mRNA_M-pyrifera_M_contig7705.18159.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig7705.18159.1 vs. uniprot
Match: D8LQK0_ECTSI (Deoxyribodipyrimidine photo-lyase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQK0_ECTSI) HSP 1 Score: 207 bits (527), Expect = 5.400e-63 Identity = 91/95 (95.79%), Postives = 93/95 (97.89%), Query Frame = 1 Query: 1 NAAQLQLVRDGKMHNFLRMYWAKKILEWSPSPREALERCIFLNDKYELDGRDPNGFTGCAWSVMGIHDMGWKEREVFGKIRYMNYAGCKRKFDVQ 285 NAAQLQLVRDGKMHNFLRMYWAKKILEWSPSP +ALERC+F NDKYELDGRDPNGFTGCAWSVMGIHDMGWKEREVFGKIRYMNYAGCKRKFDVQ Sbjct: 364 NAAQLQLVRDGKMHNFLRMYWAKKILEWSPSPHDALERCLFFNDKYELDGRDPNGFTGCAWSVMGIHDMGWKEREVFGKIRYMNYAGCKRKFDVQ 458
BLAST of mRNA_M-pyrifera_M_contig7705.18159.1 vs. uniprot
Match: A0A813BE07_9DINO (PHR protein (Fragment) n=1 Tax=Symbiodinium necroappetens TaxID=1628268 RepID=A0A813BE07_9DINO) HSP 1 Score: 184 bits (467), Expect = 2.220e-57 Identity = 77/90 (85.56%), Postives = 86/90 (95.56%), Query Frame = 1 Query: 1 NAAQLQLVRDGKMHNFLRMYWAKKILEWSPSPREALERCIFLNDKYELDGRDPNGFTGCAWSVMGIHDMGWKEREVFGKIRYMNYAGCKR 270 NAAQLQ+VR+GKMH FLRMYWAKKILEWSPSP+EALERCI+LND+YELDGRDPNG+ GC WS+ G+HDMGWKEREVFGKIR+MNYAGCKR Sbjct: 108 NAAQLQMVREGKMHGFLRMYWAKKILEWSPSPKEALERCIWLNDRYELDGRDPNGYVGCMWSICGVHDMGWKEREVFGKIRFMNYAGCKR 197
BLAST of mRNA_M-pyrifera_M_contig7705.18159.1 vs. uniprot
Match: A0A812HK27_9DINO (Deoxyribodipyrimidine photo-lyase n=1 Tax=Symbiodinium natans TaxID=878477 RepID=A0A812HK27_9DINO) HSP 1 Score: 191 bits (485), Expect = 8.600e-57 Identity = 81/94 (86.17%), Postives = 90/94 (95.74%), Query Frame = 1 Query: 1 NAAQLQLVRDGKMHNFLRMYWAKKILEWSPSPREALERCIFLNDKYELDGRDPNGFTGCAWSVMGIHDMGWKEREVFGKIRYMNYAGCKRKFDV 282 NAAQLQ+VR+GKMH FLRMYWAKKILEWSPSP+EAL+RCI+LND+YELDGRDPNG+ GC WSV G+HDMGWKEREVFGKIR+MNYAGCKRKFDV Sbjct: 372 NAAQLQMVREGKMHGFLRMYWAKKILEWSPSPQEALDRCIWLNDRYELDGRDPNGYVGCMWSVCGVHDMGWKEREVFGKIRFMNYAGCKRKFDV 465
BLAST of mRNA_M-pyrifera_M_contig7705.18159.1 vs. uniprot
Match: A0A812XDP1_9DINO (Deoxyribodipyrimidine photo-lyase n=1 Tax=Symbiodinium sp. CCMP2592 TaxID=631055 RepID=A0A812XDP1_9DINO) HSP 1 Score: 192 bits (488), Expect = 5.650e-55 Identity = 81/94 (86.17%), Postives = 90/94 (95.74%), Query Frame = 1 Query: 1 NAAQLQLVRDGKMHNFLRMYWAKKILEWSPSPREALERCIFLNDKYELDGRDPNGFTGCAWSVMGIHDMGWKEREVFGKIRYMNYAGCKRKFDV 282 NAAQLQ+VR+GKMH FLRMYWAKKILEWSPSP+EALERCI+LND+YELDGRDPNG+ GC WS+ G+HDMGWKEREVFGKIR+MNYAGCKRKFDV Sbjct: 881 NAAQLQMVREGKMHGFLRMYWAKKILEWSPSPKEALERCIWLNDRYELDGRDPNGYVGCMWSICGVHDMGWKEREVFGKIRFMNYAGCKRKFDV 974
BLAST of mRNA_M-pyrifera_M_contig7705.18159.1 vs. uniprot
Match: A0A7S3HNA7_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HNA7_9STRA) HSP 1 Score: 176 bits (447), Expect = 6.760e-55 Identity = 74/95 (77.89%), Postives = 83/95 (87.37%), Query Frame = 1 Query: 1 NAAQLQLVRDGKMHNFLRMYWAKKILEWSPSPREALERCIFLNDKYELDGRDPNGFTGCAWSVMGIHDMGWKEREVFGKIRYMNYAGCKRKFDVQ 285 NAAQ+Q+V++GKMH FLRMYWAKKILEWSPSP EAL R I+LNDKY LDGRDPNG+ GC WS+ GIHD GW ER +FGKIR+MNY GCKRKFDVQ Sbjct: 26 NAAQIQMVKEGKMHGFLRMYWAKKILEWSPSPEEALRRAIYLNDKYSLDGRDPNGYVGCMWSIGGIHDQGWGERPIFGKIRFMNYQGCKRKFDVQ 120
BLAST of mRNA_M-pyrifera_M_contig7705.18159.1 vs. uniprot
Match: UPI0009A284DF (deoxyribodipyrimidine photo-lyase-like n=2 Tax=Rhincodon typus TaxID=259920 RepID=UPI0009A284DF) HSP 1 Score: 172 bits (437), Expect = 8.170e-54 Identity = 72/94 (76.60%), Postives = 82/94 (87.23%), Query Frame = 1 Query: 1 NAAQLQLVRDGKMHNFLRMYWAKKILEWSPSPREALERCIFLNDKYELDGRDPNGFTGCAWSVMGIHDMGWKEREVFGKIRYMNYAGCKRKFDV 282 NAAQLQ++ +GKMH FLRMYWAKKILEW+ SP EAL+ I+LND+YELDGRDPNG+ GC WS+ GIHD GWKER +FGKIRYMNY GCKRKFDV Sbjct: 27 NAAQLQMIHEGKMHGFLRMYWAKKILEWTASPEEALQFSIYLNDRYELDGRDPNGYVGCMWSICGIHDQGWKERPIFGKIRYMNYNGCKRKFDV 120
BLAST of mRNA_M-pyrifera_M_contig7705.18159.1 vs. uniprot
Match: U3J8D7_ANAPP (Uncharacterized protein n=1 Tax=Anas platyrhynchos platyrhynchos TaxID=8840 RepID=U3J8D7_ANAPP) HSP 1 Score: 177 bits (450), Expect = 2.340e-53 Identity = 75/94 (79.79%), Postives = 85/94 (90.43%), Query Frame = 1 Query: 1 NAAQLQLVRDGKMHNFLRMYWAKKILEWSPSPREALERCIFLNDKYELDGRDPNGFTGCAWSVMGIHDMGWKEREVFGKIRYMNYAGCKRKFDV 282 NAAQLQ+VR+GKMH FLRMYWAKKILEW+ SP EAL+ I+LND+YELDGRDPNG+ GC WS+ GIHD GWKER+VFGKIRYMNY+GCKRKFDV Sbjct: 218 NAAQLQMVREGKMHGFLRMYWAKKILEWTRSPEEALQFAIYLNDRYELDGRDPNGYVGCLWSICGIHDQGWKERDVFGKIRYMNYSGCKRKFDV 311
BLAST of mRNA_M-pyrifera_M_contig7705.18159.1 vs. uniprot
Match: A0A224XXV6_9HEMI (Putative deoxyribodipyrimidine photolyase/cryptochrome (Fragment) n=2 Tax=Triatominae TaxID=70999 RepID=A0A224XXV6_9HEMI) HSP 1 Score: 172 bits (436), Expect = 4.950e-53 Identity = 71/94 (75.53%), Postives = 82/94 (87.23%), Query Frame = 1 Query: 1 NAAQLQLVRDGKMHNFLRMYWAKKILEWSPSPREALERCIFLNDKYELDGRDPNGFTGCAWSVMGIHDMGWKEREVFGKIRYMNYAGCKRKFDV 282 N+AQ+QLV++GKMH FLRMYWAKKILEW+ SP EAL ++LND+Y LDGRDPNGF GC WS+ GIHD GW+ERE+FGKIRYMNY GCKRKFDV Sbjct: 72 NSAQIQLVKEGKMHGFLRMYWAKKILEWTSSPEEALRIALYLNDRYSLDGRDPNGFVGCMWSICGIHDQGWREREIFGKIRYMNYEGCKRKFDV 165
BLAST of mRNA_M-pyrifera_M_contig7705.18159.1 vs. uniprot
Match: A0A7R9BBX5_TIMSH (Hypothetical protein n=1 Tax=Timema shepardi TaxID=629360 RepID=A0A7R9BBX5_TIMSH) HSP 1 Score: 171 bits (432), Expect = 5.030e-53 Identity = 70/94 (74.47%), Postives = 81/94 (86.17%), Query Frame = 1 Query: 1 NAAQLQLVRDGKMHNFLRMYWAKKILEWSPSPREALERCIFLNDKYELDGRDPNGFTGCAWSVMGIHDMGWKEREVFGKIRYMNYAGCKRKFDV 282 N+AQLQLV+DGKMH FLRMYWAKKILEW+ +P AL I+LND+Y LDGRDPNGF GC WS+ GIHD GW+ER++FGKIRYMNY GCKRKFD+ Sbjct: 27 NSAQLQLVKDGKMHGFLRMYWAKKILEWTDTPERALADAIYLNDRYSLDGRDPNGFVGCMWSICGIHDQGWRERDIFGKIRYMNYEGCKRKFDI 120
BLAST of mRNA_M-pyrifera_M_contig7705.18159.1 vs. uniprot
Match: A0A6T7IZ29_9EUKA (Hypothetical protein n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A6T7IZ29_9EUKA) HSP 1 Score: 176 bits (447), Expect = 5.360e-53 Identity = 75/94 (79.79%), Postives = 81/94 (86.17%), Query Frame = 1 Query: 1 NAAQLQLVRDGKMHNFLRMYWAKKILEWSPSPREALERCIFLNDKYELDGRDPNGFTGCAWSVMGIHDMGWKEREVFGKIRYMNYAGCKRKFDV 282 NAAQ Q+ GKMH F+RMYWAKKILEWS SP EAL IFLNDKY LDGRDPNG+ GC W++MG+HDMGWKEREVFGKIRYMNYAGCKRKFDV Sbjct: 182 NAAQRQMAATGKMHGFMRMYWAKKILEWSASPEEALATAIFLNDKYSLDGRDPNGYVGCGWAIMGVHDMGWKEREVFGKIRYMNYAGCKRKFDV 275 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig7705.18159.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig7705.18159.1 >prot_M-pyrifera_M_contig7705.18159.1 ID=prot_M-pyrifera_M_contig7705.18159.1|Name=mRNA_M-pyrifera_M_contig7705.18159.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=95bp NAAQLQLVRDGKMHNFLRMYWAKKILEWSPSPREALERCIFLNDKYELDGback to top mRNA from alignment at M-pyrifera_M_contig7705:2307..4496- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig7705.18159.1 ID=mRNA_M-pyrifera_M_contig7705.18159.1|Name=mRNA_M-pyrifera_M_contig7705.18159.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=2190bp|location=Sequence derived from alignment at M-pyrifera_M_contig7705:2307..4496- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig7705:2307..4496- >mRNA_M-pyrifera_M_contig7705.18159.1 ID=mRNA_M-pyrifera_M_contig7705.18159.1|Name=mRNA_M-pyrifera_M_contig7705.18159.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=570bp|location=Sequence derived from alignment at M-pyrifera_M_contig7705:2307..4496- (Macrocystis pyrifera P11B4 male)back to top |