mRNA_M-pyrifera_M_contig76972.18141.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig76972.18141.1
Unique NamemRNA_M-pyrifera_M_contig76972.18141.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig76972.18141.1 vs. uniprot
Match: UPI0003F06B02 (LOW QUALITY PROTEIN: integrator complex subunit 1-like n=1 Tax=Saccoglossus kowalevskii TaxID=10224 RepID=UPI0003F06B02)

HSP 1 Score: 127 bits (318), Expect = 4.330e-29
Identity = 93/292 (31.85%), Postives = 150/292 (51.37%), Query Frame = 1
Query:   10 YVGIVRKVLFMDRSHVYAALAAVNNETY----EKQLLRALFHEVPIQENTATRIVLITIS-SLPLQPKEALDILHSLLNTKYPSLLVAGSNQALRFNNPQLADALLKLSIYQPPIAPNMTKLLE-QANELAIAQWFWQTAVILLIIGAFNPSTVGAYLWKQVPSIRYLMELCLTHTFSDPPVPVTAEEALAEGAAQRDKILFVEQQQTLLQARSDIGKLAVLNAQGGEAPIVTVENSALLSSLMLFPKDPTRLSPVNV---PPSAVLKNVEDLTREFHLGDFLSRCRSPDFL 858
            YV  ++KVLF++++  Y      N + +    E+ LL  L  EVP+QE+T  R+++I +S +LPL P EALD+   L+  K  ++L       L+    QL DA+L L  Y  P   N+T     QA +LAI+  +W+  ++LL++ AFNP  +G   W++ P ++  ME+C+T+ F+ PP  +  +E   E    R+  L   ++Q +L+  S +       A      ++   +S LL+ L       T + P  V   PP  +L+ +  L     +G  L R RSPDFL
Sbjct:  608 YVHCLQKVLFLEQNETY-----YNKDNWPPESERSLLLRLTAEVPVQEDTLMRVLVIGLSKNLPLTPAEALDMADKLV--KRAAVLYTPDFSVLKVERCQLMDAVLNLCGYHHP--ENITLPAGYQAPQLAISNLYWKGWLLLLLVSAFNPKNIGHKSWEEYPMLKCFMEMCMTNNFNFPPSTMAPDERTTEELKARELQLAQIEKQDILEFESHL-------AAASTRMLIDESSSLLLAQL-------TSMDPHGVARKPPPHILEQLRSLNNTIKMGTLLCRSRSPDFL 876          
BLAST of mRNA_M-pyrifera_M_contig76972.18141.1 vs. uniprot
Match: UPI001BB1E49D (integrator complex subunit 1-like n=1 Tax=Lytechinus variegatus TaxID=7654 RepID=UPI001BB1E49D)

HSP 1 Score: 122 bits (305), Expect = 2.250e-27
Identity = 85/284 (29.93%), Postives = 146/284 (51.41%), Query Frame = 1
Query:   19 IVRKVLFMDRSHVYAALAAVNNETYEKQLLRALFHEVPIQENTATRIVLITIS-SLPLQPKEALDILHSLLNTKYPSLLVAGSNQALRFNNPQLADALLKLSIYQPPIAPNMTKLLEQANE---LAIAQWFWQTAVILLIIGAFNPSTVGAYLWKQVPSIRYLMELCLTHTFSDPPVPVTAEEALAEGAAQRDKILFVEQQQTLLQARSDIGKLAVLNAQGGEAPIVTVENSALLSSLMLFPKDPTRLSPVNVPPSAVLKNVEDLTREFHLGDFLSRCRSPDFL 858
            +++K++F+D    Y +      ET ++ LL +L  EVP+QE+T  R++++ +  ++PL   EALD++  L+  K  ++L +   Q L+     L D +L   +Y  P   N+T  L Q  +   LAIA ++W+  ++LLI+ AFNPS +G   W   P +RY ME+ +T+ F  P      +E  AE     +  +   ++Q +L+  + + ++ ++             NS LL+ LM    +     PV  PP  +L  ++   +  HLG  L R R+PDFL
Sbjct:  595 VIQKLVFLDTHEGYCSKDNWPPET-DRGLLLSLLSEVPVQEDTLMRLLIMGLERTIPLAAGEALDLVDKLV--KRAAVLQSEDFQVLKIERTTLIDVVLNSCVYHHP--ENIT--LPQGYQVPSLAIANFYWKGWILLLILAAFNPSNIGRVGWDNYPILRYFMEMVMTNNFKFPMATRAKDEKTAEELKNMELQVAQLEKQAILEFENHLARVQIMEG-----------NSLLLTQLMRMEPN----GPVRRPPIQILDQLQHYNKVLHLGHMLCRSRNPDFL 856          
BLAST of mRNA_M-pyrifera_M_contig76972.18141.1 vs. uniprot
Match: UPI0018D92D03 (integrator complex subunit 1-like n=2 Tax=Patiria miniata TaxID=46514 RepID=UPI0018D92D03)

HSP 1 Score: 120 bits (300), Expect = 1.030e-26
Identity = 84/280 (30.00%), Postives = 147/280 (52.50%), Query Frame = 1
Query:   22 VRKVLFMDRSHVYAALAAVNNETYEKQLLRALFHEVPIQENTATRIVLITIS-SLPLQPKEALDILHSLLNTKYPSLLVAGSNQALRFNNPQLADALLKLSIYQPPIAPNMTKLLEQANELAIAQWFWQTAVILLIIGAFNPSTVGAYLWKQVPSIRYLMELCLTHTFSDPPVPVTAEEALAEGAAQRDKILFVEQQQTLLQARSDIGKLAVLNAQGGEAPIVTVENSALLSSLMLFPKDPTRLSPVNVPPSAVLKNVEDLTREFHLGDFLSRCRSPDFL 858
            ++KVLFM+ S  Y +      E+ ++ LL +L  EVP+QE+T  R++++ +S  LPL   + L++   L+  K  ++L A     L+    QL DA+L L  Y  P    + +     + LAI+  +W+  ++L++I AFNP+ +G   W++ P +R  ME+ +T+ F  PP     +E   E    R+  +   ++Q +L+  + + ++A+  A           NS LLS ++    DP  ++    PP+ VL+ ++   +  +LG  L R RSPDFL
Sbjct:  598 LQKVLFMEPSESYCSKDNWPPES-DRSLLLSLLSEVPVQEDTLMRVLVMGLSRELPLTAADGLELADKLV--KRAAVLYAEDFPVLKVERIQLIDAVLNLCAYHHPENIQLPQGYSPPS-LAISNLYWKGWILLVVITAFNPTNIGLSAWERYPMLRCFMEMVMTNNFKYPPPTAAPDERSQEEVRTRELQVIALEKQEILEFENHLARVAITEA-----------NSLLLSQVIRM--DPNGIA--RRPPAQVLEQLQHFNKVLNLGHMLCRSRSPDFL 858          
BLAST of mRNA_M-pyrifera_M_contig76972.18141.1 vs. uniprot
Match: UPI001455220A (integrator complex subunit 1-like n=1 Tax=Asterias rubens TaxID=7604 RepID=UPI001455220A)

HSP 1 Score: 120 bits (300), Expect = 1.030e-26
Identity = 84/280 (30.00%), Postives = 145/280 (51.79%), Query Frame = 1
Query:   22 VRKVLFMDRSHVYAALAAVNNETYEKQLLRALFHEVPIQENTATRIVLITIS-SLPLQPKEALDILHSLLNTKYPSLLVAGSNQALRFNNPQLADALLKLSIYQPPIAPNMTKLLEQANELAIAQWFWQTAVILLIIGAFNPSTVGAYLWKQVPSIRYLMELCLTHTFSDPPVPVTAEEALAEGAAQRDKILFVEQQQTLLQARSDIGKLAVLNAQGGEAPIVTVENSALLSSLMLFPKDPTRLSPVNVPPSAVLKNVEDLTREFHLGDFLSRCRSPDFL 858
            ++KV+F++ S  Y +      E  ++ LL +L  EVP+QE+T  R++++ +S  L L   + L++   L+  K  ++L A     L+    QL DA+L L  Y  P    + +     N LAI+  +W+  ++L++I AFNP+ +G   W+Q P +R  ME+ +T+ F  PP     +E   E    R+  +   ++Q +L+  + + ++A+           T  NS LLS ++    DP  ++    PPS VL  +++  +  +LG  L R RSPDFL
Sbjct:  620 LQKVVFLEPSESYCSKDNWPPEA-DRSLLLSLLSEVPVQEDTLMRVLVMGLSRELSLSAGDGLELADKLV--KRAAVLYADDFPVLKVERVQLVDAVLNLCSYHHPENIQLPQGYSPPN-LAISNLYWKAWILLVVITAFNPTNIGLTAWEQYPMLRCFMEMVMTNNFKYPPPTAAPDERSQEETRARELQVIALEKQEILEFENHLARVAI-----------TESNSLLLSQVIRM--DPNGIA--RRPPSHVLDQLKEFNKVLNLGHMLCRSRSPDFL 880          
BLAST of mRNA_M-pyrifera_M_contig76972.18141.1 vs. uniprot
Match: A0A6V7JV17_9HYME (DUF3677 domain-containing protein (Fragment) n=1 Tax=Bracon brevicornis TaxID=1563983 RepID=A0A6V7JV17_9HYME)

HSP 1 Score: 119 bits (298), Expect = 1.880e-26
Identity = 86/282 (30.50%), Postives = 141/282 (50.00%), Query Frame = 1
Query:   16 GIVRKVLFMDRSHVYAALAAVNNETYEKQLLRALFHEVPIQENTATRIVLITISS-LPLQPKEALDILHSLLNTKYPSLLVAGSNQALRFNNPQLADALLKLSIYQPPIAPNMTKLLEQANELAIAQWFWQTAVILLIIGAFNPSTVGAYLWKQVPSIRYLMELCLTHTFSDPPVPVTAEEALAEGAAQRDKILFVEQQQTLLQARSDIGKLAVLNAQGGEAPIVTVENSALLSSLMLFPKDPTRLSPVNVPPSAVLKNVEDLTREFHLGDFLSRCRSPDFL 858
            G V+K++F+D    Y  +     ET     LR +  +VP+QE T  R++L+  S  + L P E +++   L+  K  +     +   L+    ++ + +  L  YQPP   N+       + LAI+  +W+  ++LLI+GA NPST+GA  W++ P  R  ME+C+T+ F  PP  +   E + +  A+  +I  +E+Q+ L        +  V  A G     ++  NS LLS L+    DPT +     PP A+++ ++ L     LG  L R R PDFL
Sbjct:  535 GAVQKIMFLDTLEHYCKIDNWPPETDRVLFLRTV-SDVPLQETTLVRLLLMGFSKEMGLAPSEVMEVADQLV--KKAAANTTETVPGLQITKVEIIELIFNLVTYQPPSTINIPAGYVPPS-LAISALYWKGWIMLLILGAHNPSTIGAIGWQKYPIWRMFMEMCITNHFQYPPPTMALPEVIEQEKARELQIEALERQEIL--------EYEVHLAAGSTRTPISETNSLLLSQLITM--DPTGMP--RRPPPAIIEQLQSLNTSLRLGHLLCRSRKPDFL 800          
BLAST of mRNA_M-pyrifera_M_contig76972.18141.1 vs. uniprot
Match: A0A7M7NQM3_STRPU (DUF3677 domain-containing protein n=2 Tax=Strongylocentrotus purpuratus TaxID=7668 RepID=A0A7M7NQM3_STRPU)

HSP 1 Score: 119 bits (297), Expect = 2.570e-26
Identity = 83/284 (29.23%), Postives = 146/284 (51.41%), Query Frame = 1
Query:   19 IVRKVLFMDRSHVYAALAAVNNETYEKQLLRALFHEVPIQENTATRIVLITIS-SLPLQPKEALDILHSLLNTKYPSLLVAGSNQALRFNNPQLADALLKLSIYQPPIAPNMTKLLEQANE---LAIAQWFWQTAVILLIIGAFNPSTVGAYLWKQVPSIRYLMELCLTHTFSDPPVPVTAEEALAEGAAQRDKILFVEQQQTLLQARSDIGKLAVLNAQGGEAPIVTVENSALLSSLMLFPKDPTRLSPVNVPPSAVLKNVEDLTREFHLGDFLSRCRSPDFL 858
            +++K++F+D    Y +      ET ++ LL +L  EVP+QE+T  R++++ +  ++PL   EALD++  L+  K  ++L +   Q L+     L D +L   +Y  P   N+T  L Q  +   LAIA ++W+  ++LLI+ AFNPS +G   W   P +RY ME+ +T+ F  P      ++   E    ++  +   ++Q +L+  + + ++ ++             NS LL+ LM    +     PV  PP  +L  ++   +  HLG  L R R+PDFL
Sbjct:  596 VIQKLVFLDTHEGYCSKDNWPQET-DRGLLLSLLSEVPVQEDTLMRLLIMGLERTIPLAAGEALDLVDKLV--KRAAVLQSEDFQVLKIERTTLIDVVLNSCVYHHP--ENIT--LPQGYQVPSLAIANFYWKGWILLLIMAAFNPSNIGRAGWDNYPILRYFMEMVMTNNFKFPMATRAKDDKTIEDLKNQELQVAQLEKQAILEFENLLARVQIMEG-----------NSLLLTQLMKLEPN----GPVRRPPIQILDQLQHYNKVLHLGHMLCRSRNPDFL 857          
BLAST of mRNA_M-pyrifera_M_contig76972.18141.1 vs. uniprot
Match: UPI001589E1C2 (integrator complex subunit 1 isoform X1 n=3 Tax=Chelonus insularis TaxID=460826 RepID=UPI001589E1C2)

HSP 1 Score: 117 bits (292), Expect = 1.170e-25
Identity = 90/286 (31.47%), Postives = 148/286 (51.75%), Query Frame = 1
Query:    4 DHYVGIVRKVLFMDRSHVYAALAAVNNETYEKQLLRALFHEVPIQENTATRIVLI-TISSLPLQPKEALDILHSLLNTKYPSLLVAGSNQALRFNNPQLADALLKLSIYQPPIAPNMTKLLEQANELAIAQWFWQTAVILLIIGAFNPSTVGAYLWKQVPSIRYLMELCLTHTFSDPPVPVTAEEALAEGAAQRDKILFVEQQQTLLQARSDIGKLAVLNAQGGEAPIVTVENSALLSSLMLFPKDPTRLSPVNVPPSAVLKNVEDLTREFHLGDFLSRCRSPDFL 858
            + ++  +RKV+ +D    Y  L     ET ++ L   +  EVP++ENT   I+ + +     L   E +DI+  L+  +  S+  + S   L+  + Q+ + + KL +YQPP + N+      A +LAI+  +W+  VILLI+ A NP+T+GA  WK  P +R LME+C+T+ F  PP  +   E + +  A+  +   +E+Q  +L+  S +       A       ++  NS LLS L+    DPT ++    PP A+L+ ++ L     LG  L R R PDFL
Sbjct:  587 EEFLRGLRKVMLLDPLEHYYKLDNWPPET-DRSLFMRIVTEVPLKENTILTILKMGSCKENGLSQLETMDIIDQLV--RRASINSSESVPMLQAQDLQIIEKIFKLCVYQPPESINIPSGYT-APKLAISNIYWKGWVILLILAAHNPTTIGAVGWKTYPILRTLMEMCITNHFLYPPPTMVLPEIIEQERAKELQTEMIEKQ-VILEYESHL-------AAASSKVQISESNSLLLSQLINL--DPTGIA--RKPPLAILEQIQSLNVAHRLGHLLCRSRKPDFL 856          
BLAST of mRNA_M-pyrifera_M_contig76972.18141.1 vs. uniprot
Match: A0A2J7PKD5_9NEOP (Integrator complex subunit 1 n=3 Tax=Cryptotermes secundus TaxID=105785 RepID=A0A2J7PKD5_9NEOP)

HSP 1 Score: 115 bits (289), Expect = 2.920e-25
Identity = 90/284 (31.69%), Postives = 144/284 (50.70%), Query Frame = 1
Query:   10 YVGIVRKVLFMDRSHVYAALAAVNNETYEKQLLRALFHEVPIQENTATRIVLITISS-LPLQPKEALDILHSLLNTKYPSLLVAGSNQALRFNNPQLADALLKLSIYQPPIAPNMTKLLEQANELAIAQWFWQTAVILLIIGAFNPSTVGAYLWKQVPSIRYLMELCLTHTFSDPPVPVTAEEALAEGAAQRDKILFVEQQQTLLQARSDIGKLAVLNAQGGEAPIVTVENSALLSSLMLFPKDPTRLSPVNVPPSAVLKNVEDLTREFHLGDFLSRCRSPDFL 858
            +V  + KVLFM+    Y        E  ++ L+  L  +VP+ +NT  RI +I +S   PL P + L++   LL  K  +   + S   L+ +   + D +  LS Y  P   N+        +LAIA  +W+  ++LLI+ A NP+T G+  W++ P++R LME+C+T+ F+ PP  +   E + E  A+  +I  +E+QQ +L+  S +       A       +T + S LL+ L+    DPT   P   PP AVL+ ++ L     +G  L R R PDFL
Sbjct:  603 FVHALHKVLFMEHPEQYYNRDMWPPEN-DRPLMFRLASDVPVLQNTLIRIFVIGLSKDHPLAPPDTLELTDQLL--KRAAAQSSESVPMLQADKLDIIDLVFNLSAYHHPDNINLPAGY-CPPQLAIANLYWKGWIMLLILSAHNPTTFGSVAWEKYPTLRTLMEMCITNHFTYPPPTIAMGEQVEETKAKELQIAALEKQQ-ILEFESYL-------AAASTKQTITEQTSLLLTQLITM--DPT--GPPRKPPQAVLEQLQSLNSTHRMGHLLCRSRHPDFL 870          
BLAST of mRNA_M-pyrifera_M_contig76972.18141.1 vs. uniprot
Match: A0A087U8R6_STEMI (Integrator complex subunit 1 (Fragment) n=2 Tax=Stegodyphus TaxID=175340 RepID=A0A087U8R6_STEMI)

HSP 1 Score: 115 bits (289), Expect = 2.930e-25
Identity = 89/286 (31.12%), Postives = 138/286 (48.25%), Query Frame = 1
Query:    4 DHYVGIVRKVLFMDRSHVYAALAAVNNETYEKQLLRALFHEVPIQENTATRIVLITIS-SLPLQPKEALDILHSLLNTKYPSLLVAGSNQALRFNNPQLADALLKLSIYQPPIAPNMTKLLEQANELAIAQWFWQTAVILLIIGAFNPSTVGAYLWKQVPSIRYLMELCLTHTFSDPPVPVTAEEALAEGAAQRDKILFVEQQQTLLQARSDIGKLAVLNAQGGEAPIVTVENSALLSSLMLFPKDPTRLSPVNVPPSAVLKNVEDLTREFHLGDFLSRCRSPDFL 858
            + ++  + K+LFM++   Y        E+ E+ LL  L  EVP+ E+T TR+++I +S   PL   +AL++   L+  K  ++        L F N +L D +  L  Y  P    + +     N LAI++ +W+   +LLII   NPST G   WK  P +R LME+C+T+ F  PP  +   E   E   +  ++  +E+ Q LL             A       +T  NS LLS L+    DP    P   PP+ VL+ ++ +  +  LGD L   R+PDFL
Sbjct:  589 NEFIHSIHKLLFMEQIEHYYNKDNWPTES-ERMLLLRLASEVPLLEDTLTRVLIIGLSREHPLTAPDALELADQLI--KRAAMTYCDDFPVLEFENTELCDLIFNLCAYHHPENITLPQGYHPPN-LAISELYWKAWTMLLIIICHNPSTFGDMAWKTYPMLRNLMEMCITNQFIFPPPTLALGEKAEEIKNRELQMSQMEKDQILL--------FETHLAAASTKVTITESNSLLLSKLISM--DPH--GPARKPPAVVLEQLKAMNSKLKLGDLLCHSRNPDFL 858          
BLAST of mRNA_M-pyrifera_M_contig76972.18141.1 vs. uniprot
Match: A0A067RUN4_ZOONE (Integrator complex subunit 1 n=2 Tax=Zootermopsis nevadensis TaxID=136037 RepID=A0A067RUN4_ZOONE)

HSP 1 Score: 115 bits (289), Expect = 2.930e-25
Identity = 90/284 (31.69%), Postives = 144/284 (50.70%), Query Frame = 1
Query:   10 YVGIVRKVLFMDRSHVYAALAAVNNETYEKQLLRALFHEVPIQENTATRIVLITISS-LPLQPKEALDILHSLLNTKYPSLLVAGSNQALRFNNPQLADALLKLSIYQPPIAPNMTKLLEQANELAIAQWFWQTAVILLIIGAFNPSTVGAYLWKQVPSIRYLMELCLTHTFSDPPVPVTAEEALAEGAAQRDKILFVEQQQTLLQARSDIGKLAVLNAQGGEAPIVTVENSALLSSLMLFPKDPTRLSPVNVPPSAVLKNVEDLTREFHLGDFLSRCRSPDFL 858
            +V  + KVLFM+    Y        E  ++ L+  L  +VP+ +NT  RI +I +S   PL P + L++   LL  K  +   + S   L+ +   + D +  LS Y  P   N+        +LAIA  +W+  ++LLI+ A NP+T G+  W++ P++R LME+C+T+ F+ PP  +   E + E  A+  +I  +E+QQ +L+  S +       A       +T + S LL+ L+    DPT   P   PP AVL+ ++ L     +G  L R R PDFL
Sbjct:  613 FVHALHKVLFMEHPEQYYNRDMWPPEN-DRPLMFRLASDVPVLQNTLIRIFVIGLSKDHPLAPPDTLELTDQLL--KRAAAQSSESLPMLQADKLDIIDLVFNLSAYHHPDNINLPPGY-CPPQLAIANLYWKGWIMLLILSAHNPTTFGSVAWEKYPTLRTLMEMCITNHFTYPPPTIAMGEQVEETKAKELQIAALEKQQ-ILEFESYL-------AAASTKQTITEQTSLLLTQLITM--DPT--GPPRKPPQAVLEQLQSLNSTHRMGHLLCRSRHPDFL 880          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig76972.18141.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI0003F06B024.330e-2931.85LOW QUALITY PROTEIN: integrator complex subunit 1-... [more]
UPI001BB1E49D2.250e-2729.93integrator complex subunit 1-like n=1 Tax=Lytechin... [more]
UPI0018D92D031.030e-2630.00integrator complex subunit 1-like n=2 Tax=Patiria ... [more]
UPI001455220A1.030e-2630.00integrator complex subunit 1-like n=1 Tax=Asterias... [more]
A0A6V7JV17_9HYME1.880e-2630.50DUF3677 domain-containing protein (Fragment) n=1 T... [more]
A0A7M7NQM3_STRPU2.570e-2629.23DUF3677 domain-containing protein n=2 Tax=Strongyl... [more]
UPI001589E1C21.170e-2531.47integrator complex subunit 1 isoform X1 n=3 Tax=Ch... [more]
A0A2J7PKD5_9NEOP2.920e-2531.69Integrator complex subunit 1 n=3 Tax=Cryptotermes ... [more]
A0A087U8R6_STEMI2.930e-2531.12Integrator complex subunit 1 (Fragment) n=2 Tax=St... [more]
A0A067RUN4_ZOONE2.930e-2531.69Integrator complex subunit 1 n=2 Tax=Zootermopsis ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig76972contigM-pyrifera_M_contig76972:9..1016 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeMetazoa
Seed ortholog score129.0
Seed ortholog evalue3.5e-27
Seed eggNOG ortholog10224.XP_006812097.1
Preferred nameINTS1
KEGG koko:K13138
Hectar predicted targeting categoryother localisation
GOsGO:0000428,GO:0001701,GO:0001824,GO:0001832,GO:0001833,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0006139,GO:0006351,GO:0006366,GO:0006396,GO:0006725,GO:0006807,GO:0007275,GO:0008150,GO:0008152,GO:0008283,GO:0009058,GO:0009059,GO:0009301,GO:0009790,GO:0009792,GO:0009892,GO:0009987,GO:0010466,GO:0010467,GO:0010605,GO:0010941,GO:0010951,GO:0016070,GO:0016073,GO:0016180,GO:0016591,GO:0018130,GO:0019222,GO:0019438,GO:0030162,GO:0030880,GO:0031123,GO:0031323,GO:0031324,GO:0031974,GO:0031981,GO:0032039,GO:0032268,GO:0032269,GO:0032501,GO:0032502,GO:0032774,GO:0032991,GO:0034470,GO:0034472,GO:0034474,GO:0034641,GO:0034645,GO:0034654,GO:0034660,GO:0040007,GO:0042795,GO:0042981,GO:0043009,GO:0043066,GO:0043067,GO:0043069,GO:0043086,GO:0043154,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043281,GO:0043628,GO:0044092,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044451,GO:0044464,GO:0045861,GO:0046483,GO:0048519,GO:0048523,GO:0048589,GO:0048856,GO:0050789,GO:0050790,GO:0050794,GO:0051171,GO:0051172,GO:0051246,GO:0051248,GO:0051336,GO:0051346,GO:0052547,GO:0052548,GO:0055029,GO:0060255,GO:0060548,GO:0061695,GO:0065007,GO:0065009,GO:0070013,GO:0071704,GO:0080090,GO:0090304,GO:0097659,GO:0098781,GO:1901360,GO:1901362,GO:1901576,GO:1902494,GO:1990234,GO:2000116,GO:2000117
EggNOG free text desc.Integrator complex subunit 1
EggNOG OGs38CPI@33154,3BGWJ@33208,3CTV0@33213,KOG4596@1,KOG4596@2759
COG Functional cat.S
Best tax levelBilateria
Best eggNOG OGNA|NA|NA
BRITEko00000,ko03041
Exons4
Model size858
Cds size858
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig76972.18141.1prot_M-pyrifera_M_contig76972.18141.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig76972 9..1016 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816669.8309643-CDS-M-pyrifera_M_contig76972:8..2331622816669.8309643-CDS-M-pyrifera_M_contig76972:8..233Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig76972 9..233 +
1692278109.3170702-CDS-M-pyrifera_M_contig76972:8..2331692278109.3170702-CDS-M-pyrifera_M_contig76972:8..233Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig76972 9..233 +
1622816669.841446-CDS-M-pyrifera_M_contig76972:316..5111622816669.841446-CDS-M-pyrifera_M_contig76972:316..511Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig76972 317..511 +
1692278109.3314073-CDS-M-pyrifera_M_contig76972:316..5111692278109.3314073-CDS-M-pyrifera_M_contig76972:316..511Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig76972 317..511 +
1622816669.854441-CDS-M-pyrifera_M_contig76972:565..7541622816669.854441-CDS-M-pyrifera_M_contig76972:565..754Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig76972 566..754 +
1692278109.3466651-CDS-M-pyrifera_M_contig76972:565..7541692278109.3466651-CDS-M-pyrifera_M_contig76972:565..754Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig76972 566..754 +
1622816669.9311335-CDS-M-pyrifera_M_contig76972:767..10161622816669.9311335-CDS-M-pyrifera_M_contig76972:767..1016Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig76972 768..1016 +
1692278109.3585298-CDS-M-pyrifera_M_contig76972:767..10161692278109.3585298-CDS-M-pyrifera_M_contig76972:767..1016Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig76972 768..1016 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig76972.18141.1

>prot_M-pyrifera_M_contig76972.18141.1 ID=prot_M-pyrifera_M_contig76972.18141.1|Name=mRNA_M-pyrifera_M_contig76972.18141.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=286bp
SDHYVGIVRKVLFMDRSHVYAALAAVNNETYEKQLLRALFHEVPIQENTA
TRIVLITISSLPLQPKEALDILHSLLNTKYPSLLVAGSNQALRFNNPQLA
DALLKLSIYQPPIAPNMTKLLEQANELAIAQWFWQTAVILLIIGAFNPST
VGAYLWKQVPSIRYLMELCLTHTFSDPPVPVTAEEALAEGAAQRDKILFV
EQQQTLLQARSDIGKLAVLNAQGGEAPIVTVENSALLSSLMLFPKDPTRL
SPVNVPPSAVLKNVEDLTREFHLGDFLSRCRSPDFL
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mRNA from alignment at M-pyrifera_M_contig76972:9..1016+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig76972.18141.1 ID=mRNA_M-pyrifera_M_contig76972.18141.1|Name=mRNA_M-pyrifera_M_contig76972.18141.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=1008bp|location=Sequence derived from alignment at M-pyrifera_M_contig76972:9..1016+ (Macrocystis pyrifera P11B4 male)
TCTGATCACTACGTTGGCATCGTAAGGAAGGTGCTCTTCATGGACAGGTC TCATGTGTACGCCGCCCTGGCTGCAGTCAACAACGAAACCTACGAGAAGC AGCTCTTGCGAGCCCTTTTCCACGAGGTGCCCATTCAAGAGAACACTGCC ACGCGCATTGTGCTCATCACCATCAGTTCACTTCCACTGCAGCCCAAGGA AGCCCTTGACATTCTCCATTCTCTTGTGTACAGGTAAGCGCTTTGCTACT CGCACAATTGGCACATTGTACTGACAACATTGGTAGGGCTGCGAAGTTGC AGGCGAAGCTCAACACCAAGTACCCTTCGCTTTTGGTGGCTGGGTCGAAC CAGGCGTTGCGGTTCAACAACCCCCAGCTGGCAGATGCCCTGCTGAAGCT CTCCATCTACCAGCCACCGATTGCTCCCAACATGACCAAGCTGCTGGAGC AAGCCAACGAGCTAGCCATTGCTCAGTGGTTCTGGCAAACGGCAGTGATC TTGGTTTGTGTCTCCTCTCCGCGCAGTGGTGTTTATGGCGGCTGACGAGA ACGTAAGCTCATCATTGGAGCCTTCAACCCGAGCACAGTGGGAGCGTACC TTTGGAAACAGGTTCCTTCTATTCGCTACCTGATGGAGCTGTGCCTCACC CACACCTTCAGCGACCCTCCTGTGCCAGTCACCGCTGAGGAAGCGCTTGC AGAGGGTGCAGCGCAACGAGACAAGATCCTCTTCGTCGAACAACAGGTAC GTGTCATAGCAGACGCTGCTACAGGCTCGCTCTGACATTGGCAAGCTTGC GGTGCTTAACGCCCAGGGAGGAGAGGCTCCGATTGTGACTGTGGAGAACT CGGCTCTCTTGAGCTCTCTCATGCTGTTCCCAAAGGACCCGACCCGCCTC TCCCCCGTGAACGTCCCACCATCTGCTGTTCTGAAGAATGTTGAGGACCT CACAAGGGAGTTCCACTTGGGCGACTTCCTCTCAAGGTGCCGCTCTCCAG ACTTCCTG
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig76972:9..1016+

>mRNA_M-pyrifera_M_contig76972.18141.1 ID=mRNA_M-pyrifera_M_contig76972.18141.1|Name=mRNA_M-pyrifera_M_contig76972.18141.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1716bp|location=Sequence derived from alignment at M-pyrifera_M_contig76972:9..1016+ (Macrocystis pyrifera P11B4 male)
TCTGATCACTACGTTGGCATCGTAAGGAAGGTGCTCTTCATGGACAGGTC
TCATGTGTACGCCGCCCTGGCTGCAGTCAACAACGAAACCTACGAGAAGC
AGCTCTTGCGAGCCCTTTTCCACGAGGTGCCCATTCAAGAGAACACTGCC
ACGCGCATTGTGCTCATCACCATCAGTTCACTTCCACTGCAGCCCAAGGA
AGCCCTTGACATTCTCCATTCTCTTTCTGATCACTACGTTGGCATCGTAA
GGAAGGTGCTCTTCATGGACAGGTCTCATGTGTACGCCGCCCTGGCTGCA
GTCAACAACGAAACCTACGAGAAGCAGCTCTTGCGAGCCCTTTTCCACGA
GGTGCCCATTCAAGAGAACACTGCCACGCGCATTGTGCTCATCACCATCA
GTTCACTTCCACTGCAGCCCAAGGAAGCCCTTGACATTCTCCATTCTCTT
CTCAACACCAAGTACCCTTCGCTTTTGGTGGCTGGGTCGAACCAGGCGTT
GCGGTTCAACAACCCCCAGCTGGCAGATGCCCTGCTGAAGCTCTCCATCT
ACCAGCCACCGATTGCTCCCAACATGACCAAGCTGCTGGAGCAAGCCAAC
GAGCTAGCCATTGCTCAGTGGTTCTGGCAAACGGCAGTGATCTTGCTCAA
CACCAAGTACCCTTCGCTTTTGGTGGCTGGGTCGAACCAGGCGTTGCGGT
TCAACAACCCCCAGCTGGCAGATGCCCTGCTGAAGCTCTCCATCTACCAG
CCACCGATTGCTCCCAACATGACCAAGCTGCTGGAGCAAGCCAACGAGCT
AGCCATTGCTCAGTGGTTCTGGCAAACGGCAGTGATCTTGCTCATCATTG
GAGCCTTCAACCCGAGCACAGTGGGAGCGTACCTTTGGAAACAGGTTCCT
TCTATTCGCTACCTGATGGAGCTGTGCCTCACCCACACCTTCAGCGACCC
TCCTGTGCCAGTCACCGCTGAGGAAGCGCTTGCAGAGGGTGCAGCGCAAC
GAGACAAGATCCTCTTCGTCGAACAACAGCTCATCATTGGAGCCTTCAAC
CCGAGCACAGTGGGAGCGTACCTTTGGAAACAGGTTCCTTCTATTCGCTA
CCTGATGGAGCTGTGCCTCACCCACACCTTCAGCGACCCTCCTGTGCCAG
TCACCGCTGAGGAAGCGCTTGCAGAGGGTGCAGCGCAACGAGACAAGATC
CTCTTCGTCGAACAACAGCAGACGCTGCTACAGGCTCGCTCTGACATTGG
CAAGCTTGCGGTGCTTAACGCCCAGGGAGGAGAGGCTCCGATTGTGACTG
TGGAGAACTCGGCTCTCTTGAGCTCTCTCATGCTGTTCCCAAAGGACCCG
ACCCGCCTCTCCCCCGTGAACGTCCCACCATCTGCTGTTCTGAAGAATGT
TGAGGACCTCACAAGGGAGTTCCACTTGGGCGACTTCCTCTCAAGGTGCC
GCTCTCCAGACTTCCTGCAGACGCTGCTACAGGCTCGCTCTGACATTGGC
AAGCTTGCGGTGCTTAACGCCCAGGGAGGAGAGGCTCCGATTGTGACTGT
GGAGAACTCGGCTCTCTTGAGCTCTCTCATGCTGTTCCCAAAGGACCCGA
CCCGCCTCTCCCCCGTGAACGTCCCACCATCTGCTGTTCTGAAGAATGTT
GAGGACCTCACAAGGGAGTTCCACTTGGGCGACTTCCTCTCAAGGTGCCG
CTCTCCAGACTTCCTG
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