mRNA_M-pyrifera_M_contig76976.18142.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig76976.18142.1 vs. uniprot
Match: A0A517X664_9PLAN (Recombination protein F n=1 Tax=Gimesia maris TaxID=122 RepID=A0A517X664_9PLAN) HSP 1 Score: 399 bits (1025), Expect = 7.410e-126 Identity = 200/339 (59.00%), Postives = 266/339 (78.47%), Query Frame = 1 Query: 1 EYVVENSVECPLCEQDLSSKKQIFSELLKLKPLSVQDHIKKNFEDLENAIINQLKNEKALLQEVSGSVADCIREDWATFKKDYFNGILLEIVNRYDNHLEAVLEKIIITPFDSSIDLLGDHSEKFADQFVNLKELILDVRRSLSIVGAIHDNSEQLKKDLNRMIILQNENGQESLRQILKLGDDSSKKLNLLEPLETDYKSVKKQMDVILNQLNEIEIKQKIAKSSESIKKLSDSVRKLVISNVQSVEDEMKCLYAKLYHEDPLGLDSITPGHAANPKVKSQFNVYLRADKSLVPVLPFSNAGRIRALCLSFVFALIEKARGSIGFLILDDPIVSLDDE 1017 ++V EN CPLC+ DL+ +FSELL LKPL+VQDHIK F DLEN + ++L++ ++ LQ + SV +CI+ DW FK F GILLEI NRYDN +EA+ ++I F+S IDLLG+HS++FA++F+ LKELIL++RR L+ V IH+N++ L LN+++I N+N + SLRQILK GDDS+ +LN+LEPLE + S+KKQ++ L +LNEI +++ A+ + +KKLSD+VRK+VI NV+SVE EMK LY+ LYH+D L LDS+TPGHA NP VK+QFN+YLRAD+ L+PVLPFSNAG+IRALCLSF+FALIE++ GSIGFLILDDPIVSLDDE Sbjct: 466 DFVEENDTACPLCDHDLNENPTLFSELLSLKPLAVQDHIKTRFIDLENELKSKLEDHQSFLQGTTISVDECIKNDWGVFKVQSFGGILLEIANRYDNSVEAIFKQIKRLAFNSDIDLLGEHSDQFANEFIGLKELILNIRRYLNFVETIHENADLLFNSLNQIVITGNKNSETSLRQILKQGDDSNNRLNVLEPLEVNLLSIKKQIETYLKKLNEINLRKNKAEDTGCLKKLSDTVRKMVIDNVKSVEGEMKKLYSNLYHDDILELDSLTPGHAKNPNVKTQFNIYLRADQKLIPVLPFSNAGKIRALCLSFIFALIERSSGSIGFLILDDPIVSLDDE 804
BLAST of mRNA_M-pyrifera_M_contig76976.18142.1 vs. uniprot
Match: A0A2S8GQA1_9BACT (Uncharacterized protein n=2 Tax=Blastopirellula marina TaxID=124 RepID=A0A2S8GQA1_9BACT) HSP 1 Score: 175 bits (444), Expect = 3.340e-45 Identity = 111/341 (32.55%), Postives = 180/341 (52.79%), Query Frame = 1 Query: 1 EYVVENSVECPLCEQDLSSKKQIFSELLKLKPLSVQDHIKKNFEDLENAIINQLKN--EKALLQEVSGSVADCIREDWATFKKDYFNGILLEIVNRYDNHLEAVLEKIIITPFDSSIDLLGDHSEKFADQFVNLKELILDVRRSLSIVGAIHDNSEQLKKDLNRMIILQNENGQESLRQILKLGDDSSKKLNLLEPLETDYKSVKKQMDVILNQLNEIEIKQKIAKSSESIKKLSDSVRKLVISNVQSVEDEMKCLYAKLYHEDPLGLDSITPGHAANPKVKSQFNVYLRADKSLVPVLPFSNAGRIRALCLSFVFALIEKARGSIGFLILDDPIVSLDDE 1017 E + +S ECPLC+QD+ KQ+ + L +L+PL+V +KK+ EDL ++ ++L + S + + DWA FK G+L I ++D+ + + ++ L + + F +F +L++ R +S+ + E+L + LN ++ E +ESL + G D+S L + + +++ ++ N IE+ IA ++E +K L + VR SV+ +K LY KLY + L +D +TPGHAAN +K QFNVY+R+ VP+ PFSNAGR+RA+ LSF FALIE+ + + DDP +SLDDE Sbjct: 464 EQYLADSEECPLCDQDIDHDKQLQANLSRLRPLAVNPILKKSLEDLSRSLQDRLSGIVSPEYQKRSDTSNVNSVTSDWARFKTITCPGLLQNIATKWDDSISRLASELFPLLEQDDPTLTESYDDDFKKEFTDLEQAFARSRSFVSLARQAAHSRERLAQKLNDLLQAP-ELSKESLLLAIMSGKDTSNILKTIGACISTTSELQELTTTRISLQNRIELLNTIANATEELKPLENLVRHQTRELFASVDPRVKSLYQKLYDNELLQVDMVTPGHAANQDLKDQFNVYVRSGNERVPMGPFSNAGRLRAIALSFAFALIEQNSARLKLCVFDDPALSLDDE 803
BLAST of mRNA_M-pyrifera_M_contig76976.18142.1 vs. uniprot
Match: A0A353P3F2_9BACT (Uncharacterized protein n=2 Tax=Planctomycetes TaxID=203682 RepID=A0A353P3F2_9BACT) HSP 1 Score: 155 bits (391), Expect = 3.580e-38 Identity = 113/348 (32.47%), Postives = 193/348 (55.46%), Query Frame = 1 Query: 4 YVVENSVECPLCEQDLSSKKQIFSELLKLKPLSVQDHIKKNFEDLENAIINQLKNEKALLQ--EVSGSVADCIREDWATFKKDYFNGILLEIVNRYDNHLEAVLEKII---ITPFDSSIDLLGDHSEKFADQFVNLKELILDVRRSLSIVGAIHDNSEQLKKDLNRMIILQNENGQESLRQILKLG----DDSSKKLNLLEPLETDYKSVKKQMDVILNQLNEIEIKQKIAKSSESIKKLSDSVRKLVISNVQS-VEDEMKCLYAKLYHEDPLGLDSITPGHAANPKVKSQFNVYLRADKSLVPVLPFSNAGRIRALCLSFVFALIEKARGSIGFLILDDPIVSLDDE 1017 Y+ E+++ CP+C Q L + +I EL+ LK S ++++ K +D + +L + Q E S+ I EDW+ FKK + +L +I R+D ++ + ++I+ PF D S + QFV E I + +++ I+ N + ++ + + I++ NE G+ + ++IL D S LN+ + T YK ++K ++ L+ I + +A S++ IK + ++R+ V + V + ++ K Y LY +D + +T GHAANP +K++ N+YL+A VP+ P+SNAGR+RAL LSF FALIEK++ S+ +ILDDP +SLDDE Sbjct: 460 YLAEDNINCPVCTQLLDNVPEIKRELICLKVKSAKEYLHKQLDDFWRYLTGELNKIVSASQRDESRKSLMFRINEDWSNFKKIHCKELLKQIAERHDLSIDILTKEILQENYIPFKIPHSC-EDSSNLYLVQFV---EEINKAKNYINLCKNINSNKKDIQIKI-QSILIGNE-GKTAFKEILARAKTNIDSLSSLLNIQKEARTLYKGIEKAEEIKLH----IRGLRSLADSADLIKVIKINIREEVKAIVNGKLGEKTKEYYKNLYDKDVFEFNQLTTGHAANPDIKTEINIYLKAGDYQVPMGPYSNAGRMRALLLSFAFALIEKSKDSLDMIILDDPALSLDDE 797
BLAST of mRNA_M-pyrifera_M_contig76976.18142.1 vs. uniprot
Match: A0A5C5XGC6_9PLAN (Recombination protein F n=2 Tax=Rubinisphaera italica TaxID=2527969 RepID=A0A5C5XGC6_9PLAN) HSP 1 Score: 104 bits (260), Expect = 5.380e-21 Identity = 95/347 (27.38%), Postives = 162/347 (46.69%), Query Frame = 1 Query: 1 EYVVENSVECPLCEQDLSSKKQIFSELLKLKPLSVQDHIKKNFEDLENAIINQL-KNEKALLQEV-SGSVADCIREDWATFKKDYFNGILLEIVNRYDNHLEAVLEKIIITPFDSSIDLLGDHSEKFADQFVNLKELILDVRRSLSIVGAIHDNSEQLKKDLNRMIILQNENGQESLRQILKLGDDSSKKLNLLEP----LETDYKSVKKQMDVILNQLNEIEIKQKIAKSSESIKKLSDSVRKLVISNVQSVEDEMKCLYAKLYHEDPLGLD--SITPGHAANPKVKSQFNVYLRADKSLVPVLPFSNAGRIRALCLSFVFALIEKARGSIGFLILDDPIVSLDDE 1017 EY + CP+C +++ K + EL++LK +++N E ++ +L K A L+ V S S A + DW KK L + +YD + A++ +I I P DS I L D E+F + ++ SL ++ E + LNR I +N +SL + L G + + + L+ L T YK K + +L++LN++ +K + + K SD+ S + ++ + LY E GL+ S+ G N ++++ YL + + F+N G RA+ LS FAL+E+ +GF+I+DDP+ SLDD+ Sbjct: 481 EYFLAEENSCPVCYEEIKDDK-LRKELIELK--KSDQELRENLESFFRSLKAELDKLVPASLRSVCSQSPAARLSADWQKLKKVTLPAALKPVYEKYDADVTAIISEITIAPVDSPIILPADCEERFQQTAEDFHSVVDAANESLRLLDWSSREYESILSRLNRSIKAENSQEGKSLYETLAAGREKADAIKPLKQTLAVLRTAYKDRDK-LQKLLDELNQLSQLEKPLAQLKVLTKYSDNEINTTFSRIS---EQTMAYWKLLYPETGTGLEPHSLAIGKKKNERIQA----YLANEHCIALEAFFANTGLQRAVALSLFFALLEEHPAGLGFVIMDDPMTSLDDD 816
BLAST of mRNA_M-pyrifera_M_contig76976.18142.1 vs. uniprot
Match: A6C413_9PLAN (AAA_23 domain-containing protein n=2 Tax=Gimesia maris TaxID=122 RepID=A6C413_9PLAN) HSP 1 Score: 85.9 bits (211), Expect = 1.230e-14 Identity = 84/344 (24.42%), Postives = 157/344 (45.64%), Query Frame = 1 Query: 4 YVVENSVECPLCEQDLSSKKQIFSELLKLKP--LSVQDHIKKNFEDLENAIINQLKNEKALLQEVSGSVADCIREDWATFKKDYFNGILLEIVNRYDNHLEAVLEKIIITPFDSSIDLLGDHSE-KFADQFVNLKELILDVRRSLSIVGAIHDNSEQLKKDLNRMIILQNENGQESLRQILKLGDDSSKKLNLLEPLETDYKSVKKQMDVILNQLNEIEIKQKIAKSSESIKKLSDSVRKLVISNVQSVEDEMKCLYAKLYHEDPLGLD----SITPGHAANPKVKSQFNVYLRADKSLVPVLPFSNAGRIRALCLSFVFALIEKARGSIGFLILDDPIVSLDD 1014 Y NS CP+CEQ +SS + EL +LK ++ IK F +L + + + + L S + + DW + +V +++ H+E + ++ I + I +L D E +FA+ + I D+R S++ + N E K + +I +E ESL + +G +++++ L+ + + K+ I + N +++ +++ +++K + V ++ + ++ +Y E GL ++ GHA KS + + VP F NAG R++ L+F FAL++ IGF I+DDPI+SLDD Sbjct: 475 YYDPNSEICPVCEQSISSS-PVKDELERLKSHDAELKKEIKSFFRELCDELDAIIPTSVSNL--AKSSPVERLNNDWQKLAESSLPSAFSPLVQKFNPHIEGMASQLQIEK-NEPIQILPDGVEPEFAEYASAFIQKIEDIRTSIAYLDWSSINLEGTKTSIQSLITSSSEEHTESLLNNISVGKKTAREIKPLKDILNILRCAYKKRVEISEKENALKLLEELKSPLDTLKNIKKFAENEVEITFGEIQSKTIDIWKIMYPESSSGLTPAKLTVGKGHA-----KSVTAFLTKNEAYEVPGQFFGNAGLQRSVALAFYFALLDNHPKGIGFSIMDDPILSLDD 809
BLAST of mRNA_M-pyrifera_M_contig76976.18142.1 vs. uniprot
Match: UPI0012F8EE60 (AAA family ATPase n=1 Tax=Zavarzinella formosa TaxID=360055 RepID=UPI0012F8EE60) HSP 1 Score: 71.2 bits (173), Expect = 8.160e-10 Identity = 85/340 (25.00%), Postives = 155/340 (45.59%), Query Frame = 1 Query: 28 CPLCEQDLSSKKQIFSELLKLK--PLSVQDHIKKNFEDLENAIINQLKNEKALLQEVSGSVADCIREDWATFKKDYFNGILLEIVNRYDNHLEAVLEKIIITPFDSSIDLL--GDHSEKFADQFVNLKELILDVRRSLSI----VGAIHDNSEQLKKDLNRMIILQNENGQESLRQILKLGDDSSKKLNLLEPLETDYKSVKKQMDVILNQLNEIEIKQKIAKSSESIKKLSDSVRKLVISNVQSVEDEMKCLYAKLY-HEDPLGLDSITPGHAANPKVKSQ-FNVYLRADKSLVPVLPFSNAGRIRALCLSFVFALIEKARGSIGFLILDDPIVSLDDE 1017 CPLC+QD+++ + ++L +LK P ++ +K+ F +L + + + L E + S C+REDW+ ++ +L + ++ + A+ +++ P D + D L D FA L I + RR +++ +HD +L I+ E SL IL G S+ + L + K+ +++ + ++I + +K++ + ++ D+ KLY H +P +TP K + + YL VP +NAG +RAL LSF FAL+E+ G + F+++DDPI+SLDD+ Sbjct: 476 CPLCDQDITAG-GLPAQLSELKNAPADLRAGLKEFFRNLYDDLQQAVPPAVVRLSEQAPS--RCLREDWSAIGRN-LGPLLTKFHAEFEPLVLAIADEL--PPIDFTDDNLIPPDADAAFAAAASPLMLAIRNARRGIAVCRWAASHLHDVLTRLIA-----ILAAPETEPPSLLAILARGKSSAADVGPLAAVRDGLKAAAAAATSLISDTTAVATLEEIQEQLTPLKEIGKWAGAELGRIFAAIHDKTIENCRKLYPHANP----ELTPSRLHMNKGRDRTVEAYLGTVAFDVPGQHIANAGMLRALALSFYFALLERHPGGLAFVVMDDPILSLDDD 800 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig76976.18142.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 6
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig76976.18142.1 >prot_M-pyrifera_M_contig76976.18142.1 ID=prot_M-pyrifera_M_contig76976.18142.1|Name=mRNA_M-pyrifera_M_contig76976.18142.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=339bp EYVVENSVECPLCEQDLSSKKQIFSELLKLKPLSVQDHIKKNFEDLENAIback to top mRNA from alignment at M-pyrifera_M_contig76976:1..1017- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig76976.18142.1 ID=mRNA_M-pyrifera_M_contig76976.18142.1|Name=mRNA_M-pyrifera_M_contig76976.18142.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=1017bp|location=Sequence derived from alignment at M-pyrifera_M_contig76976:1..1017- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig76976:1..1017- >mRNA_M-pyrifera_M_contig76976.18142.1 ID=mRNA_M-pyrifera_M_contig76976.18142.1|Name=mRNA_M-pyrifera_M_contig76976.18142.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=2034bp|location=Sequence derived from alignment at M-pyrifera_M_contig76976:1..1017- (Macrocystis pyrifera P11B4 male)back to top |