDNFCFYNDNYDNLSGAAGWARESLEAHANDQ 343
BLAST of mRNA_M-pyrifera_M_contig7705.18160.1 vs. uniprot
Match: A0A835Z6D6_9STRA (Deoxyribodipyrimidine photo-lyase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6D6_9STRA) HSP 1 Score: 198 bits (503), Expect = 9.540e-58 Identity = 98/184 (53.26%), Postives = 127/184 (69.02%), Query Frame = 1 Query: 1 QVDAHNVVPVWTTSDHQETMARTIRPKIHARPDLLGDIPELSLNPRDTKLPEATDWSAARGSLDLDLSVPEVTWLVPGAKAASDNLQSFIESRLKGFADLSNDPNEDVCSHMSAYFNMGQMSAQAAVMRVKASRRFPDGVKAFMEQGVVRRELGDNLCFFNANYDNLSGAADWARESLEAHADD 552 QVDAHN+VPVWT SD QET ART+RPKI +L D+P L+ N T LP DW+AAR +L++D SV EV PGA A LQ FI++RLK FA NDPN S +S Y + GQ+S Q AV+ V+AS++ + K+++E+ VVRREL DN CF+NA+YD+L+ AA+WAR+SL HA D Sbjct: 186 QVDAHNIVPVWTVSDKQETGARTLRPKIDRLLTMLTDVPPLAPNAEGTALPPRPDWAAARETLEVDRSVQEVKTFTPGAAAGRAKLQDFIDNRLKLFATGRNDPNVHASSDLSPYLHFGQLSVQRAVLEVRASKKSSESTKSYVEEAVVRRELSDNFCFYNADYDSLAAAANWARDSLALHASD 369
BLAST of mRNA_M-pyrifera_M_contig7705.18160.1 vs. uniprot
Match: W7U9T4_9STRA (Deoxyribodipyrimidine photo-lyase n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U9T4_9STRA) HSP 1 Score: 176 bits (447), Expect = 8.620e-51 Identity = 92/196 (46.94%), Postives = 117/196 (59.69%), Query Frame = 1 Query: 1 QVDAHNVVPVWTTSDHQETMARTIRPKIH-ARPDLLGDIPELSLNPRDTKL----------PEATDWSAARGSLDLDLSVPEVTWLVPGAKAASDNLQSFIESRLKGFADLSNDPNEDVCSHMSAYFNMGQMSAQAAVMRVKASRRFPDGVKAFMEQGVVRRELGDNLCFFNANYDNLSGAADWARESLEAHADDQ 555 QVDAHN+VPVW S E ARTIR KIH P P L P D PE + G L LD V E+ WL PGA+A +NL +F+E L+ FA+ NDP E S+MS YFN GQ+S QA +++VKA +R+ D + AF+E+GVVRREL DN CF+ YD+L+ AA WA+ESL H +D+ Sbjct: 184 QVDAHNIVPVWQASPKLEVGARTIRKKIHDLLPKYFTPFPAEGLAPNDAAAVRALPGRSAPPEGFGYEKVLGRLHLDSGVKEIDWLQPGARAGWENLDTFLEKGLRFFAEKRNDPTEPAISNMSPYFNFGQVSVQAVMLKVKAVKRYHDSIAAFIEEGVVRRELSDNFCFYQPEYDSLAAAAGWAQESLRVHTNDR 379
BLAST of mRNA_M-pyrifera_M_contig7705.18160.1 vs. uniprot
Match: A0A1X7TA16_AMPQE (Photolyase/cryptochrome alpha/beta domain-containing protein n=2 Tax=Amphimedon queenslandica TaxID=400682 RepID=A0A1X7TA16_AMPQE) HSP 1 Score: 176 bits (447), Expect = 9.480e-51 Identity = 87/188 (46.28%), Postives = 130/188 (69.15%), Query Frame = 1 Query: 1 QVDAHNVVPVWTTSDHQETMARTIRPKIHA-RPDLLGDIPELSLNPRDTKLP-EATDWSAARGSLDLDLSVPEVTWLVPGAKAASDNLQSFIESRLKGFADLSNDPNEDVCSHMSAYFNMGQMSAQAAVMRVKA-SRRFPDGVKAFMEQGVVRRELGDNLCFFNANYDNLSGAADWARESLEAHADDQ 555 QVDAHN+VPVW SD QE ART+R KIH P+ L + P ++L+ ++KL ++T+W A+ SL++D++V EV+W PG A L F RLK FA NDPN+D S++S +F+ GQ+ Q A+++VK+ S + + V A++E+ VVRREL DN C++N +YD++SGAA WA+++L+AH D+ Sbjct: 172 QVDAHNIVPVWLASDKQEYAARTLRNKIHKFLPEFLTEFPLVTLHTHNSKLTMKSTNWIKAKESLEVDMTVSEVSWATPGTNAGLKVLDDFCTKRLKFFAAQRNDPNKDSLSNLSPWFHFGQVGVQRAILKVKSYSSKHSESVSAYIEEAVVRRELADNFCYYNPHYDSISGAAQWAQDTLKAHKKDK 359
BLAST of mRNA_M-pyrifera_M_contig7705.18160.1 vs. uniprot
Match: F2U8C8_SALR5 (Deoxyribodipyrimidine photo-lyase n=1 Tax=Salpingoeca rosetta (strain ATCC 50818 / BSB-021) TaxID=946362 RepID=F2U8C8_SALR5) HSP 1 Score: 179 bits (454), Expect = 1.300e-50 Identity = 94/192 (48.96%), Postives = 124/192 (64.58%), Query Frame = 1 Query: 1 QVDAHNVVPVWTTSDHQETMARTIRPKIHARPDL-LGDIPELSLNPRDT----KLPEATDWSAARGSLDLDLSVPEVTWLVPGAKAASDNLQSFIESRLKGFADLSNDPNEDVCSHMSAYFNMGQMSAQAAVMRVKA--SRRFPDGVKAFMEQGVVRRELGDNLCFFNANYDNLSGAADWARESLEAHADDQ 555 QVDAHN+VPVW TS QE ARTIRPKIH D L PEL N +DT +LP D A L++D SV EV W+ PG + ++F R K F +L N+PNEDVCS++S YF+ GQ+SA A V+ +K+ S++ GV+ F+E+ VVRREL DN CF+N YD++ GAA WAR++L+ H D+ Sbjct: 153 QVDAHNIVPVWVTSQKQEYAARTIRPKIHKHLDTYLQPFPELDANDKDTLGDMELPPVFDLEAQFDMLEVDTSVKEVDWIEPGYEQGMAAAEAFGRDRAKKFDELRNNPNEDVCSNLSPYFHFGQISAAAVVLLLKSKYSKKAAKGVQTFIEEAVVRRELSDNFCFYNRRYDSIDGAAVWARDTLDTHRHDK 344
BLAST of mRNA_M-pyrifera_M_contig7705.18160.1 vs. uniprot
Match: A0A7L0KBR7_CHATO (Deoxyribodipyrimidine photo-lyase (Fragment) n=3 Tax=Anseriformes TaxID=8826 RepID=A0A7L0KBR7_CHATO) HSP 1 Score: 176 bits (446), Expect = 3.860e-50 Identity = 90/188 (47.87%), Postives = 121/188 (64.36%), Query Frame = 1 Query: 1 QVDAHNVVPVWTTSDHQETMARTIRPKIHAR-PDLLGDIPELSLNPRDTKLP-EATDWSAARGSLDLDLSVPEVTWLVPGAKAASDNLQSFIESRLKGFADLSNDPNEDVCSHMSAYFNMGQMSAQAAVMRVKASRR-FPDGVKAFMEQGVVRRELGDNLCFFNANYDNLSGAADWARESLEAHADDQ 555 QVDAHN+VP W TS QE ARTIR KIH++ P+ L + P + +P P EA W A SL +D +V EV W PG A LQSFI+ RLK F+ NDPN+ S++S +F+ GQ+S Q A++ V+ R + + V AF+E+ VVRREL DN C++N NYD++ GA DWA+ +LE HA D+ Sbjct: 110 QVDAHNIVPCWVTSAKQEYSARTIRGKIHSQLPEFLTEFPPIIRHPHPPSCPPEAIAWDACYSSLQVDRTVTEVEWATPGTAAGLAVLQSFIDERLKSFSSQRNDPNKAALSNLSPWFHFGQVSTQRAILEVQKHRHMYKESVDAFVEEAVVRRELADNFCYYNENYDSVRGAYDWAQTTLELHAKDK 297
BLAST of mRNA_M-pyrifera_M_contig7705.18160.1 vs. uniprot
Match: A0A1X7U8P6_AMPQE (Deoxyribodipyrimidine photo-lyase n=1 Tax=Amphimedon queenslandica TaxID=400682 RepID=A0A1X7U8P6_AMPQE) HSP 1 Score: 177 bits (448), Expect = 8.220e-50 Identity = 87/188 (46.28%), Postives = 130/188 (69.15%), Query Frame = 1 Query: 1 QVDAHNVVPVWTTSDHQETMARTIRPKIHA-RPDLLGDIPELSLNPRDTKLP-EATDWSAARGSLDLDLSVPEVTWLVPGAKAASDNLQSFIESRLKGFADLSNDPNEDVCSHMSAYFNMGQMSAQAAVMRVKA-SRRFPDGVKAFMEQGVVRRELGDNLCFFNANYDNLSGAADWARESLEAHADDQ 555 QVDAHN+VPVW SD QE ARTIR KIH P+ L + P ++++ ++KL ++T+W AR SL++D++V EV+W PG A L F RLK FA NDPN+D S++S +++ GQ+ Q A+++VK+ S + + V A++E+ VVRREL DN C++N +YD++SGAA WA+++L+AH D+ Sbjct: 172 QVDAHNIVPVWLASDKQEYAARTIRNKIHKFLPEFLTEFPPVTVHTHNSKLTMKSTNWIKARESLEVDMTVSEVSWATPGTNAGLKVLDDFCTKRLKFFAAQRNDPNKDSLSNLSPWYHFGQVGVQRAILKVKSYSSKHSESVSAYIEEAVVRRELADNFCYYNPHYDSISGAAQWAQDTLKAHKKDK 359
BLAST of mRNA_M-pyrifera_M_contig7705.18160.1 vs. uniprot
Match: U3J8D7_ANAPP (Uncharacterized protein n=1 Tax=Anas platyrhynchos platyrhynchos TaxID=8840 RepID=U3J8D7_ANAPP) HSP 1 Score: 172 bits (436), Expect = 9.930e-50 Identity = 90/188 (47.87%), Postives = 118/188 (62.77%), Query Frame = 1 Query: 1 QVDAHNVVPVWTTSDHQETMARTIRPKIHAR-PDLLGDIPELSLNPRDTKLP-EATDWSAARGSLDLDLSVPEVTWLVPGAKAASDNLQSFIESRLKGFADLSNDPNEDVCSHMSAYFNMGQMSAQAAVMRVKASRR-FPDGVKAFMEQGVVRRELGDNLCFFNANYDNLSGAADWARESLEAHADDQ 555 +VDAHN+VP W TS QE ARTIR KIH++ P+ L + P + +P P E W A SL +D SV EV W PG A LQSFI RLK F+ NDPN+ S++S +F+ GQ+S Q A++ V+ RR + V AF+E+ VVRREL DN C++N NYD+L GA DWA+ +L HA D+ Sbjct: 10 KVDAHNIVPCWVTSPKQEYSARTIRGKIHSQLPEFLTEFPPVVRHPHPPSCPAEPIAWDACYSSLQVDRSVAEVEWATPGTSAGLAVLQSFIAERLKSFSTQRNDPNKAALSNLSPWFHFGQVSTQRAILEVQKHRRAHRESVDAFVEEAVVRRELADNFCYYNENYDSLQGAYDWAQTTLRLHAKDK 197
BLAST of mRNA_M-pyrifera_M_contig7705.18160.1 vs. uniprot
Match: A9V1G3_MONBE (Deoxyribodipyrimidine photo-lyase n=1 Tax=Monosiga brevicollis TaxID=81824 RepID=A9V1G3_MONBE) HSP 1 Score: 181 bits (459), Expect = 1.280e-49 Identity = 89/188 (47.34%), Postives = 123/188 (65.43%), Query Frame = 1 Query: 1 QVDAHNVVPVWTTSDHQETMARTIRPKIHARPDL-LGDIPELSLNPRDTKLPEATDWSAARGSLDLDLSVPEVTWLVPGAKAASDNLQSFIESRLKGFADLSNDPNEDVCSHMSAYFNMGQMSAQAAVMRVKASRR--FPDGVKAFMEQGVVRRELGDNLCFFNANYDNLSGAADWARESLEAHADDQ 555 QVDAHN+VPVW S QE ARTIR KIH + D L PEL N +LP+ DW AR SL+++ V EV WL PG + L+ FI RL +AD NDPN D S++S Y++ GQ+S Q V+ +++ +R + +GVKA++E+ VVRREL DN CF+N YD++ GA+ WA+E+L+ H+ D+ Sbjct: 530 QVDAHNIVPVWHASPKQEYAARTIRNKIHQKLDTCLQPFPELESNSNSVQLPDTVDWKKARESLEINWDVKEVDWLKPGYEGGMKMLEEFINERLHRYADDRNDPNLDALSNLSPYYHFGQISVQRVVLELRSKQRGKYAEGVKAYIEEAVVRRELSDNFCFYNHRYDSVEGASAWAQETLDVHSKDK 717
BLAST of mRNA_M-pyrifera_M_contig7705.18160.1 vs. uniprot
Match: A0A6I8NK84_ORNAN (Deoxyribodipyrimidine photo-lyase n=1 Tax=Ornithorhynchus anatinus TaxID=9258 RepID=A0A6I8NK84_ORNAN) HSP 1 Score: 177 bits (448), Expect = 1.820e-49 Identity = 90/188 (47.87%), Postives = 119/188 (63.30%), Query Frame = 1 Query: 1 QVDAHNVVPVWTTSDHQETMARTIRPKIHAR-PDLLGDIPELSLNPRDTKLP-EATDWSAARGSLDLDLSVPEVTWLVPGAKAASDNLQSFIESRLKGFADLSNDPNEDVCSHMSAYFNMGQMSAQAAVMRVKASR-RFPDGVKAFMEQGVVRRELGDNLCFFNANYDNLSGAADWARESLEAHADDQ 555 QVDAHN+VP W SD QE ARTIR KIH R + L + P L +P E DW A R L +D +V EV+W PG A LQ+FI+ RL+ F+ NDPN+ S++S +F+ GQ+S Q A++ V+ R R+PD V +F+E+ +VRREL DN CF+N NYD + GA DWAR +L HA D+ Sbjct: 236 QVDAHNIVPCWVASDKQEYAARTIRRKIHDRLSNFLTEFPPLVRHPHPADFQAEPVDWQACRAGLQVDRTVGEVSWAQPGTAAGLTVLQTFIDQRLRIFSSSRNDPNKAALSNLSPWFHFGQVSVQRAILEVRKQRHRYPDSVASFVEEAMVRRELADNFCFYNENYDKVEGAYDWARTTLRLHAKDK 423 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig7705.18160.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig7705.18160.1 >prot_M-pyrifera_M_contig7705.18160.1 ID=prot_M-pyrifera_M_contig7705.18160.1|Name=mRNA_M-pyrifera_M_contig7705.18160.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=185bp QVDAHNVVPVWTTSDHQETMARTIRPKIHARPDLLGDIPELSLNPRDTKLback to top mRNA from alignment at M-pyrifera_M_contig7705:4557..6263- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig7705.18160.1 ID=mRNA_M-pyrifera_M_contig7705.18160.1|Name=mRNA_M-pyrifera_M_contig7705.18160.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=1707bp|location=Sequence derived from alignment at M-pyrifera_M_contig7705:4557..6263- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig7705:4557..6263- >mRNA_M-pyrifera_M_contig7705.18160.1 ID=mRNA_M-pyrifera_M_contig7705.18160.1|Name=mRNA_M-pyrifera_M_contig7705.18160.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1110bp|location=Sequence derived from alignment at M-pyrifera_M_contig7705:4557..6263- (Macrocystis pyrifera P11B4 male)back to top |