mRNA_M-pyrifera_M_contig76972.18141.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig76972.18141.1 vs. uniprot
Match: UPI0003F06B02 (LOW QUALITY PROTEIN: integrator complex subunit 1-like n=1 Tax=Saccoglossus kowalevskii TaxID=10224 RepID=UPI0003F06B02) HSP 1 Score: 127 bits (318), Expect = 4.330e-29 Identity = 93/292 (31.85%), Postives = 150/292 (51.37%), Query Frame = 1 Query: 10 YVGIVRKVLFMDRSHVYAALAAVNNETY----EKQLLRALFHEVPIQENTATRIVLITIS-SLPLQPKEALDILHSLLNTKYPSLLVAGSNQALRFNNPQLADALLKLSIYQPPIAPNMTKLLE-QANELAIAQWFWQTAVILLIIGAFNPSTVGAYLWKQVPSIRYLMELCLTHTFSDPPVPVTAEEALAEGAAQRDKILFVEQQQTLLQARSDIGKLAVLNAQGGEAPIVTVENSALLSSLMLFPKDPTRLSPVNV---PPSAVLKNVEDLTREFHLGDFLSRCRSPDFL 858 YV ++KVLF++++ Y N + + E+ LL L EVP+QE+T R+++I +S +LPL P EALD+ L+ K ++L L+ QL DA+L L Y P N+T QA +LAI+ +W+ ++LL++ AFNP +G W++ P ++ ME+C+T+ F+ PP + +E E R+ L ++Q +L+ S + A ++ +S LL+ L T + P V PP +L+ + L +G L R RSPDFL Sbjct: 608 YVHCLQKVLFLEQNETY-----YNKDNWPPESERSLLLRLTAEVPVQEDTLMRVLVIGLSKNLPLTPAEALDMADKLV--KRAAVLYTPDFSVLKVERCQLMDAVLNLCGYHHP--ENITLPAGYQAPQLAISNLYWKGWLLLLLVSAFNPKNIGHKSWEEYPMLKCFMEMCMTNNFNFPPSTMAPDERTTEELKARELQLAQIEKQDILEFESHL-------AAASTRMLIDESSSLLLAQL-------TSMDPHGVARKPPPHILEQLRSLNNTIKMGTLLCRSRSPDFL 876
BLAST of mRNA_M-pyrifera_M_contig76972.18141.1 vs. uniprot
Match: UPI001BB1E49D (integrator complex subunit 1-like n=1 Tax=Lytechinus variegatus TaxID=7654 RepID=UPI001BB1E49D) HSP 1 Score: 122 bits (305), Expect = 2.250e-27 Identity = 85/284 (29.93%), Postives = 146/284 (51.41%), Query Frame = 1 Query: 19 IVRKVLFMDRSHVYAALAAVNNETYEKQLLRALFHEVPIQENTATRIVLITIS-SLPLQPKEALDILHSLLNTKYPSLLVAGSNQALRFNNPQLADALLKLSIYQPPIAPNMTKLLEQANE---LAIAQWFWQTAVILLIIGAFNPSTVGAYLWKQVPSIRYLMELCLTHTFSDPPVPVTAEEALAEGAAQRDKILFVEQQQTLLQARSDIGKLAVLNAQGGEAPIVTVENSALLSSLMLFPKDPTRLSPVNVPPSAVLKNVEDLTREFHLGDFLSRCRSPDFL 858 +++K++F+D Y + ET ++ LL +L EVP+QE+T R++++ + ++PL EALD++ L+ K ++L + Q L+ L D +L +Y P N+T L Q + LAIA ++W+ ++LLI+ AFNPS +G W P +RY ME+ +T+ F P +E AE + + ++Q +L+ + + ++ ++ NS LL+ LM + PV PP +L ++ + HLG L R R+PDFL Sbjct: 595 VIQKLVFLDTHEGYCSKDNWPPET-DRGLLLSLLSEVPVQEDTLMRLLIMGLERTIPLAAGEALDLVDKLV--KRAAVLQSEDFQVLKIERTTLIDVVLNSCVYHHP--ENIT--LPQGYQVPSLAIANFYWKGWILLLILAAFNPSNIGRVGWDNYPILRYFMEMVMTNNFKFPMATRAKDEKTAEELKNMELQVAQLEKQAILEFENHLARVQIMEG-----------NSLLLTQLMRMEPN----GPVRRPPIQILDQLQHYNKVLHLGHMLCRSRNPDFL 856
BLAST of mRNA_M-pyrifera_M_contig76972.18141.1 vs. uniprot
Match: UPI0018D92D03 (integrator complex subunit 1-like n=2 Tax=Patiria miniata TaxID=46514 RepID=UPI0018D92D03) HSP 1 Score: 120 bits (300), Expect = 1.030e-26 Identity = 84/280 (30.00%), Postives = 147/280 (52.50%), Query Frame = 1 Query: 22 VRKVLFMDRSHVYAALAAVNNETYEKQLLRALFHEVPIQENTATRIVLITIS-SLPLQPKEALDILHSLLNTKYPSLLVAGSNQALRFNNPQLADALLKLSIYQPPIAPNMTKLLEQANELAIAQWFWQTAVILLIIGAFNPSTVGAYLWKQVPSIRYLMELCLTHTFSDPPVPVTAEEALAEGAAQRDKILFVEQQQTLLQARSDIGKLAVLNAQGGEAPIVTVENSALLSSLMLFPKDPTRLSPVNVPPSAVLKNVEDLTREFHLGDFLSRCRSPDFL 858 ++KVLFM+ S Y + E+ ++ LL +L EVP+QE+T R++++ +S LPL + L++ L+ K ++L A L+ QL DA+L L Y P + + + LAI+ +W+ ++L++I AFNP+ +G W++ P +R ME+ +T+ F PP +E E R+ + ++Q +L+ + + ++A+ A NS LLS ++ DP ++ PP+ VL+ ++ + +LG L R RSPDFL Sbjct: 598 LQKVLFMEPSESYCSKDNWPPES-DRSLLLSLLSEVPVQEDTLMRVLVMGLSRELPLTAADGLELADKLV--KRAAVLYAEDFPVLKVERIQLIDAVLNLCAYHHPENIQLPQGYSPPS-LAISNLYWKGWILLVVITAFNPTNIGLSAWERYPMLRCFMEMVMTNNFKYPPPTAAPDERSQEEVRTRELQVIALEKQEILEFENHLARVAITEA-----------NSLLLSQVIRM--DPNGIA--RRPPAQVLEQLQHFNKVLNLGHMLCRSRSPDFL 858
BLAST of mRNA_M-pyrifera_M_contig76972.18141.1 vs. uniprot
Match: UPI001455220A (integrator complex subunit 1-like n=1 Tax=Asterias rubens TaxID=7604 RepID=UPI001455220A) HSP 1 Score: 120 bits (300), Expect = 1.030e-26 Identity = 84/280 (30.00%), Postives = 145/280 (51.79%), Query Frame = 1 Query: 22 VRKVLFMDRSHVYAALAAVNNETYEKQLLRALFHEVPIQENTATRIVLITIS-SLPLQPKEALDILHSLLNTKYPSLLVAGSNQALRFNNPQLADALLKLSIYQPPIAPNMTKLLEQANELAIAQWFWQTAVILLIIGAFNPSTVGAYLWKQVPSIRYLMELCLTHTFSDPPVPVTAEEALAEGAAQRDKILFVEQQQTLLQARSDIGKLAVLNAQGGEAPIVTVENSALLSSLMLFPKDPTRLSPVNVPPSAVLKNVEDLTREFHLGDFLSRCRSPDFL 858 ++KV+F++ S Y + E ++ LL +L EVP+QE+T R++++ +S L L + L++ L+ K ++L A L+ QL DA+L L Y P + + N LAI+ +W+ ++L++I AFNP+ +G W+Q P +R ME+ +T+ F PP +E E R+ + ++Q +L+ + + ++A+ T NS LLS ++ DP ++ PPS VL +++ + +LG L R RSPDFL Sbjct: 620 LQKVVFLEPSESYCSKDNWPPEA-DRSLLLSLLSEVPVQEDTLMRVLVMGLSRELSLSAGDGLELADKLV--KRAAVLYADDFPVLKVERVQLVDAVLNLCSYHHPENIQLPQGYSPPN-LAISNLYWKAWILLVVITAFNPTNIGLTAWEQYPMLRCFMEMVMTNNFKYPPPTAAPDERSQEETRARELQVIALEKQEILEFENHLARVAI-----------TESNSLLLSQVIRM--DPNGIA--RRPPSHVLDQLKEFNKVLNLGHMLCRSRSPDFL 880
BLAST of mRNA_M-pyrifera_M_contig76972.18141.1 vs. uniprot
Match: A0A6V7JV17_9HYME (DUF3677 domain-containing protein (Fragment) n=1 Tax=Bracon brevicornis TaxID=1563983 RepID=A0A6V7JV17_9HYME) HSP 1 Score: 119 bits (298), Expect = 1.880e-26 Identity = 86/282 (30.50%), Postives = 141/282 (50.00%), Query Frame = 1 Query: 16 GIVRKVLFMDRSHVYAALAAVNNETYEKQLLRALFHEVPIQENTATRIVLITISS-LPLQPKEALDILHSLLNTKYPSLLVAGSNQALRFNNPQLADALLKLSIYQPPIAPNMTKLLEQANELAIAQWFWQTAVILLIIGAFNPSTVGAYLWKQVPSIRYLMELCLTHTFSDPPVPVTAEEALAEGAAQRDKILFVEQQQTLLQARSDIGKLAVLNAQGGEAPIVTVENSALLSSLMLFPKDPTRLSPVNVPPSAVLKNVEDLTREFHLGDFLSRCRSPDFL 858 G V+K++F+D Y + ET LR + +VP+QE T R++L+ S + L P E +++ L+ K + + L+ ++ + + L YQPP N+ + LAI+ +W+ ++LLI+GA NPST+GA W++ P R ME+C+T+ F PP + E + + A+ +I +E+Q+ L + V A G ++ NS LLS L+ DPT + PP A+++ ++ L LG L R R PDFL Sbjct: 535 GAVQKIMFLDTLEHYCKIDNWPPETDRVLFLRTV-SDVPLQETTLVRLLLMGFSKEMGLAPSEVMEVADQLV--KKAAANTTETVPGLQITKVEIIELIFNLVTYQPPSTINIPAGYVPPS-LAISALYWKGWIMLLILGAHNPSTIGAIGWQKYPIWRMFMEMCITNHFQYPPPTMALPEVIEQEKARELQIEALERQEIL--------EYEVHLAAGSTRTPISETNSLLLSQLITM--DPTGMP--RRPPPAIIEQLQSLNTSLRLGHLLCRSRKPDFL 800
BLAST of mRNA_M-pyrifera_M_contig76972.18141.1 vs. uniprot
Match: A0A7M7NQM3_STRPU (DUF3677 domain-containing protein n=2 Tax=Strongylocentrotus purpuratus TaxID=7668 RepID=A0A7M7NQM3_STRPU) HSP 1 Score: 119 bits (297), Expect = 2.570e-26 Identity = 83/284 (29.23%), Postives = 146/284 (51.41%), Query Frame = 1 Query: 19 IVRKVLFMDRSHVYAALAAVNNETYEKQLLRALFHEVPIQENTATRIVLITIS-SLPLQPKEALDILHSLLNTKYPSLLVAGSNQALRFNNPQLADALLKLSIYQPPIAPNMTKLLEQANE---LAIAQWFWQTAVILLIIGAFNPSTVGAYLWKQVPSIRYLMELCLTHTFSDPPVPVTAEEALAEGAAQRDKILFVEQQQTLLQARSDIGKLAVLNAQGGEAPIVTVENSALLSSLMLFPKDPTRLSPVNVPPSAVLKNVEDLTREFHLGDFLSRCRSPDFL 858 +++K++F+D Y + ET ++ LL +L EVP+QE+T R++++ + ++PL EALD++ L+ K ++L + Q L+ L D +L +Y P N+T L Q + LAIA ++W+ ++LLI+ AFNPS +G W P +RY ME+ +T+ F P ++ E ++ + ++Q +L+ + + ++ ++ NS LL+ LM + PV PP +L ++ + HLG L R R+PDFL Sbjct: 596 VIQKLVFLDTHEGYCSKDNWPQET-DRGLLLSLLSEVPVQEDTLMRLLIMGLERTIPLAAGEALDLVDKLV--KRAAVLQSEDFQVLKIERTTLIDVVLNSCVYHHP--ENIT--LPQGYQVPSLAIANFYWKGWILLLIMAAFNPSNIGRAGWDNYPILRYFMEMVMTNNFKFPMATRAKDDKTIEDLKNQELQVAQLEKQAILEFENLLARVQIMEG-----------NSLLLTQLMKLEPN----GPVRRPPIQILDQLQHYNKVLHLGHMLCRSRNPDFL 857
BLAST of mRNA_M-pyrifera_M_contig76972.18141.1 vs. uniprot
Match: UPI001589E1C2 (integrator complex subunit 1 isoform X1 n=3 Tax=Chelonus insularis TaxID=460826 RepID=UPI001589E1C2) HSP 1 Score: 117 bits (292), Expect = 1.170e-25 Identity = 90/286 (31.47%), Postives = 148/286 (51.75%), Query Frame = 1 Query: 4 DHYVGIVRKVLFMDRSHVYAALAAVNNETYEKQLLRALFHEVPIQENTATRIVLI-TISSLPLQPKEALDILHSLLNTKYPSLLVAGSNQALRFNNPQLADALLKLSIYQPPIAPNMTKLLEQANELAIAQWFWQTAVILLIIGAFNPSTVGAYLWKQVPSIRYLMELCLTHTFSDPPVPVTAEEALAEGAAQRDKILFVEQQQTLLQARSDIGKLAVLNAQGGEAPIVTVENSALLSSLMLFPKDPTRLSPVNVPPSAVLKNVEDLTREFHLGDFLSRCRSPDFL 858 + ++ +RKV+ +D Y L ET ++ L + EVP++ENT I+ + + L E +DI+ L+ + S+ + S L+ + Q+ + + KL +YQPP + N+ A +LAI+ +W+ VILLI+ A NP+T+GA WK P +R LME+C+T+ F PP + E + + A+ + +E+Q +L+ S + A ++ NS LLS L+ DPT ++ PP A+L+ ++ L LG L R R PDFL Sbjct: 587 EEFLRGLRKVMLLDPLEHYYKLDNWPPET-DRSLFMRIVTEVPLKENTILTILKMGSCKENGLSQLETMDIIDQLV--RRASINSSESVPMLQAQDLQIIEKIFKLCVYQPPESINIPSGYT-APKLAISNIYWKGWVILLILAAHNPTTIGAVGWKTYPILRTLMEMCITNHFLYPPPTMVLPEIIEQERAKELQTEMIEKQ-VILEYESHL-------AAASSKVQISESNSLLLSQLINL--DPTGIA--RKPPLAILEQIQSLNVAHRLGHLLCRSRKPDFL 856
BLAST of mRNA_M-pyrifera_M_contig76972.18141.1 vs. uniprot
Match: A0A2J7PKD5_9NEOP (Integrator complex subunit 1 n=3 Tax=Cryptotermes secundus TaxID=105785 RepID=A0A2J7PKD5_9NEOP) HSP 1 Score: 115 bits (289), Expect = 2.920e-25 Identity = 90/284 (31.69%), Postives = 144/284 (50.70%), Query Frame = 1 Query: 10 YVGIVRKVLFMDRSHVYAALAAVNNETYEKQLLRALFHEVPIQENTATRIVLITISS-LPLQPKEALDILHSLLNTKYPSLLVAGSNQALRFNNPQLADALLKLSIYQPPIAPNMTKLLEQANELAIAQWFWQTAVILLIIGAFNPSTVGAYLWKQVPSIRYLMELCLTHTFSDPPVPVTAEEALAEGAAQRDKILFVEQQQTLLQARSDIGKLAVLNAQGGEAPIVTVENSALLSSLMLFPKDPTRLSPVNVPPSAVLKNVEDLTREFHLGDFLSRCRSPDFL 858 +V + KVLFM+ Y E ++ L+ L +VP+ +NT RI +I +S PL P + L++ LL K + + S L+ + + D + LS Y P N+ +LAIA +W+ ++LLI+ A NP+T G+ W++ P++R LME+C+T+ F+ PP + E + E A+ +I +E+QQ +L+ S + A +T + S LL+ L+ DPT P PP AVL+ ++ L +G L R R PDFL Sbjct: 603 FVHALHKVLFMEHPEQYYNRDMWPPEN-DRPLMFRLASDVPVLQNTLIRIFVIGLSKDHPLAPPDTLELTDQLL--KRAAAQSSESVPMLQADKLDIIDLVFNLSAYHHPDNINLPAGY-CPPQLAIANLYWKGWIMLLILSAHNPTTFGSVAWEKYPTLRTLMEMCITNHFTYPPPTIAMGEQVEETKAKELQIAALEKQQ-ILEFESYL-------AAASTKQTITEQTSLLLTQLITM--DPT--GPPRKPPQAVLEQLQSLNSTHRMGHLLCRSRHPDFL 870
BLAST of mRNA_M-pyrifera_M_contig76972.18141.1 vs. uniprot
Match: A0A087U8R6_STEMI (Integrator complex subunit 1 (Fragment) n=2 Tax=Stegodyphus TaxID=175340 RepID=A0A087U8R6_STEMI) HSP 1 Score: 115 bits (289), Expect = 2.930e-25 Identity = 89/286 (31.12%), Postives = 138/286 (48.25%), Query Frame = 1 Query: 4 DHYVGIVRKVLFMDRSHVYAALAAVNNETYEKQLLRALFHEVPIQENTATRIVLITIS-SLPLQPKEALDILHSLLNTKYPSLLVAGSNQALRFNNPQLADALLKLSIYQPPIAPNMTKLLEQANELAIAQWFWQTAVILLIIGAFNPSTVGAYLWKQVPSIRYLMELCLTHTFSDPPVPVTAEEALAEGAAQRDKILFVEQQQTLLQARSDIGKLAVLNAQGGEAPIVTVENSALLSSLMLFPKDPTRLSPVNVPPSAVLKNVEDLTREFHLGDFLSRCRSPDFL 858 + ++ + K+LFM++ Y E+ E+ LL L EVP+ E+T TR+++I +S PL +AL++ L+ K ++ L F N +L D + L Y P + + N LAI++ +W+ +LLII NPST G WK P +R LME+C+T+ F PP + E E + ++ +E+ Q LL A +T NS LLS L+ DP P PP+ VL+ ++ + + LGD L R+PDFL Sbjct: 589 NEFIHSIHKLLFMEQIEHYYNKDNWPTES-ERMLLLRLASEVPLLEDTLTRVLIIGLSREHPLTAPDALELADQLI--KRAAMTYCDDFPVLEFENTELCDLIFNLCAYHHPENITLPQGYHPPN-LAISELYWKAWTMLLIIICHNPSTFGDMAWKTYPMLRNLMEMCITNQFIFPPPTLALGEKAEEIKNRELQMSQMEKDQILL--------FETHLAAASTKVTITESNSLLLSKLISM--DPH--GPARKPPAVVLEQLKAMNSKLKLGDLLCHSRNPDFL 858
BLAST of mRNA_M-pyrifera_M_contig76972.18141.1 vs. uniprot
Match: A0A067RUN4_ZOONE (Integrator complex subunit 1 n=2 Tax=Zootermopsis nevadensis TaxID=136037 RepID=A0A067RUN4_ZOONE) HSP 1 Score: 115 bits (289), Expect = 2.930e-25 Identity = 90/284 (31.69%), Postives = 144/284 (50.70%), Query Frame = 1 Query: 10 YVGIVRKVLFMDRSHVYAALAAVNNETYEKQLLRALFHEVPIQENTATRIVLITISS-LPLQPKEALDILHSLLNTKYPSLLVAGSNQALRFNNPQLADALLKLSIYQPPIAPNMTKLLEQANELAIAQWFWQTAVILLIIGAFNPSTVGAYLWKQVPSIRYLMELCLTHTFSDPPVPVTAEEALAEGAAQRDKILFVEQQQTLLQARSDIGKLAVLNAQGGEAPIVTVENSALLSSLMLFPKDPTRLSPVNVPPSAVLKNVEDLTREFHLGDFLSRCRSPDFL 858 +V + KVLFM+ Y E ++ L+ L +VP+ +NT RI +I +S PL P + L++ LL K + + S L+ + + D + LS Y P N+ +LAIA +W+ ++LLI+ A NP+T G+ W++ P++R LME+C+T+ F+ PP + E + E A+ +I +E+QQ +L+ S + A +T + S LL+ L+ DPT P PP AVL+ ++ L +G L R R PDFL Sbjct: 613 FVHALHKVLFMEHPEQYYNRDMWPPEN-DRPLMFRLASDVPVLQNTLIRIFVIGLSKDHPLAPPDTLELTDQLL--KRAAAQSSESLPMLQADKLDIIDLVFNLSAYHHPDNINLPPGY-CPPQLAIANLYWKGWIMLLILSAHNPTTFGSVAWEKYPTLRTLMEMCITNHFTYPPPTIAMGEQVEETKAKELQIAALEKQQ-ILEFESYL-------AAASTKQTITEQTSLLLTQLITM--DPT--GPPRKPPQAVLEQLQSLNSTHRMGHLLCRSRHPDFL 880 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig76972.18141.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig76972.18141.1 >prot_M-pyrifera_M_contig76972.18141.1 ID=prot_M-pyrifera_M_contig76972.18141.1|Name=mRNA_M-pyrifera_M_contig76972.18141.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=286bp SDHYVGIVRKVLFMDRSHVYAALAAVNNETYEKQLLRALFHEVPIQENTAback to top mRNA from alignment at M-pyrifera_M_contig76972:9..1016+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig76972.18141.1 ID=mRNA_M-pyrifera_M_contig76972.18141.1|Name=mRNA_M-pyrifera_M_contig76972.18141.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=1008bp|location=Sequence derived from alignment at M-pyrifera_M_contig76972:9..1016+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig76972:9..1016+ >mRNA_M-pyrifera_M_contig76972.18141.1 ID=mRNA_M-pyrifera_M_contig76972.18141.1|Name=mRNA_M-pyrifera_M_contig76972.18141.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1716bp|location=Sequence derived from alignment at M-pyrifera_M_contig76972:9..1016+ (Macrocystis pyrifera P11B4 male)back to top |